NHAM_RS18425 57631f58af0e53d43c6cd848903935c0 344 Gene3D G3DSA:3.40.50.720 1 142 5.4E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS18425 57631f58af0e53d43c6cd848903935c0 344 PIRSF PIRSF000148 2 337 1.9E-125 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NHAM_RS18425 57631f58af0e53d43c6cd848903935c0 344 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 332 36.284 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NHAM_RS18425 57631f58af0e53d43c6cd848903935c0 344 SUPERFAMILY SSF55347 129 319 4.09E-74 T 22-04-2016 NHAM_RS18425 57631f58af0e53d43c6cd848903935c0 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 318 1.4E-53 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS18425 57631f58af0e53d43c6cd848903935c0 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 117 1.6E-31 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NHAM_RS18425 57631f58af0e53d43c6cd848903935c0 344 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 333 1.4E-141 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NHAM_RS18425 57631f58af0e53d43c6cd848903935c0 344 SUPERFAMILY SSF51735 3 157 6.58E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS18425 57631f58af0e53d43c6cd848903935c0 344 Gene3D G3DSA:3.30.360.10 143 314 7.7E-79 T 22-04-2016 NHAM_RS18425 57631f58af0e53d43c6cd848903935c0 344 PANTHER PTHR10174 66 340 2.8E-76 T 22-04-2016 NHAM_RS18425 57631f58af0e53d43c6cd848903935c0 344 PANTHER PTHR10174:SF2 66 340 2.8E-76 T 22-04-2016 NHAM_RS18425 57631f58af0e53d43c6cd848903935c0 344 SMART SM00859 4 119 1.7E-39 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 SUPERFAMILY SSF82866 292 493 1.57E-46 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 SUPERFAMILY SSF82714 185 267 6.67E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 SUPERFAMILY SSF82693 558 652 2.27E-16 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 PANTHER PTHR32063 3 1035 0.0 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 Gene3D G3DSA:1.10.3850.10 278 494 4.0E-55 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 Gene3D G3DSA:1.10.3850.10 800 1017 2.3E-52 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 SUPERFAMILY SSF82866 821 1015 8.5E-43 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 SUPERFAMILY SSF82693 668 706 3.3E-9 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 Pfam PF00873 AcrB/AcrD/AcrF family 7 1015 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 PANTHER PTHR32063:SF30 3 1035 0.0 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 Gene3D G3DSA:3.30.70.1430 561 648 1.9E-11 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 SUPERFAMILY SSF82714 709 791 7.32E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 Gene3D G3DSA:3.30.70.1430 42 143 1.3E-30 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 7.1E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 7.1E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 7.1E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 7.1E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.1E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 7.1E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.1E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 7.1E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 7.1E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 SUPERFAMILY SSF82693 139 184 3.5E-20 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 SUPERFAMILY SSF82693 270 326 3.5E-20 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 SUPERFAMILY SSF82693 42 135 2.09E-24 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 SUPERFAMILY SSF82693 795 839 3.3E-9 T 22-04-2016 NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 Gene3D G3DSA:3.30.2090.10 709 790 1.6E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS07725 7dd6e6b24a96c3490e04bc5039ae6e63 1048 Gene3D G3DSA:3.30.2090.10 184 266 1.6E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 181 3.1E-64 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 PIRSF PIRSF500134 1 433 1.4E-176 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 Gene3D G3DSA:3.40.50.720 1 203 6.6E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 SMART SM00984 316 417 2.4E-51 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 Gene3D G3DSA:1.20.5.100 204 230 3.6E-19 T 22-04-2016 NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 PANTHER PTHR11374 1 432 4.6E-230 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 Gene3D G3DSA:3.40.50.720 231 433 8.1E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 200 292 2.8E-37 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 SUPERFAMILY SSF52413 306 427 1.44E-38 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 413 1.5E-134 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 SUPERFAMILY SSF48179 200 293 5.44E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 SUPERFAMILY SSF51735 1 204 1.91E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 316 416 6.4E-33 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 PIRSF PIRSF000124 1 432 2.0E-140 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NHAM_RS05385 dda035f90d0ee09077350f5bf4e6de0a 433 PANTHER PTHR11374:SF18 1 432 4.6E-230 T 22-04-2016 NHAM_RS00015 e77a0ac0f065fe065245eecbca9e6e27 379 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 379 89.223 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 NHAM_RS00015 e77a0ac0f065fe065245eecbca9e6e27 379 SUPERFAMILY SSF52540 5 361 3.3E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00015 e77a0ac0f065fe065245eecbca9e6e27 379 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 6 359 3.7E-50 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 NHAM_RS00015 e77a0ac0f065fe065245eecbca9e6e27 379 Pfam PF02463 RecF/RecN/SMC N terminal domain 6 347 1.1E-14 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal NHAM_RS00015 e77a0ac0f065fe065245eecbca9e6e27 379 Gene3D G3DSA:3.40.50.300 250 361 7.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00015 e77a0ac0f065fe065245eecbca9e6e27 379 Gene3D G3DSA:3.40.50.300 5 181 7.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00015 e77a0ac0f065fe065245eecbca9e6e27 379 ProSitePatterns PS00618 RecF protein signature 2. 319 337 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 NHAM_RS00015 e77a0ac0f065fe065245eecbca9e6e27 379 ProSitePatterns PS00617 RecF protein signature 1. 127 147 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 NHAM_RS00015 e77a0ac0f065fe065245eecbca9e6e27 379 PANTHER PTHR32182 1 377 2.0E-44 T 22-04-2016 NHAM_RS00015 e77a0ac0f065fe065245eecbca9e6e27 379 PANTHER PTHR32182:SF0 1 377 2.0E-44 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 NHAM_RS15670 754f2e14e73782942432cd820667be5f 772 PANTHER PTHR32309:SF13 534 764 1.1E-139 T 22-04-2016 NHAM_RS15670 754f2e14e73782942432cd820667be5f 772 PANTHER PTHR32309:SF13 36 514 1.1E-139 T 22-04-2016 NHAM_RS15670 754f2e14e73782942432cd820667be5f 772 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 555 755 1.9E-33 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 NHAM_RS15670 754f2e14e73782942432cd820667be5f 772 Pfam PF02706 Chain length determinant protein 39 207 5.8E-17 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 NHAM_RS15670 754f2e14e73782942432cd820667be5f 772 PANTHER PTHR32309 534 764 1.1E-139 T 22-04-2016 NHAM_RS15670 754f2e14e73782942432cd820667be5f 772 PANTHER PTHR32309 36 514 1.1E-139 T 22-04-2016 NHAM_RS15670 754f2e14e73782942432cd820667be5f 772 SUPERFAMILY SSF52540 571 753 4.25E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15670 754f2e14e73782942432cd820667be5f 772 Pfam PF13614 AAA domain 583 693 1.1E-10 T 22-04-2016 IPR025669 AAA domain NHAM_RS15670 754f2e14e73782942432cd820667be5f 772 Pfam PF13807 G-rich domain on putative tyrosine kinase 414 485 7.7E-9 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain NHAM_RS15670 754f2e14e73782942432cd820667be5f 772 Gene3D G3DSA:3.40.50.300 570 748 4.1E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02565 cbb13a5dfcddb1dde025a06e5cab1b30 216 PRINTS PR00625 DnaJ domain signature 177 192 8.7E-6 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS02565 cbb13a5dfcddb1dde025a06e5cab1b30 216 PRINTS PR00625 DnaJ domain signature 159 177 8.7E-6 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS02565 cbb13a5dfcddb1dde025a06e5cab1b30 216 PRINTS PR00625 DnaJ domain signature 194 214 8.7E-6 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS02565 cbb13a5dfcddb1dde025a06e5cab1b30 216 Pfam PF00226 DnaJ domain 160 211 1.4E-9 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS02565 cbb13a5dfcddb1dde025a06e5cab1b30 216 Gene3D G3DSA:1.10.287.110 154 210 1.9E-9 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS02565 cbb13a5dfcddb1dde025a06e5cab1b30 216 SUPERFAMILY SSF46565 154 210 6.8E-12 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS02565 cbb13a5dfcddb1dde025a06e5cab1b30 216 SMART SM00271 156 214 5.1E-9 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS14320 9c5ee726e6440647e3b2ed7801f6dac0 366 ProSitePatterns PS01007 Transposases, Mutator family, signature. 234 258 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS14320 9c5ee726e6440647e3b2ed7801f6dac0 366 PANTHER PTHR33217 8 337 4.7E-139 T 22-04-2016 NHAM_RS14320 9c5ee726e6440647e3b2ed7801f6dac0 366 Pfam PF00872 Transposase, Mutator family 13 341 2.7E-110 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS04975 6825eb79f6318c51ca09a8bbdb03d756 762 Pfam PF00593 TonB dependent receptor 526 760 2.1E-23 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS04975 6825eb79f6318c51ca09a8bbdb03d756 762 Gene3D G3DSA:2.170.130.10 109 231 2.0E-25 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS04975 6825eb79f6318c51ca09a8bbdb03d756 762 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 121 762 3.3E-100 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NHAM_RS04975 6825eb79f6318c51ca09a8bbdb03d756 762 PANTHER PTHR32552:SF14 111 762 5.7E-167 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 NHAM_RS04975 6825eb79f6318c51ca09a8bbdb03d756 762 PANTHER PTHR32552:SF14 10 46 5.7E-167 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 NHAM_RS04975 6825eb79f6318c51ca09a8bbdb03d756 762 Pfam PF07715 TonB-dependent Receptor Plug Domain 120 212 2.1E-12 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS04975 6825eb79f6318c51ca09a8bbdb03d756 762 PANTHER PTHR32552 111 762 5.7E-167 T 22-04-2016 NHAM_RS04975 6825eb79f6318c51ca09a8bbdb03d756 762 PANTHER PTHR32552 10 46 5.7E-167 T 22-04-2016 NHAM_RS04975 6825eb79f6318c51ca09a8bbdb03d756 762 SUPERFAMILY SSF56935 113 762 1.03E-97 T 22-04-2016 NHAM_RS04975 6825eb79f6318c51ca09a8bbdb03d756 762 Gene3D G3DSA:2.40.170.20 236 762 1.3E-101 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS03320 1c8c62e239d38de325c378818e91a844 233 PANTHER PTHR26402 3 228 4.7E-94 T 22-04-2016 NHAM_RS03320 1c8c62e239d38de325c378818e91a844 233 SUPERFAMILY SSF52172 2 126 4.27E-43 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS03320 1c8c62e239d38de325c378818e91a844 233 SMART SM00862 150 225 1.1E-31 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS03320 1c8c62e239d38de325c378818e91a844 233 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 3.6E-108 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 NHAM_RS03320 1c8c62e239d38de325c378818e91a844 233 Gene3D G3DSA:1.10.10.10 130 227 6.9E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03320 1c8c62e239d38de325c378818e91a844 233 Gene3D G3DSA:3.40.50.2300 3 125 1.0E-42 T 22-04-2016 NHAM_RS03320 1c8c62e239d38de325c378818e91a844 233 SUPERFAMILY SSF46894 130 226 4.25E-33 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS03320 1c8c62e239d38de325c378818e91a844 233 Pfam PF00072 Response regulator receiver domain 5 117 8.5E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS03320 1c8c62e239d38de325c378818e91a844 233 PANTHER PTHR26402:SF576 3 228 4.7E-94 T 22-04-2016 NHAM_RS03320 1c8c62e239d38de325c378818e91a844 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 2.1E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS03320 1c8c62e239d38de325c378818e91a844 233 SMART SM00448 3 116 1.9E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS13035 6e91fb806dbd7ee2fe57910749dda0f0 228 PANTHER PTHR10920 13 224 1.9E-114 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 NHAM_RS13035 6e91fb806dbd7ee2fe57910749dda0f0 228 PANTHER PTHR10920:SF20 13 224 1.9E-114 T 22-04-2016 NHAM_RS13035 6e91fb806dbd7ee2fe57910749dda0f0 228 Gene3D G3DSA:3.40.50.150 12 224 1.8E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS13035 6e91fb806dbd7ee2fe57910749dda0f0 228 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 24 222 27.881 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 NHAM_RS13035 6e91fb806dbd7ee2fe57910749dda0f0 228 PIRSF PIRSF005461 11 227 3.4E-70 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 NHAM_RS13035 6e91fb806dbd7ee2fe57910749dda0f0 228 SUPERFAMILY SSF53335 18 224 2.07E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS13035 6e91fb806dbd7ee2fe57910749dda0f0 228 Pfam PF01728 FtsJ-like methyltransferase 44 222 5.7E-55 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 NHAM_RS17590 6b0b783dc379fb72544fe8ec3fdd50c3 252 PANTHER PTHR24220 6 228 2.8E-57 T 22-04-2016 NHAM_RS17590 6b0b783dc379fb72544fe8ec3fdd50c3 252 SUPERFAMILY SSF52540 4 226 2.36E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17590 6b0b783dc379fb72544fe8ec3fdd50c3 252 Pfam PF00005 ABC transporter 21 162 9.0E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS17590 6b0b783dc379fb72544fe8ec3fdd50c3 252 Gene3D G3DSA:3.40.50.300 4 231 1.7E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17590 6b0b783dc379fb72544fe8ec3fdd50c3 252 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS17590 6b0b783dc379fb72544fe8ec3fdd50c3 252 SMART SM00382 29 210 2.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS17590 6b0b783dc379fb72544fe8ec3fdd50c3 252 PANTHER PTHR24220:SF581 6 228 2.8E-57 T 22-04-2016 NHAM_RS11885 5f6d1041766b28f8be6dd378e6102086 1243 Pfam PF13116 Protein of unknown function 567 849 3.5E-9 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 NHAM_RS11885 5f6d1041766b28f8be6dd378e6102086 1243 Pfam PF13502 AsmA-like C-terminal region 1083 1206 2.1E-7 T 22-04-2016 IPR032712 AsmA-like, C-terminal NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 PANTHER PTHR32063 2 1031 0.0 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 SUPERFAMILY SSF82866 293 490 2.22E-41 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 Gene3D G3DSA:3.30.70.1430 554 638 7.7E-6 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 PANTHER PTHR32063:SF20 2 1031 0.0 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 Gene3D G3DSA:3.30.2090.10 690 783 3.6E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 Gene3D G3DSA:3.30.70.1430 43 141 1.0E-23 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 SUPERFAMILY SSF82866 779 1001 4.32E-47 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 Gene3D G3DSA:1.10.3850.10 786 1001 1.6E-54 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 SUPERFAMILY SSF82714 691 780 2.09E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 SUPERFAMILY SSF82693 547 641 4.88E-9 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 Pfam PF00873 AcrB/AcrD/AcrF family 7 1000 7.3E-231 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 Gene3D G3DSA:1.20.1640.10 301 496 5.3E-50 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 SUPERFAMILY SSF82714 185 266 5.75E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 SUPERFAMILY SSF82693 43 134 1.41E-21 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 Gene3D G3DSA:3.30.70.1320 142 180 3.1E-12 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 Gene3D G3DSA:3.30.70.1320 271 300 3.1E-12 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 Gene3D G3DSA:3.30.2090.10 184 266 8.8E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.5E-48 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.5E-48 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.5E-48 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.5E-48 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.5E-48 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.5E-48 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.5E-48 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 PRINTS PR00702 Acriflavin resistance protein family signature 534 551 1.5E-48 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 SUPERFAMILY SSF82693 138 183 1.4E-16 T 22-04-2016 NHAM_RS18510 80851b71494dd84d7755c12a81a4def3 1040 SUPERFAMILY SSF82693 269 314 1.4E-16 T 22-04-2016 NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 PANTHER PTHR22777 33 155 4.5E-97 T 22-04-2016 NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 Gene3D G3DSA:3.10.580.10 74 242 9.9E-17 T 22-04-2016 NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 SMART SM01091 251 334 1.3E-21 T 22-04-2016 IPR005170 Transporter-associated domain NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 Pfam PF00571 CBS domain 185 234 2.0E-7 T 22-04-2016 IPR000644 CBS domain NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 Pfam PF00571 CBS domain 90 147 7.8E-8 T 22-04-2016 IPR000644 CBS domain NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 PANTHER PTHR22777 181 374 4.5E-97 T 22-04-2016 NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 PANTHER PTHR22777:SF17 33 155 4.5E-97 T 22-04-2016 NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 Pfam PF03471 Transporter associated domain 252 332 1.1E-16 T 22-04-2016 IPR005170 Transporter-associated domain NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 SUPERFAMILY SSF54631 77 238 1.52E-31 T 22-04-2016 NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 SMART SM00116 98 147 1.2 T 22-04-2016 IPR000644 CBS domain NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 SMART SM00116 187 235 0.34 T 22-04-2016 IPR000644 CBS domain NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 Gene3D G3DSA:3.30.465.10 243 330 5.6E-21 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 PANTHER PTHR22777:SF17 181 374 4.5E-97 T 22-04-2016 NHAM_RS00115 1125276d0c64348549ea4ac4dd76f40e 374 SUPERFAMILY SSF56176 249 335 1.94E-16 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NHAM_RS00510 0fcf9b583e8272b92b7f623ef5838c01 294 Pfam PF02195 ParB-like nuclease domain 35 125 2.1E-25 T 22-04-2016 IPR003115 ParB/Sulfiredoxin NHAM_RS00510 0fcf9b583e8272b92b7f623ef5838c01 294 PANTHER PTHR33375 34 289 3.9E-83 T 22-04-2016 NHAM_RS00510 0fcf9b583e8272b92b7f623ef5838c01 294 SMART SM00470 34 126 7.9E-33 T 22-04-2016 IPR003115 ParB/Sulfiredoxin NHAM_RS00510 0fcf9b583e8272b92b7f623ef5838c01 294 Pfam PF08535 KorB domain 150 185 8.2E-5 T 22-04-2016 IPR013741 Transcriptional repressor protein KorB NHAM_RS00510 0fcf9b583e8272b92b7f623ef5838c01 294 Gene3D G3DSA:3.90.1530.10 31 132 1.7E-37 T 22-04-2016 NHAM_RS00510 0fcf9b583e8272b92b7f623ef5838c01 294 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 32 201 1.7E-58 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 NHAM_RS00510 0fcf9b583e8272b92b7f623ef5838c01 294 SUPERFAMILY SSF110849 34 172 2.56E-34 T 22-04-2016 IPR003115 ParB/Sulfiredoxin NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 SMART SM00267 514 687 4.2E-38 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 405 520 6.4E-11 T 22-04-2016 IPR000014 PAS domain NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 PANTHER PTHR10799 559 797 7.9E-87 T 22-04-2016 NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 Gene3D G3DSA:3.20.20.450 701 951 9.7E-92 T 22-04-2016 IPR001633 EAL domain NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 Pfam PF00563 EAL domain 703 939 6.7E-67 T 22-04-2016 IPR001633 EAL domain NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 SMART SM00086 472 514 2.4E-7 T 22-04-2016 IPR001610 PAC motif NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 Gene3D G3DSA:3.30.450.20 400 512 8.0E-23 T 22-04-2016 NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 Pfam PF07695 7TM diverse intracellular signalling 181 357 6.6E-7 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 524 686 2.4E-30 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 SUPERFAMILY SSF141868 703 951 2.75E-80 T 22-04-2016 IPR001633 EAL domain NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 SUPERFAMILY SSF55073 530 688 6.98E-37 T 22-04-2016 IPR029787 Nucleotide cyclase NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 PANTHER PTHR10799:SF710 559 797 7.9E-87 T 22-04-2016 NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 Pfam PF00990 Diguanylate cyclase, GGDEF domain 526 682 2.0E-35 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 Pfam PF07696 7TMR-DISM extracellular 2 79 169 3.8E-6 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 SMART SM00091 397 465 8.4E-4 T 22-04-2016 IPR000014 PAS domain NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 SMART SM00052 697 944 9.0E-104 T 22-04-2016 IPR001633 EAL domain NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 Gene3D G3DSA:3.30.70.270 527 693 1.5E-44 T 22-04-2016 NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 Pfam PF08447 PAS fold 420 507 1.3E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS18210 cbbdb2c4927d359fc91895f41955d671 958 SUPERFAMILY SSF55785 406 517 1.8E-19 T 22-04-2016 IPR000014 PAS domain NHAM_RS08075 daa83823a59d17b806e355a79227ecf8 89 SUPERFAMILY SSF160544 8 84 1.1E-24 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal NHAM_RS08075 daa83823a59d17b806e355a79227ecf8 89 Gene3D G3DSA:3.40.1690.10 8 84 3.6E-27 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal NHAM_RS08075 daa83823a59d17b806e355a79227ecf8 89 PANTHER PTHR30531 1 89 1.9E-33 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NHAM_RS08075 daa83823a59d17b806e355a79227ecf8 89 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 81 4.0E-24 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NHAM_RS13445 84342692616c110072f118a120e3c62f 127 Gene3D G3DSA:1.10.1750.10 26 111 2.9E-23 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 NHAM_RS13445 84342692616c110072f118a120e3c62f 127 SMART SM00760 23 92 3.9E-16 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 NHAM_RS13445 84342692616c110072f118a120e3c62f 127 SUPERFAMILY SSF48295 26 110 1.99E-19 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS13445 84342692616c110072f118a120e3c62f 127 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 27 91 3.3E-16 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 NHAM_RS17375 59fb1691daefe053fbb958742c25bee3 515 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 377 513 3.9E-29 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NHAM_RS17375 59fb1691daefe053fbb958742c25bee3 515 Gene3D G3DSA:3.40.50.970 334 515 3.7E-47 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS17375 59fb1691daefe053fbb958742c25bee3 515 PANTHER PTHR18968 1 513 2.9E-292 T 22-04-2016 NHAM_RS17375 59fb1691daefe053fbb958742c25bee3 515 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 168 1.1E-33 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 NHAM_RS17375 59fb1691daefe053fbb958742c25bee3 515 SUPERFAMILY SSF52518 1 173 1.42E-37 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS17375 59fb1691daefe053fbb958742c25bee3 515 PANTHER PTHR18968:SF86 1 513 2.9E-292 T 22-04-2016 NHAM_RS17375 59fb1691daefe053fbb958742c25bee3 515 Gene3D G3DSA:3.40.50.970 1 172 8.5E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS17375 59fb1691daefe053fbb958742c25bee3 515 SUPERFAMILY SSF52518 336 515 1.97E-45 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS18205 8fc8a7ad3074c572f0a7be7756564c50 332 PANTHER PTHR11695:SF610 22 332 1.4E-135 T 22-04-2016 NHAM_RS18205 8fc8a7ad3074c572f0a7be7756564c50 332 Gene3D G3DSA:3.90.180.10 6 152 9.6E-46 T 22-04-2016 IPR011032 GroES-like NHAM_RS18205 8fc8a7ad3074c572f0a7be7756564c50 332 SUPERFAMILY SSF51735 118 293 9.35E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS18205 8fc8a7ad3074c572f0a7be7756564c50 332 SMART SM00829 17 330 1.9E-54 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NHAM_RS18205 8fc8a7ad3074c572f0a7be7756564c50 332 SUPERFAMILY SSF50129 8 147 3.8E-36 T 22-04-2016 IPR011032 GroES-like NHAM_RS18205 8fc8a7ad3074c572f0a7be7756564c50 332 Gene3D G3DSA:3.40.50.720 153 269 5.9E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS18205 8fc8a7ad3074c572f0a7be7756564c50 332 Pfam PF00107 Zinc-binding dehydrogenase 158 273 5.5E-33 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NHAM_RS18205 8fc8a7ad3074c572f0a7be7756564c50 332 PANTHER PTHR11695 22 332 1.4E-135 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NHAM_RS18205 8fc8a7ad3074c572f0a7be7756564c50 332 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 8 332 2.6E-142 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- NHAM_RS18205 8fc8a7ad3074c572f0a7be7756564c50 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 133 1.5E-9 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 124 329 2.8E-74 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 SUPERFAMILY SSF51246 338 455 1.26E-39 T 22-04-2016 IPR011054 Rudiment single hybrid motif NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 PANTHER PTHR18866:SF102 1 664 0.0 T 22-04-2016 NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 Gene3D G3DSA:2.40.50.100 594 663 2.3E-17 T 22-04-2016 NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 PANTHER PTHR18866 1 664 0.0 T 22-04-2016 NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 SUPERFAMILY SSF52440 5 121 5.4E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 Gene3D G3DSA:3.30.1490.20 137 210 4.0E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 SMART SM00878 343 450 6.0E-57 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 Pfam PF00289 Biotin carboxylase, N-terminal domain 10 118 1.0E-43 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 293 300 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 SUPERFAMILY SSF51230 589 663 9.55E-16 T 22-04-2016 IPR011053 Single hybrid motif NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 Gene3D G3DSA:3.30.470.20 211 454 1.4E-99 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 Pfam PF02785 Biotin carboxylase C-terminal domain 343 451 7.1E-39 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 Pfam PF00364 Biotin-requiring enzyme 599 662 6.3E-11 T 22-04-2016 IPR000089 Biotin/lipoyl attachment NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 161 175 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 SUPERFAMILY SSF56059 91 355 5.66E-70 T 22-04-2016 NHAM_RS10800 9935a1247de6c01d57c659e409a11710 666 Gene3D G3DSA:3.40.50.20 10 136 4.6E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS01765 38f9f0f9d85e2f8720c01ea3fda323c2 407 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 44 382 5.9E-51 T 22-04-2016 IPR006427 Phage portal protein, HK97 NHAM_RS01765 38f9f0f9d85e2f8720c01ea3fda323c2 407 Pfam PF04860 Phage portal protein 52 376 8.8E-72 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein NHAM_RS09775 15bccd6cf62dcc12897924cf7c16b75c 327 SUPERFAMILY SSF51735 139 294 2.15E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS09775 15bccd6cf62dcc12897924cf7c16b75c 327 Gene3D G3DSA:3.40.50.720 166 295 1.9E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS09775 15bccd6cf62dcc12897924cf7c16b75c 327 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 NHAM_RS09775 15bccd6cf62dcc12897924cf7c16b75c 327 SUPERFAMILY SSF50129 1 181 3.96E-48 T 22-04-2016 IPR011032 GroES-like NHAM_RS09775 15bccd6cf62dcc12897924cf7c16b75c 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 131 6.1E-29 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NHAM_RS09775 15bccd6cf62dcc12897924cf7c16b75c 327 Gene3D G3DSA:3.90.180.10 1 165 2.9E-54 T 22-04-2016 IPR011032 GroES-like NHAM_RS09775 15bccd6cf62dcc12897924cf7c16b75c 327 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 11 325 4.4E-103 T 22-04-2016 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 NHAM_RS09775 15bccd6cf62dcc12897924cf7c16b75c 327 PANTHER PTHR11695 13 327 1.4E-165 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NHAM_RS09775 15bccd6cf62dcc12897924cf7c16b75c 327 PANTHER PTHR11695:SF403 13 327 1.4E-165 T 22-04-2016 NHAM_RS04575 1352866b9eef311f7bfe7f904b75e3c8 541 Pfam PF11737 Protein of unknown function (DUF3300) 51 275 1.1E-79 T 22-04-2016 IPR021728 Protein of unknown function DUF3300 NHAM_RS04575 1352866b9eef311f7bfe7f904b75e3c8 541 PANTHER PTHR40269 1 451 1.6E-143 T 22-04-2016 NHAM_RS04575 1352866b9eef311f7bfe7f904b75e3c8 541 PANTHER PTHR40269:SF1 1 451 1.6E-143 T 22-04-2016 NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 Gene3D G3DSA:3.40.50.970 637 832 2.7E-22 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 PIRSF PIRSF000157 1 989 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 Pfam PF02779 Transketolase, pyrimidine binding domain 635 830 1.3E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 PANTHER PTHR23152:SF4 1 989 0.0 T 22-04-2016 NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 Gene3D G3DSA:3.40.50.970 196 581 2.5E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 SMART SM00861 636 829 5.7E-61 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 PANTHER PTHR23152 1 989 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 SUPERFAMILY SSF52518 619 836 3.68E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 13 52 1.7E-17 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 SUPERFAMILY SSF52518 157 579 2.5E-93 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 834 988 1.8E-50 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 Pfam PF00676 Dehydrogenase E1 component 246 560 3.4E-59 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 NHAM_RS02815 3016cae5968ed12c11642ede02c45400 989 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 102 987 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 SMART SM00091 11 78 0.013 T 22-04-2016 IPR000014 PAS domain NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 SMART SM00091 138 204 6.6E-15 T 22-04-2016 IPR000014 PAS domain NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 SMART SM00387 389 498 4.2E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 457 1.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 1.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 495 1.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 476 1.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 SUPERFAMILY SSF47384 273 342 1.55E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 Gene3D G3DSA:3.30.565.10 350 497 8.9E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 Gene3D G3DSA:3.30.450.20 11 123 2.0E-20 T 22-04-2016 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 496 4.4E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 SUPERFAMILY SSF55785 18 127 7.85E-17 T 22-04-2016 IPR000014 PAS domain NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 SMART SM00388 276 347 2.4E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 Pfam PF00989 PAS fold 139 250 1.0E-21 T 22-04-2016 IPR013767 PAS fold GO:0006355 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 261 7.2E-37 T 22-04-2016 IPR000014 PAS domain NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 Gene3D G3DSA:1.10.287.130 275 341 2.5E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 Pfam PF00512 His Kinase A (phospho-acceptor) domain 277 344 1.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 Gene3D G3DSA:3.30.450.20 124 252 3.0E-28 T 22-04-2016 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 PANTHER PTHR24423 4 501 4.3E-187 T 22-04-2016 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 SUPERFAMILY SSF55874 334 500 2.75E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 SUPERFAMILY SSF55785 149 263 7.99E-29 T 22-04-2016 IPR000014 PAS domain NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 PANTHER PTHR24423:SF505 4 501 4.3E-187 T 22-04-2016 NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 SMART SM00086 214 254 24.0 T 22-04-2016 IPR001610 PAC motif NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 SMART SM00086 84 126 0.062 T 22-04-2016 IPR001610 PAC motif NHAM_RS09735 3e61304f7c22f0b347334cd93464436c 506 Pfam PF08447 PAS fold 34 120 2.0E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 3.4E-161 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 417 3.8E-28 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 PANTHER PTHR10520 1 423 4.9E-255 T 22-04-2016 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 41.992 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 286 293 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 SUPERFAMILY SSF51246 326 420 1.2E-30 T 22-04-2016 IPR011054 Rudiment single hybrid motif NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.5E-34 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 Gene3D G3DSA:3.30.1490.20 119 187 6.1E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 Gene3D G3DSA:3.90.600.10 327 419 9.6E-36 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 292 4.9E-77 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 Gene3D G3DSA:3.40.50.20 2 93 1.7E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 SUPERFAMILY SSF56059 102 314 5.3E-56 T 22-04-2016 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 Gene3D G3DSA:3.30.470.20 189 322 3.7E-58 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 SUPERFAMILY SSF52440 1 101 9.06E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 SMART SM01209 101 292 1.0E-131 T 22-04-2016 NHAM_RS16270 9a5b9f378fc51a66f7b326256b0e4649 428 SMART SM01210 326 420 2.4E-53 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS15850 13e8c8c9f142220ed336511024c8fc2d 574 SMART SM00028 472 505 56.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS15850 13e8c8c9f142220ed336511024c8fc2d 574 SMART SM00028 506 539 0.046 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS15850 13e8c8c9f142220ed336511024c8fc2d 574 SMART SM00028 435 468 9.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS15850 13e8c8c9f142220ed336511024c8fc2d 574 SMART SM00862 22 95 8.6E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS15850 13e8c8c9f142220ed336511024c8fc2d 574 Pfam PF07719 Tetratricopeptide repeat 509 538 4.2E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 NHAM_RS15850 13e8c8c9f142220ed336511024c8fc2d 574 Pfam PF00486 Transcriptional regulatory protein, C terminal 22 95 2.1E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS15850 13e8c8c9f142220ed336511024c8fc2d 574 PANTHER PTHR23083 329 539 1.4E-23 T 22-04-2016 NHAM_RS15850 13e8c8c9f142220ed336511024c8fc2d 574 Pfam PF13181 Tetratricopeptide repeat 437 463 0.028 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS15850 13e8c8c9f142220ed336511024c8fc2d 574 SUPERFAMILY SSF46894 3 98 6.24E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS15850 13e8c8c9f142220ed336511024c8fc2d 574 Gene3D G3DSA:1.25.40.10 335 553 3.5E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS15850 13e8c8c9f142220ed336511024c8fc2d 574 Gene3D G3DSA:1.10.10.10 2 99 3.0E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS15850 13e8c8c9f142220ed336511024c8fc2d 574 SUPERFAMILY SSF48452 336 538 2.47E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS10980 ecbd25ad28fc23d4e3fed0eb4fdf5da7 363 PANTHER PTHR30349:SF20 52 116 4.9E-41 T 22-04-2016 NHAM_RS10980 ecbd25ad28fc23d4e3fed0eb4fdf5da7 363 Gene3D G3DSA:1.10.150.130 59 171 1.4E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS10980 ecbd25ad28fc23d4e3fed0eb4fdf5da7 363 PANTHER PTHR30349:SF20 140 356 4.9E-41 T 22-04-2016 NHAM_RS10980 ecbd25ad28fc23d4e3fed0eb4fdf5da7 363 PANTHER PTHR30349 52 116 4.9E-41 T 22-04-2016 NHAM_RS10980 ecbd25ad28fc23d4e3fed0eb4fdf5da7 363 Gene3D G3DSA:1.10.443.10 187 351 5.8E-39 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS10980 ecbd25ad28fc23d4e3fed0eb4fdf5da7 363 SUPERFAMILY SSF56349 59 354 9.76E-56 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS10980 ecbd25ad28fc23d4e3fed0eb4fdf5da7 363 Pfam PF00589 Phage integrase family 188 347 8.3E-29 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS10980 ecbd25ad28fc23d4e3fed0eb4fdf5da7 363 PANTHER PTHR30349 140 356 4.9E-41 T 22-04-2016 NHAM_RS11760 1572b13ce65e1fef2e43d18ca3b4030a 331 PIRSF PIRSF004532 13 331 7.5E-137 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 NHAM_RS11760 1572b13ce65e1fef2e43d18ca3b4030a 331 PANTHER PTHR30447 6 330 4.7E-159 T 22-04-2016 NHAM_RS11760 1572b13ce65e1fef2e43d18ca3b4030a 331 Gene3D G3DSA:3.30.540.10 14 180 1.3E-59 T 22-04-2016 NHAM_RS11760 1572b13ce65e1fef2e43d18ca3b4030a 331 Gene3D G3DSA:3.30.540.10 181 323 7.3E-40 T 22-04-2016 NHAM_RS11760 1572b13ce65e1fef2e43d18ca3b4030a 331 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 17 322 7.8E-132 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 NHAM_RS11760 1572b13ce65e1fef2e43d18ca3b4030a 331 SUPERFAMILY SSF56655 14 323 1.4E-102 T 22-04-2016 NHAM_RS11760 1572b13ce65e1fef2e43d18ca3b4030a 331 PANTHER PTHR30447:SF0 6 330 4.7E-159 T 22-04-2016 NHAM_RS11760 1572b13ce65e1fef2e43d18ca3b4030a 331 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 14 323 1.7E-101 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 540 1.4E-29 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 625 637 1.4E-29 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 405 419 1.4E-29 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 254 268 1.4E-29 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 602 621 1.4E-29 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 561 1.4E-29 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 SUPERFAMILY SSF55008 7 71 1.57E-15 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PANTHER PTHR24093:SF317 9 710 1.3E-205 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PANTHER PTHR24093 9 710 1.3E-205 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 172 704 2.7E-123 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 SUPERFAMILY SSF56784 403 423 2.03E-51 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS19115 32e09e9816427c331c35229a81792121 711 SUPERFAMILY SSF56784 501 702 2.03E-51 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS19115 32e09e9816427c331c35229a81792121 711 Pfam PF00702 haloacid dehalogenase-like hydrolase 401 614 2.2E-40 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 SUPERFAMILY SSF81653 207 304 3.53E-26 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 407 413 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site NHAM_RS19115 32e09e9816427c331c35229a81792121 711 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 177 681 2.8E-82 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 Gene3D G3DSA:3.30.70.100 7 69 2.2E-16 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PRINTS PR00941 Cadmium-transporting ATPase signature 20 41 2.7E-13 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PRINTS PR00941 Cadmium-transporting ATPase signature 189 209 2.7E-13 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PRINTS PR00941 Cadmium-transporting ATPase signature 9 18 2.7E-13 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PRINTS PR00941 Cadmium-transporting ATPase signature 270 286 2.7E-13 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 PRINTS PR00941 Cadmium-transporting ATPase signature 289 303 2.7E-13 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 Gene3D G3DSA:3.40.50.1000 532 668 1.6E-40 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS19115 32e09e9816427c331c35229a81792121 711 Gene3D G3DSA:3.40.50.1000 378 419 1.6E-40 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS19115 32e09e9816427c331c35229a81792121 711 Gene3D G3DSA:3.40.1110.10 420 531 2.6E-19 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 154 465 4.5E-100 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 Pfam PF00403 Heavy-metal-associated domain 9 68 4.2E-10 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 Gene3D G3DSA:2.70.150.10 157 305 9.1E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 154 704 1.6E-182 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 Pfam PF00122 E1-E2 ATPase 175 396 5.7E-66 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 SUPERFAMILY SSF81665 651 690 3.27E-19 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 SUPERFAMILY SSF81665 305 399 3.27E-19 T 22-04-2016 NHAM_RS19115 32e09e9816427c331c35229a81792121 711 SUPERFAMILY SSF81665 157 208 3.27E-19 T 22-04-2016 NHAM_RS16190 e1726c8b0a852605db384cc01ad28b51 445 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS16190 e1726c8b0a852605db384cc01ad28b51 445 PANTHER PTHR11986 17 444 1.3E-239 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS16190 e1726c8b0a852605db384cc01ad28b51 445 Gene3D G3DSA:3.40.640.10 68 344 1.5E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS16190 e1726c8b0a852605db384cc01ad28b51 445 Pfam PF00202 Aminotransferase class-III 32 441 6.2E-102 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS16190 e1726c8b0a852605db384cc01ad28b51 445 SUPERFAMILY SSF53383 13 441 2.04E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS16190 e1726c8b0a852605db384cc01ad28b51 445 PANTHER PTHR11986:SF80 17 444 1.3E-239 T 22-04-2016 NHAM_RS16190 e1726c8b0a852605db384cc01ad28b51 445 Gene3D G3DSA:3.90.1150.10 13 66 5.9E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS16190 e1726c8b0a852605db384cc01ad28b51 445 Gene3D G3DSA:3.90.1150.10 346 444 5.9E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS16280 e02b2b4049d09f0df9d60715da16f4fe 272 PANTHER PTHR17630 31 239 9.0E-31 T 22-04-2016 NHAM_RS16280 e02b2b4049d09f0df9d60715da16f4fe 272 SUPERFAMILY SSF53474 28 270 4.74E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS16280 e02b2b4049d09f0df9d60715da16f4fe 272 Gene3D G3DSA:3.40.50.1820 27 272 7.8E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS16280 e02b2b4049d09f0df9d60715da16f4fe 272 PANTHER PTHR17630:SF32 31 239 9.0E-31 T 22-04-2016 NHAM_RS16280 e02b2b4049d09f0df9d60715da16f4fe 272 Pfam PF01738 Dienelactone hydrolase family 42 241 1.1E-12 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 NHAM_RS00310 f48877ae930599e39e0ad4b7e95a7128 414 PIRSF PIRSF001413 9 414 5.4E-157 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS00310 f48877ae930599e39e0ad4b7e95a7128 414 Gene3D G3DSA:3.40.50.1100 118 196 4.3E-22 T 22-04-2016 NHAM_RS00310 f48877ae930599e39e0ad4b7e95a7128 414 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 16 406 8.9E-185 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS00310 f48877ae930599e39e0ad4b7e95a7128 414 PANTHER PTHR10314 16 405 2.3E-232 T 22-04-2016 NHAM_RS00310 f48877ae930599e39e0ad4b7e95a7128 414 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 11 409 52.964 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS00310 f48877ae930599e39e0ad4b7e95a7128 414 Gene3D G3DSA:3.40.50.1100 197 411 1.7E-94 T 22-04-2016 NHAM_RS00310 f48877ae930599e39e0ad4b7e95a7128 414 SUPERFAMILY SSF53686 12 406 7.99E-144 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS00310 f48877ae930599e39e0ad4b7e95a7128 414 PANTHER PTHR10314:SF3 16 405 2.3E-232 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS00310 f48877ae930599e39e0ad4b7e95a7128 414 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 100 114 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS00310 f48877ae930599e39e0ad4b7e95a7128 414 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 79 396 7.7E-45 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 SUPERFAMILY SSF55874 298 481 5.24E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 236 295 3.2E-13 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 SUPERFAMILY SSF50341 645 766 2.88E-12 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 SUPERFAMILY SSF50341 482 617 5.36E-28 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Gene3D G3DSA:3.30.565.10 300 482 8.4E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 PANTHER PTHR22617:SF6 1 634 5.9E-224 T 22-04-2016 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 SUPERFAMILY SSF52172 787 903 2.13E-30 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Gene3D G3DSA:3.40.50.2300 786 903 2.0E-31 T 22-04-2016 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 SMART SM00448 787 900 2.9E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 PANTHER PTHR22617 1 634 5.9E-224 T 22-04-2016 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Gene3D G3DSA:1.10.287.560 236 296 6.7E-19 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Gene3D G3DSA:2.30.30.40 574 617 8.8E-19 T 22-04-2016 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Gene3D G3DSA:2.30.30.40 483 504 8.8E-19 T 22-04-2016 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Pfam PF01584 CheW-like domain 488 619 6.0E-22 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Pfam PF00072 Response regulator receiver domain 789 900 9.4E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Gene3D G3DSA:2.40.50.180 515 573 4.4E-17 T 22-04-2016 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Gene3D G3DSA:2.40.50.180 668 725 6.6E-7 T 22-04-2016 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 SMART SM00260 475 618 1.7E-36 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 SMART SM01231 235 295 3.7E-17 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Pfam PF01627 Hpt domain 3 97 2.0E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Gene3D G3DSA:1.20.120.160 1 138 9.3E-35 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 SUPERFAMILY SSF47384 236 296 1.61E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 SMART SM00073 1 97 3.2E-23 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 SMART SM00387 340 483 2.1E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 482 3.3E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17330 e998d38796d2d3a6d04df30e110e3d16 911 SUPERFAMILY SSF47226 1 122 5.1E-27 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NHAM_RS18865 ee08766969433f654e0cfc41027eeaf7 165 PANTHER PTHR10374 1 156 7.4E-50 T 22-04-2016 NHAM_RS18865 ee08766969433f654e0cfc41027eeaf7 165 SUPERFAMILY SSF54593 10 163 1.32E-49 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS18865 ee08766969433f654e0cfc41027eeaf7 165 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 130 5.9E-15 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NHAM_RS18865 ee08766969433f654e0cfc41027eeaf7 165 PANTHER PTHR10374:SF14 1 156 7.4E-50 T 22-04-2016 NHAM_RS18865 ee08766969433f654e0cfc41027eeaf7 165 ProSitePatterns PS00934 Glyoxalase I signature 1. 16 37 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 NHAM_RS18865 ee08766969433f654e0cfc41027eeaf7 165 Gene3D G3DSA:3.10.180.10 5 141 3.0E-37 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 SUPERFAMILY SSF55681 13 309 6.96E-125 T 22-04-2016 NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 Gene3D G3DSA:3.30.930.10 7 219 5.2E-99 T 22-04-2016 NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 14 309 6.8E-143 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 PANTHER PTHR30075 1 244 1.5E-219 T 22-04-2016 NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 PANTHER PTHR30075 260 313 1.5E-219 T 22-04-2016 NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 13 308 4.6E-134 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 12 312 57.276 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 Gene3D G3DSA:1.20.58.180 221 311 7.8E-33 T 22-04-2016 NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 167 182 1.0E-53 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 66 81 1.0E-53 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 87 107 1.0E-53 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 144 164 1.0E-53 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16450 8fcb672bba29c6fbd77930492761857a 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 118 142 1.0E-53 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS13040 8552483541eca318e748afb178b7c10f 354 Gene3D G3DSA:3.30.420.150 161 348 1.5E-53 T 22-04-2016 NHAM_RS13040 8552483541eca318e748afb178b7c10f 354 PANTHER PTHR30005 14 351 1.9E-75 T 22-04-2016 NHAM_RS13040 8552483541eca318e748afb178b7c10f 354 SUPERFAMILY SSF53067 165 348 1.68E-38 T 22-04-2016 NHAM_RS13040 8552483541eca318e748afb178b7c10f 354 Gene3D G3DSA:3.30.420.40 38 156 1.2E-42 T 22-04-2016 NHAM_RS13040 8552483541eca318e748afb178b7c10f 354 SUPERFAMILY SSF53067 39 159 2.36E-34 T 22-04-2016 NHAM_RS13040 8552483541eca318e748afb178b7c10f 354 Pfam PF02541 Ppx/GppA phosphatase family 54 346 1.5E-46 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 Gene3D G3DSA:3.40.50.2300 3 128 5.7E-44 T 22-04-2016 NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 Gene3D G3DSA:3.40.50.2300 154 282 6.4E-26 T 22-04-2016 NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 SUPERFAMILY SSF52172 3 132 3.98E-42 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 PANTHER PTHR26402 3 134 7.8E-41 T 22-04-2016 NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 PANTHER PTHR26402 386 398 7.8E-41 T 22-04-2016 NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 SMART SM00448 3 116 7.7E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 SMART SM00448 156 268 6.1E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 SUPERFAMILY SSF52172 153 287 2.85E-26 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 SMART SM00267 282 455 2.0E-63 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 Pfam PF00072 Response regulator receiver domain 158 267 3.1E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 Pfam PF00072 Response regulator receiver domain 5 116 3.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 Gene3D G3DSA:3.30.70.270 294 454 2.3E-55 T 22-04-2016 NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 291 455 2.1E-56 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 292 451 4.3E-51 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS12465 8b1afee578002ef41cc0f2b235a30a4d 457 SUPERFAMILY SSF55073 297 453 7.61E-49 T 22-04-2016 IPR029787 Nucleotide cyclase NHAM_RS05890 ab4b6ea5f85756fef0fa5a461d5b8c57 269 PANTHER PTHR41523:SF1 23 259 4.0E-123 T 22-04-2016 NHAM_RS05890 ab4b6ea5f85756fef0fa5a461d5b8c57 269 PANTHER PTHR41523 23 259 4.0E-123 T 22-04-2016 NHAM_RS05890 ab4b6ea5f85756fef0fa5a461d5b8c57 269 SMART SM00911 70 152 1.1E-33 T 22-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 NHAM_RS05890 ab4b6ea5f85756fef0fa5a461d5b8c57 269 Pfam PF07536 HWE histidine kinase 70 152 2.3E-24 T 22-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 NHAM_RS15430 96510a23908fbbbc58239e6c4d786afb 386 SUPERFAMILY SSF53795 198 273 3.97E-12 T 22-04-2016 NHAM_RS15430 96510a23908fbbbc58239e6c4d786afb 386 Gene3D G3DSA:3.40.50.300 198 260 4.2E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15430 96510a23908fbbbc58239e6c4d786afb 386 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 33 96 1.6E-6 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 NHAM_RS06245 42fdd6c0232bc210981be9926607c799 526 SUPERFAMILY SSF55166 68 197 2.88E-33 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NHAM_RS06245 42fdd6c0232bc210981be9926607c799 526 Gene3D G3DSA:3.30.1380.10 68 195 1.6E-28 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NHAM_RS06245 42fdd6c0232bc210981be9926607c799 526 PANTHER PTHR37425 16 524 2.4E-68 T 22-04-2016 NHAM_RS06245 42fdd6c0232bc210981be9926607c799 526 Pfam PF05951 Bacterial protein of unknown function (DUF882) 41 193 3.4E-64 T 22-04-2016 IPR010275 Protein of unknown function DUF882 NHAM_RS01135 76646a15c4296261d197636dc60671ec 335 SUPERFAMILY SSF118352 281 331 1.02E-12 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 NHAM_RS01135 76646a15c4296261d197636dc60671ec 335 SUPERFAMILY SSF64397 25 288 9.68E-62 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 NHAM_RS01135 76646a15c4296261d197636dc60671ec 335 PIRSF PIRSF005261 14 335 5.0E-69 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 NHAM_RS01135 76646a15c4296261d197636dc60671ec 335 Gene3D G3DSA:3.55.30.10 25 281 7.0E-73 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 NHAM_RS01135 76646a15c4296261d197636dc60671ec 335 PANTHER PTHR30111 1 209 6.0E-59 T 22-04-2016 NHAM_RS01135 76646a15c4296261d197636dc60671ec 335 PANTHER PTHR30111 231 331 6.0E-59 T 22-04-2016 NHAM_RS01135 76646a15c4296261d197636dc60671ec 335 Pfam PF01430 Hsp33 protein 26 328 1.8E-73 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 NHAM_RS01135 76646a15c4296261d197636dc60671ec 335 Gene3D G3DSA:3.90.1280.10 282 331 4.3E-16 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 NHAM_RS01135 76646a15c4296261d197636dc60671ec 335 PANTHER PTHR30111:SF1 1 209 6.0E-59 T 22-04-2016 NHAM_RS01135 76646a15c4296261d197636dc60671ec 335 PANTHER PTHR30111:SF1 231 331 6.0E-59 T 22-04-2016 NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 SUPERFAMILY SSF100934 502 601 6.67E-21 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 SUPERFAMILY SSF53067 186 377 1.73E-69 T 22-04-2016 NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 SUPERFAMILY SSF100920 379 535 1.7E-62 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 PRINTS PR00301 70kDa heat shock protein signature 138 158 2.2E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 PRINTS PR00301 70kDa heat shock protein signature 383 402 2.2E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.2E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.2E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.2E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.2E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.2E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 PRINTS PR00301 70kDa heat shock protein signature 197 207 2.2E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 PRINTS PR00301 70kDa heat shock protein signature 464 480 2.2E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 PANTHER PTHR19375 2 630 0.0 T 22-04-2016 NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 599 1.6E-302 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 PANTHER PTHR19375:SF173 2 630 0.0 T 22-04-2016 NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 Gene3D G3DSA:3.30.420.40 119 191 3.5E-66 T 22-04-2016 NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 Gene3D G3DSA:3.30.420.40 4 52 3.5E-66 T 22-04-2016 NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 623 37.997 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 Gene3D G3DSA:1.20.1270.10 528 598 7.4E-32 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 Pfam PF00012 Hsp70 protein 4 599 8.7E-277 T 22-04-2016 IPR013126 Heat shock protein 70 family NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 SUPERFAMILY SSF53067 4 183 1.85E-67 T 22-04-2016 NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 Gene3D G3DSA:3.30.420.40 314 356 1.2E-36 T 22-04-2016 NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 Gene3D G3DSA:3.30.420.40 192 224 1.2E-36 T 22-04-2016 NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 Gene3D G3DSA:3.30.30.30 53 108 4.3E-29 T 22-04-2016 NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 Gene3D G3DSA:2.60.34.10 385 527 7.8E-72 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain NHAM_RS00775 2444c100d9a276796ef7e254b3024943 632 Gene3D G3DSA:3.90.640.10 225 309 5.5E-32 T 22-04-2016 NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 494 9.5E-40 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 SUPERFAMILY SSF55073 342 499 1.41E-48 T 22-04-2016 IPR029787 Nucleotide cyclase NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 Pfam PF00990 Diguanylate cyclase, GGDEF domain 337 492 4.0E-46 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 Gene3D G3DSA:3.20.20.450 511 755 3.8E-89 T 22-04-2016 IPR001633 EAL domain NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 SUPERFAMILY SSF141868 514 755 1.02E-79 T 22-04-2016 IPR001633 EAL domain NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 PANTHER PTHR10799 370 607 1.2E-91 T 22-04-2016 NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 PANTHER PTHR10799 189 342 1.2E-91 T 22-04-2016 NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 PANTHER PTHR10799:SF657 370 607 1.2E-91 T 22-04-2016 NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 PANTHER PTHR10799:SF657 189 342 1.2E-91 T 22-04-2016 NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 Pfam PF12860 PAS fold 218 330 2.7E-18 T 22-04-2016 NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 SMART SM00052 507 749 1.6E-95 T 22-04-2016 IPR001633 EAL domain NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 Gene3D G3DSA:3.30.450.20 213 326 3.9E-5 T 22-04-2016 NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 Pfam PF00563 EAL domain 514 744 7.7E-66 T 22-04-2016 IPR001633 EAL domain NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 SMART SM00267 326 497 6.5E-63 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS18020 68372e37778a3effc4fa4db0f1eeab45 776 Gene3D G3DSA:3.30.70.270 339 504 5.9E-55 T 22-04-2016 NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 Gene3D G3DSA:3.40.50.720 290 479 8.3E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 600 687 4.9E-10 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 478 564 1.7E-20 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 92 112 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 298 474 2.9E-58 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 PANTHER PTHR23309:SF9 2 699 0.0 T 22-04-2016 NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 SUPERFAMILY SSF51735 294 474 2.37E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 Gene3D G3DSA:3.90.226.10 3 280 2.1E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 SUPERFAMILY SSF48179 477 578 5.1E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 PANTHER PTHR23309 2 699 0.0 T 22-04-2016 NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 174 1.4E-36 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 SUPERFAMILY SSF52096 3 288 2.72E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 Gene3D G3DSA:1.10.1040.10 480 565 5.4E-16 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 Gene3D G3DSA:1.10.1040.10 606 689 6.2E-20 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NHAM_RS01865 fb254d61c642529736e68ab3a4b283a4 707 SUPERFAMILY SSF48179 596 688 2.47E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Gene3D G3DSA:1.20.1580.10 751 877 1.9E-52 T 22-04-2016 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 PANTHER PTHR32282 300 1011 0.0 T 22-04-2016 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 PANTHER PTHR32282 15 255 0.0 T 22-04-2016 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Pfam PF00005 ABC transporter 847 917 2.4E-6 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Gene3D G3DSA:1.20.1580.10 464 536 1.6E-51 T 22-04-2016 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Gene3D G3DSA:1.20.1580.10 308 341 1.6E-51 T 22-04-2016 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Gene3D G3DSA:1.20.1580.10 106 144 1.6E-51 T 22-04-2016 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Gene3D G3DSA:1.10.8.280 344 463 8.2E-42 T 22-04-2016 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 SUPERFAMILY SSF52540 679 968 2.33E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Gene3D G3DSA:3.30.1490.20 215 254 2.0E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Gene3D G3DSA:3.30.1490.20 145 168 2.0E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Gene3D G3DSA:3.40.50.300 878 998 1.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Gene3D G3DSA:3.40.50.300 10 66 8.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Gene3D G3DSA:3.40.50.300 537 654 8.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Gene3D G3DSA:3.40.50.300 661 734 1.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 19 982 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 ProSitePatterns PS00211 ABC transporters family signature. 887 901 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 ProSitePatterns PS00211 ABC transporters family signature. 546 560 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 Hamap MF_00205 UvrABC system protein A [uvrA]. 16 997 22.63 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 SUPERFAMILY SSF52540 19 219 3.61E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 SUPERFAMILY SSF52540 490 628 3.61E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 PANTHER PTHR32282:SF2 300 1011 0.0 T 22-04-2016 NHAM_RS10595 644707f8b90689a7852cf7b17d92e5d7 1013 PANTHER PTHR32282:SF2 15 255 0.0 T 22-04-2016 NHAM_RS06590 da406373711466c5dd55127b254edf39 234 SUPERFAMILY SSF56529 25 229 7.2E-70 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NHAM_RS06590 da406373711466c5dd55127b254edf39 234 PANTHER PTHR11820:SF7 27 231 4.7E-89 T 22-04-2016 NHAM_RS06590 da406373711466c5dd55127b254edf39 234 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 29 229 7.4E-50 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NHAM_RS06590 da406373711466c5dd55127b254edf39 234 PANTHER PTHR11820 27 231 4.7E-89 T 22-04-2016 NHAM_RS06590 da406373711466c5dd55127b254edf39 234 Gene3D G3DSA:3.90.850.10 25 231 3.8E-77 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 Gene3D G3DSA:3.40.50.740 565 636 2.1E-48 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 Gene3D G3DSA:3.40.50.740 671 751 2.1E-48 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 PANTHER PTHR11615:SF35 976 1209 1.7E-287 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 PANTHER PTHR11615:SF35 672 808 1.7E-287 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 PANTHER PTHR11615:SF35 825 849 1.7E-287 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 PANTHER PTHR11615:SF35 17 395 1.7E-287 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1105 1132 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 Pfam PF00384 Molybdopterin oxidoreductase 91 805 1.2E-121 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 Pfam PF01568 Molydopterin dinucleotide binding domain 1067 1176 1.1E-20 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 SUPERFAMILY SSF53706 6 1055 7.54E-298 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 PANTHER PTHR11615 976 1209 1.7E-287 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 PANTHER PTHR11615 672 808 1.7E-287 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 PANTHER PTHR11615 825 849 1.7E-287 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 PANTHER PTHR11615 17 395 1.7E-287 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 Gene3D G3DSA:3.40.228.10 465 564 2.3E-72 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 Gene3D G3DSA:3.40.228.10 204 319 2.3E-72 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 SMART SM00926 26 88 0.0015 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 SUPERFAMILY SSF50692 1064 1212 1.11E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 Gene3D G3DSA:3.40.50.740 132 173 7.6E-5 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 Gene3D G3DSA:3.40.50.740 91 100 7.6E-5 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 Gene3D G3DSA:3.90.55.10 752 814 1.7E-5 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 Gene3D G3DSA:2.20.25.90 35 81 8.5E-28 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 Gene3D G3DSA:2.40.40.20 1036 1213 7.9E-39 T 22-04-2016 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 11 1214 0.0 T 22-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 NHAM_RS04880 f26aac476af98af2b486e83067f6987d 1214 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 31 49 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 4.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 4.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 4.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 PANTHER PTHR24423:SF474 28 39 1.0E-59 T 22-04-2016 NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 PANTHER PTHR24423:SF474 151 432 1.0E-59 T 22-04-2016 NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 Gene3D G3DSA:1.10.287.130 205 275 7.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 Gene3D G3DSA:3.30.565.10 281 430 4.1E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 Pfam PF08521 Two-component sensor kinase N-terminal 58 135 2.5E-4 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 SUPERFAMILY SSF55874 269 430 2.49E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 430 1.1E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 SUPERFAMILY SSF47384 197 277 3.92E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 SMART SM00387 323 432 9.6E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 PANTHER PTHR24423 28 39 1.0E-59 T 22-04-2016 NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 PANTHER PTHR24423 151 432 1.0E-59 T 22-04-2016 NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 SMART SM00388 214 279 2.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS16875 c84cbf320a2dc221ce6db7991fb99cec 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 278 1.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 SUPERFAMILY SSF50249 22 121 7.55E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 PANTHER PTHR10724:SF6 11 523 2.6E-230 T 22-04-2016 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 SMART SM00316 28 96 4.0E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 SMART SM00316 457 529 8.1E-14 T 22-04-2016 IPR022967 RNA-binding domain, S1 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 SMART SM00316 371 443 1.9E-19 T 22-04-2016 IPR022967 RNA-binding domain, S1 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 SMART SM00316 284 356 2.3E-23 T 22-04-2016 IPR022967 RNA-binding domain, S1 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 SMART SM00316 199 269 5.2E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 SMART SM00316 112 180 2.7E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 Gene3D G3DSA:2.40.50.140 366 446 4.0E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 Gene3D G3DSA:2.40.50.140 184 273 1.8E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 Gene3D G3DSA:2.40.50.140 111 181 5.1E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 Gene3D G3DSA:2.40.50.140 455 530 1.6E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 SUPERFAMILY SSF50249 351 449 1.64E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 SUPERFAMILY SSF50249 198 285 3.09E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 Pfam PF00575 S1 RNA binding domain 369 443 2.4E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 Pfam PF00575 S1 RNA binding domain 198 269 3.8E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 Pfam PF00575 S1 RNA binding domain 456 529 2.2E-12 T 22-04-2016 IPR003029 S1 domain GO:0003676 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 Pfam PF00575 S1 RNA binding domain 112 180 2.6E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 Pfam PF00575 S1 RNA binding domain 286 356 2.6E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 Pfam PF00575 S1 RNA binding domain 29 95 3.9E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 PIRSF PIRSF002111 2 543 8.9E-194 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 SUPERFAMILY SSF50249 112 194 5.61E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 SUPERFAMILY SSF50249 264 380 3.65E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 PANTHER PTHR10724 11 523 2.6E-230 T 22-04-2016 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 13 529 2.0E-189 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 PRINTS PR00681 Ribosomal protein S1 signature 117 133 1.4E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 PRINTS PR00681 Ribosomal protein S1 signature 164 184 1.4E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 PRINTS PR00681 Ribosomal protein S1 signature 221 242 1.4E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 PRINTS PR00681 Ribosomal protein S1 signature 30 48 1.4E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 PRINTS PR00681 Ribosomal protein S1 signature 48 62 1.4E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 PRINTS PR00681 Ribosomal protein S1 signature 135 152 1.4E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 PRINTS PR00681 Ribosomal protein S1 signature 299 318 1.4E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 PRINTS PR00681 Ribosomal protein S1 signature 93 112 1.4E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 PRINTS PR00681 Ribosomal protein S1 signature 339 357 1.4E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 SUPERFAMILY SSF50249 438 543 4.46E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 Gene3D G3DSA:2.40.50.140 31 110 4.8E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00815 00eb800101d838cb5451431550e989f8 566 Gene3D G3DSA:2.40.50.140 288 365 8.0E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 Gene3D G3DSA:3.40.50.1000 431 560 4.6E-34 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 Gene3D G3DSA:3.40.50.1000 279 322 4.6E-34 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 65 605 3.9E-149 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 Gene3D G3DSA:2.70.150.10 96 215 1.4E-18 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 SUPERFAMILY SSF81653 117 214 1.19E-20 T 22-04-2016 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 308 314 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 Pfam PF00122 E1-E2 ATPase 86 297 4.7E-51 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 SUPERFAMILY SSF56784 363 604 2.38E-41 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 SUPERFAMILY SSF56784 305 324 2.38E-41 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 PANTHER PTHR24093 10 608 4.2E-107 T 22-04-2016 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 PANTHER PTHR24093:SF126 10 608 4.2E-107 T 22-04-2016 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 87 329 5.5E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 388 580 3.1E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 503 519 1.2E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 535 560 1.2E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 Pfam PF00702 haloacid dehalogenase-like hydrolase 305 517 2.4E-26 T 22-04-2016 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 164 178 2.9E-23 T 22-04-2016 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 306 320 2.9E-23 T 22-04-2016 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 527 539 2.9E-23 T 22-04-2016 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 503 522 2.9E-23 T 22-04-2016 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 451 461 2.9E-23 T 22-04-2016 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 SUPERFAMILY SSF81665 215 300 2.75E-10 T 22-04-2016 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 SUPERFAMILY SSF81665 73 118 2.75E-10 T 22-04-2016 NHAM_RS09935 f7f621eff9108f1397e2dc0690879873 618 Gene3D G3DSA:3.40.1110.10 323 430 3.5E-8 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 PRINTS PR00145 Argininosuccinate lyase family signature 264 280 1.5E-5 T 22-04-2016 NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 PRINTS PR00145 Argininosuccinate lyase family signature 131 151 1.5E-5 T 22-04-2016 NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 PRINTS PR00145 Argininosuccinate lyase family signature 219 243 1.5E-5 T 22-04-2016 NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 432 3.4E-152 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 Gene3D G3DSA:1.20.200.10 94 359 1.1E-86 T 22-04-2016 NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 ProSitePatterns PS00163 Fumarate lyases signature. 264 273 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 PANTHER PTHR11444 4 427 1.9E-144 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 Pfam PF10397 Adenylosuccinate lyase C-terminus 353 431 2.6E-25 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 Gene3D G3DSA:1.10.40.30 360 432 4.1E-35 T 22-04-2016 NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 PRINTS PR00149 Fumarate lyase superfamily signature 91 109 4.5E-25 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 4.5E-25 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 PRINTS PR00149 Fumarate lyase superfamily signature 219 246 4.5E-25 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 PRINTS PR00149 Fumarate lyase superfamily signature 264 280 4.5E-25 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 Gene3D G3DSA:1.10.275.10 2 93 1.0E-33 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 SUPERFAMILY SSF48557 3 432 1.51E-129 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 PANTHER PTHR11444:SF2 4 427 1.9E-144 T 22-04-2016 NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 SMART SM00998 352 432 3.2E-38 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 NHAM_RS13140 74bbe1a9b26d6e26ff14534530609c22 435 Pfam PF00206 Lyase 7 287 3.3E-52 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal NHAM_RS03120 d634fade64e2e747ced55aca7107b01b 375 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 13 266 4.8E-64 T 22-04-2016 IPR031009 Three-Cys-motif partner protein NHAM_RS18185 6b5a899dde3830e47b96a50a3d35bf63 593 Pfam PF00005 ABC transporter 370 519 1.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS18185 6b5a899dde3830e47b96a50a3d35bf63 593 PANTHER PTHR24221 11 592 1.2E-241 T 22-04-2016 NHAM_RS18185 6b5a899dde3830e47b96a50a3d35bf63 593 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 17 590 8.9E-270 T 22-04-2016 IPR011918 ABC transporter, ATP-binding/permease protein NHAM_RS18185 6b5a899dde3830e47b96a50a3d35bf63 593 SUPERFAMILY SSF90123 23 339 1.05E-74 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS18185 6b5a899dde3830e47b96a50a3d35bf63 593 SMART SM00382 379 551 1.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS18185 6b5a899dde3830e47b96a50a3d35bf63 593 Pfam PF00664 ABC transporter transmembrane region 35 300 1.8E-53 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS18185 6b5a899dde3830e47b96a50a3d35bf63 593 SUPERFAMILY SSF52540 344 590 3.02E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18185 6b5a899dde3830e47b96a50a3d35bf63 593 Gene3D G3DSA:1.20.1560.10 23 338 6.2E-79 T 22-04-2016 NHAM_RS18185 6b5a899dde3830e47b96a50a3d35bf63 593 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS18185 6b5a899dde3830e47b96a50a3d35bf63 593 Gene3D G3DSA:3.40.50.300 352 584 5.1E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10320 2527d4c28f0aeb23edc803f8c9e93801 177 Gene3D G3DSA:3.20.16.10 22 88 1.2E-4 T 22-04-2016 NHAM_RS10320 2527d4c28f0aeb23edc803f8c9e93801 177 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 20 156 1.6E-36 T 22-04-2016 IPR006433 Prohead protease NHAM_RS10320 2527d4c28f0aeb23edc803f8c9e93801 177 Pfam PF04586 Caudovirus prohead serine protease 11 156 2.0E-35 T 22-04-2016 IPR006433 Prohead protease NHAM_RS10320 2527d4c28f0aeb23edc803f8c9e93801 177 SUPERFAMILY SSF50789 22 171 1.98E-8 T 22-04-2016 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 PANTHER PTHR11817 2 470 4.0E-192 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 PRINTS PR01050 Pyruvate kinase family signature 214 240 9.0E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 PRINTS PR01050 Pyruvate kinase family signature 241 265 9.0E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 PRINTS PR01050 Pyruvate kinase family signature 291 309 9.0E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 PRINTS PR01050 Pyruvate kinase family signature 310 326 9.0E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 PRINTS PR01050 Pyruvate kinase family signature 62 78 9.0E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 PRINTS PR01050 Pyruvate kinase family signature 187 201 9.0E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 PRINTS PR01050 Pyruvate kinase family signature 266 290 9.0E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 SUPERFAMILY SSF50800 73 167 2.79E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 Pfam PF00224 Pyruvate kinase, barrel domain 5 334 1.5E-103 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 Gene3D G3DSA:3.20.20.60 169 322 7.2E-91 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 Gene3D G3DSA:3.20.20.60 5 75 7.2E-91 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 2.7E-33 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 SUPERFAMILY SSF52935 320 471 6.15E-38 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 Gene3D G3DSA:2.40.33.10 76 168 2.4E-26 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 468 1.2E-141 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 Gene3D G3DSA:3.40.1380.20 323 467 9.2E-44 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 ProSitePatterns PS00110 Pyruvate kinase active site signature. 212 224 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 SUPERFAMILY SSF51621 2 78 1.5E-91 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS06225 e3cdf8139fdc71b7bed0451272d05fac 478 SUPERFAMILY SSF51621 168 338 1.5E-91 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS00325 ba8e1ebf8a34cdd0da1e146a3228178f 101 PANTHER PTHR33175 1 94 9.9E-46 T 22-04-2016 NHAM_RS00325 ba8e1ebf8a34cdd0da1e146a3228178f 101 SMART SM00411 1 91 4.5E-41 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS00325 ba8e1ebf8a34cdd0da1e146a3228178f 101 Gene3D G3DSA:4.10.520.10 1 93 4.2E-34 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NHAM_RS00325 ba8e1ebf8a34cdd0da1e146a3228178f 101 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.373 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 NHAM_RS00325 ba8e1ebf8a34cdd0da1e146a3228178f 101 PANTHER PTHR33175:SF5 1 94 9.9E-46 T 22-04-2016 NHAM_RS00325 ba8e1ebf8a34cdd0da1e146a3228178f 101 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 2.7E-44 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 NHAM_RS00325 ba8e1ebf8a34cdd0da1e146a3228178f 101 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 NHAM_RS00325 ba8e1ebf8a34cdd0da1e146a3228178f 101 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 8.8E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS00325 ba8e1ebf8a34cdd0da1e146a3228178f 101 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 8.8E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS00325 ba8e1ebf8a34cdd0da1e146a3228178f 101 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 8.8E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS00325 ba8e1ebf8a34cdd0da1e146a3228178f 101 Pfam PF00216 Bacterial DNA-binding protein 1 91 3.5E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS00325 ba8e1ebf8a34cdd0da1e146a3228178f 101 SUPERFAMILY SSF47729 1 94 1.91E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NHAM_RS07965 7bc6669043389ea04cc197c858900508 104 Pfam PF00467 KOW motif 7 25 6.9E-6 T 22-04-2016 IPR005824 KOW NHAM_RS07965 7bc6669043389ea04cc197c858900508 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 96 20.354 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07965 7bc6669043389ea04cc197c858900508 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 102 2.0E-24 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07965 7bc6669043389ea04cc197c858900508 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 102 3.1E-34 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07965 7bc6669043389ea04cc197c858900508 104 SMART SM00739 4 31 9.9E-5 T 22-04-2016 IPR005824 KOW NHAM_RS07965 7bc6669043389ea04cc197c858900508 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07965 7bc6669043389ea04cc197c858900508 104 SUPERFAMILY SSF50104 2 98 4.38E-30 T 22-04-2016 IPR008991 Translation protein SH3-like domain NHAM_RS07965 7bc6669043389ea04cc197c858900508 104 Gene3D G3DSA:2.30.30.30 3 90 1.1E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 NHAM_RS07965 7bc6669043389ea04cc197c858900508 104 PANTHER PTHR12903 4 103 3.2E-39 T 22-04-2016 NHAM_RS08315 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13358 DDE superfamily endonuclease 177 322 7.1E-21 T 22-04-2016 NHAM_RS08315 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347:SF1 12 355 3.1E-99 T 22-04-2016 NHAM_RS08315 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13565 Homeodomain-like domain 64 136 1.1E-8 T 22-04-2016 NHAM_RS08315 9ebd61e02b14dd6d97542026b3314d03 364 SUPERFAMILY SSF46689 30 140 3.14E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS08315 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347 12 355 3.1E-99 T 22-04-2016 NHAM_RS08315 9ebd61e02b14dd6d97542026b3314d03 364 Gene3D G3DSA:3.30.420.10 206 338 1.3E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS12490 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13358 DDE superfamily endonuclease 177 322 7.1E-21 T 22-04-2016 NHAM_RS12490 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347:SF1 12 355 3.1E-99 T 22-04-2016 NHAM_RS12490 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13565 Homeodomain-like domain 64 136 1.1E-8 T 22-04-2016 NHAM_RS12490 9ebd61e02b14dd6d97542026b3314d03 364 SUPERFAMILY SSF46689 30 140 3.14E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS12490 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347 12 355 3.1E-99 T 22-04-2016 NHAM_RS12490 9ebd61e02b14dd6d97542026b3314d03 364 Gene3D G3DSA:3.30.420.10 206 338 1.3E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS14520 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13358 DDE superfamily endonuclease 177 322 7.1E-21 T 22-04-2016 NHAM_RS14520 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347:SF1 12 355 3.1E-99 T 22-04-2016 NHAM_RS14520 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13565 Homeodomain-like domain 64 136 1.1E-8 T 22-04-2016 NHAM_RS14520 9ebd61e02b14dd6d97542026b3314d03 364 SUPERFAMILY SSF46689 30 140 3.14E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS14520 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347 12 355 3.1E-99 T 22-04-2016 NHAM_RS14520 9ebd61e02b14dd6d97542026b3314d03 364 Gene3D G3DSA:3.30.420.10 206 338 1.3E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS12850 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13358 DDE superfamily endonuclease 177 322 7.1E-21 T 22-04-2016 NHAM_RS12850 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347:SF1 12 355 3.1E-99 T 22-04-2016 NHAM_RS12850 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13565 Homeodomain-like domain 64 136 1.1E-8 T 22-04-2016 NHAM_RS12850 9ebd61e02b14dd6d97542026b3314d03 364 SUPERFAMILY SSF46689 30 140 3.14E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS12850 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347 12 355 3.1E-99 T 22-04-2016 NHAM_RS12850 9ebd61e02b14dd6d97542026b3314d03 364 Gene3D G3DSA:3.30.420.10 206 338 1.3E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS08320 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13358 DDE superfamily endonuclease 177 322 7.1E-21 T 22-04-2016 NHAM_RS08320 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347:SF1 12 355 3.1E-99 T 22-04-2016 NHAM_RS08320 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13565 Homeodomain-like domain 64 136 1.1E-8 T 22-04-2016 NHAM_RS08320 9ebd61e02b14dd6d97542026b3314d03 364 SUPERFAMILY SSF46689 30 140 3.14E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS08320 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347 12 355 3.1E-99 T 22-04-2016 NHAM_RS08320 9ebd61e02b14dd6d97542026b3314d03 364 Gene3D G3DSA:3.30.420.10 206 338 1.3E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS16245 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13358 DDE superfamily endonuclease 177 322 7.1E-21 T 22-04-2016 NHAM_RS16245 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347:SF1 12 355 3.1E-99 T 22-04-2016 NHAM_RS16245 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13565 Homeodomain-like domain 64 136 1.1E-8 T 22-04-2016 NHAM_RS16245 9ebd61e02b14dd6d97542026b3314d03 364 SUPERFAMILY SSF46689 30 140 3.14E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS16245 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347 12 355 3.1E-99 T 22-04-2016 NHAM_RS16245 9ebd61e02b14dd6d97542026b3314d03 364 Gene3D G3DSA:3.30.420.10 206 338 1.3E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS04505 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13358 DDE superfamily endonuclease 177 322 7.1E-21 T 22-04-2016 NHAM_RS04505 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347:SF1 12 355 3.1E-99 T 22-04-2016 NHAM_RS04505 9ebd61e02b14dd6d97542026b3314d03 364 Pfam PF13565 Homeodomain-like domain 64 136 1.1E-8 T 22-04-2016 NHAM_RS04505 9ebd61e02b14dd6d97542026b3314d03 364 SUPERFAMILY SSF46689 30 140 3.14E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS04505 9ebd61e02b14dd6d97542026b3314d03 364 PANTHER PTHR30347 12 355 3.1E-99 T 22-04-2016 NHAM_RS04505 9ebd61e02b14dd6d97542026b3314d03 364 Gene3D G3DSA:3.30.420.10 206 338 1.3E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS10745 dd3649a289df1e7ea0f10a231f6c2d47 219 PANTHER PTHR10134:SF8 20 207 3.4E-64 T 22-04-2016 NHAM_RS10745 dd3649a289df1e7ea0f10a231f6c2d47 219 Gene3D G3DSA:1.20.5.510 15 50 1.5E-15 T 22-04-2016 NHAM_RS10745 dd3649a289df1e7ea0f10a231f6c2d47 219 PANTHER PTHR10134 20 207 3.4E-64 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 NHAM_RS10745 dd3649a289df1e7ea0f10a231f6c2d47 219 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.9E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NHAM_RS10745 dd3649a289df1e7ea0f10a231f6c2d47 219 PRINTS PR00162 Rieske 2Fe-2S subunit signature 131 142 3.9E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NHAM_RS10745 dd3649a289df1e7ea0f10a231f6c2d47 219 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 19 203 4.9E-65 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 NHAM_RS10745 dd3649a289df1e7ea0f10a231f6c2d47 219 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 45 1.9E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NHAM_RS10745 dd3649a289df1e7ea0f10a231f6c2d47 219 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 13 50 1.8E-18 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 NHAM_RS10745 dd3649a289df1e7ea0f10a231f6c2d47 219 SUPERFAMILY SSF50022 41 202 1.81E-35 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS10745 dd3649a289df1e7ea0f10a231f6c2d47 219 Gene3D G3DSA:2.102.10.10 59 201 3.7E-33 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS10745 dd3649a289df1e7ea0f10a231f6c2d47 219 Pfam PF00355 Rieske [2Fe-2S] domain 65 190 1.2E-10 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS18630 d22dad690e2f27dda0520f3f46375c39 124 PANTHER PTHR36849:SF1 6 124 8.7E-47 T 22-04-2016 NHAM_RS18630 d22dad690e2f27dda0520f3f46375c39 124 Pfam PF04343 Protein of unknown function, DUF488 11 118 6.7E-32 T 22-04-2016 IPR007438 Protein of unknown function DUF488 NHAM_RS18630 d22dad690e2f27dda0520f3f46375c39 124 PANTHER PTHR36849 6 124 8.7E-47 T 22-04-2016 NHAM_RS24130 67dca79d9f58b750f2d78b26d18ff3bf 240 Gene3D G3DSA:2.10.109.10 128 215 4.1E-9 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NHAM_RS24130 67dca79d9f58b750f2d78b26d18ff3bf 240 Pfam PF00717 Peptidase S24-like 152 220 2.4E-9 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B NHAM_RS24130 67dca79d9f58b750f2d78b26d18ff3bf 240 Gene3D G3DSA:1.10.260.40 9 86 7.5E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS24130 67dca79d9f58b750f2d78b26d18ff3bf 240 SUPERFAMILY SSF47413 2 77 1.22E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS24130 67dca79d9f58b750f2d78b26d18ff3bf 240 SMART SM00530 10 71 7.2E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS24130 67dca79d9f58b750f2d78b26d18ff3bf 240 SUPERFAMILY SSF51306 127 220 8.76E-10 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 175 193 5.0E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 69 92 5.0E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 5.0E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 21 46 5.0E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 388 407 5.0E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 325 346 5.0E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 360 378 5.0E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 204 223 5.0E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 438 459 5.0E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 144 156 5.0E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 5.0E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 121 5.0E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 SUPERFAMILY SSF81442 17 533 4.32E-221 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 Gene3D G3DSA:1.20.210.10 33 501 9.8E-232 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 22 533 3.4E-221 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PANTHER PTHR10422:SF27 7 534 0.0 T 22-04-2016 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 30 480 1.8E-159 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS18690 9325d74a658d3b67ec8e34706ffab2c0 534 PANTHER PTHR10422 7 534 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01465 476a43d300e3f706e5b54b059a7ab56f 457 SUPERFAMILY SSF53098 56 406 8.34E-17 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS01465 476a43d300e3f706e5b54b059a7ab56f 457 Pfam PF13546 DDE superfamily endonuclease 30 293 3.2E-83 T 22-04-2016 NHAM_RS01465 476a43d300e3f706e5b54b059a7ab56f 457 PANTHER PTHR33627 2 449 1.9E-175 T 22-04-2016 NHAM_RS01465 476a43d300e3f706e5b54b059a7ab56f 457 PANTHER PTHR33627:SF1 2 449 1.9E-175 T 22-04-2016 NHAM_RS09785 c9166a78efe32a3b0f046687bf911173 146 Pfam PF00571 CBS domain 10 60 2.9E-8 T 22-04-2016 IPR000644 CBS domain NHAM_RS09785 c9166a78efe32a3b0f046687bf911173 146 Pfam PF00571 CBS domain 81 136 1.1E-12 T 22-04-2016 IPR000644 CBS domain NHAM_RS09785 c9166a78efe32a3b0f046687bf911173 146 SUPERFAMILY SSF54631 4 139 1.16E-30 T 22-04-2016 NHAM_RS09785 c9166a78efe32a3b0f046687bf911173 146 SMART SM00116 16 63 2.3E-7 T 22-04-2016 IPR000644 CBS domain NHAM_RS09785 c9166a78efe32a3b0f046687bf911173 146 SMART SM00116 88 136 2.3E-13 T 22-04-2016 IPR000644 CBS domain NHAM_RS09785 c9166a78efe32a3b0f046687bf911173 146 PANTHER PTHR11911 4 137 3.8E-23 T 22-04-2016 NHAM_RS09785 c9166a78efe32a3b0f046687bf911173 146 Gene3D G3DSA:3.20.20.70 6 137 1.4E-27 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS05025 a36d86af00d8054f8cd02001499626c4 459 PANTHER PTHR10151:SF67 272 407 4.7E-91 T 22-04-2016 NHAM_RS05025 a36d86af00d8054f8cd02001499626c4 459 PANTHER PTHR10151 169 254 4.7E-91 T 22-04-2016 IPR024873 Ectonucleotide pyrophosphatase/phosphodiesterase family NHAM_RS05025 a36d86af00d8054f8cd02001499626c4 459 PANTHER PTHR10151 22 135 4.7E-91 T 22-04-2016 IPR024873 Ectonucleotide pyrophosphatase/phosphodiesterase family NHAM_RS05025 a36d86af00d8054f8cd02001499626c4 459 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 4 372 3.1E-51 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 NHAM_RS05025 a36d86af00d8054f8cd02001499626c4 459 PANTHER PTHR10151 272 407 4.7E-91 T 22-04-2016 IPR024873 Ectonucleotide pyrophosphatase/phosphodiesterase family NHAM_RS05025 a36d86af00d8054f8cd02001499626c4 459 SUPERFAMILY SSF53649 2 413 8.94E-68 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NHAM_RS05025 a36d86af00d8054f8cd02001499626c4 459 Gene3D G3DSA:3.30.1360.110 295 357 1.1E-8 T 22-04-2016 IPR023116 Phosphonoacetate hydrolase, insert domain GO:0047400 NHAM_RS05025 a36d86af00d8054f8cd02001499626c4 459 Gene3D G3DSA:3.40.720.10 2 294 1.7E-40 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NHAM_RS05025 a36d86af00d8054f8cd02001499626c4 459 PANTHER PTHR10151:SF67 169 254 4.7E-91 T 22-04-2016 NHAM_RS05025 a36d86af00d8054f8cd02001499626c4 459 PANTHER PTHR10151:SF67 22 135 4.7E-91 T 22-04-2016 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 PRINTS PR00148 Enolase signature 363 380 1.51E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 PRINTS PR00148 Enolase signature 311 322 1.51E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 PRINTS PR00148 Enolase signature 161 174 1.51E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 PRINTS PR00148 Enolase signature 107 123 1.51E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 PRINTS PR00148 Enolase signature 37 51 1.51E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 PRINTS PR00148 Enolase signature 334 348 1.51E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 SUPERFAMILY SSF54826 4 137 3.03E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 Hamap MF_00318 Enolase [eno]. 2 411 43.321 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 PANTHER PTHR11902 1 420 6.0E-246 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 Pfam PF03952 Enolase, N-terminal domain 4 134 1.1E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 SMART SM01192 139 425 1.1E-217 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 424 3.2E-127 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 SMART SM01193 4 134 1.4E-90 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 423 2.4E-202 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 Gene3D G3DSA:3.30.390.10 4 125 9.9E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 SUPERFAMILY SSF51604 139 422 1.09E-123 T 22-04-2016 IPR029065 Enolase C-terminal domain-like NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 ProSitePatterns PS00164 Enolase signature. 334 347 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 PIRSF PIRSF001400 1 425 1.2E-186 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS08910 01b574ea733c8875d529b9d7166a7b6b 427 Gene3D G3DSA:3.20.20.120 128 424 9.7E-131 T 22-04-2016 IPR029065 Enolase C-terminal domain-like NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 SMART SM01008 214 295 6.9E-20 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 54 177 1.6E-23 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 316 604 1.1E-30 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 608 688 1.6E-18 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 PIRSF PIRSF036389 1 742 7.3E-189 T 22-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 Gene3D G3DSA:3.30.365.10 557 744 2.2E-40 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 PANTHER PTHR11908 152 744 2.8E-162 T 22-04-2016 NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 PANTHER PTHR11908:SF22 152 744 2.8E-162 T 22-04-2016 NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 Gene3D G3DSA:3.90.1170.50 194 289 8.5E-22 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 Gene3D G3DSA:3.30.365.10 53 193 1.1E-35 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 SUPERFAMILY SSF56003 5 247 3.59E-39 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 Gene3D G3DSA:3.30.365.10 387 556 2.6E-41 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06025 6a3cae07e4427209f51dd758e2555916 746 SUPERFAMILY SSF56003 315 744 3.14E-112 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS15880 9244ef25aed709f7165c47c175a59da7 291 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 9 270 18.483 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 NHAM_RS15880 9244ef25aed709f7165c47c175a59da7 291 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 269 4.4E-68 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 NHAM_RS15880 9244ef25aed709f7165c47c175a59da7 291 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 12 264 8.7E-74 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 NHAM_RS15880 9244ef25aed709f7165c47c175a59da7 291 PANTHER PTHR30589 1 290 2.2E-95 T 22-04-2016 NHAM_RS15880 9244ef25aed709f7165c47c175a59da7 291 PANTHER PTHR30589:SF0 1 290 2.2E-95 T 22-04-2016 NHAM_RS15880 9244ef25aed709f7165c47c175a59da7 291 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 146 158 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 NHAM_RS19110 fdc23934873691d5c2199bcbb865a40f 140 Pfam PF09278 MerR, DNA binding 49 112 7.9E-23 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding NHAM_RS19110 fdc23934873691d5c2199bcbb865a40f 140 Gene3D G3DSA:1.10.1660.10 5 60 2.0E-24 T 22-04-2016 NHAM_RS19110 fdc23934873691d5c2199bcbb865a40f 140 PANTHER PTHR30204 1 132 2.0E-38 T 22-04-2016 NHAM_RS19110 fdc23934873691d5c2199bcbb865a40f 140 SMART SM00422 6 75 6.6E-27 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NHAM_RS19110 fdc23934873691d5c2199bcbb865a40f 140 PANTHER PTHR30204:SF16 1 132 2.0E-38 T 22-04-2016 NHAM_RS19110 fdc23934873691d5c2199bcbb865a40f 140 Pfam PF00376 MerR family regulatory protein 8 44 4.5E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NHAM_RS19110 fdc23934873691d5c2199bcbb865a40f 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 18 31 1.5E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NHAM_RS19110 fdc23934873691d5c2199bcbb865a40f 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 1.5E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NHAM_RS19110 fdc23934873691d5c2199bcbb865a40f 140 Gene3D G3DSA:1.10.1660.10 61 135 4.5E-32 T 22-04-2016 NHAM_RS19110 fdc23934873691d5c2199bcbb865a40f 140 SUPERFAMILY SSF46955 7 131 6.23E-39 T 22-04-2016 IPR009061 Putative DNA-binding domain NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 SUPERFAMILY SSF81901 88 327 2.35E-47 T 22-04-2016 NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 Pfam PF08238 Sel1 repeat 112 146 1.5E-10 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 Pfam PF08238 Sel1 repeat 219 254 4.7E-5 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 Pfam PF08238 Sel1 repeat 183 218 2.5E-5 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 Pfam PF08238 Sel1 repeat 148 181 0.011 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 Pfam PF08238 Sel1 repeat 292 317 5.0 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 Pfam PF08238 Sel1 repeat 258 290 0.0011 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 Gene3D G3DSA:1.25.40.10 88 326 1.6E-57 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 PANTHER PTHR11102:SF11 89 353 1.7E-61 T 22-04-2016 NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 SMART SM00671 111 146 3.2E-9 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 SMART SM00671 147 182 2.6 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 SMART SM00671 255 290 0.0086 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 SMART SM00671 291 328 270.0 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 SMART SM00671 183 218 6.7E-7 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 SMART SM00671 219 254 1.2E-7 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS18145 4aa14e9ed770ccdd189ae38c391bb6d5 357 PANTHER PTHR11102 89 353 1.7E-61 T 22-04-2016 NHAM_RS17390 533c6f7c4819a8e28808529d2c4ee325 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 386 1.5E-44 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS17390 533c6f7c4819a8e28808529d2c4ee325 391 Gene3D G3DSA:1.20.140.10 227 389 4.3E-68 T 22-04-2016 NHAM_RS17390 533c6f7c4819a8e28808529d2c4ee325 391 PANTHER PTHR10909:SF332 12 388 1.1E-270 T 22-04-2016 NHAM_RS17390 533c6f7c4819a8e28808529d2c4ee325 391 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NHAM_RS17390 533c6f7c4819a8e28808529d2c4ee325 391 SUPERFAMILY SSF47203 236 388 3.54E-48 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS17390 533c6f7c4819a8e28808529d2c4ee325 391 Gene3D G3DSA:1.10.540.10 8 127 3.3E-45 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NHAM_RS17390 533c6f7c4819a8e28808529d2c4ee325 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 3.6E-26 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NHAM_RS17390 533c6f7c4819a8e28808529d2c4ee325 391 PANTHER PTHR10909 12 388 1.1E-270 T 22-04-2016 NHAM_RS17390 533c6f7c4819a8e28808529d2c4ee325 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 127 4.7E-39 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NHAM_RS17390 533c6f7c4819a8e28808529d2c4ee325 391 SUPERFAMILY SSF56645 9 251 2.36E-87 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NHAM_RS17390 533c6f7c4819a8e28808529d2c4ee325 391 Gene3D G3DSA:2.40.110.10 130 226 2.5E-40 T 22-04-2016 NHAM_RS14280 1a3b46b334ddb4df7d3aa71fd2c8b339 157 Gene3D G3DSA:1.10.10.60 49 77 7.5E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS14280 1a3b46b334ddb4df7d3aa71fd2c8b339 157 SUPERFAMILY SSF46689 45 147 3.76E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS14280 1a3b46b334ddb4df7d3aa71fd2c8b339 157 Pfam PF13565 Homeodomain-like domain 74 146 8.8E-9 T 22-04-2016 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 Gene3D G3DSA:3.50.30.10 460 564 1.6E-39 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 SUPERFAMILY SSF52009 444 570 1.05E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 PANTHER PTHR22931 41 937 0.0 T 22-04-2016 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 Gene3D G3DSA:1.10.189.10 402 459 3.2E-28 T 22-04-2016 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 Gene3D G3DSA:3.30.1490.20 48 159 9.1E-57 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 Gene3D G3DSA:3.30.1490.20 248 291 9.1E-57 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 Gene3D G3DSA:1.20.80.30 160 246 1.8E-32 T 22-04-2016 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 SUPERFAMILY SSF56059 47 438 4.12E-146 T 22-04-2016 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 Gene3D G3DSA:3.20.20.60 591 930 3.5E-138 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 Gene3D G3DSA:3.30.470.20 292 401 2.0E-38 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 PANTHER PTHR22931:SF9 41 937 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 819 837 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 SUPERFAMILY SSF51621 569 929 3.45E-130 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 66 414 3.7E-62 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 PIRSF PIRSF000853 46 937 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 Pfam PF00391 PEP-utilising enzyme, mobile domain 481 561 5.0E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 576 927 5.6E-89 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 508 519 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 NHAM_RS17990 5edff2ce202f2c84fa96b55e5072f99d 937 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 48 929 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 121 2.0E-32 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 457 30.517 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 Gene3D G3DSA:3.40.50.300 192 248 2.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 SUPERFAMILY SSF52540 73 164 4.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 SUPERFAMILY SSF52540 199 376 4.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 Pfam PF12631 MnmE helical domain 124 454 1.0E-48 T 22-04-2016 IPR025867 MnmE, helical domain NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 18 457 3.6E-80 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 Gene3D G3DSA:1.20.120.430 389 457 3.0E-52 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 Gene3D G3DSA:1.20.120.430 123 183 3.0E-52 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 Gene3D G3DSA:1.20.120.430 249 273 3.0E-52 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 Gene3D G3DSA:3.30.1360.120 4 122 3.4E-37 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 PANTHER PTHR11649 9 457 8.3E-162 T 22-04-2016 NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 Gene3D G3DSA:3.40.50.300 288 381 2.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 219 350 5.6E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 Pfam PF01926 50S ribosome-binding GTPase 221 317 1.3E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS00530 1ae6279969c2e89217bd4d0694d6ea7f 457 PANTHER PTHR11649:SF56 9 457 8.3E-162 T 22-04-2016 NHAM_RS12295 aee9620227ecac8a529e0f73cdb917b6 218 Pfam PF03374 Phage antirepressor protein KilAC domain 111 203 6.3E-14 T 22-04-2016 IPR005039 Antirepressor protein, C-terminal GO:0003677 NHAM_RS12295 aee9620227ecac8a529e0f73cdb917b6 218 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 1 80 2.1E-17 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family NHAM_RS16645 91a55d91852afce6188cc38ddc15c469 221 Pfam PF00293 NUDIX domain 60 173 3.8E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NHAM_RS16645 91a55d91852afce6188cc38ddc15c469 221 Gene3D G3DSA:3.90.79.10 53 219 1.0E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS16645 91a55d91852afce6188cc38ddc15c469 221 SUPERFAMILY SSF55811 58 211 3.52E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS16645 91a55d91852afce6188cc38ddc15c469 221 PANTHER PTHR12992 60 219 1.5E-47 T 22-04-2016 NHAM_RS01080 c5a900b6eb39591071cfd9759c684757 113 PANTHER PTHR36507 14 113 3.4E-21 T 22-04-2016 NHAM_RS01080 c5a900b6eb39591071cfd9759c684757 113 PANTHER PTHR36507:SF1 14 113 3.4E-21 T 22-04-2016 NHAM_RS01080 c5a900b6eb39591071cfd9759c684757 113 Pfam PF13473 Cupredoxin-like domain 27 111 1.3E-8 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain NHAM_RS01080 c5a900b6eb39591071cfd9759c684757 113 Gene3D G3DSA:2.60.40.420 18 111 5.4E-18 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS01080 c5a900b6eb39591071cfd9759c684757 113 SUPERFAMILY SSF49503 17 111 4.76E-21 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS09680 66b43db7f54df791ce2137022b2646a5 802 SUPERFAMILY SSF52518 5 372 3.75E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS09680 66b43db7f54df791ce2137022b2646a5 802 PANTHER PTHR31273:SF0 8 795 0.0 T 22-04-2016 NHAM_RS09680 66b43db7f54df791ce2137022b2646a5 802 Pfam PF09363 XFP C-terminal domain 589 791 3.1E-89 T 22-04-2016 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 NHAM_RS09680 66b43db7f54df791ce2137022b2646a5 802 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 402 577 1.6E-87 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 NHAM_RS09680 66b43db7f54df791ce2137022b2646a5 802 Hamap MF_01403 Probable phosphoketolase. 7 793 41.208 T 22-04-2016 IPR023962 Probable phosphoketolase NHAM_RS09680 66b43db7f54df791ce2137022b2646a5 802 PIRSF PIRSF017245 1 793 0.0 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 NHAM_RS09680 66b43db7f54df791ce2137022b2646a5 802 Pfam PF09364 XFP N-terminal domain 11 388 3.0E-190 T 22-04-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal NHAM_RS09680 66b43db7f54df791ce2137022b2646a5 802 Gene3D G3DSA:3.40.50.970 5 264 8.8E-19 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS09680 66b43db7f54df791ce2137022b2646a5 802 PANTHER PTHR31273 8 795 0.0 T 22-04-2016 NHAM_RS09680 66b43db7f54df791ce2137022b2646a5 802 SUPERFAMILY SSF52518 379 595 8.83E-28 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS09680 66b43db7f54df791ce2137022b2646a5 802 ProSitePatterns PS60003 Phosphoketolase signature 2. 159 177 - T 22-04-2016 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 NHAM_RS09680 66b43db7f54df791ce2137022b2646a5 802 ProSitePatterns PS60002 Phosphoketolase signature 1. 146 152 - T 22-04-2016 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 NHAM_RS08445 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS08445 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS17520 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS17520 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS17655 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS17655 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS02655 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS02655 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS09315 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS09315 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS03640 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS03640 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS07660 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS07660 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS11000 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS11000 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS05790 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS05790 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS13285 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS13285 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS15970 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS15970 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS16105 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS16105 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS16855 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS16855 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS18750 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS18750 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS18225 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS18225 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS05585 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS05585 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS17410 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS17410 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS07525 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF05598 Transposase domain (DUF772) 53 125 2.5E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS07525 a9504e507e7cd8d10abb8f02fba4fe83 369 Pfam PF01609 Transposase DDE domain 198 358 4.6E-12 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS16865 2710dd9c6e12f861e3557bb23423b8cb 771 Gene3D G3DSA:2.170.130.10 101 222 5.5E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS16865 2710dd9c6e12f861e3557bb23423b8cb 771 Gene3D G3DSA:2.40.170.20 230 771 1.8E-135 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS16865 2710dd9c6e12f861e3557bb23423b8cb 771 Pfam PF07715 TonB-dependent Receptor Plug Domain 121 216 1.7E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS16865 2710dd9c6e12f861e3557bb23423b8cb 771 Pfam PF00593 TonB dependent receptor 535 769 9.7E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS16865 2710dd9c6e12f861e3557bb23423b8cb 771 SUPERFAMILY SSF56935 106 771 4.16E-121 T 22-04-2016 NHAM_RS16865 2710dd9c6e12f861e3557bb23423b8cb 771 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 754 771 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site NHAM_RS16865 2710dd9c6e12f861e3557bb23423b8cb 771 PANTHER PTHR32552 26 54 2.0E-115 T 22-04-2016 NHAM_RS16865 2710dd9c6e12f861e3557bb23423b8cb 771 PANTHER PTHR32552 112 771 2.0E-115 T 22-04-2016 NHAM_RS16865 2710dd9c6e12f861e3557bb23423b8cb 771 PANTHER PTHR32552:SF10 26 54 2.0E-115 T 22-04-2016 NHAM_RS16865 2710dd9c6e12f861e3557bb23423b8cb 771 PANTHER PTHR32552:SF10 112 771 2.0E-115 T 22-04-2016 NHAM_RS16865 2710dd9c6e12f861e3557bb23423b8cb 771 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 122 771 6.0E-86 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 Gene3D G3DSA:1.10.1160.10 265 340 3.7E-32 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 342 530 4.7E-59 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 SUPERFAMILY SSF52374 14 339 3.85E-95 T 22-04-2016 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 PANTHER PTHR11451:SF29 11 249 3.5E-215 T 22-04-2016 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 PANTHER PTHR11451:SF29 269 552 3.5E-215 T 22-04-2016 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 30 337 1.7E-99 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 Gene3D G3DSA:2.40.240.10 350 464 1.6E-50 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 Gene3D G3DSA:3.90.800.10 103 211 2.0E-41 T 22-04-2016 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 SUPERFAMILY SSF50715 342 548 2.35E-71 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 52.121 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 Gene3D G3DSA:3.40.50.620 214 264 5.1E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 Gene3D G3DSA:3.40.50.620 30 98 5.1E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 36 47 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 30 552 8.7E-214 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 Gene3D G3DSA:2.40.240.10 465 548 1.8E-27 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 PANTHER PTHR11451 11 249 3.5E-215 T 22-04-2016 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 PANTHER PTHR11451 269 552 3.5E-215 T 22-04-2016 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 PRINTS PR00987 Glutamyl-tRNA synthetase signature 62 75 1.0E-6 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 222 1.0E-6 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS08730 3c7977a51fd485315665398c0408d2d9 558 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 45 1.0E-6 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 Gene3D G3DSA:1.10.1280.10 440 505 2.2E-51 T 22-04-2016 IPR008922 Uncharacterised domain, di-copper centre NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 Gene3D G3DSA:1.10.1280.10 339 408 2.2E-51 T 22-04-2016 IPR008922 Uncharacterised domain, di-copper centre NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 Gene3D G3DSA:1.10.1280.10 162 290 2.2E-51 T 22-04-2016 IPR008922 Uncharacterised domain, di-copper centre NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 Pfam PF00264 Common central domain of tyrosinase 201 471 9.2E-45 T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 PRINTS PR00092 Tyrosinase copper-binding domain signature 451 469 8.4E-9 T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 PRINTS PR00092 Tyrosinase copper-binding domain signature 245 250 8.4E-9 T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 PRINTS PR00092 Tyrosinase copper-binding domain signature 216 233 8.4E-9 T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 ProSitePatterns PS00498 Tyrosinase and hemocyanins CuB-binding region signature. 452 463 - T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 PANTHER PTHR11474 199 343 3.9E-22 T 22-04-2016 NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 PANTHER PTHR11474 439 505 3.9E-22 T 22-04-2016 NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 PANTHER PTHR11474 369 406 3.9E-22 T 22-04-2016 NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 ProSitePatterns PS00497 Tyrosinase CuA-binding region signature. 216 233 - T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 SUPERFAMILY SSF48056 341 409 2.22E-49 T 22-04-2016 IPR008922 Uncharacterised domain, di-copper centre NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 SUPERFAMILY SSF48056 440 505 2.22E-49 T 22-04-2016 IPR008922 Uncharacterised domain, di-copper centre NHAM_RS05205 ec8c0ed2b3d1cacdcffc96a91a337a81 666 SUPERFAMILY SSF48056 141 314 2.22E-49 T 22-04-2016 IPR008922 Uncharacterised domain, di-copper centre NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 3.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PANTHER PTHR24322:SF356 159 190 5.6E-52 T 22-04-2016 NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PANTHER PTHR24322:SF356 10 143 5.6E-52 T 22-04-2016 NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 4.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 4.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PANTHER PTHR24322 159 190 5.6E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 PANTHER PTHR24322 10 143 5.6E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 Pfam PF00106 short chain dehydrogenase 7 200 1.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 Gene3D G3DSA:3.40.50.720 1 248 1.5E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS03390 522e338299639bfd86bdff149d5bd5c7 253 SUPERFAMILY SSF51735 4 246 3.52E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS16095 3fb8d8f7bc709ee2c565878f0720d46f 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 76 110 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site NHAM_RS16095 3fb8d8f7bc709ee2c565878f0720d46f 170 Pfam PF12802 MarR family 43 101 7.0E-13 T 22-04-2016 NHAM_RS16095 3fb8d8f7bc709ee2c565878f0720d46f 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 7.2E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS16095 3fb8d8f7bc709ee2c565878f0720d46f 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 7.2E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS16095 3fb8d8f7bc709ee2c565878f0720d46f 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 7.2E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS16095 3fb8d8f7bc709ee2c565878f0720d46f 170 Gene3D G3DSA:1.10.10.10 13 150 7.6E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS16095 3fb8d8f7bc709ee2c565878f0720d46f 170 SUPERFAMILY SSF46785 16 151 2.81E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS16095 3fb8d8f7bc709ee2c565878f0720d46f 170 SMART SM00347 37 137 6.3E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS16095 3fb8d8f7bc709ee2c565878f0720d46f 170 PANTHER PTHR33164 18 161 4.4E-15 T 22-04-2016 NHAM_RS12450 19020ca799c2bdf1ec7b21daceeb7e76 146 Pfam PF06170 Protein of unknown function (DUF983) 46 130 6.1E-32 T 22-04-2016 IPR009325 Protein of unknown function DUF983 NHAM_RS10790 82b2b492fb075669a9ba4fabec268d57 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 33.218 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10790 82b2b492fb075669a9ba4fabec268d57 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.4E-31 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10790 82b2b492fb075669a9ba4fabec268d57 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.4E-31 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10790 82b2b492fb075669a9ba4fabec268d57 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.4E-31 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10790 82b2b492fb075669a9ba4fabec268d57 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.4E-31 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10790 82b2b492fb075669a9ba4fabec268d57 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.4E-31 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10790 82b2b492fb075669a9ba4fabec268d57 140 Pfam PF00334 Nucleoside diphosphate kinase 4 138 2.9E-50 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10790 82b2b492fb075669a9ba4fabec268d57 140 SUPERFAMILY SSF54919 1 139 7.07E-54 T 22-04-2016 NHAM_RS10790 82b2b492fb075669a9ba4fabec268d57 140 Gene3D G3DSA:3.30.70.141 1 139 3.5E-52 T 22-04-2016 NHAM_RS10790 82b2b492fb075669a9ba4fabec268d57 140 PANTHER PTHR11349 1 139 3.3E-63 T 22-04-2016 NHAM_RS10790 82b2b492fb075669a9ba4fabec268d57 140 SMART SM00562 3 140 1.4E-75 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS00685 9e62aee04c7d9f01209018063b830871 120 Pfam PF05713 Bacterial mobilisation protein (MobC) 74 109 2.1E-6 T 22-04-2016 IPR008687 Bacterial mobilisation NHAM_RS01905 fa464d3816fb0416fba955288bda9370 286 Gene3D G3DSA:3.40.190.10 2 90 1.7E-27 T 22-04-2016 NHAM_RS01905 fa464d3816fb0416fba955288bda9370 286 Pfam PF00800 Prephenate dehydratase 7 183 5.9E-52 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 NHAM_RS01905 fa464d3816fb0416fba955288bda9370 286 SUPERFAMILY SSF53850 5 186 1.33E-57 T 22-04-2016 NHAM_RS01905 fa464d3816fb0416fba955288bda9370 286 PIRSF PIRSF001500 1 276 7.1E-60 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 NHAM_RS01905 fa464d3816fb0416fba955288bda9370 286 Gene3D G3DSA:3.30.70.260 193 274 7.4E-23 T 22-04-2016 NHAM_RS01905 fa464d3816fb0416fba955288bda9370 286 PANTHER PTHR21022 5 273 1.5E-94 T 22-04-2016 NHAM_RS01905 fa464d3816fb0416fba955288bda9370 286 Gene3D G3DSA:3.40.190.10 91 169 3.0E-25 T 22-04-2016 NHAM_RS01905 fa464d3816fb0416fba955288bda9370 286 SUPERFAMILY SSF55021 176 275 3.61E-24 T 22-04-2016 NHAM_RS04475 0659ef9bb506f752513350f63ff39705 320 PANTHER PTHR23406:SF1 79 285 1.1E-17 T 22-04-2016 NHAM_RS04475 0659ef9bb506f752513350f63ff39705 320 Gene3D G3DSA:3.40.50.10750 124 281 1.7E-48 T 22-04-2016 NHAM_RS04475 0659ef9bb506f752513350f63ff39705 320 SUPERFAMILY SSF53659 14 309 1.27E-64 T 22-04-2016 NHAM_RS04475 0659ef9bb506f752513350f63ff39705 320 PIRSF PIRSF000428 12 312 1.6E-81 T 22-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 NHAM_RS04475 0659ef9bb506f752513350f63ff39705 320 Pfam PF01515 Phosphate acetyl/butaryl transferase 89 305 8.8E-43 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 NHAM_RS04475 0659ef9bb506f752513350f63ff39705 320 PANTHER PTHR23406 79 285 1.1E-17 T 22-04-2016 NHAM_RS18870 45f4f1e1a05a6003406e46a6a62c6f62 345 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 260 2.5E-27 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NHAM_RS18870 45f4f1e1a05a6003406e46a6a62c6f62 345 SUPERFAMILY SSF53850 42 261 4.2E-41 T 22-04-2016 NHAM_RS18870 45f4f1e1a05a6003406e46a6a62c6f62 345 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 NHAM_RS18870 45f4f1e1a05a6003406e46a6a62c6f62 345 Gene3D G3DSA:3.40.190.10 149 209 1.5E-6 T 22-04-2016 NHAM_RS18870 45f4f1e1a05a6003406e46a6a62c6f62 345 Gene3D G3DSA:3.40.190.10 37 148 1.6E-21 T 22-04-2016 NHAM_RS18870 45f4f1e1a05a6003406e46a6a62c6f62 345 PANTHER PTHR30085 14 314 1.8E-139 T 22-04-2016 NHAM_RS18870 45f4f1e1a05a6003406e46a6a62c6f62 345 SMART SM00062 41 270 1.5E-47 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NHAM_RS18870 45f4f1e1a05a6003406e46a6a62c6f62 345 PANTHER PTHR30085:SF5 14 314 1.8E-139 T 22-04-2016 NHAM_RS09770 b16ba446e5bd5dd5db10dabd3568ccdc 526 SUPERFAMILY SSF56112 4 309 1.45E-21 T 22-04-2016 IPR011009 Protein kinase-like domain NHAM_RS09770 b16ba446e5bd5dd5db10dabd3568ccdc 526 SUPERFAMILY SSF52540 337 504 3.14E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09770 b16ba446e5bd5dd5db10dabd3568ccdc 526 Gene3D G3DSA:3.40.50.300 340 473 1.5E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09770 b16ba446e5bd5dd5db10dabd3568ccdc 526 PANTHER PTHR12083:SF8 11 379 1.3E-103 T 22-04-2016 NHAM_RS09770 b16ba446e5bd5dd5db10dabd3568ccdc 526 PANTHER PTHR12083:SF8 404 484 1.3E-103 T 22-04-2016 NHAM_RS09770 b16ba446e5bd5dd5db10dabd3568ccdc 526 Pfam PF01636 Phosphotransferase enzyme family 114 277 4.0E-8 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase NHAM_RS09770 b16ba446e5bd5dd5db10dabd3568ccdc 526 Gene3D G3DSA:3.90.1200.10 134 278 2.0E-5 T 22-04-2016 NHAM_RS09770 b16ba446e5bd5dd5db10dabd3568ccdc 526 Pfam PF13671 AAA domain 342 470 9.1E-18 T 22-04-2016 NHAM_RS09770 b16ba446e5bd5dd5db10dabd3568ccdc 526 PANTHER PTHR12083 11 379 1.3E-103 T 22-04-2016 NHAM_RS09770 b16ba446e5bd5dd5db10dabd3568ccdc 526 PANTHER PTHR12083 404 484 1.3E-103 T 22-04-2016 NHAM_RS06355 f3ed0e97ff18bbfb947223dfeef9ca5d 235 Gene3D G3DSA:3.40.1080.10 2 216 1.3E-99 T 22-04-2016 NHAM_RS06355 f3ed0e97ff18bbfb947223dfeef9ca5d 235 Pfam PF01144 Coenzyme A transferase 8 216 2.8E-80 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NHAM_RS06355 f3ed0e97ff18bbfb947223dfeef9ca5d 235 PANTHER PTHR13707 1 230 1.3E-135 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NHAM_RS06355 f3ed0e97ff18bbfb947223dfeef9ca5d 235 SMART SM00882 5 217 7.6E-90 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NHAM_RS06355 f3ed0e97ff18bbfb947223dfeef9ca5d 235 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 218 2.3E-82 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 NHAM_RS06355 f3ed0e97ff18bbfb947223dfeef9ca5d 235 SUPERFAMILY SSF100950 2 227 1.91E-87 T 22-04-2016 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 PRINTS PR00315 GTP-binding elongation factor signature 120 131 5.7E-19 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 PRINTS PR00315 GTP-binding elongation factor signature 104 114 5.7E-19 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 PRINTS PR00315 GTP-binding elongation factor signature 84 92 5.7E-19 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 PRINTS PR00315 GTP-binding elongation factor signature 157 166 5.7E-19 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 PRINTS PR00315 GTP-binding elongation factor signature 26 39 5.7E-19 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 457 628 32.701 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 Pfam PF01583 Adenylylsulphate kinase 459 610 4.8E-57 T 22-04-2016 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 Gene3D G3DSA:3.40.50.300 21 229 9.1E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 SUPERFAMILY SSF50447 238 322 1.62E-15 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 Gene3D G3DSA:3.40.50.300 440 631 2.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 PANTHER PTHR23115:SF170 7 334 3.9E-74 T 22-04-2016 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 Pfam PF00009 Elongation factor Tu GTP binding domain 25 223 9.7E-46 T 22-04-2016 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 SUPERFAMILY SSF52540 22 248 3.97E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 PANTHER PTHR23115 7 334 3.9E-74 T 22-04-2016 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 Gene3D G3DSA:2.40.30.10 238 335 3.4E-19 T 22-04-2016 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 SMART SM00382 458 566 3.7E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 SMART SM00382 23 260 7.9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 26 413 4.0E-102 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 445 621 6.4E-60 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 77 92 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 SUPERFAMILY SSF52540 457 626 1.42E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 Gene3D G3DSA:2.40.30.10 336 429 3.5E-6 T 22-04-2016 NHAM_RS18285 8b09430cdceb9ea5882201fb24c30a66 641 SUPERFAMILY SSF50465 327 426 4.17E-21 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 76 665 4.7E-160 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 SUPERFAMILY SSF82771 83 166 1.96E-20 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 PANTHER PTHR30562:SF1 540 685 4.9E-259 T 22-04-2016 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 PANTHER PTHR30562:SF1 47 523 4.9E-259 T 22-04-2016 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 Gene3D G3DSA:3.40.1440.10 83 160 1.2E-8 T 22-04-2016 IPR027299 GIY-YIG domain NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 Hamap MF_00203 UvrABC system protein C [uvrC]. 70 684 27.207 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 Pfam PF02151 UvrB/uvrC motif 272 304 3.8E-7 T 22-04-2016 IPR001943 UVR domain GO:0005515 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 Pfam PF01541 GIY-YIG catalytic domain 85 157 3.4E-9 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 448 619 2.5E-51 T 22-04-2016 IPR001162 UvrC family homology region NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 SUPERFAMILY SSF46600 257 309 4.97E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 SMART SM00465 83 164 3.3E-16 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 SUPERFAMILY SSF47781 598 686 9.85E-22 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 Gene3D G3DSA:1.10.150.20 635 687 2.8E-21 T 22-04-2016 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 Pfam PF14520 Helix-hairpin-helix domain 635 682 1.2E-10 T 22-04-2016 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 Gene3D G3DSA:4.10.860.10 254 309 1.9E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 PANTHER PTHR30562 540 685 4.9E-259 T 22-04-2016 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 PANTHER PTHR30562 47 523 4.9E-259 T 22-04-2016 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 SMART SM00278 633 652 31.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NHAM_RS16135 4d3d70c71ad54debcca4ee61cb9ddefd 690 SMART SM00278 665 684 2.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NHAM_RS07545 545053ffa82b38de9c42f59aaffeed8b 343 Pfam PF04055 Radical SAM superfamily 29 191 2.1E-25 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NHAM_RS07545 545053ffa82b38de9c42f59aaffeed8b 343 Pfam PF13353 4Fe-4S single cluster domain 32 136 1.9E-10 T 22-04-2016 NHAM_RS07545 545053ffa82b38de9c42f59aaffeed8b 343 Pfam PF06463 Molybdenum Cofactor Synthesis C 198 323 8.0E-38 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS07545 545053ffa82b38de9c42f59aaffeed8b 343 PANTHER PTHR22960 13 295 7.5E-115 T 22-04-2016 NHAM_RS07545 545053ffa82b38de9c42f59aaffeed8b 343 SUPERFAMILY SSF102114 17 289 3.79E-72 T 22-04-2016 NHAM_RS07545 545053ffa82b38de9c42f59aaffeed8b 343 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 16 343 4.6E-111 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS07545 545053ffa82b38de9c42f59aaffeed8b 343 Gene3D G3DSA:3.20.20.70 16 312 1.1E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS07545 545053ffa82b38de9c42f59aaffeed8b 343 SMART SM00729 25 226 2.0E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NHAM_RS07545 545053ffa82b38de9c42f59aaffeed8b 343 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 16 343 39.043 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS07545 545053ffa82b38de9c42f59aaffeed8b 343 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 31 42 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS14390 e81d140c65e7674414201831c5bb47a0 625 SMART SM00382 399 595 0.0043 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS14390 e81d140c65e7674414201831c5bb47a0 625 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 302 4.1E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NHAM_RS14390 e81d140c65e7674414201831c5bb47a0 625 SUPERFAMILY SSF52540 373 616 1.63E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14390 e81d140c65e7674414201831c5bb47a0 625 ProSitePatterns PS00211 ABC transporters family signature. 520 534 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS14390 e81d140c65e7674414201831c5bb47a0 625 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 595 617 1.7E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NHAM_RS14390 e81d140c65e7674414201831c5bb47a0 625 PANTHER PTHR24220 376 617 1.4E-87 T 22-04-2016 NHAM_RS14390 e81d140c65e7674414201831c5bb47a0 625 Pfam PF00005 ABC transporter 392 547 6.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS14390 e81d140c65e7674414201831c5bb47a0 625 PANTHER PTHR24220:SF358 376 617 1.4E-87 T 22-04-2016 NHAM_RS14390 e81d140c65e7674414201831c5bb47a0 625 Gene3D G3DSA:3.40.50.300 372 615 1.8E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18950 3ed3a02423e6b0f6292cde0c8a011b4e 310 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 3 304 34.223 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NHAM_RS18950 3ed3a02423e6b0f6292cde0c8a011b4e 310 Pfam PF00551 Formyl transferase 5 181 1.4E-37 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NHAM_RS18950 3ed3a02423e6b0f6292cde0c8a011b4e 310 Gene3D G3DSA:3.10.25.10 208 309 2.1E-27 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NHAM_RS18950 3ed3a02423e6b0f6292cde0c8a011b4e 310 PANTHER PTHR11138 2 300 3.9E-103 T 22-04-2016 NHAM_RS18950 3ed3a02423e6b0f6292cde0c8a011b4e 310 Pfam PF02911 Formyl transferase, C-terminal domain 205 301 1.5E-24 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NHAM_RS18950 3ed3a02423e6b0f6292cde0c8a011b4e 310 SUPERFAMILY SSF50486 206 309 2.94E-27 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 NHAM_RS18950 3ed3a02423e6b0f6292cde0c8a011b4e 310 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 301 1.8E-80 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NHAM_RS18950 3ed3a02423e6b0f6292cde0c8a011b4e 310 SUPERFAMILY SSF53328 3 208 7.06E-64 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NHAM_RS18950 3ed3a02423e6b0f6292cde0c8a011b4e 310 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NHAM_RS18950 3ed3a02423e6b0f6292cde0c8a011b4e 310 Gene3D G3DSA:3.40.50.170 2 206 4.0E-69 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NHAM_RS00305 19330fb0aa6e23a4ab4e8e6d9f25916c 278 PANTHER PTHR10314 1 52 1.7E-24 T 22-04-2016 NHAM_RS00305 19330fb0aa6e23a4ab4e8e6d9f25916c 278 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 258 3.2E-78 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS00305 19330fb0aa6e23a4ab4e8e6d9f25916c 278 PANTHER PTHR10314:SF4 75 131 1.7E-24 T 22-04-2016 NHAM_RS00305 19330fb0aa6e23a4ab4e8e6d9f25916c 278 Pfam PF00290 Tryptophan synthase alpha chain 9 263 5.9E-92 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS00305 19330fb0aa6e23a4ab4e8e6d9f25916c 278 PANTHER PTHR10314 75 131 1.7E-24 T 22-04-2016 NHAM_RS00305 19330fb0aa6e23a4ab4e8e6d9f25916c 278 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 49 62 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS00305 19330fb0aa6e23a4ab4e8e6d9f25916c 278 PANTHER PTHR10314:SF4 1 52 1.7E-24 T 22-04-2016 NHAM_RS00305 19330fb0aa6e23a4ab4e8e6d9f25916c 278 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 15 269 35.39 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS00305 19330fb0aa6e23a4ab4e8e6d9f25916c 278 SUPERFAMILY SSF51366 3 263 2.64E-88 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NHAM_RS00305 19330fb0aa6e23a4ab4e8e6d9f25916c 278 Gene3D G3DSA:3.20.20.70 4 272 1.0E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS00265 aea3bdcdbe4a450f5d21f13ddd384ecb 507 Pfam PF01636 Phosphotransferase enzyme family 178 425 3.6E-24 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase NHAM_RS00265 aea3bdcdbe4a450f5d21f13ddd384ecb 507 SUPERFAMILY SSF56112 159 496 2.19E-49 T 22-04-2016 IPR011009 Protein kinase-like domain NHAM_RS00265 aea3bdcdbe4a450f5d21f13ddd384ecb 507 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 132 2.1E-28 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 NHAM_RS00265 aea3bdcdbe4a450f5d21f13ddd384ecb 507 Gene3D G3DSA:3.90.1200.10 268 504 1.4E-62 T 22-04-2016 NHAM_RS00265 aea3bdcdbe4a450f5d21f13ddd384ecb 507 Gene3D G3DSA:3.30.200.20 156 261 9.1E-28 T 22-04-2016 NHAM_RS00265 aea3bdcdbe4a450f5d21f13ddd384ecb 507 SUPERFAMILY SSF52540 20 133 4.77E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00265 aea3bdcdbe4a450f5d21f13ddd384ecb 507 PANTHER PTHR33540 10 211 9.5E-43 T 22-04-2016 NHAM_RS00265 aea3bdcdbe4a450f5d21f13ddd384ecb 507 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 12 133 2.1E-24 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 NHAM_RS00265 aea3bdcdbe4a450f5d21f13ddd384ecb 507 PIRSF PIRSF036599 1 507 8.1E-219 T 22-04-2016 IPR012180 Predicted bifunctional ATPase/phosphotransferase NHAM_RS00265 aea3bdcdbe4a450f5d21f13ddd384ecb 507 Gene3D G3DSA:3.40.50.300 9 155 2.9E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16825 5c9f933e630d6b98da279908e5dff110 358 Gene3D G3DSA:2.60.40.420 181 322 2.4E-37 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS16825 5c9f933e630d6b98da279908e5dff110 358 PANTHER PTHR11709:SF33 1 283 7.0E-65 T 22-04-2016 NHAM_RS16825 5c9f933e630d6b98da279908e5dff110 358 PANTHER PTHR11709 1 283 7.0E-65 T 22-04-2016 NHAM_RS16825 5c9f933e630d6b98da279908e5dff110 358 Gene3D G3DSA:2.60.40.420 31 180 1.8E-38 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS16825 5c9f933e630d6b98da279908e5dff110 358 Pfam PF07731 Multicopper oxidase 202 300 1.5E-20 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 NHAM_RS16825 5c9f933e630d6b98da279908e5dff110 358 SUPERFAMILY SSF49503 32 191 3.47E-41 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS16825 5c9f933e630d6b98da279908e5dff110 358 Pfam PF07732 Multicopper oxidase 54 164 1.2E-34 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 NHAM_RS16825 5c9f933e630d6b98da279908e5dff110 358 SUPERFAMILY SSF49503 165 299 1.15E-33 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS04900 abfa999d1f39327442b681f91daffdb2 343 Gene3D G3DSA:3.40.50.1980 32 163 4.0E-10 T 22-04-2016 NHAM_RS04900 abfa999d1f39327442b681f91daffdb2 343 SUPERFAMILY SSF53807 35 340 2.59E-47 T 22-04-2016 NHAM_RS04900 abfa999d1f39327442b681f91daffdb2 343 PANTHER PTHR30535 32 340 5.9E-47 T 22-04-2016 NHAM_RS04900 abfa999d1f39327442b681f91daffdb2 343 Pfam PF01497 Periplasmic binding protein 98 280 5.2E-14 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 NHAM_RS04900 abfa999d1f39327442b681f91daffdb2 343 Gene3D G3DSA:3.40.50.1980 165 318 1.8E-19 T 22-04-2016 NHAM_RS04900 abfa999d1f39327442b681f91daffdb2 343 PANTHER PTHR30535:SF13 32 340 5.9E-47 T 22-04-2016 NHAM_RS09885 2b6903a8a2a629b255417e3df49907e6 354 PANTHER PTHR33055:SF2 8 353 1.9E-204 T 22-04-2016 NHAM_RS09885 2b6903a8a2a629b255417e3df49907e6 354 Pfam PF01548 Transposase 12 149 4.4E-16 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS09885 2b6903a8a2a629b255417e3df49907e6 354 Pfam PF02371 Transposase IS116/IS110/IS902 family 217 297 1.2E-22 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS09885 2b6903a8a2a629b255417e3df49907e6 354 PANTHER PTHR33055 8 353 1.9E-204 T 22-04-2016 NHAM_RS16475 a74401373775b178febfbe4a67db2631 336 PANTHER PTHR12001:SF47 8 336 1.4E-111 T 22-04-2016 NHAM_RS16475 a74401373775b178febfbe4a67db2631 336 PANTHER PTHR12001 8 336 1.4E-111 T 22-04-2016 IPR017446 Polyprenyl synthetase-related NHAM_RS16475 a74401373775b178febfbe4a67db2631 336 Pfam PF00348 Polyprenyl synthetase 44 284 1.8E-66 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NHAM_RS16475 a74401373775b178febfbe4a67db2631 336 Gene3D G3DSA:1.10.600.10 16 335 1.5E-96 T 22-04-2016 IPR008949 Isoprenoid synthase domain NHAM_RS16475 a74401373775b178febfbe4a67db2631 336 SUPERFAMILY SSF48576 12 335 3.04E-95 T 22-04-2016 IPR008949 Isoprenoid synthase domain NHAM_RS16475 a74401373775b178febfbe4a67db2631 336 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NHAM_RS16475 a74401373775b178febfbe4a67db2631 336 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 93 107 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 SUPERFAMILY SSF49313 391 478 1.55E-5 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 SUPERFAMILY SSF81296 749 833 5.02E-14 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 SUPERFAMILY SSF49313 121 206 2.67E-7 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 SUPERFAMILY SSF81296 663 747 2.2E-17 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 Pfam PF01833 IPT/TIG domain 922 1003 1.9E-10 T 22-04-2016 IPR002909 IPT domain GO:0005515 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 Pfam PF01833 IPT/TIG domain 664 745 2.8E-12 T 22-04-2016 IPR002909 IPT domain GO:0005515 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 Pfam PF01833 IPT/TIG domain 836 917 4.7E-12 T 22-04-2016 IPR002909 IPT domain GO:0005515 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 Pfam PF01833 IPT/TIG domain 750 831 9.3E-9 T 22-04-2016 IPR002909 IPT domain GO:0005515 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 PANTHER PTHR37494 100 672 2.5E-13 T 22-04-2016 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 SUPERFAMILY SSF81296 835 919 1.1E-16 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 Gene3D G3DSA:2.60.40.10 663 746 8.9E-19 T 22-04-2016 IPR013783 Immunoglobulin-like fold NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 Gene3D G3DSA:2.60.40.10 920 1003 2.3E-17 T 22-04-2016 IPR013783 Immunoglobulin-like fold NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 Gene3D G3DSA:2.60.40.10 834 917 7.1E-19 T 22-04-2016 IPR013783 Immunoglobulin-like fold NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 Gene3D G3DSA:2.60.40.10 748 831 7.2E-16 T 22-04-2016 IPR013783 Immunoglobulin-like fold NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 SUPERFAMILY SSF49313 571 658 7.06E-7 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 SMART SM00429 835 918 2.2E-5 T 22-04-2016 IPR002909 IPT domain GO:0005515 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 SMART SM00429 921 1004 8.1E-4 T 22-04-2016 IPR002909 IPT domain GO:0005515 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 SMART SM00429 663 746 2.4E-6 T 22-04-2016 IPR002909 IPT domain GO:0005515 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 SMART SM00429 749 832 0.0022 T 22-04-2016 IPR002909 IPT domain GO:0005515 NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 SUPERFAMILY SSF81296 921 1004 1.98E-15 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 Pfam PF05345 Putative Ig domain 600 640 3.2E-8 T 22-04-2016 IPR008009 Putative Ig NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 Pfam PF05345 Putative Ig domain 153 190 3.7E-6 T 22-04-2016 IPR008009 Putative Ig NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 Pfam PF05345 Putative Ig domain 421 460 1.1E-4 T 22-04-2016 IPR008009 Putative Ig NHAM_RS23895 760ce92d76f3277aa05a86c652398897 1092 Pfam PF05345 Putative Ig domain 238 277 1.6E-5 T 22-04-2016 IPR008009 Putative Ig NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 SMART SM00388 237 303 1.2E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 Gene3D G3DSA:3.30.565.10 308 469 8.3E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 Gene3D G3DSA:1.10.287.130 227 299 4.2E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 PANTHER PTHR24423 177 479 6.3E-57 T 22-04-2016 NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 SMART SM00304 183 236 1.2E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 SUPERFAMILY SSF47384 220 304 2.75E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 1.4E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 412 1.4E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 Pfam PF00672 HAMP domain 165 232 1.8E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 SMART SM00387 347 470 9.6E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 467 1.4E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 SUPERFAMILY SSF55874 292 468 7.6E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07395 3850785208a827bb13aec70cdc7415c0 486 SUPERFAMILY SSF158472 183 234 3.53E-8 T 22-04-2016 NHAM_RS11890 7ea6edd4f89d908964c6e3b43210ad8e 174 SUPERFAMILY SSF52833 23 174 3.26E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS11890 7ea6edd4f89d908964c6e3b43210ad8e 174 PANTHER PTHR10681 20 170 4.5E-44 T 22-04-2016 NHAM_RS11890 7ea6edd4f89d908964c6e3b43210ad8e 174 Pfam PF00578 AhpC/TSA family 26 152 7.4E-32 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NHAM_RS11890 7ea6edd4f89d908964c6e3b43210ad8e 174 Gene3D G3DSA:3.40.30.10 18 174 3.3E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS08055 40b0b12f976adeda67d559f7ff0de255 230 SUPERFAMILY SSF48452 77 210 8.54E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS08055 40b0b12f976adeda67d559f7ff0de255 230 Pfam PF13432 Tetratricopeptide repeat 154 207 8.2E-5 T 22-04-2016 NHAM_RS08055 40b0b12f976adeda67d559f7ff0de255 230 Gene3D G3DSA:1.25.40.10 78 211 4.6E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS11740 375ed3d46562725af0b8f2c70fe63f21 407 Pfam PF13406 Transglycosylase SLT domain 38 327 4.9E-84 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 NHAM_RS11740 375ed3d46562725af0b8f2c70fe63f21 407 PANTHER PTHR30163 5 406 6.3E-154 T 22-04-2016 IPR011757 Lytic transglycosylase MltB NHAM_RS11740 375ed3d46562725af0b8f2c70fe63f21 407 Gene3D G3DSA:1.10.101.10 349 404 2.8E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS11740 375ed3d46562725af0b8f2c70fe63f21 407 Gene3D G3DSA:1.10.530.10 224 332 4.3E-45 T 22-04-2016 NHAM_RS11740 375ed3d46562725af0b8f2c70fe63f21 407 Gene3D G3DSA:1.10.530.10 81 138 4.3E-45 T 22-04-2016 NHAM_RS11740 375ed3d46562725af0b8f2c70fe63f21 407 SUPERFAMILY SSF53955 23 333 6.33E-84 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS11740 375ed3d46562725af0b8f2c70fe63f21 407 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 38 330 2.1E-101 T 22-04-2016 IPR011970 Lytic murein transglycosylase NHAM_RS11740 375ed3d46562725af0b8f2c70fe63f21 407 PANTHER PTHR30163:SF2 5 406 6.3E-154 T 22-04-2016 NHAM_RS11740 375ed3d46562725af0b8f2c70fe63f21 407 SUPERFAMILY SSF47090 334 404 5.81E-17 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS11740 375ed3d46562725af0b8f2c70fe63f21 407 Pfam PF01471 Putative peptidoglycan binding domain 349 403 1.4E-13 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS08970 186254fab7e0df170c016ded6bee91a9 266 PANTHER PTHR22748 1 261 3.3E-143 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 NHAM_RS08970 186254fab7e0df170c016ded6bee91a9 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 251 1.1E-29 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NHAM_RS08970 186254fab7e0df170c016ded6bee91a9 266 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 NHAM_RS08970 186254fab7e0df170c016ded6bee91a9 266 PANTHER PTHR22748:SF9 1 261 3.3E-143 T 22-04-2016 NHAM_RS08970 186254fab7e0df170c016ded6bee91a9 266 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 215 226 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 NHAM_RS08970 186254fab7e0df170c016ded6bee91a9 266 SUPERFAMILY SSF56219 1 260 6.15E-84 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NHAM_RS08970 186254fab7e0df170c016ded6bee91a9 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 257 7.3E-73 T 22-04-2016 NHAM_RS08970 186254fab7e0df170c016ded6bee91a9 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 259 1.8E-70 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 NHAM_RS08970 186254fab7e0df170c016ded6bee91a9 266 Gene3D G3DSA:3.60.10.10 1 259 1.9E-79 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NHAM_RS15245 db2196f821f86a90e81b79aec5b95263 331 Pfam PF13557 Putative MetA-pathway of phenol degradation 88 317 4.5E-45 T 22-04-2016 IPR025737 MetA-pathway of phenol degradation, putative NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 SMART SM00662 31 238 2.9E-91 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 SUPERFAMILY SSF56553 61 182 1.29E-40 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 260 314 6.1E-25 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 37 232 1.9E-21 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 11 323 35.199 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 SUPERFAMILY SSF47789 259 332 8.37E-27 T 22-04-2016 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 263 332 8.0E-35 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 32 323 4.3E-114 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 Gene3D G3DSA:3.30.1360.10 29 74 3.3E-8 T 22-04-2016 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 Gene3D G3DSA:1.10.150.20 254 334 5.3E-36 T 22-04-2016 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 Gene3D G3DSA:2.170.120.12 75 181 2.4E-43 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 SUPERFAMILY SSF55257 183 235 4.45E-29 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 SUPERFAMILY SSF55257 11 61 4.45E-29 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 70 163 9.0E-22 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 PANTHER PTHR32108:SF0 6 336 1.5E-135 T 22-04-2016 NHAM_RS08030 5954f71f595528840ab990f630dbdb16 343 PANTHER PTHR32108 6 336 1.5E-135 T 22-04-2016 NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 SMART SM00100 27 142 2.3E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 ProSitePatterns PS00042 Crp-type HTH domain signature. 191 214 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 PANTHER PTHR24567:SF28 17 241 8.5E-50 T 22-04-2016 NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 Pfam PF13545 Crp-like helix-turn-helix domain 162 238 1.4E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 SMART SM00419 183 232 5.4E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 PANTHER PTHR24567 17 241 8.5E-50 T 22-04-2016 NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 Gene3D G3DSA:2.60.120.10 23 163 1.0E-17 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 SUPERFAMILY SSF51206 21 157 1.27E-24 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 205 220 6.4E-9 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 189 205 6.4E-9 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 Gene3D G3DSA:1.10.10.10 164 240 3.0E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 Pfam PF00027 Cyclic nucleotide-binding domain 47 130 6.9E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS06430 ee7ad62d8f4fdaf8e3948060fb057507 241 SUPERFAMILY SSF46785 159 240 1.94E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04660 54f46d9e17ae578c3c1fe9dc68c2bf7e 411 Pfam PF02687 FtsX-like permease family 291 404 6.4E-23 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NHAM_RS04660 54f46d9e17ae578c3c1fe9dc68c2bf7e 411 PANTHER PTHR30572 1 411 3.2E-105 T 22-04-2016 NHAM_RS04660 54f46d9e17ae578c3c1fe9dc68c2bf7e 411 PANTHER PTHR30572:SF7 1 411 3.2E-105 T 22-04-2016 NHAM_RS04660 54f46d9e17ae578c3c1fe9dc68c2bf7e 411 Pfam PF12704 MacB-like periplasmic core domain 21 250 9.4E-34 T 22-04-2016 IPR025857 MacB-like periplasmic core domain NHAM_RS09360 557a0e5200b1a28c6c7ab0524c840a81 388 SUPERFAMILY SSF103473 7 380 3.14E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS09360 557a0e5200b1a28c6c7ab0524c840a81 388 Gene3D G3DSA:1.20.1250.20 204 377 8.4E-14 T 22-04-2016 NHAM_RS09360 557a0e5200b1a28c6c7ab0524c840a81 388 Gene3D G3DSA:1.20.1250.20 10 188 2.2E-14 T 22-04-2016 NHAM_RS09360 557a0e5200b1a28c6c7ab0524c840a81 388 Pfam PF07690 Major Facilitator Superfamily 20 230 1.3E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS09360 557a0e5200b1a28c6c7ab0524c840a81 388 PANTHER PTHR23523 2 382 3.5E-30 T 22-04-2016 NHAM_RS13245 2596549eee67144ee3b849a83e837d76 201 Pfam PF01323 DSBA-like thioredoxin domain 2 196 2.7E-36 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 NHAM_RS13245 2596549eee67144ee3b849a83e837d76 201 PANTHER PTHR13887 1 198 9.1E-83 T 22-04-2016 NHAM_RS13245 2596549eee67144ee3b849a83e837d76 201 SUPERFAMILY SSF52833 2 198 1.02E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS13245 2596549eee67144ee3b849a83e837d76 201 PIRSF PIRSF006386 1 201 1.4E-62 T 22-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa NHAM_RS13245 2596549eee67144ee3b849a83e837d76 201 Gene3D G3DSA:3.40.30.10 2 196 9.0E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS13245 2596549eee67144ee3b849a83e837d76 201 PANTHER PTHR13887:SF22 1 198 9.1E-83 T 22-04-2016 NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.6E-14 T 22-04-2016 NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 SUPERFAMILY SSF50249 1 63 3.6E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 Gene3D G3DSA:1.10.150.20 68 140 5.3E-27 T 22-04-2016 NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 Pfam PF07499 RuvA, C-terminal domain 159 203 4.4E-10 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 Gene3D G3DSA:1.10.8.10 157 204 1.4E-10 T 22-04-2016 NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 Gene3D G3DSA:2.40.50.140 1 65 1.2E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 201 1.2E-39 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 Pfam PF01330 RuvA N terminal domain 1 62 3.4E-18 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 28.892 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 SUPERFAMILY SSF47781 65 134 1.06E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 SMART SM00278 73 92 110.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 SMART SM00278 108 127 16.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 SUPERFAMILY SSF46929 158 204 2.62E-8 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 NHAM_RS18075 43fe585da6722d4be11419ee1b3680c2 205 PANTHER PTHR33796 2 205 6.5E-71 T 22-04-2016 NHAM_RS19455 9666e528e2372564e7739cddabf832c8 133 PANTHER PTHR33678:SF3 22 117 5.8E-22 T 22-04-2016 NHAM_RS19455 9666e528e2372564e7739cddabf832c8 133 PANTHER PTHR33678 22 117 5.8E-22 T 22-04-2016 NHAM_RS19455 9666e528e2372564e7739cddabf832c8 133 Pfam PF03050 Transposase IS66 family 1 72 7.3E-21 T 22-04-2016 IPR004291 Transposase, IS66 NHAM_RS19455 9666e528e2372564e7739cddabf832c8 133 Pfam PF13817 IS66 C-terminal element 79 116 8.0E-16 T 22-04-2016 NHAM_RS09440 0833e11c7ad2b3bd8a616d1a0483c0f5 238 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 10 226 4.9E-60 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 NHAM_RS09440 0833e11c7ad2b3bd8a616d1a0483c0f5 238 PANTHER PTHR11587:SF3 7 233 4.5E-82 T 22-04-2016 NHAM_RS09440 0833e11c7ad2b3bd8a616d1a0483c0f5 238 SUPERFAMILY SSF52402 9 234 7.22E-55 T 22-04-2016 NHAM_RS09440 0833e11c7ad2b3bd8a616d1a0483c0f5 238 Gene3D G3DSA:3.40.50.620 9 235 4.6E-76 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS09440 0833e11c7ad2b3bd8a616d1a0483c0f5 238 PIRSF PIRSF006293 6 237 1.3E-67 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 NHAM_RS09440 0833e11c7ad2b3bd8a616d1a0483c0f5 238 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 8 238 50.525 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 NHAM_RS09440 0833e11c7ad2b3bd8a616d1a0483c0f5 238 Pfam PF06508 Queuosine biosynthesis protein QueC 10 233 4.9E-74 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 NHAM_RS09440 0833e11c7ad2b3bd8a616d1a0483c0f5 238 PANTHER PTHR11587 7 233 4.5E-82 T 22-04-2016 NHAM_RS05080 2205697a0c28b91074f533058e0af546 800 ProSitePatterns PS00820 Glucoamylase active site region signature. 431 441 - T 22-04-2016 IPR000165 Glucoamylase GO:0004339|GO:0005976 KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 NHAM_RS05080 2205697a0c28b91074f533058e0af546 800 SUPERFAMILY SSF74650 4 274 1.48E-97 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NHAM_RS05080 2205697a0c28b91074f533058e0af546 800 Gene3D G3DSA:1.50.10.10 287 704 2.6E-129 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NHAM_RS05080 2205697a0c28b91074f533058e0af546 800 TIGRFAM TIGR01535 glucan_glucosid: glucan 1,4-alpha-glucosidase 33 703 2.2E-237 T 22-04-2016 IPR006425 Glucoamylase, bacterial KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 NHAM_RS05080 2205697a0c28b91074f533058e0af546 800 SUPERFAMILY SSF48208 251 689 2.14E-85 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NHAM_RS05080 2205697a0c28b91074f533058e0af546 800 Pfam PF09137 Glucodextranase, domain N 7 271 8.1E-97 T 22-04-2016 IPR015220 Glucodextranase N KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 NHAM_RS05080 2205697a0c28b91074f533058e0af546 800 Gene3D G3DSA:2.70.98.10 4 271 1.0E-99 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 NHAM_RS05080 2205697a0c28b91074f533058e0af546 800 Pfam PF00723 Glycosyl hydrolases family 15 376 652 3.9E-18 T 22-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 468 8.1E-204 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 SUPERFAMILY SSF55931 104 468 4.51E-139 T 22-04-2016 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 96 1.4E-29 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 Gene3D G3DSA:3.10.20.70 4 106 2.0E-40 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 Pfam PF00120 Glutamine synthetase, catalytic domain 104 466 1.4E-141 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 SUPERFAMILY SSF54368 3 102 9.55E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 SMART SM01230 103 379 1.3E-146 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 PANTHER PTHR20852:SF15 161 469 1.4E-264 T 22-04-2016 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 PANTHER PTHR20852:SF15 3 139 1.4E-264 T 22-04-2016 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 PANTHER PTHR20852 161 469 1.4E-264 T 22-04-2016 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 PANTHER PTHR20852 3 139 1.4E-264 T 22-04-2016 NHAM_RS11385 8afc656b24ee9334bf9e6ff4e71a5d17 469 Gene3D G3DSA:3.30.590.10 107 455 1.5E-137 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 NHAM_RS18620 6fc0038f7f4fe4d2aad895dda1fa1ec1 101 SUPERFAMILY SSF55248 1 96 2.09E-32 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NHAM_RS18620 6fc0038f7f4fe4d2aad895dda1fa1ec1 101 PANTHER PTHR12599 2 98 1.5E-41 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NHAM_RS18620 6fc0038f7f4fe4d2aad895dda1fa1ec1 101 Gene3D G3DSA:3.30.1360.20 2 97 8.1E-35 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NHAM_RS18620 6fc0038f7f4fe4d2aad895dda1fa1ec1 101 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 94 1.9E-30 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NHAM_RS18620 6fc0038f7f4fe4d2aad895dda1fa1ec1 101 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 24.203 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NHAM_RS09990 7e7a7fe69f29dcbeb07efb618094ac7d 150 SUPERFAMILY SSF81324 26 130 2.62E-13 T 22-04-2016 NHAM_RS09990 7e7a7fe69f29dcbeb07efb618094ac7d 150 Pfam PF07885 Ion channel 54 127 1.3E-8 T 22-04-2016 IPR013099 Potassium channel domain NHAM_RS09990 7e7a7fe69f29dcbeb07efb618094ac7d 150 Gene3D G3DSA:1.10.287.70 43 129 3.9E-10 T 22-04-2016 NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 PANTHER PTHR21499 1 415 2.0E-153 T 22-04-2016 NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 412 6.5E-109 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 SUPERFAMILY SSF55021 342 415 5.11E-19 T 22-04-2016 NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 SUPERFAMILY SSF55021 258 336 7.72E-19 T 22-04-2016 NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 4 412 9.2E-124 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 Gene3D G3DSA:3.40.1160.10 1 258 3.6E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 Pfam PF01842 ACT domain 280 334 2.3E-12 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 PANTHER PTHR21499:SF27 1 415 2.0E-153 T 22-04-2016 NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 Pfam PF13840 ACT domain 350 409 2.2E-11 T 22-04-2016 IPR027795 GATS-like ACT domain NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 Pfam PF00696 Amino acid kinase family 3 232 6.6E-46 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 PIRSF PIRSF000726 60 417 1.2E-122 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 NHAM_RS02445 83a17200b8af116fa62e806a69877c93 417 SUPERFAMILY SSF53633 3 254 8.12E-69 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 SUPERFAMILY SSF56024 110 198 2.2E-5 T 22-04-2016 NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 Pfam PF00176 SNF2 family N-terminal domain 266 453 8.1E-14 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 PANTHER PTHR10799 496 518 1.9E-21 T 22-04-2016 NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 PANTHER PTHR10799 237 448 1.9E-21 T 22-04-2016 NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 PANTHER PTHR10799 598 839 1.9E-21 T 22-04-2016 NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 Gene3D G3DSA:3.40.50.300 239 435 4.6E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 PANTHER PTHR10799:SF688 496 518 1.9E-21 T 22-04-2016 NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 PANTHER PTHR10799:SF688 237 448 1.9E-21 T 22-04-2016 NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 PANTHER PTHR10799:SF688 598 839 1.9E-21 T 22-04-2016 NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 Gene3D G3DSA:3.40.50.300 681 809 6.3E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 SUPERFAMILY SSF52540 373 439 8.62E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 SUPERFAMILY SSF52540 674 860 8.62E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 Pfam PF00271 Helicase conserved C-terminal domain 702 806 3.2E-14 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 Gene3D G3DSA:3.30.870.10 111 197 1.3E-4 T 22-04-2016 NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 SMART SM00490 713 806 5.1E-12 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 SUPERFAMILY SSF52540 192 444 5.11E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 SMART SM00487 238 463 9.1E-18 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS06905 78f0cd77b0ee15e9bb5a42e5ae28f88d 928 Pfam PF13091 PLD-like domain 33 192 4.0E-16 T 22-04-2016 IPR025202 Phospholipase D-like domain NHAM_RS18810 bdcb465512bcaee85efbd3636bb64346 346 Pfam PF00581 Rhodanese-like domain 239 338 4.2E-10 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS18810 bdcb465512bcaee85efbd3636bb64346 346 SMART SM00849 12 171 3.3E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS18810 bdcb465512bcaee85efbd3636bb64346 346 Gene3D G3DSA:3.60.15.10 4 203 1.6E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS18810 bdcb465512bcaee85efbd3636bb64346 346 PANTHER PTHR11935:SF8 1 222 9.7E-73 T 22-04-2016 NHAM_RS18810 bdcb465512bcaee85efbd3636bb64346 346 Pfam PF00753 Metallo-beta-lactamase superfamily 11 171 1.2E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS18810 bdcb465512bcaee85efbd3636bb64346 346 SUPERFAMILY SSF52821 217 345 2.1E-24 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS18810 bdcb465512bcaee85efbd3636bb64346 346 Gene3D G3DSA:3.40.250.10 233 345 2.2E-25 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS18810 bdcb465512bcaee85efbd3636bb64346 346 SUPERFAMILY SSF56281 1 220 1.54E-50 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS18810 bdcb465512bcaee85efbd3636bb64346 346 SMART SM00450 238 342 6.9E-15 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS18810 bdcb465512bcaee85efbd3636bb64346 346 PANTHER PTHR11935 1 222 9.7E-73 T 22-04-2016 NHAM_RS01305 758097d7bd3c221de9db6027e280534f 216 PIRSF PIRSF005413 6 211 2.0E-69 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS01305 758097d7bd3c221de9db6027e280534f 216 PANTHER PTHR21320:SF3 38 212 2.3E-58 T 22-04-2016 NHAM_RS01305 758097d7bd3c221de9db6027e280534f 216 PANTHER PTHR21320 38 212 2.3E-58 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS01305 758097d7bd3c221de9db6027e280534f 216 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 49 194 1.5E-55 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS01305 758097d7bd3c221de9db6027e280534f 216 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 201 43.664 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS01305 758097d7bd3c221de9db6027e280534f 216 Gene3D G3DSA:2.60.370.10 78 208 2.6E-53 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain NHAM_RS01305 758097d7bd3c221de9db6027e280534f 216 SUPERFAMILY SSF110111 78 198 6.28E-49 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain NHAM_RS17745 758097d7bd3c221de9db6027e280534f 216 PIRSF PIRSF005413 6 211 2.0E-69 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS17745 758097d7bd3c221de9db6027e280534f 216 PANTHER PTHR21320:SF3 38 212 2.3E-58 T 22-04-2016 NHAM_RS17745 758097d7bd3c221de9db6027e280534f 216 PANTHER PTHR21320 38 212 2.3E-58 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS17745 758097d7bd3c221de9db6027e280534f 216 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 49 194 1.5E-55 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS17745 758097d7bd3c221de9db6027e280534f 216 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 201 43.664 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS17745 758097d7bd3c221de9db6027e280534f 216 Gene3D G3DSA:2.60.370.10 78 208 2.6E-53 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain NHAM_RS17745 758097d7bd3c221de9db6027e280534f 216 SUPERFAMILY SSF110111 78 198 6.28E-49 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 PANTHER PTHR10422:SF18 1 278 5.3E-188 T 22-04-2016 NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 PANTHER PTHR10422 1 278 5.3E-188 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 Gene3D G3DSA:1.20.210.10 1 278 4.1E-145 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 PRINTS PR01165 Cytochrome c oxidase subunit I signature 41 53 3.5E-78 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 PRINTS PR01165 Cytochrome c oxidase subunit I signature 222 243 3.5E-78 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 PRINTS PR01165 Cytochrome c oxidase subunit I signature 72 90 3.5E-78 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 PRINTS PR01165 Cytochrome c oxidase subunit I signature 101 120 3.5E-78 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 PRINTS PR01165 Cytochrome c oxidase subunit I signature 257 275 3.5E-78 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 PRINTS PR01165 Cytochrome c oxidase subunit I signature 152 173 3.5E-78 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 213 3.5E-78 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 154 208 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 1 277 1.6E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS22190 ba9950fc20198dc5dda122d10d7544d2 278 SUPERFAMILY SSF81442 1 278 6.8E-122 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 SUPERFAMILY SSF82693 557 659 1.67E-16 T 22-04-2016 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 PANTHER PTHR32063 2 1021 0.0 T 22-04-2016 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 SUPERFAMILY SSF82714 184 265 5.49E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 Gene3D G3DSA:3.30.70.1430 41 142 3.7E-23 T 22-04-2016 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 PANTHER PTHR32063:SF21 2 1021 0.0 T 22-04-2016 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 SUPERFAMILY SSF82693 138 183 9.94E-26 T 22-04-2016 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 SUPERFAMILY SSF82693 269 325 9.94E-26 T 22-04-2016 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 6.8E-63 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 6.8E-63 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 6.8E-63 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 6.8E-63 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 6.8E-63 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 6.8E-63 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 6.8E-63 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 6.8E-63 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 6.8E-63 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 Pfam PF00873 AcrB/AcrD/AcrF family 5 1015 4.3E-293 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 SUPERFAMILY SSF82693 41 125 5.41E-20 T 22-04-2016 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 SUPERFAMILY SSF82714 710 793 4.58E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 SUPERFAMILY SSF82866 292 490 8.89E-47 T 22-04-2016 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 Gene3D G3DSA:3.30.2090.10 183 265 1.7E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 Gene3D G3DSA:3.30.2090.10 710 792 3.9E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 SUPERFAMILY SSF82866 795 1020 2.49E-44 T 22-04-2016 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 Gene3D G3DSA:3.30.70.1430 560 659 1.9E-11 T 22-04-2016 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 Gene3D G3DSA:1.10.3850.10 276 492 8.4E-58 T 22-04-2016 NHAM_RS10500 27c31b7dc36b28dd01fd0505af57360d 1032 Gene3D G3DSA:1.10.3850.10 801 1017 9.8E-55 T 22-04-2016 NHAM_RS01805 43e6a5ca63656f459c8256c6d1c685c3 819 Pfam PF02687 FtsX-like permease family 691 808 3.0E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NHAM_RS01805 43e6a5ca63656f459c8256c6d1c685c3 819 Pfam PF02687 FtsX-like permease family 242 364 7.8E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NHAM_RS01805 43e6a5ca63656f459c8256c6d1c685c3 819 Pfam PF12704 MacB-like periplasmic core domain 461 621 1.5E-9 T 22-04-2016 IPR025857 MacB-like periplasmic core domain NHAM_RS01805 43e6a5ca63656f459c8256c6d1c685c3 819 PANTHER PTHR30489:SF6 213 818 6.8E-235 T 22-04-2016 NHAM_RS01805 43e6a5ca63656f459c8256c6d1c685c3 819 PANTHER PTHR30489 213 818 6.8E-235 T 22-04-2016 NHAM_RS01805 43e6a5ca63656f459c8256c6d1c685c3 819 PANTHER PTHR30489 1 183 6.8E-235 T 22-04-2016 NHAM_RS01805 43e6a5ca63656f459c8256c6d1c685c3 819 PANTHER PTHR30489:SF6 1 183 6.8E-235 T 22-04-2016 NHAM_RS05760 3cf276640e6d9cb1743a3c141b508569 240 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 54 204 7.5E-50 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NHAM_RS05760 3cf276640e6d9cb1743a3c141b508569 240 Gene3D G3DSA:3.30.1060.10 39 206 1.4E-66 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NHAM_RS05760 3cf276640e6d9cb1743a3c141b508569 240 PANTHER PTHR10173:SF29 28 228 5.0E-98 T 22-04-2016 NHAM_RS05760 3cf276640e6d9cb1743a3c141b508569 240 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 52 212 34.695 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NHAM_RS05760 3cf276640e6d9cb1743a3c141b508569 240 Pfam PF01625 Peptide methionine sulfoxide reductase 54 206 2.7E-57 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NHAM_RS05760 3cf276640e6d9cb1743a3c141b508569 240 SUPERFAMILY SSF55068 46 217 2.35E-66 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NHAM_RS05760 3cf276640e6d9cb1743a3c141b508569 240 PANTHER PTHR10173 28 228 5.0E-98 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 Gene3D G3DSA:1.25.40.10 57 244 3.8E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 SMART SM00028 383 416 290.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 SMART SM00028 349 382 120.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 SMART SM00028 456 490 84.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 SMART SM00028 281 314 0.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 SMART SM00028 491 524 0.0074 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 SMART SM00028 422 455 0.0049 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 SMART SM00028 315 344 410.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 Gene3D G3DSA:1.25.40.10 273 559 9.7E-52 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 SUPERFAMILY SSF48452 280 408 5.42E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 SUPERFAMILY SSF48452 57 244 1.14E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 PANTHER PTHR23083 48 183 1.4E-46 T 22-04-2016 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 PANTHER PTHR23083 277 540 1.4E-46 T 22-04-2016 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 SUPERFAMILY SSF48452 380 557 4.17E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS16485 e023ef7fe1e38127b420c89e1694eec5 593 Pfam PF13414 TPR repeat 500 539 3.4E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS06875 5f98b2ad6f920eeec10203ee5b34aa7d 136 SUPERFAMILY SSF109635 4 94 7.72E-32 T 22-04-2016 NHAM_RS06875 5f98b2ad6f920eeec10203ee5b34aa7d 136 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 16 125 2.3E-45 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 NHAM_RS06875 5f98b2ad6f920eeec10203ee5b34aa7d 136 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 98 122 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site NHAM_RS06875 5f98b2ad6f920eeec10203ee5b34aa7d 136 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 12 134 28.574 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 NHAM_RS06875 5f98b2ad6f920eeec10203ee5b34aa7d 136 PANTHER PTHR33823 4 131 1.4E-46 T 22-04-2016 NHAM_RS06875 5f98b2ad6f920eeec10203ee5b34aa7d 136 PANTHER PTHR33823:SF2 4 131 1.4E-46 T 22-04-2016 NHAM_RS06875 5f98b2ad6f920eeec10203ee5b34aa7d 136 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 94 128 5.2E-12 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 NHAM_RS06875 5f98b2ad6f920eeec10203ee5b34aa7d 136 SUPERFAMILY SSF57716 95 134 2.42E-9 T 22-04-2016 NHAM_RS02415 5a46a407cbf90379e5aa2a5a9da5ee8c 255 SMART SM00849 13 171 5.6E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS02415 5a46a407cbf90379e5aa2a5a9da5ee8c 255 PIRSF PIRSF005457 1 255 4.0E-93 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 NHAM_RS02415 5a46a407cbf90379e5aa2a5a9da5ee8c 255 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 3 255 40.514 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 NHAM_RS02415 5a46a407cbf90379e5aa2a5a9da5ee8c 255 SUPERFAMILY SSF56281 5 254 1.57E-65 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS02415 5a46a407cbf90379e5aa2a5a9da5ee8c 255 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 172 254 2.4E-25 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 NHAM_RS02415 5a46a407cbf90379e5aa2a5a9da5ee8c 255 PANTHER PTHR11935:SF7 4 254 1.6E-90 T 22-04-2016 NHAM_RS02415 5a46a407cbf90379e5aa2a5a9da5ee8c 255 PANTHER PTHR11935 4 254 1.6E-90 T 22-04-2016 NHAM_RS02415 5a46a407cbf90379e5aa2a5a9da5ee8c 255 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 7 254 6.5E-94 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 NHAM_RS02415 5a46a407cbf90379e5aa2a5a9da5ee8c 255 Gene3D G3DSA:3.60.15.10 6 254 2.9E-79 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS02415 5a46a407cbf90379e5aa2a5a9da5ee8c 255 Pfam PF00753 Metallo-beta-lactamase superfamily 16 171 1.1E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS11495 2bfd8792b5bd1b40691120827f45106a 130 Gene3D G3DSA:3.90.940.10 1 66 3.1E-11 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS11495 2bfd8792b5bd1b40691120827f45106a 130 Pfam PF01192 RNA polymerase Rpb6 8 58 2.6E-12 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS11495 2bfd8792b5bd1b40691120827f45106a 130 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.134 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS11495 2bfd8792b5bd1b40691120827f45106a 130 PANTHER PTHR34476 2 90 1.7E-25 T 22-04-2016 NHAM_RS11495 2bfd8792b5bd1b40691120827f45106a 130 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 3.2E-17 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS11495 2bfd8792b5bd1b40691120827f45106a 130 SUPERFAMILY SSF63562 1 81 3.14E-21 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS11495 2bfd8792b5bd1b40691120827f45106a 130 SMART SM01409 8 60 1.4E-13 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 SUPERFAMILY SSF54814 205 282 2.35E-31 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 Gene3D G3DSA:1.10.150.20 362 425 8.2E-18 T 22-04-2016 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 PANTHER PTHR22648:SF0 7 455 7.5E-175 T 22-04-2016 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 372 421 4.2E-16 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 8 417 30.496 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 SMART SM00322 309 374 0.44 T 22-04-2016 IPR004087 K Homology domain GO:0003676 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 SMART SM00322 235 308 0.35 T 22-04-2016 IPR004087 K Homology domain GO:0003676 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 SUPERFAMILY SSF47794 438 510 4.08E-5 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 Gene3D G3DSA:2.40.50.140 134 203 8.7E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 Gene3D G3DSA:3.30.1480.10 8 131 3.2E-45 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 Gene3D G3DSA:3.30.300.20 204 282 4.6E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 10 349 1.0E-129 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 SUPERFAMILY SSF54814 284 349 1.7E-14 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 SMART SM00316 139 205 4.3E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 SUPERFAMILY SSF69705 9 131 2.22E-38 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 Pfam PF14520 Helix-hairpin-helix domain 440 474 0.0057 T 22-04-2016 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 Pfam PF13184 NusA-like KH domain 235 302 4.3E-28 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 PANTHER PTHR22648 7 455 7.5E-175 T 22-04-2016 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 SUPERFAMILY SSF50249 137 204 1.09E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 Gene3D G3DSA:3.30.300.20 284 353 2.5E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 Gene3D G3DSA:1.10.150.20 439 510 6.1E-15 T 22-04-2016 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 Pfam PF08529 NusA N-terminal domain 10 130 3.8E-33 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 Pfam PF00575 S1 RNA binding domain 137 199 6.0E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 NHAM_RS00140 0213ba77333b2b775af90f78ccec9c8e 536 SUPERFAMILY SSF47794 361 421 8.48E-15 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 Gene3D G3DSA:3.30.470.30 285 390 1.9E-25 T 22-04-2016 NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 SUPERFAMILY SSF56091 253 447 9.11E-44 T 22-04-2016 NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 Gene3D G3DSA:3.30.1490.70 404 447 3.1E-17 T 22-04-2016 NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 Gene3D G3DSA:3.30.1490.70 255 284 3.1E-17 T 22-04-2016 NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 PANTHER PTHR10459:SF70 249 695 1.7E-112 T 22-04-2016 NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 Gene3D G3DSA:2.40.50.140 451 563 3.1E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 262 562 2.5E-99 T 22-04-2016 IPR014146 DNA ligase D, ligase domain NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 Pfam PF04679 ATP dependent DNA ligase C terminal region 462 556 8.3E-22 T 22-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 Pfam PF01068 ATP dependent DNA ligase domain 274 446 1.3E-23 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 601 851 1.1E-87 T 22-04-2016 IPR014145 DNA ligase D, polymerase domain NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 PANTHER PTHR10459 249 695 1.7E-112 T 22-04-2016 NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 271 877 3.5E-208 T 22-04-2016 IPR014143 DNA ligase D NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 SUPERFAMILY SSF50249 453 561 1.6E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 6 162 8.0E-73 T 22-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain NHAM_RS20030 2fff88b028a38638137088eac4e2f631 900 Pfam PF13298 DNA polymerase Ligase (LigD) 38 140 3.5E-39 T 22-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain NHAM_RS02610 c5ab5e28693a74183b1d4c7bed7b67fe 1140 SMART SM00490 190 279 3.8E-15 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS02610 c5ab5e28693a74183b1d4c7bed7b67fe 1140 PANTHER PTHR12131:SF4 24 303 2.6E-140 T 22-04-2016 NHAM_RS02610 c5ab5e28693a74183b1d4c7bed7b67fe 1140 SUPERFAMILY SSF52540 23 144 3.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02610 c5ab5e28693a74183b1d4c7bed7b67fe 1140 PANTHER PTHR12131 24 303 2.6E-140 T 22-04-2016 NHAM_RS02610 c5ab5e28693a74183b1d4c7bed7b67fe 1140 Gene3D G3DSA:3.40.50.300 175 283 8.1E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02610 c5ab5e28693a74183b1d4c7bed7b67fe 1140 Gene3D G3DSA:3.40.50.300 23 128 3.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02610 c5ab5e28693a74183b1d4c7bed7b67fe 1140 SUPERFAMILY SSF52540 155 406 4.09E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02610 c5ab5e28693a74183b1d4c7bed7b67fe 1140 Pfam PF00271 Helicase conserved C-terminal domain 173 278 2.6E-10 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS05950 652feedfa73ee7ad9cd8f49d4c2e2f93 284 PANTHER PTHR24559 35 256 3.1E-58 T 22-04-2016 NHAM_RS05950 652feedfa73ee7ad9cd8f49d4c2e2f93 284 PANTHER PTHR24559:SF185 35 256 3.1E-58 T 22-04-2016 NHAM_RS05950 652feedfa73ee7ad9cd8f49d4c2e2f93 284 SUPERFAMILY SSF53098 100 256 6.83E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS05950 652feedfa73ee7ad9cd8f49d4c2e2f93 284 Pfam PF13683 Integrase core domain 190 255 1.0E-28 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS05950 652feedfa73ee7ad9cd8f49d4c2e2f93 284 Gene3D G3DSA:3.30.420.10 100 256 1.9E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS05950 652feedfa73ee7ad9cd8f49d4c2e2f93 284 Pfam PF13276 HTH-like domain 32 85 1.1E-15 T 22-04-2016 IPR025948 HTH-like domain NHAM_RS14090 7d4fd53ed3280bcacc26d8ed354a7495 69 SMART SM00357 3 69 2.3E-22 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS14090 7d4fd53ed3280bcacc26d8ed354a7495 69 Gene3D G3DSA:2.40.50.140 1 67 8.5E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS14090 7d4fd53ed3280bcacc26d8ed354a7495 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site NHAM_RS14090 7d4fd53ed3280bcacc26d8ed354a7495 69 PANTHER PTHR11544 1 51 3.1E-21 T 22-04-2016 NHAM_RS14090 7d4fd53ed3280bcacc26d8ed354a7495 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 67 8.0E-24 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS14090 7d4fd53ed3280bcacc26d8ed354a7495 69 SUPERFAMILY SSF50249 1 67 9.21E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS14090 7d4fd53ed3280bcacc26d8ed354a7495 69 PIRSF PIRSF002599 1 69 1.6E-21 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 NHAM_RS14090 7d4fd53ed3280bcacc26d8ed354a7495 69 PRINTS PR00050 Cold shock protein signature 25 34 1.5E-11 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS14090 7d4fd53ed3280bcacc26d8ed354a7495 69 PRINTS PR00050 Cold shock protein signature 4 19 1.5E-11 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS14090 7d4fd53ed3280bcacc26d8ed354a7495 69 PRINTS PR00050 Cold shock protein signature 40 58 1.5E-11 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS06540 4b13082ceef64eaeb2e6f1ea23572d9e 305 PANTHER PTHR21071:SF4 3 302 3.7E-117 T 22-04-2016 NHAM_RS06540 4b13082ceef64eaeb2e6f1ea23572d9e 305 SUPERFAMILY SSF56176 25 211 5.09E-40 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NHAM_RS06540 4b13082ceef64eaeb2e6f1ea23572d9e 305 Gene3D G3DSA:3.30.465.10 93 229 6.6E-37 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NHAM_RS06540 4b13082ceef64eaeb2e6f1ea23572d9e 305 SUPERFAMILY SSF56194 202 303 6.8E-38 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS06540 4b13082ceef64eaeb2e6f1ea23572d9e 305 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 305 98.93 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS06540 4b13082ceef64eaeb2e6f1ea23572d9e 305 PANTHER PTHR21071 3 302 3.7E-117 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS06540 4b13082ceef64eaeb2e6f1ea23572d9e 305 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 203 300 1.0E-29 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS06540 4b13082ceef64eaeb2e6f1ea23572d9e 305 Gene3D G3DSA:3.30.43.10 3 86 2.1E-18 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NHAM_RS06540 4b13082ceef64eaeb2e6f1ea23572d9e 305 Pfam PF01565 FAD binding domain 39 167 9.8E-18 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NHAM_RS06540 4b13082ceef64eaeb2e6f1ea23572d9e 305 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 26 302 7.0E-57 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS06540 4b13082ceef64eaeb2e6f1ea23572d9e 305 Gene3D G3DSA:3.90.78.10 230 302 5.3E-32 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 PANTHER PTHR18866:SF92 1 670 0.0 T 22-04-2016 NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 SMART SM00878 336 447 5.4E-52 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 PANTHER PTHR18866 1 670 0.0 T 22-04-2016 NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 1.2E-44 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 SUPERFAMILY SSF51246 331 450 6.8E-38 T 22-04-2016 IPR011054 Rudiment single hybrid motif NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 Gene3D G3DSA:3.30.470.20 203 450 4.1E-96 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 SUPERFAMILY SSF51230 594 670 3.14E-18 T 22-04-2016 IPR011053 Single hybrid motif NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 Gene3D G3DSA:2.40.50.100 600 670 1.3E-20 T 22-04-2016 NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 SUPERFAMILY SSF56059 83 348 4.07E-66 T 22-04-2016 NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 Pfam PF02785 Biotin carboxylase C-terminal domain 336 447 1.5E-34 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 627 644 - T 22-04-2016 IPR001882 Biotin-binding site NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 Gene3D G3DSA:3.30.1490.20 130 202 5.0E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 Pfam PF00364 Biotin-requiring enzyme 606 669 7.2E-15 T 22-04-2016 IPR000089 Biotin/lipoyl attachment NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 Gene3D G3DSA:3.40.50.20 1 129 1.7E-51 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 SUPERFAMILY SSF52440 1 113 4.1E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.7E-81 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS11030 dcb3adf67d2da94c3398dbd6f8d864f8 671 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS01110 1c0712053b088b269c4204a4e1721c8d 397 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 395 2.4E-126 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS01110 1c0712053b088b269c4204a4e1721c8d 397 PANTHER PTHR11808 4 397 5.3E-227 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS01110 1c0712053b088b269c4204a4e1721c8d 397 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 14 394 1.4E-166 T 22-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 NHAM_RS01110 1c0712053b088b269c4204a4e1721c8d 397 Gene3D G3DSA:3.40.640.10 11 260 1.7E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS01110 1c0712053b088b269c4204a4e1721c8d 397 PIRSF PIRSF001434 1 397 3.8E-122 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS01110 1c0712053b088b269c4204a4e1721c8d 397 PANTHER PTHR11808:SF36 4 397 5.3E-227 T 22-04-2016 NHAM_RS01110 1c0712053b088b269c4204a4e1721c8d 397 SUPERFAMILY SSF53383 35 395 2.96E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS01110 1c0712053b088b269c4204a4e1721c8d 397 Gene3D G3DSA:3.90.1150.10 261 396 3.1E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS13350 bb852fbf1c152866a30c4b0506b50c6d 260 Gene3D G3DSA:3.40.50.1820 1 257 5.2E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS13350 bb852fbf1c152866a30c4b0506b50c6d 260 SUPERFAMILY SSF53474 1 257 7.96E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS13350 bb852fbf1c152866a30c4b0506b50c6d 260 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 14 257 4.0E-85 T 22-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 NHAM_RS13350 bb852fbf1c152866a30c4b0506b50c6d 260 Pfam PF00561 alpha/beta hydrolase fold 25 127 1.4E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS13350 bb852fbf1c152866a30c4b0506b50c6d 260 Pfam PF00561 alpha/beta hydrolase fold 172 245 1.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS13350 bb852fbf1c152866a30c4b0506b50c6d 260 PANTHER PTHR10992 11 259 9.0E-56 T 22-04-2016 NHAM_RS13350 bb852fbf1c152866a30c4b0506b50c6d 260 PANTHER PTHR10992:SF861 11 259 9.0E-56 T 22-04-2016 NHAM_RS13350 bb852fbf1c152866a30c4b0506b50c6d 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 1.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS13350 bb852fbf1c152866a30c4b0506b50c6d 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 1.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS13350 bb852fbf1c152866a30c4b0506b50c6d 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 1.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS13350 bb852fbf1c152866a30c4b0506b50c6d 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 1.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS18540 2e394376582426bdfe01cbc51d3fa190 490 Gene3D G3DSA:3.40.50.2000 239 437 4.4E-72 T 22-04-2016 NHAM_RS18540 2e394376582426bdfe01cbc51d3fa190 490 Gene3D G3DSA:3.40.50.2000 2 238 1.4E-58 T 22-04-2016 NHAM_RS18540 2e394376582426bdfe01cbc51d3fa190 490 Pfam PF00982 Glycosyltransferase family 20 19 454 2.7E-114 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 NHAM_RS18540 2e394376582426bdfe01cbc51d3fa190 490 PANTHER PTHR10788 3 468 3.1E-171 T 22-04-2016 NHAM_RS18540 2e394376582426bdfe01cbc51d3fa190 490 PANTHER PTHR10788:SF6 3 468 3.1E-171 T 22-04-2016 NHAM_RS18540 2e394376582426bdfe01cbc51d3fa190 490 SUPERFAMILY SSF53756 2 456 2.32E-132 T 22-04-2016 NHAM_RS06380 1ed11da091788e7dd779e9d7950026be 137 Pfam PF09361 Phasin protein 31 127 2.4E-19 T 22-04-2016 IPR018968 Phasin NHAM_RS06380 1ed11da091788e7dd779e9d7950026be 137 TIGRFAM TIGR01985 phasin_2: phasin 9 131 5.0E-40 T 22-04-2016 IPR010234 Phasin, subfamily 2 NHAM_RS22830 539f2597f3e3d233afe87be54dee1b20 560 Pfam PF03190 Protein of unknown function, DUF255 128 288 1.4E-72 T 22-04-2016 IPR004879 Domain of unknown function DUF255 NHAM_RS22830 539f2597f3e3d233afe87be54dee1b20 560 Gene3D G3DSA:1.50.10.10 334 476 1.4E-9 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NHAM_RS22830 539f2597f3e3d233afe87be54dee1b20 560 PANTHER PTHR12145 127 559 2.4E-190 T 22-04-2016 NHAM_RS22830 539f2597f3e3d233afe87be54dee1b20 560 Gene3D G3DSA:3.40.30.10 145 269 1.1E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS22830 539f2597f3e3d233afe87be54dee1b20 560 SUPERFAMILY SSF48208 312 560 9.52E-50 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NHAM_RS22830 539f2597f3e3d233afe87be54dee1b20 560 SUPERFAMILY SSF52833 126 254 4.64E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS22830 539f2597f3e3d233afe87be54dee1b20 560 PANTHER PTHR12145:SF11 127 559 2.4E-190 T 22-04-2016 NHAM_RS04415 a43bc16c7243754b9199fa887d86b182 147 Gene3D G3DSA:3.30.530.20 3 144 5.4E-43 T 22-04-2016 IPR023393 START-like domain NHAM_RS04415 a43bc16c7243754b9199fa887d86b182 147 PANTHER PTHR36929 1 147 1.2E-23 T 22-04-2016 NHAM_RS04415 a43bc16c7243754b9199fa887d86b182 147 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 142 1.3E-29 T 22-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NHAM_RS04415 a43bc16c7243754b9199fa887d86b182 147 SUPERFAMILY SSF55961 3 144 2.04E-42 T 22-04-2016 NHAM_RS04415 a43bc16c7243754b9199fa887d86b182 147 PANTHER PTHR36929:SF1 1 147 1.2E-23 T 22-04-2016 NHAM_RS13960 05c70b064bdf6ddeca0a549587d5a802 297 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 76 285 5.0E-61 T 22-04-2016 NHAM_RS13960 05c70b064bdf6ddeca0a549587d5a802 297 Pfam PF12710 haloacid dehalogenase-like hydrolase 85 252 1.4E-15 T 22-04-2016 NHAM_RS13960 05c70b064bdf6ddeca0a549587d5a802 297 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 83 254 4.2E-33 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 NHAM_RS13960 05c70b064bdf6ddeca0a549587d5a802 297 Gene3D G3DSA:3.40.50.1000 144 285 2.8E-35 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS13960 05c70b064bdf6ddeca0a549587d5a802 297 PANTHER PTHR10000:SF7 79 293 2.3E-69 T 22-04-2016 NHAM_RS13960 05c70b064bdf6ddeca0a549587d5a802 297 Gene3D G3DSA:1.10.150.210 93 143 1.2E-26 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 NHAM_RS13960 05c70b064bdf6ddeca0a549587d5a802 297 SUPERFAMILY SSF56784 80 287 1.17E-41 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS13960 05c70b064bdf6ddeca0a549587d5a802 297 PANTHER PTHR10000 79 293 2.3E-69 T 22-04-2016 NHAM_RS11220 c16ea068bc73d59859c8969cca94a6a5 556 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 552 1.9E-122 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 NHAM_RS11220 c16ea068bc73d59859c8969cca94a6a5 556 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 356 410 1.2E-9 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain NHAM_RS11220 c16ea068bc73d59859c8969cca94a6a5 556 PANTHER PTHR11203 1 556 5.9E-177 T 22-04-2016 NHAM_RS11220 c16ea068bc73d59859c8969cca94a6a5 556 Gene3D G3DSA:3.60.15.10 6 260 3.4E-67 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS11220 c16ea068bc73d59859c8969cca94a6a5 556 SMART SM00849 21 219 3.5E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS11220 c16ea068bc73d59859c8969cca94a6a5 556 SUPERFAMILY SSF56281 9 425 3.52E-82 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS11220 c16ea068bc73d59859c8969cca94a6a5 556 Pfam PF00753 Metallo-beta-lactamase superfamily 59 260 1.6E-8 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS11220 c16ea068bc73d59859c8969cca94a6a5 556 PANTHER PTHR11203:SF22 1 556 5.9E-177 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 PANTHER PTHR32089 416 695 1.7E-165 T 22-04-2016 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 PANTHER PTHR32089 267 291 1.7E-165 T 22-04-2016 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 PANTHER PTHR32089 321 382 1.7E-165 T 22-04-2016 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 SMART SM00283 438 692 5.2E-51 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 Pfam PF00672 HAMP domain 328 391 3.6E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 SMART SM00304 347 400 1.5E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 PANTHER PTHR32089:SF40 416 695 1.7E-165 T 22-04-2016 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 PANTHER PTHR32089:SF40 267 291 1.7E-165 T 22-04-2016 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 PANTHER PTHR32089:SF40 321 382 1.7E-165 T 22-04-2016 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 Gene3D G3DSA:1.10.287.950 455 662 3.9E-47 T 22-04-2016 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 SUPERFAMILY SSF58104 444 691 7.59E-61 T 22-04-2016 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 SUPERFAMILY SSF58104 376 402 7.59E-61 T 22-04-2016 NHAM_RS05505 b84a78027bcd8e79383cef96c1cee5a1 698 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 499 691 1.2E-36 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NHAM_RS03515 fe4bf60b0e2cdce26f2cefa0c535c82c 399 Pfam PF00561 alpha/beta hydrolase fold 63 372 1.8E-27 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS03515 fe4bf60b0e2cdce26f2cefa0c535c82c 399 PIRSF PIRSF000443 2 392 1.7E-137 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 NHAM_RS03515 fe4bf60b0e2cdce26f2cefa0c535c82c 399 PANTHER PTHR32268 33 385 1.3E-180 T 22-04-2016 NHAM_RS03515 fe4bf60b0e2cdce26f2cefa0c535c82c 399 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 34 384 1.2E-143 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 NHAM_RS03515 fe4bf60b0e2cdce26f2cefa0c535c82c 399 SUPERFAMILY SSF53474 34 385 1.82E-100 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS03515 fe4bf60b0e2cdce26f2cefa0c535c82c 399 Gene3D G3DSA:3.40.50.1820 252 385 7.4E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS03515 fe4bf60b0e2cdce26f2cefa0c535c82c 399 Gene3D G3DSA:3.40.50.1820 46 219 7.4E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS03515 fe4bf60b0e2cdce26f2cefa0c535c82c 399 PANTHER PTHR32268:SF11 33 385 1.3E-180 T 22-04-2016 NHAM_RS03515 fe4bf60b0e2cdce26f2cefa0c535c82c 399 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 18 387 47.287 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 NHAM_RS12485 719d24bb016737ae64a2907054b2eb5a 296 Pfam PF08904 Domain of unknown function (DUF1849) 36 286 5.7E-92 T 22-04-2016 IPR015000 Protein of unknown function DUF1849 NHAM_RS15915 3c42e01d5f8e04a6d01ed0ab25c06980 204 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 NHAM_RS15915 3c42e01d5f8e04a6d01ed0ab25c06980 204 Gene3D G3DSA:3.40.50.1470 1 184 2.5E-64 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NHAM_RS15915 3c42e01d5f8e04a6d01ed0ab25c06980 204 PANTHER PTHR17224 1 194 1.3E-69 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NHAM_RS15915 3c42e01d5f8e04a6d01ed0ab25c06980 204 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 182 6.8E-54 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NHAM_RS15915 3c42e01d5f8e04a6d01ed0ab25c06980 204 Pfam PF01195 Peptidyl-tRNA hydrolase 3 175 2.2E-50 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NHAM_RS15915 3c42e01d5f8e04a6d01ed0ab25c06980 204 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 33.307 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NHAM_RS15915 3c42e01d5f8e04a6d01ed0ab25c06980 204 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 NHAM_RS15915 3c42e01d5f8e04a6d01ed0ab25c06980 204 SUPERFAMILY SSF53178 1 184 1.12E-63 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NHAM_RS23635 c8d46441e026acd4e76ebd9f9bf621dc 211 SMART SM00086 58 100 3.8E-5 T 22-04-2016 IPR001610 PAC motif NHAM_RS23635 c8d46441e026acd4e76ebd9f9bf621dc 211 Gene3D G3DSA:3.30.450.20 118 209 2.3E-20 T 22-04-2016 NHAM_RS23635 c8d46441e026acd4e76ebd9f9bf621dc 211 Gene3D G3DSA:3.30.450.20 3 99 2.0E-24 T 22-04-2016 NHAM_RS23635 c8d46441e026acd4e76ebd9f9bf621dc 211 Pfam PF08447 PAS fold 129 210 9.9E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS23635 c8d46441e026acd4e76ebd9f9bf621dc 211 Pfam PF08447 PAS fold 8 93 3.6E-17 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS23635 c8d46441e026acd4e76ebd9f9bf621dc 211 SUPERFAMILY SSF55785 2 98 9.02E-25 T 22-04-2016 IPR000014 PAS domain NHAM_RS23635 c8d46441e026acd4e76ebd9f9bf621dc 211 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 3 101 2.3E-15 T 22-04-2016 IPR000014 PAS domain NHAM_RS23635 c8d46441e026acd4e76ebd9f9bf621dc 211 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 113 208 3.1E-10 T 22-04-2016 IPR000014 PAS domain NHAM_RS23635 c8d46441e026acd4e76ebd9f9bf621dc 211 SUPERFAMILY SSF55785 118 209 3.14E-22 T 22-04-2016 IPR000014 PAS domain NHAM_RS23635 c8d46441e026acd4e76ebd9f9bf621dc 211 PANTHER PTHR24422:SF12 1 208 7.3E-98 T 22-04-2016 NHAM_RS23635 c8d46441e026acd4e76ebd9f9bf621dc 211 PANTHER PTHR24422 1 208 7.3E-98 T 22-04-2016 NHAM_RS16210 59e7d6134b6ef2577b86d00bf079bc64 327 PANTHER PTHR22749:SF0 1 313 2.2E-124 T 22-04-2016 NHAM_RS16210 59e7d6134b6ef2577b86d00bf079bc64 327 Gene3D G3DSA:3.40.50.620 7 183 1.6E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS16210 59e7d6134b6ef2577b86d00bf079bc64 327 Gene3D G3DSA:2.40.30.30 184 315 4.0E-43 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 NHAM_RS16210 59e7d6134b6ef2577b86d00bf079bc64 327 PIRSF PIRSF004491 5 319 1.8E-91 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 NHAM_RS16210 59e7d6134b6ef2577b86d00bf079bc64 327 Pfam PF01687 Riboflavin kinase 188 313 4.5E-35 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 NHAM_RS16210 59e7d6134b6ef2577b86d00bf079bc64 327 SMART SM00904 187 314 7.7E-56 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 NHAM_RS16210 59e7d6134b6ef2577b86d00bf079bc64 327 SUPERFAMILY SSF52374 19 179 8.45E-30 T 22-04-2016 NHAM_RS16210 59e7d6134b6ef2577b86d00bf079bc64 327 SUPERFAMILY SSF82114 178 314 8.72E-43 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 NHAM_RS16210 59e7d6134b6ef2577b86d00bf079bc64 327 PANTHER PTHR22749 1 313 2.2E-124 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 NHAM_RS16210 59e7d6134b6ef2577b86d00bf079bc64 327 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 23 312 1.5E-72 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 NHAM_RS16210 59e7d6134b6ef2577b86d00bf079bc64 327 Pfam PF06574 FAD synthetase 17 170 4.2E-45 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 NHAM_RS04585 03e56a5bf819857b142e14610d6ecbed 756 PIRSF PIRSF000379 13 756 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 NHAM_RS04585 03e56a5bf819857b142e14610d6ecbed 756 Gene3D G3DSA:3.20.70.20 13 754 1.8E-288 T 22-04-2016 NHAM_RS04585 03e56a5bf819857b142e14610d6ecbed 756 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 17 755 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 NHAM_RS04585 03e56a5bf819857b142e14610d6ecbed 756 PANTHER PTHR30191:SF0 17 756 0.0 T 22-04-2016 NHAM_RS04585 03e56a5bf819857b142e14610d6ecbed 756 SUPERFAMILY SSF51998 13 754 1.04E-266 T 22-04-2016 NHAM_RS04585 03e56a5bf819857b142e14610d6ecbed 756 Pfam PF02901 Pyruvate formate lyase-like 31 615 5.3E-201 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 NHAM_RS04585 03e56a5bf819857b142e14610d6ecbed 756 Pfam PF01228 Glycine radical 631 737 2.4E-36 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 NHAM_RS04585 03e56a5bf819857b142e14610d6ecbed 756 PANTHER PTHR30191 17 756 0.0 T 22-04-2016 NHAM_RS04585 03e56a5bf819857b142e14610d6ecbed 756 ProSitePatterns PS00850 Glycine radical domain signature. 726 734 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site NHAM_RS03990 98958436ef04626fe559167723ebe16b 101 PANTHER PTHR33473 3 101 5.6E-34 T 22-04-2016 NHAM_RS03990 98958436ef04626fe559167723ebe16b 101 SUPERFAMILY SSF54736 15 99 1.15E-25 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NHAM_RS03990 98958436ef04626fe559167723ebe16b 101 Gene3D G3DSA:3.30.1390.10 3 100 4.1E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NHAM_RS03990 98958436ef04626fe559167723ebe16b 101 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 7 95 22.071 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS NHAM_RS03990 98958436ef04626fe559167723ebe16b 101 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 18 95 1.2E-25 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 NHAM_RS04535 46cf81815dc10c58c492f0cac9cfee73 266 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 9 236 1.2E-104 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 NHAM_RS04535 46cf81815dc10c58c492f0cac9cfee73 266 PANTHER PTHR34383 1 265 1.8E-174 T 22-04-2016 NHAM_RS04535 46cf81815dc10c58c492f0cac9cfee73 266 SUPERFAMILY SSF52540 41 228 1.07E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04535 46cf81815dc10c58c492f0cac9cfee73 266 Gene3D G3DSA:3.40.50.300 8 251 1.6E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04535 46cf81815dc10c58c492f0cac9cfee73 266 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 10 234 2.1E-95 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related NHAM_RS04535 46cf81815dc10c58c492f0cac9cfee73 266 PIRSF PIRSF028756 1 266 1.8E-114 T 22-04-2016 IPR016898 Polyphosphate kinase 2 NHAM_RS04535 46cf81815dc10c58c492f0cac9cfee73 266 PANTHER PTHR34383:SF2 1 265 1.8E-174 T 22-04-2016 NHAM_RS13610 cde0a9c71b2c204c29a2ea3455efd63a 197 Pfam PF13362 Toprim domain 55 123 1.3E-7 T 22-04-2016 IPR006171 Toprim domain NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 PANTHER PTHR22912 18 205 9.8E-23 T 22-04-2016 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 SUPERFAMILY SSF51905 27 359 4.26E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 PANTHER PTHR22912:SF180 18 205 9.8E-23 T 22-04-2016 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 Gene3D G3DSA:3.50.50.60 30 130 4.0E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 PANTHER PTHR22912:SF180 221 370 9.8E-23 T 22-04-2016 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 185 203 1.1E-12 T 22-04-2016 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 33 52 1.1E-12 T 22-04-2016 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 329 1.1E-12 T 22-04-2016 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 125 143 1.1E-12 T 22-04-2016 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 Gene3D G3DSA:3.50.50.60 131 354 1.1E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 PANTHER PTHR22912 221 370 9.8E-23 T 22-04-2016 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 32 349 1.0E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 322 329 1.5E-9 T 22-04-2016 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 210 1.5E-9 T 22-04-2016 NHAM_RS08090 72baefb20ddcd956fecdae6f93cd2d54 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 32 54 1.5E-9 T 22-04-2016 NHAM_RS02885 c27a7663756f0fe19de07dcc8b652017 114 SUPERFAMILY SSF56399 3 111 1.61E-37 T 22-04-2016 NHAM_RS02885 c27a7663756f0fe19de07dcc8b652017 114 Pfam PF06108 Protein of unknown function (DUF952) 7 96 8.1E-28 T 22-04-2016 IPR009297 Protein of unknown function DUF952 NHAM_RS02885 c27a7663756f0fe19de07dcc8b652017 114 PANTHER PTHR34129:SF1 2 113 1.3E-32 T 22-04-2016 NHAM_RS02885 c27a7663756f0fe19de07dcc8b652017 114 PANTHER PTHR34129 2 113 1.3E-32 T 22-04-2016 NHAM_RS05725 fabfd9cc3b0346f770b790290f103ccd 522 Gene3D G3DSA:3.40.50.1820 80 485 1.2E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS05725 fabfd9cc3b0346f770b790290f103ccd 522 PANTHER PTHR11802 115 265 2.2E-21 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 NHAM_RS05725 fabfd9cc3b0346f770b790290f103ccd 522 SUPERFAMILY SSF53474 78 506 7.26E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS05725 fabfd9cc3b0346f770b790290f103ccd 522 PANTHER PTHR11802:SF30 115 265 2.2E-21 T 22-04-2016 NHAM_RS05725 fabfd9cc3b0346f770b790290f103ccd 522 Pfam PF00450 Serine carboxypeptidase 116 250 4.9E-17 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 NHAM_RS05725 fabfd9cc3b0346f770b790290f103ccd 522 ProSitePatterns PS00131 Serine carboxypeptidases, serine active site. 229 236 - T 22-04-2016 IPR018202 Serine carboxypeptidase, serine active site NHAM_RS17585 7e0836675bd277d6b3bbba5aba041b3b 289 Pfam PF00950 ABC 3 transport family 13 271 9.0E-56 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 NHAM_RS17585 7e0836675bd277d6b3bbba5aba041b3b 289 SUPERFAMILY SSF81345 12 267 3.66E-22 T 22-04-2016 IPR029022 ABC transporter, BtuC-like NHAM_RS17585 7e0836675bd277d6b3bbba5aba041b3b 289 PANTHER PTHR30477 7 288 1.2E-97 T 22-04-2016 NHAM_RS17585 7e0836675bd277d6b3bbba5aba041b3b 289 PANTHER PTHR30477:SF3 7 288 1.2E-97 T 22-04-2016 NHAM_RS06290 77360f0ec7146c095dab5cae1a534987 95 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 10 55 12.558 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 NHAM_RS06290 77360f0ec7146c095dab5cae1a534987 95 Pfam PF01165 Ribosomal protein S21 2 55 4.8E-20 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 NHAM_RS06290 77360f0ec7146c095dab5cae1a534987 95 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 56 3.0E-21 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 NHAM_RS06290 77360f0ec7146c095dab5cae1a534987 95 PANTHER PTHR21109:SF3 2 82 3.0E-46 T 22-04-2016 NHAM_RS06290 77360f0ec7146c095dab5cae1a534987 95 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS06290 77360f0ec7146c095dab5cae1a534987 95 PANTHER PTHR21109 2 82 3.0E-46 T 22-04-2016 NHAM_RS06290 77360f0ec7146c095dab5cae1a534987 95 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 40 3.0E-9 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 NHAM_RS05400 08fec07f9e109eb414681b5ac384ee55 184 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 174 8.2E-70 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NHAM_RS05400 08fec07f9e109eb414681b5ac384ee55 184 PANTHER PTHR21047 1 184 3.9E-70 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NHAM_RS05400 08fec07f9e109eb414681b5ac384ee55 184 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 175 3.4E-72 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NHAM_RS05400 08fec07f9e109eb414681b5ac384ee55 184 SUPERFAMILY SSF51182 1 181 1.38E-73 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS05400 08fec07f9e109eb414681b5ac384ee55 184 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 183 5.0E-104 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NHAM_RS05400 08fec07f9e109eb414681b5ac384ee55 184 Gene3D G3DSA:2.60.120.10 1 178 3.1E-76 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS02255 d5bce5365677f290bd56de1f7455c4fb 221 PANTHER PTHR24220:SF284 22 219 2.2E-92 T 22-04-2016 NHAM_RS02255 d5bce5365677f290bd56de1f7455c4fb 221 SMART SM00382 22 209 1.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS02255 d5bce5365677f290bd56de1f7455c4fb 221 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS02255 d5bce5365677f290bd56de1f7455c4fb 221 SUPERFAMILY SSF52540 5 216 4.55E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02255 d5bce5365677f290bd56de1f7455c4fb 221 Pfam PF00005 ABC transporter 21 159 8.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS02255 d5bce5365677f290bd56de1f7455c4fb 221 Gene3D G3DSA:3.40.50.300 21 216 4.4E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02255 d5bce5365677f290bd56de1f7455c4fb 221 PANTHER PTHR24220 22 219 2.2E-92 T 22-04-2016 NHAM_RS02255 d5bce5365677f290bd56de1f7455c4fb 221 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 217 5.0E-92 T 22-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 Gene3D G3DSA:1.10.275.10 3 108 4.9E-38 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 PANTHER PTHR11444:SF3 2 458 3.4E-219 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 Pfam PF14698 Argininosuccinate lyase C-terminal 365 434 6.3E-22 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 9.4E-64 T 22-04-2016 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 9.4E-64 T 22-04-2016 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 9.4E-64 T 22-04-2016 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 9.4E-64 T 22-04-2016 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 9.4E-64 T 22-04-2016 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 9.4E-64 T 22-04-2016 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 SUPERFAMILY SSF48557 5 458 2.36E-142 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 PANTHER PTHR11444 2 458 3.4E-219 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 TIGRFAM TIGR00838 argH: argininosuccinate lyase 5 453 2.7E-173 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 Pfam PF00206 Lyase 8 302 1.6E-73 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 Gene3D G3DSA:1.10.40.30 376 434 3.8E-27 T 22-04-2016 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 456 41.31 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 Gene3D G3DSA:1.20.200.10 109 375 1.1E-98 T 22-04-2016 NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 5.3E-30 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 5.3E-30 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 5.3E-30 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS17845 44feda4c933d138e46a8d145a9f52c83 465 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 5.3E-30 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 PANTHER PTHR10459 210 560 3.1E-57 T 22-04-2016 NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 3 552 1.3E-242 T 22-04-2016 IPR026333 ATP-dependent DNA ligase, PP_1105 family NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 Gene3D G3DSA:2.40.50.140 425 553 1.6E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 Gene3D G3DSA:3.30.470.30 243 359 1.8E-21 T 22-04-2016 NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 238 246 - T 22-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 SUPERFAMILY SSF56091 212 419 1.79E-46 T 22-04-2016 NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 Pfam PF04679 ATP dependent DNA ligase C terminal region 440 537 6.5E-10 T 22-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 Pfam PF01068 ATP dependent DNA ligase domain 217 419 1.9E-22 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 PANTHER PTHR10459:SF10 210 560 3.1E-57 T 22-04-2016 NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 Gene3D G3DSA:3.30.1490.70 371 420 7.9E-18 T 22-04-2016 NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 Gene3D G3DSA:3.30.1490.70 208 242 7.9E-18 T 22-04-2016 NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 SUPERFAMILY SSF50249 425 553 5.82E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS02870 a7f72771e79b7fd1ebc33d60f39abb2b 561 Pfam PF04675 DNA ligase N terminus 3 164 2.8E-5 T 22-04-2016 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 NHAM_RS17435 bb4d1be6e8141c20c355d1f393016e27 66 SMART SM00357 3 66 8.4E-22 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS17435 bb4d1be6e8141c20c355d1f393016e27 66 PANTHER PTHR11544 1 63 1.2E-22 T 22-04-2016 NHAM_RS17435 bb4d1be6e8141c20c355d1f393016e27 66 PIRSF PIRSF002599 1 66 1.9E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 NHAM_RS17435 bb4d1be6e8141c20c355d1f393016e27 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site NHAM_RS17435 bb4d1be6e8141c20c355d1f393016e27 66 SUPERFAMILY SSF50249 1 65 1.95E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS17435 bb4d1be6e8141c20c355d1f393016e27 66 Gene3D G3DSA:2.40.50.140 1 65 4.6E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS17435 bb4d1be6e8141c20c355d1f393016e27 66 PRINTS PR00050 Cold shock protein signature 25 34 1.4E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS17435 bb4d1be6e8141c20c355d1f393016e27 66 PRINTS PR00050 Cold shock protein signature 4 19 1.4E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS17435 bb4d1be6e8141c20c355d1f393016e27 66 PRINTS PR00050 Cold shock protein signature 40 58 1.4E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS17435 bb4d1be6e8141c20c355d1f393016e27 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 6.0E-25 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS03835 55939d4d6f25240fbcd4d4cc2c79f93a 403 Pfam PF00482 Type II secretion system (T2SS), protein F 272 393 1.4E-21 T 22-04-2016 IPR018076 Type II secretion system F domain NHAM_RS03835 55939d4d6f25240fbcd4d4cc2c79f93a 403 Pfam PF00482 Type II secretion system (T2SS), protein F 69 192 1.3E-24 T 22-04-2016 IPR018076 Type II secretion system F domain NHAM_RS03835 55939d4d6f25240fbcd4d4cc2c79f93a 403 PANTHER PTHR30012 2 403 5.1E-113 T 22-04-2016 NHAM_RS03835 55939d4d6f25240fbcd4d4cc2c79f93a 403 PANTHER PTHR30012:SF0 2 403 5.1E-113 T 22-04-2016 NHAM_RS03835 55939d4d6f25240fbcd4d4cc2c79f93a 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 3.0E-12 T 22-04-2016 IPR003004 GspF/PilC family NHAM_RS03835 55939d4d6f25240fbcd4d4cc2c79f93a 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 3.0E-12 T 22-04-2016 IPR003004 GspF/PilC family NHAM_RS03835 55939d4d6f25240fbcd4d4cc2c79f93a 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 3.0E-12 T 22-04-2016 IPR003004 GspF/PilC family NHAM_RS03835 55939d4d6f25240fbcd4d4cc2c79f93a 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 3.0E-12 T 22-04-2016 IPR003004 GspF/PilC family NHAM_RS17280 7f72eeb99482d849713f365b85ac9f7c 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 155 6.6E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS17280 7f72eeb99482d849713f365b85ac9f7c 708 PANTHER PTHR32552 70 708 4.7E-42 T 22-04-2016 NHAM_RS17280 7f72eeb99482d849713f365b85ac9f7c 708 Gene3D G3DSA:2.40.170.20 157 708 1.0E-76 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS17280 7f72eeb99482d849713f365b85ac9f7c 708 SUPERFAMILY SSF56935 56 708 4.89E-94 T 22-04-2016 NHAM_RS17280 7f72eeb99482d849713f365b85ac9f7c 708 Pfam PF00593 TonB dependent receptor 460 706 3.3E-34 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS17280 7f72eeb99482d849713f365b85ac9f7c 708 Gene3D G3DSA:2.170.130.10 38 156 4.0E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS11125 9b8bcb9e0a535c4c2c9dd309e6f3d914 473 Pfam PF01435 Peptidase family M48 56 251 9.7E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NHAM_RS11125 9b8bcb9e0a535c4c2c9dd309e6f3d914 473 Pfam PF13432 Tetratricopeptide repeat 302 362 2.5E-7 T 22-04-2016 NHAM_RS11125 9b8bcb9e0a535c4c2c9dd309e6f3d914 473 PANTHER PTHR22726 168 340 1.2E-53 T 22-04-2016 NHAM_RS11125 9b8bcb9e0a535c4c2c9dd309e6f3d914 473 PANTHER PTHR22726 45 150 1.2E-53 T 22-04-2016 NHAM_RS11125 9b8bcb9e0a535c4c2c9dd309e6f3d914 473 Gene3D G3DSA:3.30.2010.10 48 127 4.6E-15 T 22-04-2016 NHAM_RS11125 9b8bcb9e0a535c4c2c9dd309e6f3d914 473 PANTHER PTHR22726:SF10 168 340 1.2E-53 T 22-04-2016 NHAM_RS11125 9b8bcb9e0a535c4c2c9dd309e6f3d914 473 PANTHER PTHR22726:SF10 45 150 1.2E-53 T 22-04-2016 NHAM_RS11125 9b8bcb9e0a535c4c2c9dd309e6f3d914 473 Gene3D G3DSA:1.25.40.10 305 442 7.0E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS11125 9b8bcb9e0a535c4c2c9dd309e6f3d914 473 SUPERFAMILY SSF48452 302 440 1.08E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 SUPERFAMILY SSF55021 446 527 5.73E-17 T 22-04-2016 NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 316 3.0E-36 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 Gene3D G3DSA:3.40.50.720 2 110 1.1E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 284 6.3E-63 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 Pfam PF01842 ACT domain 457 519 4.3E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 Gene3D G3DSA:3.30.70.260 448 526 8.8E-19 T 22-04-2016 NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 SUPERFAMILY SSF51735 101 285 3.9E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 5 528 4.5E-207 T 22-04-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 PANTHER PTHR10996:SF20 1 358 1.1E-172 T 22-04-2016 NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 SUPERFAMILY SSF143548 322 451 4.18E-37 T 22-04-2016 IPR029009 Allosteric substrate binding domain NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 Gene3D G3DSA:3.30.1330.90 321 447 1.9E-45 T 22-04-2016 IPR029009 Allosteric substrate binding domain NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 SUPERFAMILY SSF52283 3 130 7.94E-38 T 22-04-2016 NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 PANTHER PTHR10996 1 358 1.1E-172 T 22-04-2016 NHAM_RS05710 35537f6a9a61a39b4fdc3fedd92cb4c7 529 Gene3D G3DSA:3.40.50.720 111 286 6.5E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11590 8fe8118340d800d763b4d8389cfdc744 491 ProSitePatterns PS00571 Amidases signature. 156 187 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NHAM_RS11590 8fe8118340d800d763b4d8389cfdc744 491 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 483 89.047 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NHAM_RS11590 8fe8118340d800d763b4d8389cfdc744 491 PANTHER PTHR11895 1 489 8.3E-208 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NHAM_RS11590 8fe8118340d800d763b4d8389cfdc744 491 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 16 481 1.0E-165 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NHAM_RS11590 8fe8118340d800d763b4d8389cfdc744 491 PANTHER PTHR11895:SF7 1 489 8.3E-208 T 22-04-2016 NHAM_RS11590 8fe8118340d800d763b4d8389cfdc744 491 Gene3D G3DSA:3.90.1300.10 1 487 3.9E-170 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NHAM_RS11590 8fe8118340d800d763b4d8389cfdc744 491 Pfam PF01425 Amidase 25 472 1.1E-146 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NHAM_RS11590 8fe8118340d800d763b4d8389cfdc744 491 SUPERFAMILY SSF75304 1 482 1.16E-150 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 PANTHER PTHR11540:SF16 1 322 4.0E-145 T 22-04-2016 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 PANTHER PTHR11540 1 322 4.0E-145 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 309 1.0E-126 T 22-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 7.6E-29 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 7.6E-29 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 7.6E-29 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 7.6E-29 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 7.6E-29 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 313 41.363 T 22-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 Gene3D G3DSA:3.40.50.720 2 144 2.6E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 PIRSF PIRSF000102 1 316 2.4E-99 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 SUPERFAMILY SSF56327 144 312 1.73E-54 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 1.9E-37 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 SUPERFAMILY SSF51735 5 144 1.9E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 Gene3D G3DSA:3.90.110.10 145 314 5.8E-61 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 NHAM_RS02830 8e590875be6898a1cdae611ee0b977dc 322 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 5.3E-29 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 NHAM_RS02395 24fee497a3212f3d90013274817a1006 592 Pfam PF13177 DNA polymerase III, delta subunit 27 191 2.2E-30 T 22-04-2016 NHAM_RS02395 24fee497a3212f3d90013274817a1006 592 PANTHER PTHR11669 3 437 2.1E-168 T 22-04-2016 NHAM_RS02395 24fee497a3212f3d90013274817a1006 592 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 453 566 1.9E-38 T 22-04-2016 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal NHAM_RS02395 24fee497a3212f3d90013274817a1006 592 Gene3D G3DSA:3.40.50.300 9 178 2.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02395 24fee497a3212f3d90013274817a1006 592 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 10 371 3.5E-120 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 NHAM_RS02395 24fee497a3212f3d90013274817a1006 592 SUPERFAMILY SSF52540 40 236 4.11E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02395 24fee497a3212f3d90013274817a1006 592 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 245 387 1.2E-52 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 NHAM_RS02395 24fee497a3212f3d90013274817a1006 592 Gene3D G3DSA:1.20.272.10 256 373 1.6E-23 T 22-04-2016 NHAM_RS02395 24fee497a3212f3d90013274817a1006 592 SUPERFAMILY SSF48019 256 382 5.53E-28 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 NHAM_RS02395 24fee497a3212f3d90013274817a1006 592 SMART SM00382 44 192 2.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS02395 24fee497a3212f3d90013274817a1006 592 Gene3D G3DSA:1.10.8.60 179 255 2.9E-31 T 22-04-2016 NHAM_RS02395 24fee497a3212f3d90013274817a1006 592 PANTHER PTHR11669:SF0 3 437 2.1E-168 T 22-04-2016 NHAM_RS18440 0623e863bce186ed32781f666fd615d3 398 PANTHER PTHR23537 7 398 1.9E-84 T 22-04-2016 NHAM_RS18440 0623e863bce186ed32781f666fd615d3 398 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 25 385 5.7E-94 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB NHAM_RS18440 0623e863bce186ed32781f666fd615d3 398 PANTHER PTHR23537:SF1 7 398 1.9E-84 T 22-04-2016 NHAM_RS18440 0623e863bce186ed32781f666fd615d3 398 Gene3D G3DSA:1.20.1250.20 13 196 2.6E-18 T 22-04-2016 NHAM_RS18440 0623e863bce186ed32781f666fd615d3 398 Gene3D G3DSA:1.20.1250.20 214 393 3.5E-10 T 22-04-2016 NHAM_RS18440 0623e863bce186ed32781f666fd615d3 398 SUPERFAMILY SSF103473 9 395 2.09E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 Gene3D G3DSA:3.90.190.20 330 465 6.3E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 Pfam PF01225 Mur ligase family, catalytic domain 27 101 1.7E-11 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 463 4.2E-111 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 PANTHER PTHR23135 14 464 4.3E-125 T 22-04-2016 NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 Pfam PF02875 Mur ligase family, glutamate ligase domain 336 405 1.5E-9 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 PANTHER PTHR23135:SF3 14 464 4.3E-125 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 SUPERFAMILY SSF53244 328 463 5.26E-30 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 SUPERFAMILY SSF63418 6 102 3.14E-21 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 6 464 31.198 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 Pfam PF08245 Mur ligase middle domain 112 302 1.6E-46 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 Gene3D G3DSA:3.40.1390.10 16 95 1.2E-20 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 Gene3D G3DSA:3.40.1190.10 96 317 2.0E-64 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06505 ad1737448dcd11086079599443299dbd 478 SUPERFAMILY SSF53623 108 320 1.44E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06830 96cce8eda715fa05cc69fcca71110166 537 SUPERFAMILY SSF64518 194 537 7.06E-34 T 22-04-2016 NHAM_RS06830 96cce8eda715fa05cc69fcca71110166 537 Gene3D G3DSA:1.20.1330.10 369 481 2.1E-8 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NHAM_RS06830 96cce8eda715fa05cc69fcca71110166 537 Pfam PF00669 Bacterial flagellin N-terminal helical region 13 110 1.2E-7 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NHAM_RS06830 96cce8eda715fa05cc69fcca71110166 537 Pfam PF00700 Bacterial flagellin C-terminal helical region 452 536 2.7E-7 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NHAM_RS06830 96cce8eda715fa05cc69fcca71110166 537 SUPERFAMILY SSF64518 1 238 1.7E-19 T 22-04-2016 NHAM_RS07555 8941c34dd8b35ff9b150b2fac809590a 232 Gene3D G3DSA:3.40.50.1000 2 22 1.7E-37 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS07555 8941c34dd8b35ff9b150b2fac809590a 232 Gene3D G3DSA:3.40.50.1000 89 220 1.7E-37 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS07555 8941c34dd8b35ff9b150b2fac809590a 232 PANTHER PTHR18901:SF14 1 220 2.7E-49 T 22-04-2016 NHAM_RS07555 8941c34dd8b35ff9b150b2fac809590a 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 106 186 2.5E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NHAM_RS07555 8941c34dd8b35ff9b150b2fac809590a 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 8.8E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NHAM_RS07555 8941c34dd8b35ff9b150b2fac809590a 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 8.8E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NHAM_RS07555 8941c34dd8b35ff9b150b2fac809590a 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 8.8E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NHAM_RS07555 8941c34dd8b35ff9b150b2fac809590a 232 PANTHER PTHR18901 1 220 2.7E-49 T 22-04-2016 NHAM_RS07555 8941c34dd8b35ff9b150b2fac809590a 232 Gene3D G3DSA:1.10.150.240 23 88 5.5E-15 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 NHAM_RS07555 8941c34dd8b35ff9b150b2fac809590a 232 SUPERFAMILY SSF56784 5 220 3.12E-54 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS07555 8941c34dd8b35ff9b150b2fac809590a 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 219 5.1E-51 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 NHAM_RS07555 8941c34dd8b35ff9b150b2fac809590a 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 192 5.3E-32 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS14675 0b57ac437b1def046a7175b2e4fa2f35 272 PANTHER PTHR30163 7 267 9.5E-95 T 22-04-2016 IPR011757 Lytic transglycosylase MltB NHAM_RS14675 0b57ac437b1def046a7175b2e4fa2f35 272 Gene3D G3DSA:1.10.530.10 237 271 1.2E-4 T 22-04-2016 NHAM_RS14675 0b57ac437b1def046a7175b2e4fa2f35 272 Gene3D G3DSA:1.10.530.10 77 133 1.7E-26 T 22-04-2016 NHAM_RS14675 0b57ac437b1def046a7175b2e4fa2f35 272 Gene3D G3DSA:1.10.530.10 215 236 1.7E-26 T 22-04-2016 NHAM_RS14675 0b57ac437b1def046a7175b2e4fa2f35 272 Pfam PF13406 Transglycosylase SLT domain 32 239 3.8E-74 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 NHAM_RS14675 0b57ac437b1def046a7175b2e4fa2f35 272 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 31 237 6.5E-80 T 22-04-2016 IPR011970 Lytic murein transglycosylase NHAM_RS14675 0b57ac437b1def046a7175b2e4fa2f35 272 PANTHER PTHR30163:SF2 7 267 9.5E-95 T 22-04-2016 NHAM_RS14675 0b57ac437b1def046a7175b2e4fa2f35 272 SUPERFAMILY SSF53955 19 271 1.01E-74 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS03500 21404f1b0bbc2b23ba44b41a1bc6f7c5 313 Pfam PF02153 Prephenate dehydrogenase 22 280 8.4E-79 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 NHAM_RS03500 21404f1b0bbc2b23ba44b41a1bc6f7c5 313 SUPERFAMILY SSF51735 9 175 3.96E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS03500 21404f1b0bbc2b23ba44b41a1bc6f7c5 313 PANTHER PTHR21363 1 292 3.3E-84 T 22-04-2016 NHAM_RS03500 21404f1b0bbc2b23ba44b41a1bc6f7c5 313 PANTHER PTHR21363:SF0 1 292 3.3E-84 T 22-04-2016 NHAM_RS03500 21404f1b0bbc2b23ba44b41a1bc6f7c5 313 Gene3D G3DSA:3.40.50.720 5 180 2.1E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS03500 21404f1b0bbc2b23ba44b41a1bc6f7c5 313 SUPERFAMILY SSF48179 179 289 7.71E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 SUPERFAMILY SSF52374 1 343 2.12E-107 T 22-04-2016 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 Gene3D G3DSA:3.40.50.620 1 107 4.1E-70 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 Gene3D G3DSA:3.40.50.620 222 330 4.1E-70 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 PANTHER PTHR11946:SF1 1 502 9.6E-238 T 22-04-2016 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 PANTHER PTHR11946 1 502 9.6E-238 T 22-04-2016 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 SUPERFAMILY SSF47323 345 501 3.36E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 Gene3D G3DSA:2.170.220.10 110 221 8.8E-47 T 22-04-2016 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 501 45.607 T 22-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 1 477 1.1E-151 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 17 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 Pfam PF09334 tRNA synthetases class I (M) 147 356 2.3E-64 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 Pfam PF09334 tRNA synthetases class I (M) 1 132 1.7E-43 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 PRINTS PR01041 Methionyl-tRNA synthetase signature 252 267 4.0E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 PRINTS PR01041 Methionyl-tRNA synthetase signature 81 92 4.0E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 PRINTS PR01041 Methionyl-tRNA synthetase signature 344 355 4.0E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 PRINTS PR01041 Methionyl-tRNA synthetase signature 1 14 4.0E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 PRINTS PR01041 Methionyl-tRNA synthetase signature 33 47 4.0E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 PRINTS PR01041 Methionyl-tRNA synthetase signature 220 231 4.0E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 NHAM_RS10225 b0222a4007c0fca31664d832cc74e949 508 Gene3D G3DSA:1.10.730.10 334 501 8.4E-54 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 290 339 4.6E-11 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 SUPERFAMILY SSF52540 363 537 6.53E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 PANTHER PTHR23115:SF184 350 692 2.2E-200 T 22-04-2016 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 PANTHER PTHR23115:SF184 716 868 2.2E-200 T 22-04-2016 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 SUPERFAMILY SSF52156 651 775 1.26E-35 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 SUPERFAMILY SSF50447 770 866 3.73E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 PANTHER PTHR23115 350 692 2.2E-200 T 22-04-2016 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 PANTHER PTHR23115 716 868 2.2E-200 T 22-04-2016 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 SUPERFAMILY SSF50447 539 622 5.65E-26 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 18 52 1.1E-7 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 Pfam PF00009 Elongation factor Tu GTP binding domain 370 526 6.9E-32 T 22-04-2016 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 Gene3D G3DSA:2.40.30.10 537 630 3.2E-25 T 22-04-2016 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 9 866 16.859 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 Pfam PF11987 Translation-initiation factor 2 653 758 3.0E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 284 868 1.0E-233 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 ProSitePatterns PS01176 Initiation factor 2 signature. 819 841 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 368 525 6.2E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 Gene3D G3DSA:3.40.50.10050 669 747 1.7E-24 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 Gene3D G3DSA:2.40.30.10 770 866 1.9E-37 T 22-04-2016 NHAM_RS00150 e9017a6694bd27d3fe48dbcdc9cccf88 868 Gene3D G3DSA:3.40.50.300 366 525 2.4E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07375 408e9d465da62b8069b81b83212dd011 416 SUPERFAMILY SSF103473 16 396 7.06E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS07375 408e9d465da62b8069b81b83212dd011 416 Gene3D G3DSA:1.20.1250.20 224 395 5.4E-6 T 22-04-2016 NHAM_RS07375 408e9d465da62b8069b81b83212dd011 416 Gene3D G3DSA:1.20.1250.20 18 207 3.3E-23 T 22-04-2016 NHAM_RS07375 408e9d465da62b8069b81b83212dd011 416 PANTHER PTHR23515 14 391 2.8E-37 T 22-04-2016 NHAM_RS07375 408e9d465da62b8069b81b83212dd011 416 Pfam PF07690 Major Facilitator Superfamily 25 359 1.4E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS09865 b4c97b8bc42782934e0da8133bf3abfa 158 SUPERFAMILY SSF47175 45 151 2.94E-14 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 NHAM_RS06325 9548eeacae0b7967d2453859d7e99f78 367 Pfam PF01266 FAD dependent oxidoreductase 6 364 2.1E-65 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NHAM_RS06325 9548eeacae0b7967d2453859d7e99f78 367 Gene3D G3DSA:3.30.9.10 224 233 1.3E-6 T 22-04-2016 NHAM_RS06325 9548eeacae0b7967d2453859d7e99f78 367 Gene3D G3DSA:3.30.9.10 86 138 1.3E-6 T 22-04-2016 NHAM_RS06325 9548eeacae0b7967d2453859d7e99f78 367 PANTHER PTHR13847:SF207 1 366 2.5E-201 T 22-04-2016 NHAM_RS06325 9548eeacae0b7967d2453859d7e99f78 367 PANTHER PTHR13847 1 366 2.5E-201 T 22-04-2016 NHAM_RS06325 9548eeacae0b7967d2453859d7e99f78 367 Gene3D G3DSA:3.50.50.60 139 219 1.3E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS06325 9548eeacae0b7967d2453859d7e99f78 367 Gene3D G3DSA:3.50.50.60 323 365 1.3E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS06325 9548eeacae0b7967d2453859d7e99f78 367 Gene3D G3DSA:3.50.50.60 4 84 1.3E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS06325 9548eeacae0b7967d2453859d7e99f78 367 SUPERFAMILY SSF51905 6 319 1.12E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS11225 71999b0e4425b8491f8a0328d72ca734 270 Gene3D G3DSA:3.30.930.10 10 212 1.9E-48 T 22-04-2016 NHAM_RS11225 71999b0e4425b8491f8a0328d72ca734 270 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 16 259 1.5E-35 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 NHAM_RS11225 71999b0e4425b8491f8a0328d72ca734 270 Gene3D G3DSA:2.30.30.100 217 259 3.8E-7 T 22-04-2016 NHAM_RS11225 71999b0e4425b8491f8a0328d72ca734 270 SUPERFAMILY SSF50037 217 261 2.61E-7 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal NHAM_RS11225 71999b0e4425b8491f8a0328d72ca734 270 Pfam PF02237 Biotin protein ligase C terminal domain 217 262 4.1E-7 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 NHAM_RS11225 71999b0e4425b8491f8a0328d72ca734 270 SUPERFAMILY SSF55681 11 212 4.47E-44 T 22-04-2016 NHAM_RS11225 71999b0e4425b8491f8a0328d72ca734 270 PANTHER PTHR12835 12 261 2.5E-50 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 NHAM_RS11225 71999b0e4425b8491f8a0328d72ca734 270 Pfam PF03099 Biotin/lipoate A/B protein ligase family 45 154 3.2E-13 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 Pfam PF16193 AAA C-terminal domain 193 268 8.1E-21 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 434 1.1E-67 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 PANTHER PTHR13779:SF7 1 441 3.7E-180 T 22-04-2016 NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 Gene3D G3DSA:3.40.50.300 216 251 2.0E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 SUPERFAMILY SSF52540 24 229 1.46E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 Gene3D G3DSA:1.10.8.60 165 215 1.3E-7 T 22-04-2016 NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 SUPERFAMILY SSF48019 254 439 2.66E-75 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 64 171 3.9E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 Gene3D G3DSA:1.20.272.10 252 348 6.4E-45 T 22-04-2016 NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 Gene3D G3DSA:1.10.3710.10 349 442 9.4E-31 T 22-04-2016 NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 Gene3D G3DSA:3.40.50.300 22 164 3.0E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 PANTHER PTHR13779 1 441 3.7E-180 T 22-04-2016 NHAM_RS08050 3e1e76bbe9a555d5ffba312ed7968611 446 SMART SM00382 59 175 1.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS09630 8090312e72cfef2619f405f940ae1cfd 221 SMART SM00448 1 112 2.1E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS09630 8090312e72cfef2619f405f940ae1cfd 221 SMART SM00862 145 216 6.7E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS09630 8090312e72cfef2619f405f940ae1cfd 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 5.0E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS09630 8090312e72cfef2619f405f940ae1cfd 221 PANTHER PTHR26402 1 218 9.8E-83 T 22-04-2016 NHAM_RS09630 8090312e72cfef2619f405f940ae1cfd 221 Pfam PF00072 Response regulator receiver domain 3 112 5.0E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS09630 8090312e72cfef2619f405f940ae1cfd 221 PANTHER PTHR26402:SF279 1 218 9.8E-83 T 22-04-2016 NHAM_RS09630 8090312e72cfef2619f405f940ae1cfd 221 Gene3D G3DSA:3.40.50.2300 1 123 1.7E-37 T 22-04-2016 NHAM_RS09630 8090312e72cfef2619f405f940ae1cfd 221 SUPERFAMILY SSF52172 1 172 3.42E-40 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS09630 8090312e72cfef2619f405f940ae1cfd 221 Gene3D G3DSA:1.10.10.10 124 216 4.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS17460 cd54d6d1f46c526052871ba82c25e7fb 288 PANTHER PTHR30373:SF2 1 288 9.4E-79 T 22-04-2016 NHAM_RS17460 cd54d6d1f46c526052871ba82c25e7fb 288 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 32 153 3.2E-40 T 22-04-2016 IPR007621 TPM domain NHAM_RS17460 cd54d6d1f46c526052871ba82c25e7fb 288 PANTHER PTHR30373 1 288 9.4E-79 T 22-04-2016 NHAM_RS01740 1a633efd54fd3e4c6b65fe846f9fb3ac 99 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 5 95 2.8E-11 T 22-04-2016 IPR006450 Phage protein of unkonwn function NHAM_RS01740 1a633efd54fd3e4c6b65fe846f9fb3ac 99 Pfam PF05135 Phage gp6-like head-tail connector protein 4 94 2.7E-22 T 22-04-2016 IPR021146 Phage gp6-like head-tail connector protein NHAM_RS17480 bfaa14f0ad98bb57cdb7e04710ce9312 180 Gene3D G3DSA:2.30.110.10 22 175 9.2E-53 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NHAM_RS17480 bfaa14f0ad98bb57cdb7e04710ce9312 180 PANTHER PTHR30466:SF1 21 176 6.5E-44 T 22-04-2016 NHAM_RS17480 bfaa14f0ad98bb57cdb7e04710ce9312 180 Pfam PF01613 Flavin reductase like domain 34 175 2.9E-36 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 NHAM_RS17480 bfaa14f0ad98bb57cdb7e04710ce9312 180 SMART SM00903 33 176 1.1E-52 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 NHAM_RS17480 bfaa14f0ad98bb57cdb7e04710ce9312 180 SUPERFAMILY SSF50475 24 176 5.4E-46 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NHAM_RS17480 bfaa14f0ad98bb57cdb7e04710ce9312 180 PANTHER PTHR30466 21 176 6.5E-44 T 22-04-2016 NHAM_RS02735 3cd184e51388d5cba71e811a7290679e 401 PANTHER PTHR30105 52 399 9.2E-73 T 22-04-2016 NHAM_RS02735 3cd184e51388d5cba71e811a7290679e 401 SUPERFAMILY SSF88713 176 392 1.25E-60 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NHAM_RS02735 3cd184e51388d5cba71e811a7290679e 401 Pfam PF04748 Divergent polysaccharide deacetylase 181 392 8.2E-64 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ NHAM_RS02735 3cd184e51388d5cba71e811a7290679e 401 Gene3D G3DSA:3.20.20.370 171 393 1.3E-68 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS05980 1a8b601540f79195e229fe0f754d6b59 396 PANTHER PTHR11993:SF10 7 391 8.0E-238 T 22-04-2016 NHAM_RS05980 1a8b601540f79195e229fe0f754d6b59 396 Gene3D G3DSA:1.10.645.10 7 388 2.0E-66 T 22-04-2016 IPR029014 NiFe hydrogenase-like NHAM_RS05980 1a8b601540f79195e229fe0f754d6b59 396 PANTHER PTHR11993 7 391 8.0E-238 T 22-04-2016 NHAM_RS05980 1a8b601540f79195e229fe0f754d6b59 396 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 45 56 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 NHAM_RS05980 1a8b601540f79195e229fe0f754d6b59 396 SUPERFAMILY SSF56762 18 396 1.7E-137 T 22-04-2016 IPR029014 NiFe hydrogenase-like NHAM_RS05980 1a8b601540f79195e229fe0f754d6b59 396 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 8 396 3.1E-175 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 NHAM_RS05980 1a8b601540f79195e229fe0f754d6b59 396 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 122 396 2.0E-120 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 NHAM_RS05980 1a8b601540f79195e229fe0f754d6b59 396 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 396 47.742 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 NHAM_RS15080 e9fc9428423f7a03f65059ae4d39394d 515 Gene3D G3DSA:1.10.1280.10 31 303 4.2E-54 T 22-04-2016 IPR008922 Uncharacterised domain, di-copper centre NHAM_RS15080 e9fc9428423f7a03f65059ae4d39394d 515 PRINTS PR00092 Tyrosinase copper-binding domain signature 220 231 1.2E-14 T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS15080 e9fc9428423f7a03f65059ae4d39394d 515 PRINTS PR00092 Tyrosinase copper-binding domain signature 92 109 1.2E-14 T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS15080 e9fc9428423f7a03f65059ae4d39394d 515 PRINTS PR00092 Tyrosinase copper-binding domain signature 123 128 1.2E-14 T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS15080 e9fc9428423f7a03f65059ae4d39394d 515 PRINTS PR00092 Tyrosinase copper-binding domain signature 239 257 1.2E-14 T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS15080 e9fc9428423f7a03f65059ae4d39394d 515 SUPERFAMILY SSF48056 32 304 3.53E-59 T 22-04-2016 IPR008922 Uncharacterised domain, di-copper centre NHAM_RS15080 e9fc9428423f7a03f65059ae4d39394d 515 ProSitePatterns PS00498 Tyrosinase and hemocyanins CuB-binding region signature. 240 251 - T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS15080 e9fc9428423f7a03f65059ae4d39394d 515 ProSitePatterns PS00497 Tyrosinase CuA-binding region signature. 92 109 - T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS15080 e9fc9428423f7a03f65059ae4d39394d 515 Pfam PF00264 Common central domain of tyrosinase 179 258 1.4E-17 T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS15080 e9fc9428423f7a03f65059ae4d39394d 515 Pfam PF00264 Common central domain of tyrosinase 72 136 1.7E-17 T 22-04-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 NHAM_RS15080 e9fc9428423f7a03f65059ae4d39394d 515 PANTHER PTHR11474 55 303 7.2E-36 T 22-04-2016 NHAM_RS15080 e9fc9428423f7a03f65059ae4d39394d 515 Pfam PF12142 Polyphenol oxidase middle domain 263 306 1.3E-10 T 22-04-2016 IPR022739 Polyphenol oxidase, central domain GO:0004097|GO:0055114 KEGG: 00350+1.10.3.1|KEGG: 00950+1.10.3.1|MetaCyc: PWY-6752 NHAM_RS07140 413c704ba2e3f3a849ed592e09cda793 320 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 48 263 3.9E-19 T 22-04-2016 IPR019285 Protein of unknown function DUF2336 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 Pfam PF00141 Peroxidase 393 700 4.7E-38 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 Pfam PF00141 Peroxidase 79 386 3.3E-47 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 19 729 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 Hamap MF_01961 Catalase-peroxidase [katG]. 8 728 41.769 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 250 260 - T 22-04-2016 IPR019793 Peroxidases heam-ligand binding site NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 ProSitePatterns PS00436 Peroxidases active site signature. 87 98 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 Gene3D G3DSA:1.10.420.10 580 701 9.8E-44 T 22-04-2016 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 PRINTS PR00458 Haem peroxidase superfamily signature 147 164 5.9E-21 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 PRINTS PR00458 Haem peroxidase superfamily signature 250 265 5.9E-21 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 PRINTS PR00458 Haem peroxidase superfamily signature 87 101 5.9E-21 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 PRINTS PR00458 Haem peroxidase superfamily signature 309 324 5.9E-21 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 PRINTS PR00458 Haem peroxidase superfamily signature 165 177 5.9E-21 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 SUPERFAMILY SSF48113 19 421 4.86E-152 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 PANTHER PTHR30555 1 729 0.0 T 22-04-2016 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 64 89 2.4E-52 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 471 497 2.4E-52 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 49 62 2.4E-52 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 23 45 2.4E-52 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 258 281 2.4E-52 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 PANTHER PTHR30555:SF0 1 729 0.0 T 22-04-2016 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 Gene3D G3DSA:1.10.520.10 218 241 6.8E-69 T 22-04-2016 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 Gene3D G3DSA:1.10.520.10 44 186 6.8E-69 T 22-04-2016 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 Gene3D G3DSA:1.10.520.10 706 727 3.3E-66 T 22-04-2016 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 Gene3D G3DSA:1.10.520.10 423 579 3.3E-66 T 22-04-2016 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 SUPERFAMILY SSF48113 421 727 1.62E-114 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 Gene3D G3DSA:1.10.420.10 301 398 3.8E-45 T 22-04-2016 NHAM_RS00180 d2446526f8a08841b5cadc7c6f6e592f 729 Gene3D G3DSA:1.10.420.10 242 265 3.8E-45 T 22-04-2016 NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 SUPERFAMILY SSF50615 6 79 5.76E-26 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 PANTHER PTHR15184:SF8 6 475 0.0 T 22-04-2016 NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 8 471 2.9E-249 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 SMART SM00382 146 330 1.5E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 Gene3D G3DSA:1.10.1140.10 356 475 2.7E-56 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 PIRSF PIRSF039072 2 476 8.5E-281 T 22-04-2016 NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 Gene3D G3DSA:3.40.50.300 82 355 1.0E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 Gene3D G3DSA:2.40.10.170 5 79 7.5E-35 T 22-04-2016 NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 SUPERFAMILY SSF47917 356 471 3.66E-53 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 Hamap MF_01347 ATP synthase subunit beta [atpB]. 6 471 57.213 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 134 353 1.6E-62 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 344 353 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 SUPERFAMILY SSF52540 82 359 7.83E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 11 77 4.1E-23 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02755 2346a4e97aead32ccf6bfc36d6ec11a9 476 PANTHER PTHR15184 6 475 0.0 T 22-04-2016 NHAM_RS10185 2b76b0f10b30e83bea3c7b29398f5384 797 SUPERFAMILY SSF158682 514 635 1.96E-16 T 22-04-2016 IPR029024 TerB-like NHAM_RS10185 2b76b0f10b30e83bea3c7b29398f5384 797 Pfam PF13208 TerB N-terminal domain 111 311 2.3E-51 T 22-04-2016 IPR025266 TerB, N-terminal NHAM_RS10185 2b76b0f10b30e83bea3c7b29398f5384 797 Pfam PF15615 TerB-C domain 668 790 3.3E-23 T 22-04-2016 IPR028932 TerB-C domain NHAM_RS10185 2b76b0f10b30e83bea3c7b29398f5384 797 Pfam PF05099 Tellurite resistance protein TerB 521 629 1.3E-9 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal NHAM_RS10185 2b76b0f10b30e83bea3c7b29398f5384 797 Gene3D G3DSA:1.10.3680.10 516 635 1.5E-14 T 22-04-2016 IPR029024 TerB-like NHAM_RS15185 7c454c7457e4f94aa698073a0c581474 86 SUPERFAMILY SSF46689 16 78 5.55E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS15185 7c454c7457e4f94aa698073a0c581474 86 Pfam PF01527 Transposase 16 80 2.3E-18 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NHAM_RS15185 7c454c7457e4f94aa698073a0c581474 86 Gene3D G3DSA:1.10.10.60 22 82 1.9E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS15185 7c454c7457e4f94aa698073a0c581474 86 PANTHER PTHR33609 13 85 1.3E-26 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 SUPERFAMILY SSF56014 638 808 4.06E-49 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PANTHER PTHR22912:SF1 1 423 3.6E-146 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 286 6.7E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 SUPERFAMILY SSF51905 5 197 2.49E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 Gene3D G3DSA:3.50.50.60 6 115 3.6E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 2.1E-11 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 2.1E-11 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 2.1E-11 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 2.1E-11 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 683 699 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 SUPERFAMILY SSF55124 500 630 7.2E-25 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 637 770 2.4E-24 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 Gene3D G3DSA:3.30.413.10 639 772 2.2E-34 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 2.6E-22 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.6E-22 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 2.6E-22 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 2.6E-22 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 2.6E-22 T 22-04-2016 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 Pfam PF04324 BFD-like [2Fe-2S] binding domain 487 537 8.0E-15 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 Pfam PF04324 BFD-like [2Fe-2S] binding domain 426 474 4.2E-11 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PIRSF PIRSF037149 1 816 0.0 T 22-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 Gene3D G3DSA:3.50.50.60 116 310 9.6E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 SUPERFAMILY SSF51905 152 309 4.49E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PRINTS PR00397 Sirohaem Fe-binding site signature 640 658 2.1E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PRINTS PR00397 Sirohaem Fe-binding site signature 683 701 2.1E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 11 800 4.1E-281 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 627 1.2E-12 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS15200 de4de13a09236c7e2bfc2f3f013e0b26 817 PANTHER PTHR22912 1 423 3.6E-146 T 22-04-2016 NHAM_RS00135 304247ca4c15ffaf2c87780839f116c7 263 Gene3D G3DSA:2.30.30.180 110 175 6.2E-11 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal NHAM_RS00135 304247ca4c15ffaf2c87780839f116c7 263 SUPERFAMILY SSF75420 21 104 4.18E-20 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal NHAM_RS00135 304247ca4c15ffaf2c87780839f116c7 263 PANTHER PTHR33867:SF1 21 238 4.9E-40 T 22-04-2016 NHAM_RS00135 304247ca4c15ffaf2c87780839f116c7 263 Gene3D G3DSA:3.30.300.70 25 101 3.5E-23 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal NHAM_RS00135 304247ca4c15ffaf2c87780839f116c7 263 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 27 178 21.69 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 NHAM_RS00135 304247ca4c15ffaf2c87780839f116c7 263 SUPERFAMILY SSF74942 105 179 4.18E-15 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal NHAM_RS00135 304247ca4c15ffaf2c87780839f116c7 263 PANTHER PTHR33867 21 238 4.9E-40 T 22-04-2016 NHAM_RS00135 304247ca4c15ffaf2c87780839f116c7 263 Pfam PF02576 Putative ribosome maturation factor RimP 33 174 9.1E-40 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 NHAM_RS16515 0c50a6d39183b9d15727bc469a439c0f 187 Gene3D G3DSA:3.40.980.10 5 161 7.9E-53 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16515 0c50a6d39183b9d15727bc469a439c0f 187 Pfam PF00994 Probable molybdopterin binding domain 16 158 1.0E-39 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16515 0c50a6d39183b9d15727bc469a439c0f 187 SMART SM00852 16 160 1.8E-38 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16515 0c50a6d39183b9d15727bc469a439c0f 187 PANTHER PTHR10192 6 168 1.2E-80 T 22-04-2016 NHAM_RS16515 0c50a6d39183b9d15727bc469a439c0f 187 PIRSF PIRSF006443 1 168 7.1E-64 T 22-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 NHAM_RS16515 0c50a6d39183b9d15727bc469a439c0f 187 SUPERFAMILY SSF53218 6 171 1.31E-49 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16515 0c50a6d39183b9d15727bc469a439c0f 187 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 74 87 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 NHAM_RS16515 0c50a6d39183b9d15727bc469a439c0f 187 PANTHER PTHR10192:SF18 6 168 1.2E-80 T 22-04-2016 NHAM_RS16515 0c50a6d39183b9d15727bc469a439c0f 187 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 9 171 1.2E-79 T 22-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 NHAM_RS16515 0c50a6d39183b9d15727bc469a439c0f 187 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 154 3.7E-38 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS20055 db866c24facc7ea0d9e43ea2ffa94030 386 Pfam PF03631 Virulence factor BrkB 93 345 6.0E-64 T 22-04-2016 IPR017039 Virulence factor BrkB NHAM_RS20055 db866c24facc7ea0d9e43ea2ffa94030 386 PANTHER PTHR30213 53 372 5.0E-119 T 22-04-2016 NHAM_RS20055 db866c24facc7ea0d9e43ea2ffa94030 386 PANTHER PTHR30213:SF2 53 372 5.0E-119 T 22-04-2016 NHAM_RS20055 db866c24facc7ea0d9e43ea2ffa94030 386 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 86 343 6.7E-31 T 22-04-2016 IPR017039 Virulence factor BrkB NHAM_RS17340 7e181ab3288e62cfec5f1c5ae7e659d1 259 SUPERFAMILY SSF56655 3 256 3.14E-63 T 22-04-2016 NHAM_RS17340 7e181ab3288e62cfec5f1c5ae7e659d1 259 PANTHER PTHR20854:SF5 1 246 4.5E-60 T 22-04-2016 NHAM_RS17340 7e181ab3288e62cfec5f1c5ae7e659d1 259 PANTHER PTHR20854 1 246 4.5E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS17340 7e181ab3288e62cfec5f1c5ae7e659d1 259 Gene3D G3DSA:3.30.540.10 2 139 1.0E-33 T 22-04-2016 NHAM_RS17340 7e181ab3288e62cfec5f1c5ae7e659d1 259 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 NHAM_RS17340 7e181ab3288e62cfec5f1c5ae7e659d1 259 Gene3D G3DSA:3.40.190.80 156 255 3.0E-33 T 22-04-2016 NHAM_RS17340 7e181ab3288e62cfec5f1c5ae7e659d1 259 Pfam PF00459 Inositol monophosphatase family 3 235 2.3E-43 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS18500 e1b3704d01d1851542329c386399c8b0 204 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 9 204 4.1E-82 T 22-04-2016 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent NHAM_RS18500 e1b3704d01d1851542329c386399c8b0 204 SUPERFAMILY SSF50475 28 175 2.55E-27 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NHAM_RS18500 e1b3704d01d1851542329c386399c8b0 204 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 30 123 2.8E-17 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NHAM_RS18500 e1b3704d01d1851542329c386399c8b0 204 PANTHER PTHR30212:SF4 1 204 1.5E-89 T 22-04-2016 NHAM_RS18500 e1b3704d01d1851542329c386399c8b0 204 PANTHER PTHR30212 1 204 1.5E-89 T 22-04-2016 NHAM_RS18500 e1b3704d01d1851542329c386399c8b0 204 Gene3D G3DSA:2.30.110.10 26 147 5.4E-23 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NHAM_RS14985 01196b1b741040ce5986dd008400ab83 266 Pfam PF12860 PAS fold 123 237 2.0E-22 T 22-04-2016 NHAM_RS14985 01196b1b741040ce5986dd008400ab83 266 SUPERFAMILY SSF55785 110 223 7.04E-9 T 22-04-2016 IPR000014 PAS domain NHAM_RS14985 01196b1b741040ce5986dd008400ab83 266 Gene3D G3DSA:3.30.450.20 111 233 1.6E-10 T 22-04-2016 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 SUPERFAMILY SSF51645 2 717 1.57E-287 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 Pfam PF01274 Malate synthase 17 684 4.7E-176 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 3 717 0.0 T 22-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 Gene3D G3DSA:1.20.1220.12 587 720 1.3E-71 T 22-04-2016 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 PANTHER PTHR21631:SF7 498 718 7.9E-139 T 22-04-2016 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 PANTHER PTHR21631:SF7 1 9 7.9E-139 T 22-04-2016 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 Gene3D G3DSA:1.10.1860.10 2 87 1.2E-34 T 22-04-2016 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 PANTHER PTHR21631 498 718 7.9E-139 T 22-04-2016 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 PANTHER PTHR21631 1 9 7.9E-139 T 22-04-2016 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 Gene3D G3DSA:3.20.20.360 333 582 1.5E-143 T 22-04-2016 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 Gene3D G3DSA:3.20.20.360 263 293 1.5E-143 T 22-04-2016 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 Gene3D G3DSA:3.20.20.360 88 134 1.5E-143 T 22-04-2016 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 Gene3D G3DSA:2.170.170.11 135 261 2.5E-67 T 22-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 Gene3D G3DSA:2.170.170.11 295 332 2.5E-67 T 22-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 NHAM_RS18290 8b3a031d7404471ed62de3822640b697 727 Hamap MF_00641 Malate synthase G [glcB]. 1 727 391.572 T 22-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 NHAM_RS05020 820ef124c23a17de9526a488045e673b 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 123 143 5.1E-6 T 22-04-2016 NHAM_RS05020 820ef124c23a17de9526a488045e673b 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 347 367 5.1E-6 T 22-04-2016 NHAM_RS05020 820ef124c23a17de9526a488045e673b 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 32 56 5.1E-6 T 22-04-2016 NHAM_RS05020 820ef124c23a17de9526a488045e673b 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 153 177 5.1E-6 T 22-04-2016 NHAM_RS05020 820ef124c23a17de9526a488045e673b 468 Gene3D G3DSA:1.20.1250.20 280 456 4.5E-16 T 22-04-2016 NHAM_RS05020 820ef124c23a17de9526a488045e673b 468 Gene3D G3DSA:1.20.1250.20 28 202 2.6E-29 T 22-04-2016 NHAM_RS05020 820ef124c23a17de9526a488045e673b 468 Pfam PF07690 Major Facilitator Superfamily 34 425 2.0E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS05020 820ef124c23a17de9526a488045e673b 468 PANTHER PTHR23501 20 467 2.4E-101 T 22-04-2016 NHAM_RS05020 820ef124c23a17de9526a488045e673b 468 SUPERFAMILY SSF103473 21 208 1.1E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS05020 820ef124c23a17de9526a488045e673b 468 SUPERFAMILY SSF103473 263 457 1.1E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS05020 820ef124c23a17de9526a488045e673b 468 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 31 432 4.4E-71 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NHAM_RS17860 af36c68edada4b330fe137733c05d7ba 314 Gene3D G3DSA:3.40.50.1220 184 309 9.9E-60 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NHAM_RS17860 af36c68edada4b330fe137733c05d7ba 314 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 272 3.7E-35 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal NHAM_RS17860 af36c68edada4b330fe137733c05d7ba 314 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site NHAM_RS17860 af36c68edada4b330fe137733c05d7ba 314 SMART SM00893 3 181 1.1E-54 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 NHAM_RS17860 af36c68edada4b330fe137733c05d7ba 314 PANTHER PTHR10909 104 308 3.2E-122 T 22-04-2016 NHAM_RS17860 af36c68edada4b330fe137733c05d7ba 314 PANTHER PTHR10909:SF294 104 308 3.2E-122 T 22-04-2016 NHAM_RS17860 af36c68edada4b330fe137733c05d7ba 314 Gene3D G3DSA:3.40.50.620 1 180 5.1E-56 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS17860 af36c68edada4b330fe137733c05d7ba 314 SUPERFAMILY SSF52402 3 182 5.69E-52 T 22-04-2016 NHAM_RS17860 af36c68edada4b330fe137733c05d7ba 314 SUPERFAMILY SSF52467 188 309 1.35E-46 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NHAM_RS17860 af36c68edada4b330fe137733c05d7ba 314 Pfam PF01012 Electron transfer flavoprotein domain 3 170 1.6E-35 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 NHAM_RS17860 af36c68edada4b330fe137733c05d7ba 314 PIRSF PIRSF000089 1 313 2.4E-103 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 NHAM_RS12955 85fb102b1fe4ce34752c9ed76146790d 228 Pfam PF00027 Cyclic nucleotide-binding domain 28 110 1.3E-19 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS12955 85fb102b1fe4ce34752c9ed76146790d 228 Gene3D G3DSA:1.10.10.10 142 203 7.1E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS12955 85fb102b1fe4ce34752c9ed76146790d 228 PANTHER PTHR24567 9 202 1.2E-47 T 22-04-2016 NHAM_RS12955 85fb102b1fe4ce34752c9ed76146790d 228 SUPERFAMILY SSF51206 14 135 3.67E-27 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like NHAM_RS12955 85fb102b1fe4ce34752c9ed76146790d 228 SMART SM00100 5 124 2.5E-14 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS12955 85fb102b1fe4ce34752c9ed76146790d 228 Gene3D G3DSA:2.60.120.10 27 136 8.9E-26 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS12955 85fb102b1fe4ce34752c9ed76146790d 228 Pfam PF13545 Crp-like helix-turn-helix domain 145 206 2.6E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS12955 85fb102b1fe4ce34752c9ed76146790d 228 SUPERFAMILY SSF46785 142 203 5.14E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS12955 85fb102b1fe4ce34752c9ed76146790d 228 PANTHER PTHR24567:SF37 9 202 1.2E-47 T 22-04-2016 NHAM_RS11865 d9e662c1ae0003194fdc39c31b0682ab 384 SUPERFAMILY SSF53383 4 369 1.97E-91 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS11865 d9e662c1ae0003194fdc39c31b0682ab 384 PANTHER PTHR11601:SF20 2 364 7.8E-126 T 22-04-2016 NHAM_RS11865 d9e662c1ae0003194fdc39c31b0682ab 384 PIRSF PIRSF005572 2 376 2.5E-126 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 NHAM_RS11865 d9e662c1ae0003194fdc39c31b0682ab 384 Gene3D G3DSA:3.90.1150.10 244 368 4.5E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS11865 d9e662c1ae0003194fdc39c31b0682ab 384 Pfam PF00266 Aminotransferase class-V 5 361 6.3E-62 T 22-04-2016 IPR000192 Aminotransferase class V domain NHAM_RS11865 d9e662c1ae0003194fdc39c31b0682ab 384 PANTHER PTHR11601 2 364 7.8E-126 T 22-04-2016 NHAM_RS11865 d9e662c1ae0003194fdc39c31b0682ab 384 Gene3D G3DSA:3.40.640.10 17 243 5.2E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS16255 4b41eb8406f8257820d760d2397d39fd 184 PANTHER PTHR18895:SF60 1 152 2.2E-28 T 22-04-2016 NHAM_RS16255 4b41eb8406f8257820d760d2397d39fd 184 Pfam PF03602 Conserved hypothetical protein 95 1 181 1.0E-49 T 22-04-2016 NHAM_RS16255 4b41eb8406f8257820d760d2397d39fd 184 Gene3D G3DSA:3.40.50.150 1 182 5.3E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS16255 4b41eb8406f8257820d760d2397d39fd 184 PANTHER PTHR18895 1 152 2.2E-28 T 22-04-2016 NHAM_RS16255 4b41eb8406f8257820d760d2397d39fd 184 SUPERFAMILY SSF53335 1 181 3.6E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS16255 4b41eb8406f8257820d760d2397d39fd 184 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NHAM_RS16255 4b41eb8406f8257820d760d2397d39fd 184 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 182 3.3E-40 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS16255 4b41eb8406f8257820d760d2397d39fd 184 PIRSF PIRSF004553 1 184 1.2E-47 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS02585 bbc5e57659ca061147454b47016b9668 635 PIRSF PIRSF031715 7 624 6.0E-279 T 22-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 NHAM_RS02585 bbc5e57659ca061147454b47016b9668 635 Gene3D G3DSA:3.40.50.410 414 591 2.2E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A NHAM_RS02585 bbc5e57659ca061147454b47016b9668 635 SMART SM00327 411 616 5.1E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A NHAM_RS02585 bbc5e57659ca061147454b47016b9668 635 Pfam PF06213 Cobalamin biosynthesis protein CobT 16 283 1.2E-98 T 22-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 NHAM_RS02585 bbc5e57659ca061147454b47016b9668 635 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 20 618 2.2E-289 T 22-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 NHAM_RS02585 bbc5e57659ca061147454b47016b9668 635 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 400 618 3.2E-121 T 22-04-2016 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 NHAM_RS02585 bbc5e57659ca061147454b47016b9668 635 SUPERFAMILY SSF53300 414 608 4.45E-16 T 22-04-2016 IPR002035 von Willebrand factor, type A NHAM_RS11840 848c9730b94f7e65fe3bca1eb5b2c217 126 Pfam PF01883 Domain of unknown function DUF59 33 104 5.8E-20 T 22-04-2016 IPR002744 Domain of unknown function DUF59 NHAM_RS11840 848c9730b94f7e65fe3bca1eb5b2c217 126 PANTHER PTHR13696 24 124 3.9E-21 T 22-04-2016 NHAM_RS11840 848c9730b94f7e65fe3bca1eb5b2c217 126 SUPERFAMILY SSF117916 33 124 9.81E-29 T 22-04-2016 NHAM_RS11840 848c9730b94f7e65fe3bca1eb5b2c217 126 TIGRFAM TIGR02945 SUF_assoc: FeS assembly SUF system protein 31 126 6.6E-44 T 22-04-2016 IPR014291 SUF system FeS cluster assembly associated NHAM_RS11840 848c9730b94f7e65fe3bca1eb5b2c217 126 PANTHER PTHR13696:SF62 24 124 3.9E-21 T 22-04-2016 NHAM_RS19245 d84c7a2703ce9c1df2b9b683302ceb49 290 PRINTS PR00478 Phosphoribulokinase family signature 127 145 8.8E-38 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 NHAM_RS19245 d84c7a2703ce9c1df2b9b683302ceb49 290 PRINTS PR00478 Phosphoribulokinase family signature 183 206 8.8E-38 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 NHAM_RS19245 d84c7a2703ce9c1df2b9b683302ceb49 290 PRINTS PR00478 Phosphoribulokinase family signature 12 29 8.8E-38 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 NHAM_RS19245 d84c7a2703ce9c1df2b9b683302ceb49 290 PRINTS PR00478 Phosphoribulokinase family signature 165 182 8.8E-38 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 NHAM_RS19245 d84c7a2703ce9c1df2b9b683302ceb49 290 PANTHER PTHR10285:SF72 1 289 3.5E-130 T 22-04-2016 NHAM_RS19245 d84c7a2703ce9c1df2b9b683302ceb49 290 Gene3D G3DSA:3.40.50.300 2 288 1.3E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19245 d84c7a2703ce9c1df2b9b683302ceb49 290 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 215 1.0E-84 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 NHAM_RS19245 d84c7a2703ce9c1df2b9b683302ceb49 290 PANTHER PTHR10285 1 289 3.5E-130 T 22-04-2016 NHAM_RS19245 d84c7a2703ce9c1df2b9b683302ceb49 290 ProSitePatterns PS00567 Phosphoribulokinase signature. 165 178 - T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 NHAM_RS19245 d84c7a2703ce9c1df2b9b683302ceb49 290 SUPERFAMILY SSF52540 3 287 1.11E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11685 2d9dc915811c899bb0cc39345d485efa 504 Gene3D G3DSA:3.40.50.2020 290 457 5.0E-43 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS11685 2d9dc915811c899bb0cc39345d485efa 504 PANTHER PTHR11907:SF0 28 494 1.9E-220 T 22-04-2016 NHAM_RS11685 2d9dc915811c899bb0cc39345d485efa 504 PANTHER PTHR11907 28 494 1.9E-220 T 22-04-2016 NHAM_RS11685 2d9dc915811c899bb0cc39345d485efa 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 30 482 46.079 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 NHAM_RS11685 2d9dc915811c899bb0cc39345d485efa 504 Pfam PF00156 Phosphoribosyl transferase domain 298 405 3.8E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NHAM_RS11685 2d9dc915811c899bb0cc39345d485efa 504 Gene3D G3DSA:3.60.20.10 31 277 3.9E-62 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NHAM_RS11685 2d9dc915811c899bb0cc39345d485efa 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 31 481 6.0E-149 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 NHAM_RS11685 2d9dc915811c899bb0cc39345d485efa 504 PIRSF PIRSF000485 27 494 6.2E-162 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 NHAM_RS11685 2d9dc915811c899bb0cc39345d485efa 504 Pfam PF13537 Glutamine amidotransferase domain 113 228 3.5E-18 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain NHAM_RS11685 2d9dc915811c899bb0cc39345d485efa 504 SUPERFAMILY SSF53271 269 488 1.56E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS11685 2d9dc915811c899bb0cc39345d485efa 504 SUPERFAMILY SSF56235 31 250 5.4E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NHAM_RS00290 93040f6fd2ae3fd5f9751957d613b912 106 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 104 2.0E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NHAM_RS00290 93040f6fd2ae3fd5f9751957d613b912 106 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NHAM_RS00290 93040f6fd2ae3fd5f9751957d613b912 106 Gene3D G3DSA:3.40.30.10 3 104 4.4E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00290 93040f6fd2ae3fd5f9751957d613b912 106 PRINTS PR00421 Thioredoxin family signature 30 39 3.4E-9 T 22-04-2016 NHAM_RS00290 93040f6fd2ae3fd5f9751957d613b912 106 PRINTS PR00421 Thioredoxin family signature 70 81 3.4E-9 T 22-04-2016 NHAM_RS00290 93040f6fd2ae3fd5f9751957d613b912 106 PRINTS PR00421 Thioredoxin family signature 22 30 3.4E-9 T 22-04-2016 NHAM_RS00290 93040f6fd2ae3fd5f9751957d613b912 106 PIRSF PIRSF000077 1 106 3.1E-43 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NHAM_RS00290 93040f6fd2ae3fd5f9751957d613b912 106 Pfam PF00085 Thioredoxin 4 104 3.1E-33 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 NHAM_RS00290 93040f6fd2ae3fd5f9751957d613b912 106 PANTHER PTHR10438 6 98 8.0E-40 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NHAM_RS00290 93040f6fd2ae3fd5f9751957d613b912 106 SUPERFAMILY SSF52833 5 104 2.65E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00290 93040f6fd2ae3fd5f9751957d613b912 106 PANTHER PTHR10438:SF256 6 98 8.0E-40 T 22-04-2016 NHAM_RS20115 df56b5d6a432959056ab370b85a640b0 287 PANTHER PTHR30050 1 251 8.7E-114 T 22-04-2016 NHAM_RS20115 df56b5d6a432959056ab370b85a640b0 287 SUPERFAMILY SSF52540 87 231 8.42E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS20115 df56b5d6a432959056ab370b85a640b0 287 Gene3D G3DSA:3.40.50.300 94 230 1.5E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS20115 df56b5d6a432959056ab370b85a640b0 287 PANTHER PTHR30050:SF6 1 251 8.7E-114 T 22-04-2016 NHAM_RS20115 df56b5d6a432959056ab370b85a640b0 287 PIRSF PIRSF003073 1 251 3.7E-72 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein NHAM_RS20115 df56b5d6a432959056ab370b85a640b0 287 SMART SM00382 97 233 9.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS20115 df56b5d6a432959056ab370b85a640b0 287 Pfam PF01695 IstB-like ATP binding protein 54 229 9.1E-59 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 NHAM_RS06720 d7e804ed6eb3931a7ae8dd807553ced5 293 PANTHER PTHR36698:SF2 2 272 1.7E-85 T 22-04-2016 NHAM_RS06720 d7e804ed6eb3931a7ae8dd807553ced5 293 Pfam PF02470 MlaD protein 47 113 4.4E-10 T 22-04-2016 IPR003399 Mce/MlaD NHAM_RS06720 d7e804ed6eb3931a7ae8dd807553ced5 293 PANTHER PTHR36698 2 272 1.7E-85 T 22-04-2016 NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 Gene3D G3DSA:3.90.420.10 46 272 9.3E-70 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 PRINTS PR00407 Eukaryotic molybdopterin domain signature 287 299 8.5E-14 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 PRINTS PR00407 Eukaryotic molybdopterin domain signature 75 91 8.5E-14 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 PRINTS PR00407 Eukaryotic molybdopterin domain signature 206 222 8.5E-14 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 PRINTS PR00407 Eukaryotic molybdopterin domain signature 223 236 8.5E-14 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 PRINTS PR00407 Eukaryotic molybdopterin domain signature 325 337 8.5E-14 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 PRINTS PR00407 Eukaryotic molybdopterin domain signature 153 168 8.5E-14 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 SUPERFAMILY SSF81296 290 400 2.24E-30 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 SUPERFAMILY SSF56524 52 319 2.09E-70 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 Gene3D G3DSA:2.60.40.650 290 400 9.1E-27 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 Pfam PF00174 Oxidoreductase molybdopterin binding domain 92 260 3.2E-49 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 PANTHER PTHR19372 39 399 7.9E-94 T 22-04-2016 NHAM_RS17425 75a0ca63c36f8891765cfcfec3352e2f 402 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 287 399 4.1E-13 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 NHAM_RS02140 f941529d618178cf74e66463cf2a3181 222 PIRSF PIRSF002764 1 222 5.5E-71 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria NHAM_RS02140 f941529d618178cf74e66463cf2a3181 222 Pfam PF03379 CcmB protein 5 219 4.2E-83 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02140 f941529d618178cf74e66463cf2a3181 222 PANTHER PTHR30070:SF1 1 222 1.6E-58 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02140 f941529d618178cf74e66463cf2a3181 222 PANTHER PTHR30070 1 222 1.6E-58 T 22-04-2016 NHAM_RS02140 f941529d618178cf74e66463cf2a3181 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 3.5E-65 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02140 f941529d618178cf74e66463cf2a3181 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 3.5E-65 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02140 f941529d618178cf74e66463cf2a3181 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 157 176 3.5E-65 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02140 f941529d618178cf74e66463cf2a3181 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 3.5E-65 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02140 f941529d618178cf74e66463cf2a3181 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 3.5E-65 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02140 f941529d618178cf74e66463cf2a3181 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 3.5E-65 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02140 f941529d618178cf74e66463cf2a3181 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 7 218 3.4E-85 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 SUPERFAMILY SSF82693 43 138 9.59E-16 T 22-04-2016 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 SUPERFAMILY SSF82866 792 1015 4.19E-42 T 22-04-2016 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 Gene3D G3DSA:3.30.70.1430 43 146 2.6E-18 T 22-04-2016 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 SUPERFAMILY SSF82714 188 267 1.44E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 PANTHER PTHR32063:SF18 3 1013 0.0 T 22-04-2016 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 SUPERFAMILY SSF82714 709 794 4.05E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 Gene3D G3DSA:3.30.2090.10 188 268 1.7E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 Gene3D G3DSA:3.30.2090.10 708 794 9.8E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 Pfam PF00873 AcrB/AcrD/AcrF family 8 1010 2.5E-160 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 Gene3D G3DSA:1.10.3850.10 801 1014 2.8E-49 T 22-04-2016 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 Gene3D G3DSA:1.10.3850.10 277 488 1.4E-43 T 22-04-2016 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 PANTHER PTHR32063 3 1013 0.0 T 22-04-2016 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 2.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 2.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 2.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 2.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 2.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 2.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 SUPERFAMILY SSF82866 293 491 2.22E-36 T 22-04-2016 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 SUPERFAMILY SSF82693 271 326 1.22E-18 T 22-04-2016 NHAM_RS05515 03a8b6aa5618c793dcafdf321d4e029c 1044 SUPERFAMILY SSF82693 141 185 1.22E-18 T 22-04-2016 NHAM_RS09060 1ebce60ede8edad7fe042ae334b4bc3d 325 Gene3D G3DSA:3.40.50.1100 55 152 2.2E-34 T 22-04-2016 NHAM_RS09060 1ebce60ede8edad7fe042ae334b4bc3d 325 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 50 68 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 NHAM_RS09060 1ebce60ede8edad7fe042ae334b4bc3d 325 SUPERFAMILY SSF53686 18 322 1.26E-95 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS09060 1ebce60ede8edad7fe042ae334b4bc3d 325 Gene3D G3DSA:3.40.50.1100 153 323 8.3E-74 T 22-04-2016 NHAM_RS09060 1ebce60ede8edad7fe042ae334b4bc3d 325 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 309 1.8E-65 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS09060 1ebce60ede8edad7fe042ae334b4bc3d 325 PANTHER PTHR10314 15 325 4.3E-151 T 22-04-2016 NHAM_RS09060 1ebce60ede8edad7fe042ae334b4bc3d 325 TIGRFAM TIGR01136 cysKM: cysteine synthase 23 322 3.1E-125 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 NHAM_RS09060 1ebce60ede8edad7fe042ae334b4bc3d 325 PANTHER PTHR10314:SF110 15 325 4.3E-151 T 22-04-2016 NHAM_RS09060 1ebce60ede8edad7fe042ae334b4bc3d 325 TIGRFAM TIGR01139 cysK: cysteine synthase A 23 322 1.0E-127 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 NHAM_RS03770 58430c0a50932bb02a2556d25b60602e 575 PANTHER PTHR34597 79 507 3.9E-45 T 22-04-2016 NHAM_RS03770 58430c0a50932bb02a2556d25b60602e 575 Pfam PF08479 POTRA domain, ShlB-type 79 152 7.4E-22 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type NHAM_RS03770 58430c0a50932bb02a2556d25b60602e 575 Gene3D G3DSA:3.10.20.310 74 152 7.1E-17 T 22-04-2016 NHAM_RS03770 58430c0a50932bb02a2556d25b60602e 575 PANTHER PTHR34597:SF1 79 507 3.9E-45 T 22-04-2016 NHAM_RS03770 58430c0a50932bb02a2556d25b60602e 575 Gene3D G3DSA:2.40.160.50 189 556 4.0E-38 T 22-04-2016 NHAM_RS10540 684d15bf0c71ac8e2b03cb91ab80aa39 344 SMART SM00062 40 269 2.0E-56 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NHAM_RS10540 684d15bf0c71ac8e2b03cb91ab80aa39 344 Gene3D G3DSA:3.40.190.10 38 136 3.7E-16 T 22-04-2016 NHAM_RS10540 684d15bf0c71ac8e2b03cb91ab80aa39 344 PANTHER PTHR30085:SF5 1 313 2.3E-181 T 22-04-2016 NHAM_RS10540 684d15bf0c71ac8e2b03cb91ab80aa39 344 PANTHER PTHR30085 1 313 2.3E-181 T 22-04-2016 NHAM_RS10540 684d15bf0c71ac8e2b03cb91ab80aa39 344 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 63 76 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 NHAM_RS10540 684d15bf0c71ac8e2b03cb91ab80aa39 344 SUPERFAMILY SSF53850 31 264 1.4E-50 T 22-04-2016 NHAM_RS10540 684d15bf0c71ac8e2b03cb91ab80aa39 344 Gene3D G3DSA:3.40.190.10 137 228 8.9E-13 T 22-04-2016 NHAM_RS10540 684d15bf0c71ac8e2b03cb91ab80aa39 344 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 259 1.8E-31 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NHAM_RS19960 e655e83c601e84cbe254573ce7af785b 364 PANTHER PTHR30347:SF1 5 355 1.4E-98 T 22-04-2016 NHAM_RS19960 e655e83c601e84cbe254573ce7af785b 364 Gene3D G3DSA:3.30.420.10 206 335 6.1E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS19960 e655e83c601e84cbe254573ce7af785b 364 Pfam PF13565 Homeodomain-like domain 64 136 3.7E-10 T 22-04-2016 NHAM_RS19960 e655e83c601e84cbe254573ce7af785b 364 Pfam PF13358 DDE superfamily endonuclease 177 322 7.6E-21 T 22-04-2016 NHAM_RS19960 e655e83c601e84cbe254573ce7af785b 364 SUPERFAMILY SSF46689 29 140 4.84E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS19960 e655e83c601e84cbe254573ce7af785b 364 PANTHER PTHR30347 5 355 1.4E-98 T 22-04-2016 NHAM_RS10915 c576ef507e2d02dca26aadef1377694a 149 PANTHER PTHR10374:SF8 1 145 1.6E-41 T 22-04-2016 NHAM_RS10915 c576ef507e2d02dca26aadef1377694a 149 SUPERFAMILY SSF54593 1 133 1.48E-29 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS10915 c576ef507e2d02dca26aadef1377694a 149 PANTHER PTHR10374 1 145 1.6E-41 T 22-04-2016 NHAM_RS10915 c576ef507e2d02dca26aadef1377694a 149 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 NHAM_RS10915 c576ef507e2d02dca26aadef1377694a 149 Gene3D G3DSA:3.10.180.10 2 132 3.8E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS10915 c576ef507e2d02dca26aadef1377694a 149 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 112 1.2E-13 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NHAM_RS01900 8eb950d01c0bb258e10cb068d3f44b51 304 SUPERFAMILY SSF51730 14 297 5.49E-96 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like NHAM_RS01900 8eb950d01c0bb258e10cb068d3f44b51 304 Pfam PF02219 Methylenetetrahydrofolate reductase 14 294 2.2E-94 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 NHAM_RS01900 8eb950d01c0bb258e10cb068d3f44b51 304 PANTHER PTHR21091 152 240 2.0E-32 T 22-04-2016 NHAM_RS01900 8eb950d01c0bb258e10cb068d3f44b51 304 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 20 293 2.3E-103 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 NHAM_RS01900 8eb950d01c0bb258e10cb068d3f44b51 304 Gene3D G3DSA:3.20.20.220 14 300 5.4E-102 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like NHAM_RS15295 2bddd44421ef90b18e500c1981babf3b 304 PANTHER PTHR10342 28 221 3.3E-83 T 22-04-2016 NHAM_RS15295 2bddd44421ef90b18e500c1981babf3b 304 PANTHER PTHR10342 246 296 3.3E-83 T 22-04-2016 NHAM_RS15295 2bddd44421ef90b18e500c1981babf3b 304 SUPERFAMILY SSF53649 62 304 2.62E-53 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NHAM_RS15295 2bddd44421ef90b18e500c1981babf3b 304 PANTHER PTHR10342:SF241 28 221 3.3E-83 T 22-04-2016 NHAM_RS15295 2bddd44421ef90b18e500c1981babf3b 304 PANTHER PTHR10342:SF241 246 296 3.3E-83 T 22-04-2016 NHAM_RS15295 2bddd44421ef90b18e500c1981babf3b 304 Gene3D G3DSA:3.40.720.10 64 304 5.0E-47 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NHAM_RS15295 2bddd44421ef90b18e500c1981babf3b 304 Pfam PF00884 Sulfatase 66 294 1.7E-26 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NHAM_RS13340 93fbbf5669028b9a8161426f99e44c11 161 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 60 2.3E-6 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS13340 93fbbf5669028b9a8161426f99e44c11 161 SUPERFAMILY SSF54292 2 79 5.9E-24 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS13340 93fbbf5669028b9a8161426f99e44c11 161 Gene3D G3DSA:1.10.150.120 76 156 3.9E-31 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NHAM_RS13340 93fbbf5669028b9a8161426f99e44c11 161 PANTHER PTHR11908 1 146 1.5E-39 T 22-04-2016 NHAM_RS13340 93fbbf5669028b9a8161426f99e44c11 161 SUPERFAMILY SSF47741 86 153 4.06E-29 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NHAM_RS13340 93fbbf5669028b9a8161426f99e44c11 161 Pfam PF01799 [2Fe-2S] binding domain 74 148 8.6E-29 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NHAM_RS13340 93fbbf5669028b9a8161426f99e44c11 161 Gene3D G3DSA:3.10.20.30 2 75 6.8E-29 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS13340 93fbbf5669028b9a8161426f99e44c11 161 PANTHER PTHR11908:SF66 1 146 1.5E-39 T 22-04-2016 NHAM_RS00125 d1073de3662aef1d784843e0aa89039e 139 PANTHER PTHR10245 1 76 2.1E-41 T 22-04-2016 NHAM_RS00125 d1073de3662aef1d784843e0aa89039e 139 Pfam PF01381 Helix-turn-helix 18 71 2.8E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS00125 d1073de3662aef1d784843e0aa89039e 139 PANTHER PTHR10245:SF38 1 76 2.1E-41 T 22-04-2016 NHAM_RS00125 d1073de3662aef1d784843e0aa89039e 139 SMART SM00530 16 71 8.5E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS00125 d1073de3662aef1d784843e0aa89039e 139 SUPERFAMILY SSF47413 2 78 1.2E-28 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS00125 d1073de3662aef1d784843e0aa89039e 139 Gene3D G3DSA:1.10.260.40 13 76 2.0E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS20345 ebf22f700be3d413125ac1b4def31ad4 409 PANTHER PTHR11271 19 402 1.3E-60 T 22-04-2016 NHAM_RS20345 ebf22f700be3d413125ac1b4def31ad4 409 Gene3D G3DSA:3.20.20.140 60 350 2.3E-67 T 22-04-2016 NHAM_RS20345 ebf22f700be3d413125ac1b4def31ad4 409 PANTHER PTHR11271:SF33 19 402 1.3E-60 T 22-04-2016 NHAM_RS20345 ebf22f700be3d413125ac1b4def31ad4 409 SUPERFAMILY SSF51556 58 363 5.04E-74 T 22-04-2016 IPR032466 Metal-dependent hydrolase NHAM_RS20345 ebf22f700be3d413125ac1b4def31ad4 409 Gene3D G3DSA:2.30.40.10 351 370 1.3E-4 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NHAM_RS20345 ebf22f700be3d413125ac1b4def31ad4 409 SUPERFAMILY SSF51338 363 400 1.73E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NHAM_RS20345 ebf22f700be3d413125ac1b4def31ad4 409 SUPERFAMILY SSF51338 3 58 1.73E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NHAM_RS20345 ebf22f700be3d413125ac1b4def31ad4 409 Pfam PF01979 Amidohydrolase family 54 399 5.8E-33 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NHAM_RS20345 ebf22f700be3d413125ac1b4def31ad4 409 Gene3D G3DSA:2.30.40.10 2 59 1.7E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NHAM_RS20345 ebf22f700be3d413125ac1b4def31ad4 409 Gene3D G3DSA:2.30.40.10 371 402 1.7E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NHAM_RS04045 1bfd9d01dc90ba003398f57e794b2101 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 269 4.4E-14 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NHAM_RS04045 1bfd9d01dc90ba003398f57e794b2101 594 Gene3D G3DSA:1.20.140.10 271 456 6.0E-54 T 22-04-2016 NHAM_RS04045 1bfd9d01dc90ba003398f57e794b2101 594 PANTHER PTHR10909 3 478 5.2E-204 T 22-04-2016 NHAM_RS04045 1bfd9d01dc90ba003398f57e794b2101 594 Gene3D G3DSA:2.40.110.10 160 270 2.9E-23 T 22-04-2016 NHAM_RS04045 1bfd9d01dc90ba003398f57e794b2101 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 449 5.9E-25 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS04045 1bfd9d01dc90ba003398f57e794b2101 594 PANTHER PTHR10909:SF296 3 478 5.2E-204 T 22-04-2016 NHAM_RS04045 1bfd9d01dc90ba003398f57e794b2101 594 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 465 586 1.9E-18 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain NHAM_RS04045 1bfd9d01dc90ba003398f57e794b2101 594 SUPERFAMILY SSF56645 38 280 1.03E-54 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NHAM_RS04045 1bfd9d01dc90ba003398f57e794b2101 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 156 2.0E-10 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NHAM_RS04045 1bfd9d01dc90ba003398f57e794b2101 594 SUPERFAMILY SSF47203 281 462 3.22E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS04045 1bfd9d01dc90ba003398f57e794b2101 594 Gene3D G3DSA:1.10.540.10 38 157 5.0E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 SMART SM00091 212 280 12.0 T 22-04-2016 IPR000014 PAS domain NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 SMART SM00091 338 405 3.6 T 22-04-2016 IPR000014 PAS domain NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 SMART SM00091 85 152 2.5 T 22-04-2016 IPR000014 PAS domain NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 Gene3D G3DSA:3.40.50.2300 732 850 3.9E-32 T 22-04-2016 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 88 205 1.0E-9 T 22-04-2016 IPR000014 PAS domain NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 PANTHER PTHR24423:SF379 86 215 5.5E-234 T 22-04-2016 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 PANTHER PTHR24423:SF379 336 850 5.5E-234 T 22-04-2016 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 Pfam PF08448 PAS fold 344 454 4.0E-9 T 22-04-2016 IPR013656 PAS fold-4 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 Pfam PF08448 PAS fold 92 201 4.4E-6 T 22-04-2016 IPR013656 PAS fold-4 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 Pfam PF00072 Response regulator receiver domain 735 846 2.0E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 532 2.5E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 Gene3D G3DSA:3.30.450.20 198 315 8.1E-4 T 22-04-2016 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 SMART SM00387 576 699 2.0E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 SUPERFAMILY SSF47384 461 531 1.67E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 PANTHER PTHR24423 86 215 5.5E-234 T 22-04-2016 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 PANTHER PTHR24423 336 850 5.5E-234 T 22-04-2016 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 SUPERFAMILY SSF55785 196 311 4.01E-5 T 22-04-2016 IPR000014 PAS domain NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 Gene3D G3DSA:3.30.450.20 87 197 1.9E-13 T 22-04-2016 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 SMART SM00388 468 534 1.4E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 SUPERFAMILY SSF55785 333 440 3.66E-7 T 22-04-2016 IPR000014 PAS domain NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 SMART SM00448 733 846 2.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 SUPERFAMILY SSF52172 734 850 2.13E-29 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 Gene3D G3DSA:3.30.565.10 521 699 8.6E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 697 8.9E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 SUPERFAMILY SSF55874 524 701 1.44E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 Gene3D G3DSA:1.10.287.130 463 520 5.7E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 Gene3D G3DSA:3.30.450.20 334 453 1.3E-6 T 22-04-2016 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 SUPERFAMILY SSF55785 87 198 3.32E-12 T 22-04-2016 IPR000014 PAS domain NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 642 1.8E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 656 1.8E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 PRINTS PR00344 Bacterial sensor protein C-terminal signature 683 696 1.8E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07135 80e9249e1b8baddd6625c033176ba883 853 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 677 1.8E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 PANTHER PTHR11465 13 496 1.5E-251 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 Pfam PF00199 Catalase 13 390 4.4E-181 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 338 346 - T 22-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 SMART SM01060 13 395 6.3E-266 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 PIRSF PIRSF038928 2 490 1.1E-230 T 22-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 Gene3D G3DSA:2.40.180.10 5 362 4.5E-169 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 SUPERFAMILY SSF56634 6 490 1.02E-194 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 Pfam PF06628 Catalase-related immune-responsive 422 483 6.8E-14 T 22-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 ProSitePatterns PS00438 Catalase proximal active site signature. 49 65 - T 22-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 PRINTS PR00067 Catalase signature 109 126 9.3E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 PRINTS PR00067 Catalase signature 325 351 9.3E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 PRINTS PR00067 Catalase signature 88 106 9.3E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 PRINTS PR00067 Catalase signature 293 320 9.3E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 PRINTS PR00067 Catalase signature 26 49 9.3E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04375 b58a3cb1f3d23783206aad2b95f3f48d 499 PRINTS PR00067 Catalase signature 128 146 9.3E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 PANTHER PTHR11465 13 496 1.5E-251 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 Pfam PF00199 Catalase 13 390 4.4E-181 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 338 346 - T 22-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 SMART SM01060 13 395 6.3E-266 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 PIRSF PIRSF038928 2 490 1.1E-230 T 22-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 Gene3D G3DSA:2.40.180.10 5 362 4.5E-169 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 SUPERFAMILY SSF56634 6 490 1.02E-194 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 Pfam PF06628 Catalase-related immune-responsive 422 483 6.8E-14 T 22-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 ProSitePatterns PS00438 Catalase proximal active site signature. 49 65 - T 22-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 PRINTS PR00067 Catalase signature 109 126 9.3E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 PRINTS PR00067 Catalase signature 325 351 9.3E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 PRINTS PR00067 Catalase signature 88 106 9.3E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 PRINTS PR00067 Catalase signature 293 320 9.3E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 PRINTS PR00067 Catalase signature 26 49 9.3E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04165 b58a3cb1f3d23783206aad2b95f3f48d 499 PRINTS PR00067 Catalase signature 128 146 9.3E-68 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS00190 9bd8d4d49916d6b10091499afd259091 198 Gene3D G3DSA:1.20.1050.10 89 186 7.4E-17 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS00190 9bd8d4d49916d6b10091499afd259091 198 SUPERFAMILY SSF52833 1 83 1.1E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00190 9bd8d4d49916d6b10091499afd259091 198 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 74 2.6E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NHAM_RS00190 9bd8d4d49916d6b10091499afd259091 198 PANTHER PTHR11260:SF285 1 193 9.7E-45 T 22-04-2016 NHAM_RS00190 9bd8d4d49916d6b10091499afd259091 198 SUPERFAMILY SSF47616 81 192 9.47E-21 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS00190 9bd8d4d49916d6b10091499afd259091 198 Pfam PF13410 Glutathione S-transferase, C-terminal domain 121 165 5.0E-6 T 22-04-2016 NHAM_RS00190 9bd8d4d49916d6b10091499afd259091 198 PANTHER PTHR11260 1 193 9.7E-45 T 22-04-2016 NHAM_RS00190 9bd8d4d49916d6b10091499afd259091 198 Gene3D G3DSA:3.40.30.10 2 88 9.7E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00740 a9d17f3093b9666e754d0f59a8d8bac1 398 SUPERFAMILY SSF53822 63 388 4.32E-62 T 22-04-2016 IPR028082 Periplasmic binding protein-like I NHAM_RS00740 a9d17f3093b9666e754d0f59a8d8bac1 398 Gene3D G3DSA:3.40.50.2300 63 171 1.3E-28 T 22-04-2016 NHAM_RS00740 a9d17f3093b9666e754d0f59a8d8bac1 398 Gene3D G3DSA:3.40.50.2300 294 376 1.3E-28 T 22-04-2016 NHAM_RS00740 a9d17f3093b9666e754d0f59a8d8bac1 398 Gene3D G3DSA:3.40.50.2300 173 266 4.4E-7 T 22-04-2016 NHAM_RS00740 a9d17f3093b9666e754d0f59a8d8bac1 398 PANTHER PTHR30483:SF7 62 387 1.8E-91 T 22-04-2016 NHAM_RS00740 a9d17f3093b9666e754d0f59a8d8bac1 398 Pfam PF13458 Periplasmic binding protein 62 384 2.4E-34 T 22-04-2016 IPR028081 Leucine-binding protein domain NHAM_RS00740 a9d17f3093b9666e754d0f59a8d8bac1 398 PANTHER PTHR30483 62 387 1.8E-91 T 22-04-2016 NHAM_RS11945 a68330ce270b8ab3c564bf836016c7ef 335 Gene3D G3DSA:3.40.718.10 4 331 1.6E-122 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NHAM_RS11945 a68330ce270b8ab3c564bf836016c7ef 335 PANTHER PTHR30004 3 331 1.3E-137 T 22-04-2016 NHAM_RS11945 a68330ce270b8ab3c564bf836016c7ef 335 SUPERFAMILY SSF53659 3 331 4.53E-108 T 22-04-2016 NHAM_RS11945 a68330ce270b8ab3c564bf836016c7ef 335 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 325 3.5E-101 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 NHAM_RS11945 a68330ce270b8ab3c564bf836016c7ef 335 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 329 1.6E-123 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 NHAM_RS11945 a68330ce270b8ab3c564bf836016c7ef 335 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 329 35.865 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 NHAM_RS11945 a68330ce270b8ab3c564bf836016c7ef 335 PANTHER PTHR30004:SF6 3 331 1.3E-137 T 22-04-2016 NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 Pfam PF07498 Rho termination factor, N-terminal domain 8 48 3.2E-18 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 PANTHER PTHR15184 26 420 5.6E-190 T 22-04-2016 NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 TIGRFAM TIGR00767 rho: transcription termination factor Rho 5 420 3.4E-216 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 Gene3D G3DSA:1.10.720.10 4 49 1.4E-22 T 22-04-2016 NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 SUPERFAMILY SSF68912 4 46 5.49E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 SMART SM00382 173 358 6.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 421 249.367 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 PANTHER PTHR15184:SF34 26 420 5.6E-190 T 22-04-2016 NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 SMART SM00959 8 50 5.2E-19 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 SMART SM00357 55 121 1.1E-19 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 Pfam PF07497 Rho termination factor, RNA-binding domain 55 128 2.2E-31 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 Gene3D G3DSA:3.40.50.300 134 419 2.1E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 SUPERFAMILY SSF50249 51 128 2.6E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 SUPERFAMILY SSF52540 93 373 6.75E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 366 9.0E-24 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS00540 d1a665559a8569286e0eb1485f8e0bc9 421 Gene3D G3DSA:2.40.50.140 52 120 6.9E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS21085 22e37381d01dcafe6ca6d4f375d97e45 123 Gene3D G3DSA:3.40.1190.10 2 123 2.8E-44 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS21085 22e37381d01dcafe6ca6d4f375d97e45 123 PANTHER PTHR11136 1 123 8.7E-43 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 NHAM_RS21085 22e37381d01dcafe6ca6d4f375d97e45 123 SUPERFAMILY SSF53623 2 123 1.7E-44 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS21085 22e37381d01dcafe6ca6d4f375d97e45 123 PANTHER PTHR11136:SF0 1 123 8.7E-43 T 22-04-2016 NHAM_RS12410 9d566701eaca77760e2e005466d31b88 267 Pfam PF02698 DUF218 domain 80 247 5.8E-29 T 22-04-2016 IPR003848 Domain of unknown function DUF218 NHAM_RS12410 9d566701eaca77760e2e005466d31b88 267 Gene3D G3DSA:3.40.50.620 77 216 3.3E-27 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS12410 9d566701eaca77760e2e005466d31b88 267 PANTHER PTHR30336 1 264 2.9E-52 T 22-04-2016 NHAM_RS12410 9d566701eaca77760e2e005466d31b88 267 PANTHER PTHR30336:SF1 1 264 2.9E-52 T 22-04-2016 NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 17 291 3.8E-120 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 SMART SM00861 328 493 3.6E-63 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 Gene3D G3DSA:3.40.50.970 314 504 2.7E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 19 637 2.0E-246 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 SUPERFAMILY SSF52518 14 359 7.0E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 SUPERFAMILY SSF52922 501 638 2.22E-34 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 PANTHER PTHR11624 249 649 0.0 T 22-04-2016 IPR033247 Transketolase family NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 PANTHER PTHR11624 30 224 0.0 T 22-04-2016 IPR033247 Transketolase family NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 SUPERFAMILY SSF52518 325 514 2.62E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 Pfam PF02780 Transketolase, C-terminal domain 505 629 1.5E-28 T 22-04-2016 IPR033248 Transketolase, C-terminal domain NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 16 638 45.057 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 Pfam PF02779 Transketolase, pyrimidine binding domain 328 490 6.4E-38 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 ProSitePatterns PS00802 Transketolase signature 2. 434 450 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 Gene3D G3DSA:3.40.50.970 247 313 9.9E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 Gene3D G3DSA:3.40.50.970 11 201 9.9E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 PANTHER PTHR11624:SF20 249 649 0.0 T 22-04-2016 NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 PANTHER PTHR11624:SF20 30 224 0.0 T 22-04-2016 NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 Gene3D G3DSA:3.40.50.920 505 637 3.5E-38 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NHAM_RS04025 2f3c76727720c343baca17703d452cea 649 ProSitePatterns PS00801 Transketolase signature 1. 42 61 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NHAM_RS10705 edd6c7055d1ad5378f57f407d8999c58 165 PIRSF PIRSF003174 1 159 1.5E-65 T 22-04-2016 IPR010292 Uncharacterised protein family CreA NHAM_RS10705 edd6c7055d1ad5378f57f407d8999c58 165 Pfam PF05981 CreA protein 21 149 1.5E-48 T 22-04-2016 IPR010292 Uncharacterised protein family CreA NHAM_RS10705 edd6c7055d1ad5378f57f407d8999c58 165 PANTHER PTHR37952:SF2 1 162 3.0E-88 T 22-04-2016 NHAM_RS10705 edd6c7055d1ad5378f57f407d8999c58 165 PANTHER PTHR37952 1 162 3.0E-88 T 22-04-2016 NHAM_RS02700 464ce9498d11f44463630ce43e1a240a 430 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 25 419 3.2E-135 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NHAM_RS02700 464ce9498d11f44463630ce43e1a240a 430 SUPERFAMILY SSF53720 19 429 1.31E-108 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NHAM_RS02700 464ce9498d11f44463630ce43e1a240a 430 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 336 357 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NHAM_RS02700 464ce9498d11f44463630ce43e1a240a 430 Gene3D G3DSA:3.40.309.10 240 387 2.3E-35 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NHAM_RS02700 464ce9498d11f44463630ce43e1a240a 430 PANTHER PTHR11063:SF8 21 429 5.5E-169 T 22-04-2016 NHAM_RS02700 464ce9498d11f44463630ce43e1a240a 430 PANTHER PTHR11063 21 429 5.5E-169 T 22-04-2016 NHAM_RS02700 464ce9498d11f44463630ce43e1a240a 430 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 17 429 39.121 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NHAM_RS02700 464ce9498d11f44463630ce43e1a240a 430 Pfam PF00171 Aldehyde dehydrogenase family 23 292 1.4E-12 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS02700 464ce9498d11f44463630ce43e1a240a 430 PIRSF PIRSF000151 11 430 1.2E-164 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NHAM_RS02700 464ce9498d11f44463630ce43e1a240a 430 Gene3D G3DSA:3.40.605.10 18 237 2.8E-94 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS02700 464ce9498d11f44463630ce43e1a240a 430 Gene3D G3DSA:3.40.605.10 388 429 2.8E-94 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Gene3D G3DSA:3.30.1490.20 202 250 4.8E-19 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Gene3D G3DSA:3.40.50.20 588 723 3.8E-55 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 SUPERFAMILY SSF52335 1016 1152 8.63E-39 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 479 598 8.0E-38 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 SUPERFAMILY SSF56059 199 451 2.47E-100 T 22-04-2016 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PANTHER PTHR11405:SF5 200 798 0.0 T 22-04-2016 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PANTHER PTHR11405:SF5 820 1153 0.0 T 22-04-2016 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PANTHER PTHR11405:SF5 1 154 0.0 T 22-04-2016 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 SMART SM00851 1036 1122 6.0E-31 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PANTHER PTHR11405 200 798 0.0 T 22-04-2016 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PANTHER PTHR11405 820 1153 0.0 T 22-04-2016 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PANTHER PTHR11405 1 154 0.0 T 22-04-2016 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 SUPERFAMILY SSF52440 1 132 2.59E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Gene3D G3DSA:1.10.1030.10 450 587 4.3E-46 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Gene3D G3DSA:3.40.50.20 4 112 4.8E-40 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 SUPERFAMILY SSF52440 614 736 8.63E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 192 1131 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 734 956 1.9E-26 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 199 384 4.4E-65 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 920 949 4.6E-33 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 656 666 4.6E-33 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 993 1011 4.6E-33 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 627 641 4.6E-33 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 865 882 4.6E-33 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 774 786 4.6E-33 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 831 850 4.6E-33 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Gene3D G3DSA:3.30.1490.20 747 831 1.1E-18 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Gene3D G3DSA:3.40.50.1380 1018 1152 5.9E-39 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 SMART SM01096 476 598 5.0E-67 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 347 354 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 920 927 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Pfam PF02142 MGS-like domain 1037 1122 4.6E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 SUPERFAMILY SSF56059 734 1013 1.43E-90 T 22-04-2016 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Gene3D G3DSA:3.30.470.20 251 449 3.5E-77 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Gene3D G3DSA:3.30.470.20 832 1013 1.6E-69 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 SUPERFAMILY SSF48108 446 600 2.22E-46 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14760 ef28d5edc334a13cf496cf3326d4f14e 1154 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1142 12.932 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS12505 5bc02add0481cbf50dd5762c9a1031b5 418 PANTHER PTHR31384 83 344 6.5E-69 T 22-04-2016 NHAM_RS12505 5bc02add0481cbf50dd5762c9a1031b5 418 Gene3D G3DSA:3.40.630.30 213 359 2.3E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS12505 5bc02add0481cbf50dd5762c9a1031b5 418 SUPERFAMILY SSF55729 213 382 4.03E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS12505 5bc02add0481cbf50dd5762c9a1031b5 418 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 15 411 4.0E-163 T 22-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition NHAM_RS18860 64afc64c77163469582f73d25c630245 226 Pfam PF06080 Protein of unknown function (DUF938) 23 223 3.9E-66 T 22-04-2016 IPR010342 Protein of unknown function DUF938 NHAM_RS18860 64afc64c77163469582f73d25c630245 226 Gene3D G3DSA:3.40.50.150 35 221 2.3E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS18860 64afc64c77163469582f73d25c630245 226 PANTHER PTHR20974:SF0 17 224 3.4E-88 T 22-04-2016 NHAM_RS18860 64afc64c77163469582f73d25c630245 226 SUPERFAMILY SSF53335 26 217 4.35E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS18860 64afc64c77163469582f73d25c630245 226 PANTHER PTHR20974 17 224 3.4E-88 T 22-04-2016 IPR010342 Protein of unknown function DUF938 NHAM_RS16740 9eaef00fc1555ffa1fb1ff067b3a28b0 158 Gene3D G3DSA:3.40.30.10 4 158 5.4E-70 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS16740 9eaef00fc1555ffa1fb1ff067b3a28b0 158 PIRSF PIRSF000303 1 158 5.2E-67 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NHAM_RS16740 9eaef00fc1555ffa1fb1ff067b3a28b0 158 Pfam PF00255 Glutathione peroxidase 4 111 1.5E-43 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NHAM_RS16740 9eaef00fc1555ffa1fb1ff067b3a28b0 158 PANTHER PTHR11592 4 158 2.0E-88 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NHAM_RS16740 9eaef00fc1555ffa1fb1ff067b3a28b0 158 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site NHAM_RS16740 9eaef00fc1555ffa1fb1ff067b3a28b0 158 PRINTS PR01011 Glutathione peroxidase family signature 22 39 5.6E-20 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NHAM_RS16740 9eaef00fc1555ffa1fb1ff067b3a28b0 158 PRINTS PR01011 Glutathione peroxidase family signature 57 73 5.6E-20 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NHAM_RS16740 9eaef00fc1555ffa1fb1ff067b3a28b0 158 PRINTS PR01011 Glutathione peroxidase family signature 122 131 5.6E-20 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 NHAM_RS16740 9eaef00fc1555ffa1fb1ff067b3a28b0 158 SUPERFAMILY SSF52833 4 158 5.36E-61 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS16740 9eaef00fc1555ffa1fb1ff067b3a28b0 158 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 22-04-2016 IPR029759 Glutathione peroxidase active site NHAM_RS13760 72b114f581b3f4878b5d1eefef4ff357 292 Pfam PF00494 Squalene/phytoene synthase 13 250 7.4E-48 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 NHAM_RS13760 72b114f581b3f4878b5d1eefef4ff357 292 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 11 270 5.0E-88 T 22-04-2016 IPR017827 Squalene synthase HpnC NHAM_RS13760 72b114f581b3f4878b5d1eefef4ff357 292 Gene3D G3DSA:1.10.600.10 16 251 2.2E-43 T 22-04-2016 IPR008949 Isoprenoid synthase domain NHAM_RS13760 72b114f581b3f4878b5d1eefef4ff357 292 SUPERFAMILY SSF48576 13 277 1.31E-57 T 22-04-2016 IPR008949 Isoprenoid synthase domain NHAM_RS13760 72b114f581b3f4878b5d1eefef4ff357 292 PANTHER PTHR31480:SF8 1 288 2.6E-104 T 22-04-2016 NHAM_RS13760 72b114f581b3f4878b5d1eefef4ff357 292 PANTHER PTHR31480 1 288 2.6E-104 T 22-04-2016 NHAM_RS05240 554843cfb7634daebe3fd16f700327f9 791 Gene3D G3DSA:2.170.130.10 90 197 4.2E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS05240 554843cfb7634daebe3fd16f700327f9 791 Pfam PF00593 TonB dependent receptor 508 788 1.2E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS05240 554843cfb7634daebe3fd16f700327f9 791 Gene3D G3DSA:2.40.170.20 198 308 8.3E-74 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS05240 554843cfb7634daebe3fd16f700327f9 791 Gene3D G3DSA:2.40.170.20 342 790 8.3E-74 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS05240 554843cfb7634daebe3fd16f700327f9 791 PANTHER PTHR32552 90 481 5.4E-47 T 22-04-2016 NHAM_RS05240 554843cfb7634daebe3fd16f700327f9 791 PANTHER PTHR32552 497 790 5.4E-47 T 22-04-2016 NHAM_RS05240 554843cfb7634daebe3fd16f700327f9 791 SUPERFAMILY SSF56935 23 790 2.27E-98 T 22-04-2016 NHAM_RS05240 554843cfb7634daebe3fd16f700327f9 791 Pfam PF07715 TonB-dependent Receptor Plug Domain 91 195 1.4E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 SUPERFAMILY SSF52518 9 314 3.04E-111 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 658 1.0E-236 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 Gene3D G3DSA:3.40.50.920 537 660 1.5E-36 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 PANTHER PTHR11624 341 662 0.0 T 22-04-2016 IPR033247 Transketolase family NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 PANTHER PTHR11624 2 307 0.0 T 22-04-2016 IPR033247 Transketolase family NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 Pfam PF02779 Transketolase, pyrimidine binding domain 352 522 2.0E-48 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 SUPERFAMILY SSF52518 346 524 1.12E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 Pfam PF02780 Transketolase, C-terminal domain 547 652 1.4E-6 T 22-04-2016 IPR033248 Transketolase, C-terminal domain NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 SUPERFAMILY SSF52922 532 660 7.57E-35 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 324 9.1E-134 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 ProSitePatterns PS00802 Transketolase signature 2. 465 481 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 PANTHER PTHR11624:SF1 341 662 0.0 T 22-04-2016 NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 PANTHER PTHR11624:SF1 2 307 0.0 T 22-04-2016 NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 SMART SM00861 352 524 8.5E-69 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 Gene3D G3DSA:3.40.50.970 328 527 4.3E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS18120 07f89653a1cf32131399cbcf0583f257 663 Gene3D G3DSA:3.40.50.970 8 316 5.5E-118 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 SUPERFAMILY SSF55021 847 916 2.71E-13 T 22-04-2016 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 SUPERFAMILY SSF81593 223 344 1.33E-7 T 22-04-2016 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 Pfam PF08335 GlnD PII-uridylyltransferase 213 351 1.2E-33 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 Pfam PF01909 Nucleotidyltransferase domain 107 134 2.1E-4 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 56 920 3.5E-284 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 Pfam PF01966 HD domain 500 597 1.1E-9 T 22-04-2016 IPR006674 HD domain NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 PIRSF PIRSF006288 30 929 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 SUPERFAMILY SSF55021 738 803 1.79E-8 T 22-04-2016 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 931 314.396 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 Gene3D G3DSA:3.30.70.260 847 904 1.6E-15 T 22-04-2016 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 Gene3D G3DSA:3.30.70.260 740 787 4.3E-4 T 22-04-2016 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 Gene3D G3DSA:3.30.460.10 122 197 7.4E-6 T 22-04-2016 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 Pfam PF01842 ACT domain 850 898 1.7E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 Gene3D G3DSA:1.10.3210.10 469 665 9.2E-29 T 22-04-2016 IPR006674 HD domain NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 PANTHER PTHR13734:SF45 148 675 6.4E-108 T 22-04-2016 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 Gene3D G3DSA:3.30.460.10 71 121 5.9E-4 T 22-04-2016 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 PANTHER PTHR13734 148 675 6.4E-108 T 22-04-2016 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 SMART SM00471 495 643 4.3E-4 T 22-04-2016 IPR003607 HD/PDEase domain NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 SUPERFAMILY SSF81891 400 643 7.85E-28 T 22-04-2016 NHAM_RS01145 cba81f6068e2a364e407bb55ec0c548f 931 SUPERFAMILY SSF81301 46 207 1.24E-28 T 22-04-2016 NHAM_RS04410 da6e5999072fbc749f5da047d980a926 295 PANTHER PTHR10992:SF877 33 295 2.6E-27 T 22-04-2016 NHAM_RS04410 da6e5999072fbc749f5da047d980a926 295 SUPERFAMILY SSF53474 24 294 5.46E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS04410 da6e5999072fbc749f5da047d980a926 295 Pfam PF12697 Alpha/beta hydrolase family 52 287 5.0E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS04410 da6e5999072fbc749f5da047d980a926 295 PANTHER PTHR10992 33 295 2.6E-27 T 22-04-2016 NHAM_RS04410 da6e5999072fbc749f5da047d980a926 295 Gene3D G3DSA:3.40.50.1820 23 294 1.4E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS10815 4a9941660b888ad048e48bb2fd342fbb 603 Pfam PF02543 Carbamoyltransferase N-terminus 8 350 5.5E-43 T 22-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 NHAM_RS10815 4a9941660b888ad048e48bb2fd342fbb 603 Pfam PF16861 Carbamoyltransferase C-terminus 406 575 2.2E-75 T 22-04-2016 IPR031730 Carbamoyltransferase, C-terminal NHAM_RS10815 4a9941660b888ad048e48bb2fd342fbb 603 PANTHER PTHR34847 6 590 1.1E-109 T 22-04-2016 NHAM_RS10815 4a9941660b888ad048e48bb2fd342fbb 603 SUPERFAMILY SSF53067 264 357 3.75E-12 T 22-04-2016 NHAM_RS10815 4a9941660b888ad048e48bb2fd342fbb 603 SUPERFAMILY SSF53067 202 233 3.75E-12 T 22-04-2016 NHAM_RS10815 4a9941660b888ad048e48bb2fd342fbb 603 SUPERFAMILY SSF53067 7 82 3.75E-12 T 22-04-2016 NHAM_RS10815 4a9941660b888ad048e48bb2fd342fbb 603 SUPERFAMILY SSF53067 117 163 3.75E-12 T 22-04-2016 NHAM_RS00350 6774eb5a2ea03fa18a440a007f5d16d2 478 SUPERFAMILY SSF54373 283 387 3.6E-11 T 22-04-2016 NHAM_RS00350 6774eb5a2ea03fa18a440a007f5d16d2 478 PANTHER PTHR10742:SF277 23 465 1.5E-76 T 22-04-2016 NHAM_RS00350 6774eb5a2ea03fa18a440a007f5d16d2 478 Gene3D G3DSA:3.50.50.60 396 441 6.3E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS00350 6774eb5a2ea03fa18a440a007f5d16d2 478 Gene3D G3DSA:3.50.50.60 202 299 6.3E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS00350 6774eb5a2ea03fa18a440a007f5d16d2 478 Gene3D G3DSA:3.50.50.60 31 114 6.3E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS00350 6774eb5a2ea03fa18a440a007f5d16d2 478 PANTHER PTHR10742 23 465 1.5E-76 T 22-04-2016 NHAM_RS00350 6774eb5a2ea03fa18a440a007f5d16d2 478 SUPERFAMILY SSF51905 376 438 3.56E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS00350 6774eb5a2ea03fa18a440a007f5d16d2 478 SUPERFAMILY SSF51905 31 297 3.56E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS00350 6774eb5a2ea03fa18a440a007f5d16d2 478 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 34 56 8.8E-5 T 22-04-2016 NHAM_RS00350 6774eb5a2ea03fa18a440a007f5d16d2 478 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 404 419 8.8E-5 T 22-04-2016 NHAM_RS00350 6774eb5a2ea03fa18a440a007f5d16d2 478 Pfam PF01593 Flavin containing amine oxidoreductase 199 436 1.3E-27 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 NHAM_RS00350 6774eb5a2ea03fa18a440a007f5d16d2 478 Pfam PF01593 Flavin containing amine oxidoreductase 43 105 1.2E-13 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 SUPERFAMILY SSF82714 726 795 1.44E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 SUPERFAMILY SSF82693 568 668 2.62E-6 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 PANTHER PTHR32063 819 1057 0.0 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 PANTHER PTHR32063 3 799 0.0 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 SUPERFAMILY SSF82866 829 1053 1.18E-58 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 SUPERFAMILY SSF82693 156 192 2.22E-18 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 SUPERFAMILY SSF82693 278 334 2.22E-18 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 3 1053 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 Gene3D G3DSA:3.30.2090.10 193 275 1.7E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 Gene3D G3DSA:3.30.2090.10 726 830 6.7E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 SUPERFAMILY SSF82866 300 506 6.54E-32 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 Pfam PF00873 AcrB/AcrD/AcrF family 7 1052 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 3.4E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 3.4E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 PRINTS PR00702 Acriflavin resistance protein family signature 481 504 3.4E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 3.4E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 PRINTS PR00702 Acriflavin resistance protein family signature 456 479 3.4E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 PRINTS PR00702 Acriflavin resistance protein family signature 340 363 3.4E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 Gene3D G3DSA:1.10.3850.10 285 509 8.4E-47 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 Gene3D G3DSA:1.10.3850.10 837 1053 6.0E-62 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 PANTHER PTHR32063:SF24 819 1057 0.0 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 PANTHER PTHR32063:SF24 3 799 0.0 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 Gene3D G3DSA:3.30.70.1430 43 143 2.8E-29 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 SUPERFAMILY SSF82714 193 275 2.22E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 Gene3D G3DSA:3.30.70.1430 579 667 6.6E-4 T 22-04-2016 NHAM_RS09460 e1050b4d50c14479881b8566ed391c8a 1072 SUPERFAMILY SSF82693 43 127 1.52E-22 T 22-04-2016 NHAM_RS05545 55cfd438aa1241afdca9a99a4fdae0f3 154 PANTHER PTHR11049:SF5 18 144 7.9E-58 T 22-04-2016 NHAM_RS05545 55cfd438aa1241afdca9a99a4fdae0f3 154 PANTHER PTHR11049 18 144 7.9E-58 T 22-04-2016 NHAM_RS05545 55cfd438aa1241afdca9a99a4fdae0f3 154 SUPERFAMILY SSF54637 24 144 3.31E-36 T 22-04-2016 IPR029069 HotDog domain NHAM_RS05545 55cfd438aa1241afdca9a99a4fdae0f3 154 Gene3D G3DSA:3.10.129.10 24 142 5.8E-38 T 22-04-2016 IPR029069 HotDog domain NHAM_RS05545 55cfd438aa1241afdca9a99a4fdae0f3 154 Pfam PF03061 Thioesterase superfamily 40 109 1.6E-18 T 22-04-2016 IPR006683 Thioesterase domain NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 268 283 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 PANTHER PTHR32125 246 389 7.3E-65 T 22-04-2016 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 PANTHER PTHR32125 1 74 7.3E-65 T 22-04-2016 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 Gene3D G3DSA:3.90.550.10 3 227 6.6E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 225 1.6E-67 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 SUPERFAMILY SSF53448 7 226 3.05E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 6 234 28.631 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 SUPERFAMILY SSF69765 234 388 1.22E-58 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 Pfam PF02542 YgbB family 234 387 1.2E-56 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 234 389 31.881 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 5 390 43.017 T 22-04-2016 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056|UniPathway: UPA00056 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 235 387 4.4E-59 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 227 4.7E-62 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 Gene3D G3DSA:3.30.1330.50 233 388 1.3E-63 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 PANTHER PTHR32125:SF5 246 389 7.3E-65 T 22-04-2016 NHAM_RS09385 f09e0cbf6ed73d52512b7b23bebdb726 403 PANTHER PTHR32125:SF5 1 74 7.3E-65 T 22-04-2016 NHAM_RS08700 b05167e3599f78f4d97c81629cb85ebd 151 Gene3D G3DSA:3.10.129.10 8 148 8.4E-51 T 22-04-2016 IPR029069 HotDog domain NHAM_RS08700 b05167e3599f78f4d97c81629cb85ebd 151 SUPERFAMILY SSF54637 10 148 3.5E-42 T 22-04-2016 IPR029069 HotDog domain NHAM_RS08700 b05167e3599f78f4d97c81629cb85ebd 151 Pfam PF07977 FabA-like domain 19 143 9.6E-34 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NHAM_RS08700 b05167e3599f78f4d97c81629cb85ebd 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 10 151 31.593 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NHAM_RS08700 b05167e3599f78f4d97c81629cb85ebd 151 PANTHER PTHR30272 11 151 2.6E-63 T 22-04-2016 NHAM_RS08700 b05167e3599f78f4d97c81629cb85ebd 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 10 148 6.9E-54 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 Gene3D G3DSA:1.10.3850.10 272 496 8.1E-68 T 22-04-2016 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 Gene3D G3DSA:1.10.3850.10 803 1030 2.9E-55 T 22-04-2016 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 SUPERFAMILY SSF82693 45 128 1.15E-20 T 22-04-2016 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 SUPERFAMILY SSF82693 268 325 2.28E-18 T 22-04-2016 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 SUPERFAMILY SSF82866 797 1032 1.03E-50 T 22-04-2016 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 SUPERFAMILY SSF82866 291 495 2.75E-41 T 22-04-2016 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 Gene3D G3DSA:3.30.2090.10 711 800 2.1E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 Gene3D G3DSA:3.30.70.1430 45 142 3.9E-24 T 22-04-2016 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1031 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 SUPERFAMILY SSF82714 183 266 7.19E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 PANTHER PTHR32063 2 1038 0.0 T 22-04-2016 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 PANTHER PTHR32063:SF19 2 1038 0.0 T 22-04-2016 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 Pfam PF00873 AcrB/AcrD/AcrF family 24 1030 4.2E-241 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.9E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 6.9E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 6.9E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 6.9E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 6.9E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 6.9E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 6.9E-32 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 Gene3D G3DSA:3.30.2090.10 183 265 7.3E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 SUPERFAMILY SSF82693 137 182 2.28E-18 T 22-04-2016 NHAM_RS09480 0240cd6c7158ca9237933faafeacef91 1060 SUPERFAMILY SSF82714 711 797 7.72E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS16620 75f3707fe43f03fe5b367be7a3dd6f32 121 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 116 1.3E-27 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NHAM_RS16620 75f3707fe43f03fe5b367be7a3dd6f32 121 SUPERFAMILY SSF55620 1 118 1.28E-29 T 22-04-2016 NHAM_RS16620 75f3707fe43f03fe5b367be7a3dd6f32 121 Gene3D G3DSA:3.30.479.10 1 116 2.0E-31 T 22-04-2016 NHAM_RS16620 75f3707fe43f03fe5b367be7a3dd6f32 121 PANTHER PTHR12589 1 121 2.0E-32 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NHAM_RS16620 75f3707fe43f03fe5b367be7a3dd6f32 121 PIRSF PIRSF006113 1 119 9.9E-28 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein NHAM_RS11380 e7edb9b52293ca0ded7974784d03ba7f 112 PRINTS PR00340 P-II protein signature 23 41 1.3E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS11380 e7edb9b52293ca0ded7974784d03ba7f 112 PRINTS PR00340 P-II protein signature 83 103 1.3E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS11380 e7edb9b52293ca0ded7974784d03ba7f 112 PRINTS PR00340 P-II protein signature 2 17 1.3E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS11380 e7edb9b52293ca0ded7974784d03ba7f 112 PRINTS PR00340 P-II protein signature 52 75 1.3E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS11380 e7edb9b52293ca0ded7974784d03ba7f 112 PIRSF PIRSF039144 1 112 1.8E-52 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS11380 e7edb9b52293ca0ded7974784d03ba7f 112 PANTHER PTHR30115 2 112 4.7E-62 T 22-04-2016 NHAM_RS11380 e7edb9b52293ca0ded7974784d03ba7f 112 SMART SM00938 4 105 1.7E-65 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS11380 e7edb9b52293ca0ded7974784d03ba7f 112 Gene3D G3DSA:3.30.70.120 2 112 5.1E-49 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NHAM_RS11380 e7edb9b52293ca0ded7974784d03ba7f 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 NHAM_RS11380 e7edb9b52293ca0ded7974784d03ba7f 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS11380 e7edb9b52293ca0ded7974784d03ba7f 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 NHAM_RS11380 e7edb9b52293ca0ded7974784d03ba7f 112 SUPERFAMILY SSF54913 2 112 1.21E-44 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta NHAM_RS00715 0219d532e73ae716b82519b3313e6389 565 Gene3D G3DSA:3.40.50.1390 8 123 1.9E-12 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS00715 0219d532e73ae716b82519b3313e6389 565 Pfam PF07508 Recombinase 193 296 8.1E-16 T 22-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 NHAM_RS00715 0219d532e73ae716b82519b3313e6389 565 Pfam PF00239 Resolvase, N terminal domain 9 166 8.1E-24 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS00715 0219d532e73ae716b82519b3313e6389 565 SMART SM00857 9 169 1.4E-24 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS00715 0219d532e73ae716b82519b3313e6389 565 SUPERFAMILY SSF53041 7 165 6.02E-16 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS00715 0219d532e73ae716b82519b3313e6389 565 PANTHER PTHR30461 1 556 2.3E-35 T 22-04-2016 NHAM_RS00715 0219d532e73ae716b82519b3313e6389 565 Pfam PF13408 Recombinase zinc beta ribbon domain 310 369 9.1E-12 T 22-04-2016 IPR025827 Recombinase zinc beta ribbon domain NHAM_RS15405 fc3607ac2da786c80ee20fa34e8052e0 343 PANTHER PTHR33055:SF2 3 339 1.6E-118 T 22-04-2016 NHAM_RS15405 fc3607ac2da786c80ee20fa34e8052e0 343 PANTHER PTHR33055 3 339 1.6E-118 T 22-04-2016 NHAM_RS15405 fc3607ac2da786c80ee20fa34e8052e0 343 Pfam PF01548 Transposase 7 146 7.6E-14 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS15405 fc3607ac2da786c80ee20fa34e8052e0 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 289 2.0E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS18890 fc3607ac2da786c80ee20fa34e8052e0 343 PANTHER PTHR33055:SF2 3 339 1.6E-118 T 22-04-2016 NHAM_RS18890 fc3607ac2da786c80ee20fa34e8052e0 343 PANTHER PTHR33055 3 339 1.6E-118 T 22-04-2016 NHAM_RS18890 fc3607ac2da786c80ee20fa34e8052e0 343 Pfam PF01548 Transposase 7 146 7.6E-14 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS18890 fc3607ac2da786c80ee20fa34e8052e0 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 289 2.0E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS00545 fc3607ac2da786c80ee20fa34e8052e0 343 PANTHER PTHR33055:SF2 3 339 1.6E-118 T 22-04-2016 NHAM_RS00545 fc3607ac2da786c80ee20fa34e8052e0 343 PANTHER PTHR33055 3 339 1.6E-118 T 22-04-2016 NHAM_RS00545 fc3607ac2da786c80ee20fa34e8052e0 343 Pfam PF01548 Transposase 7 146 7.6E-14 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS00545 fc3607ac2da786c80ee20fa34e8052e0 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 289 2.0E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS15045 fc3607ac2da786c80ee20fa34e8052e0 343 PANTHER PTHR33055:SF2 3 339 1.6E-118 T 22-04-2016 NHAM_RS15045 fc3607ac2da786c80ee20fa34e8052e0 343 PANTHER PTHR33055 3 339 1.6E-118 T 22-04-2016 NHAM_RS15045 fc3607ac2da786c80ee20fa34e8052e0 343 Pfam PF01548 Transposase 7 146 7.6E-14 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS15045 fc3607ac2da786c80ee20fa34e8052e0 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 289 2.0E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS11750 fc3607ac2da786c80ee20fa34e8052e0 343 PANTHER PTHR33055:SF2 3 339 1.6E-118 T 22-04-2016 NHAM_RS11750 fc3607ac2da786c80ee20fa34e8052e0 343 PANTHER PTHR33055 3 339 1.6E-118 T 22-04-2016 NHAM_RS11750 fc3607ac2da786c80ee20fa34e8052e0 343 Pfam PF01548 Transposase 7 146 7.6E-14 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS11750 fc3607ac2da786c80ee20fa34e8052e0 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 289 2.0E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS00660 fc3607ac2da786c80ee20fa34e8052e0 343 PANTHER PTHR33055:SF2 3 339 1.6E-118 T 22-04-2016 NHAM_RS00660 fc3607ac2da786c80ee20fa34e8052e0 343 PANTHER PTHR33055 3 339 1.6E-118 T 22-04-2016 NHAM_RS00660 fc3607ac2da786c80ee20fa34e8052e0 343 Pfam PF01548 Transposase 7 146 7.6E-14 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS00660 fc3607ac2da786c80ee20fa34e8052e0 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 289 2.0E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS04890 96cddef9d7ce4384aedcc8ffe73801b3 333 Gene3D G3DSA:1.10.3470.10 5 331 1.9E-93 T 22-04-2016 IPR029022 ABC transporter, BtuC-like NHAM_RS04890 96cddef9d7ce4384aedcc8ffe73801b3 333 PANTHER PTHR30472:SF34 1 333 1.8E-113 T 22-04-2016 NHAM_RS04890 96cddef9d7ce4384aedcc8ffe73801b3 333 SUPERFAMILY SSF81345 4 327 1.44E-71 T 22-04-2016 IPR029022 ABC transporter, BtuC-like NHAM_RS04890 96cddef9d7ce4384aedcc8ffe73801b3 333 Pfam PF01032 FecCD transport family 10 327 8.0E-81 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 NHAM_RS04890 96cddef9d7ce4384aedcc8ffe73801b3 333 PANTHER PTHR30472 1 333 1.8E-113 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 NHAM_RS20545 a392cc95072b663ed20c78d748ed9409 254 SUPERFAMILY SSF143081 2 214 1.15E-72 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS20545 a392cc95072b663ed20c78d748ed9409 254 Gene3D G3DSA:3.90.1680.10 1 219 1.4E-70 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS20545 a392cc95072b663ed20c78d748ed9409 254 PANTHER PTHR13604 2 227 8.6E-74 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS20545 a392cc95072b663ed20c78d748ed9409 254 Pfam PF02586 SOS response associated peptidase (SRAP) 1 209 1.9E-63 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS10715 624031c6d098ef55817044e03b48fb97 310 Pfam PF01522 Polysaccharide deacetylase 86 201 2.2E-21 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS10715 624031c6d098ef55817044e03b48fb97 310 PANTHER PTHR10587 54 294 6.7E-89 T 22-04-2016 NHAM_RS10715 624031c6d098ef55817044e03b48fb97 310 PANTHER PTHR10587:SF70 54 294 6.7E-89 T 22-04-2016 NHAM_RS10715 624031c6d098ef55817044e03b48fb97 310 Gene3D G3DSA:3.20.20.370 84 272 3.5E-51 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS10715 624031c6d098ef55817044e03b48fb97 310 SUPERFAMILY SSF88713 84 271 6.67E-48 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 SUPERFAMILY SSF55874 321 488 3.67E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 4.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 488 4.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 469 4.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 PANTHER PTHR24423:SF490 242 532 3.1E-90 T 22-04-2016 NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 PANTHER PTHR24423:SF490 119 147 3.1E-90 T 22-04-2016 NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 SMART SM00387 378 491 1.1E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 Gene3D G3DSA:1.10.287.130 256 318 1.6E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 Gene3D G3DSA:3.30.565.10 319 488 1.9E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 SMART SM00388 263 332 1.8E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 PANTHER PTHR24423 242 532 3.1E-90 T 22-04-2016 NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 PANTHER PTHR24423 119 147 3.1E-90 T 22-04-2016 NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 Pfam PF00512 His Kinase A (phospho-acceptor) domain 263 332 6.1E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 490 3.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07505 8e9ad1146bc7aa389de160b7ff5e4d16 536 SUPERFAMILY SSF47384 252 333 1.39E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS17490 453531642be43841a2e45bd6b4e4ffe6 832 SUPERFAMILY SSF82861 561 643 4.18E-13 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 NHAM_RS17490 453531642be43841a2e45bd6b4e4ffe6 832 Gene3D G3DSA:2.30.30.60 660 709 2.5E-16 T 22-04-2016 NHAM_RS17490 453531642be43841a2e45bd6b4e4ffe6 832 SUPERFAMILY SSF50182 645 709 1.01E-16 T 22-04-2016 IPR010920 LSM domain NHAM_RS17490 453531642be43841a2e45bd6b4e4ffe6 832 Gene3D G3DSA:3.30.70.100 717 799 2.1E-15 T 22-04-2016 NHAM_RS17490 453531642be43841a2e45bd6b4e4ffe6 832 PANTHER PTHR30347 270 832 1.5E-90 T 22-04-2016 NHAM_RS17490 453531642be43841a2e45bd6b4e4ffe6 832 Pfam PF12607 Protein of unknown function (DUF3772) 157 217 3.1E-17 T 22-04-2016 IPR022249 Domain of unknown function DUF3772 NHAM_RS17490 453531642be43841a2e45bd6b4e4ffe6 832 SUPERFAMILY SSF82689 716 811 3.27E-21 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 NHAM_RS17490 453531642be43841a2e45bd6b4e4ffe6 832 PANTHER PTHR30347:SF3 270 832 1.5E-90 T 22-04-2016 NHAM_RS17490 453531642be43841a2e45bd6b4e4ffe6 832 Pfam PF00924 Mechanosensitive ion channel 607 800 3.0E-45 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 NHAM_RS14020 6641ba16a33515cb68c92c9cc81fe3d8 1275 Pfam PF13502 AsmA-like C-terminal region 867 1077 7.5E-21 T 22-04-2016 IPR032712 AsmA-like, C-terminal NHAM_RS14020 6641ba16a33515cb68c92c9cc81fe3d8 1275 Pfam PF05170 AsmA family 8 126 1.4E-10 T 22-04-2016 IPR007844 AsmA NHAM_RS14020 6641ba16a33515cb68c92c9cc81fe3d8 1275 PIRSF PIRSF034039 1 1272 0.0 T 22-04-2016 IPR017023 Uncharacterised conserved protein UCP034039 NHAM_RS08375 674ca383bd8455b841bd639b65f23983 321 PANTHER PTHR30468:SF6 24 320 2.7E-84 T 22-04-2016 NHAM_RS08375 674ca383bd8455b841bd639b65f23983 321 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 194 317 8.2E-45 T 22-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent NHAM_RS08375 674ca383bd8455b841bd639b65f23983 321 PIRSF PIRSF018005 1 321 9.7E-132 T 22-04-2016 IPR017804 Methyltransferase EgtD-like NHAM_RS08375 674ca383bd8455b841bd639b65f23983 321 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 21 318 2.6E-126 T 22-04-2016 IPR017804 Methyltransferase EgtD-like NHAM_RS08375 674ca383bd8455b841bd639b65f23983 321 SUPERFAMILY SSF53335 284 318 8.84E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS08375 674ca383bd8455b841bd639b65f23983 321 SUPERFAMILY SSF53335 28 227 8.84E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS08375 674ca383bd8455b841bd639b65f23983 321 PANTHER PTHR30468 24 320 2.7E-84 T 22-04-2016 NHAM_RS18565 35cccaa518bf6f592406d1340cf11d4e 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 30 134 1.7E-32 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 NHAM_RS18565 35cccaa518bf6f592406d1340cf11d4e 260 PANTHER PTHR11921 19 260 7.1E-181 T 22-04-2016 NHAM_RS18565 35cccaa518bf6f592406d1340cf11d4e 260 Pfam PF13534 4Fe-4S dicluster domain 170 243 4.7E-9 T 22-04-2016 NHAM_RS18565 35cccaa518bf6f592406d1340cf11d4e 260 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NHAM_RS18565 35cccaa518bf6f592406d1340cf11d4e 260 PANTHER PTHR11921:SF27 19 260 7.1E-181 T 22-04-2016 NHAM_RS18565 35cccaa518bf6f592406d1340cf11d4e 260 SUPERFAMILY SSF54292 27 129 4.11E-32 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS18565 35cccaa518bf6f592406d1340cf11d4e 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 252 1.5E-80 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 NHAM_RS18565 35cccaa518bf6f592406d1340cf11d4e 260 SUPERFAMILY SSF46548 131 258 2.62E-37 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 NHAM_RS18565 35cccaa518bf6f592406d1340cf11d4e 260 Gene3D G3DSA:1.10.1060.10 131 259 6.7E-49 T 22-04-2016 NHAM_RS18565 35cccaa518bf6f592406d1340cf11d4e 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NHAM_RS18565 35cccaa518bf6f592406d1340cf11d4e 260 Gene3D G3DSA:3.10.20.30 21 129 6.0E-43 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS01240 e85de59ff4f02ef5c06fb32c9e25c5b7 308 PANTHER PTHR30269:SF15 11 296 9.0E-94 T 22-04-2016 NHAM_RS01240 e85de59ff4f02ef5c06fb32c9e25c5b7 308 PANTHER PTHR30269 11 296 9.0E-94 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NHAM_RS01240 e85de59ff4f02ef5c06fb32c9e25c5b7 308 Pfam PF01925 Sulfite exporter TauE/SafE 18 286 2.1E-48 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NHAM_RS01350 bf1c9f74c8eac638341849e8dd721d7f 75 SUPERFAMILY SSF81333 4 74 9.02E-17 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 NHAM_RS01350 bf1c9f74c8eac638341849e8dd721d7f 75 PRINTS PR00124 ATP synthase C subunit signature 9 28 7.7E-24 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 NHAM_RS01350 bf1c9f74c8eac638341849e8dd721d7f 75 PRINTS PR00124 ATP synthase C subunit signature 30 45 7.7E-24 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 NHAM_RS01350 bf1c9f74c8eac638341849e8dd721d7f 75 PRINTS PR00124 ATP synthase C subunit signature 47 72 7.7E-24 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 NHAM_RS01350 bf1c9f74c8eac638341849e8dd721d7f 75 Pfam PF00137 ATP synthase subunit C 9 71 1.8E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 NHAM_RS01350 bf1c9f74c8eac638341849e8dd721d7f 75 Gene3D G3DSA:1.20.20.10 5 74 1.9E-19 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 NHAM_RS01350 bf1c9f74c8eac638341849e8dd721d7f 75 PANTHER PTHR10031 5 75 5.4E-19 T 22-04-2016 NHAM_RS01350 bf1c9f74c8eac638341849e8dd721d7f 75 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 74 13.554 T 22-04-2016 NHAM_RS05480 245ca4a8c3da23f1e7b32b0fab031512 328 PANTHER PTHR32332 1 328 4.1E-194 T 22-04-2016 NHAM_RS05480 245ca4a8c3da23f1e7b32b0fab031512 328 Gene3D G3DSA:3.20.20.70 2 304 6.1E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS05480 245ca4a8c3da23f1e7b32b0fab031512 328 PANTHER PTHR32332:SF22 1 328 4.1E-194 T 22-04-2016 NHAM_RS05480 245ca4a8c3da23f1e7b32b0fab031512 328 Pfam PF03060 Nitronate monooxygenase 3 308 7.0E-64 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 NHAM_RS05480 245ca4a8c3da23f1e7b32b0fab031512 328 SUPERFAMILY SSF51412 2 318 3.53E-67 T 22-04-2016 NHAM_RS05055 84e098e88c517e32ba88d8a5a1f6059c 475 Pfam PF07995 Glucose / Sorbosone dehydrogenase 56 322 7.6E-34 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 NHAM_RS05055 84e098e88c517e32ba88d8a5a1f6059c 475 PANTHER PTHR19328 46 244 3.3E-80 T 22-04-2016 NHAM_RS05055 84e098e88c517e32ba88d8a5a1f6059c 475 PANTHER PTHR19328 263 418 3.3E-80 T 22-04-2016 NHAM_RS05055 84e098e88c517e32ba88d8a5a1f6059c 475 SUPERFAMILY SSF50952 379 405 2.35E-24 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 NHAM_RS05055 84e098e88c517e32ba88d8a5a1f6059c 475 SUPERFAMILY SSF50952 268 352 2.35E-24 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 NHAM_RS05055 84e098e88c517e32ba88d8a5a1f6059c 475 SUPERFAMILY SSF50952 45 239 2.35E-24 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 NHAM_RS05055 84e098e88c517e32ba88d8a5a1f6059c 475 Gene3D G3DSA:2.120.10.30 21 461 3.3E-82 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NHAM_RS05055 84e098e88c517e32ba88d8a5a1f6059c 475 PANTHER PTHR19328:SF13 46 244 3.3E-80 T 22-04-2016 NHAM_RS05055 84e098e88c517e32ba88d8a5a1f6059c 475 PANTHER PTHR19328:SF13 263 418 3.3E-80 T 22-04-2016 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 SUPERFAMILY SSF47384 231 275 1.84E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 498 5.5E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 PANTHER PTHR24423 225 274 2.2E-54 T 22-04-2016 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 PANTHER PTHR24423 312 499 2.2E-54 T 22-04-2016 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 SMART SM00388 246 348 9.1E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 SMART SM00387 389 500 1.9E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 346 2.4E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 478 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 442 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 497 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 456 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 Gene3D G3DSA:1.10.287.130 239 272 1.2E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 Gene3D G3DSA:1.10.287.130 315 344 1.2E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 SUPERFAMILY SSF55874 346 499 2.1E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 PANTHER PTHR24423:SF439 225 274 2.2E-54 T 22-04-2016 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 PANTHER PTHR24423:SF439 312 499 2.2E-54 T 22-04-2016 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 Pfam PF05227 CHASE3 domain 45 177 5.6E-31 T 22-04-2016 IPR007891 CHASE3 NHAM_RS11150 147454379ef266ec5236e0919141fcbf 509 Gene3D G3DSA:3.30.565.10 348 499 3.5E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 SUPERFAMILY SSF55681 15 214 4.18E-72 T 22-04-2016 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 SUPERFAMILY SSF55681 278 396 4.18E-72 T 22-04-2016 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 Gene3D G3DSA:3.40.50.800 406 517 2.0E-23 T 22-04-2016 IPR004154 Anticodon-binding NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 16 483 4.4E-110 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 Gene3D G3DSA:3.30.930.10 15 207 4.7E-81 T 22-04-2016 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 Gene3D G3DSA:3.30.930.10 299 398 4.7E-81 T 22-04-2016 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 Pfam PF13393 Histidyl-tRNA synthetase 19 390 1.5E-41 T 22-04-2016 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 PANTHER PTHR11476:SF1 498 522 4.9E-169 T 22-04-2016 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 PANTHER PTHR11476:SF1 7 252 4.9E-169 T 22-04-2016 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 PANTHER PTHR11476:SF1 272 479 4.9E-169 T 22-04-2016 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 Pfam PF03129 Anticodon binding domain 421 489 1.8E-6 T 22-04-2016 IPR004154 Anticodon-binding NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 PANTHER PTHR11476 498 522 4.9E-169 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 PANTHER PTHR11476 7 252 4.9E-169 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 PANTHER PTHR11476 272 479 4.9E-169 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 12 497 25.534 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 SUPERFAMILY SSF52954 408 518 2.57E-15 T 22-04-2016 IPR004154 Anticodon-binding NHAM_RS16175 9b88325432d846c46afbbdcfcda2ec54 526 PIRSF PIRSF001549 10 499 8.4E-117 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 NHAM_RS18555 750816f18e8ea75e2a0879f4387183d5 135 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 25 129 3.4E-30 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 NHAM_RS18555 750816f18e8ea75e2a0879f4387183d5 135 Gene3D G3DSA:1.20.1300.10 19 130 7.1E-28 T 22-04-2016 NHAM_RS18555 750816f18e8ea75e2a0879f4387183d5 135 SUPERFAMILY SSF81343 20 131 1.63E-28 T 22-04-2016 NHAM_RS18555 750816f18e8ea75e2a0879f4387183d5 135 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 119 2.2E-15 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 NHAM_RS11245 05a5b8f0d18cbe82520a2aa424132f83 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 3 102 19.795 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NHAM_RS11245 05a5b8f0d18cbe82520a2aa424132f83 102 PANTHER PTHR11434 5 102 8.3E-42 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NHAM_RS11245 05a5b8f0d18cbe82520a2aa424132f83 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 97 4.4E-23 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NHAM_RS00730 c31d05da502db9e13f6381ea14e919d8 135 Gene3D G3DSA:3.40.1350.10 29 133 1.9E-35 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 NHAM_RS00730 c31d05da502db9e13f6381ea14e919d8 135 PANTHER PTHR34039:SF1 18 135 3.2E-37 T 22-04-2016 NHAM_RS00730 c31d05da502db9e13f6381ea14e919d8 135 Hamap MF_00048 UPF0102 protein YraN [yraN]. 22 131 21.912 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 NHAM_RS00730 c31d05da502db9e13f6381ea14e919d8 135 Pfam PF02021 Uncharacterised protein family UPF0102 29 118 1.8E-25 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 NHAM_RS00730 c31d05da502db9e13f6381ea14e919d8 135 PANTHER PTHR34039 18 135 3.2E-37 T 22-04-2016 NHAM_RS00730 c31d05da502db9e13f6381ea14e919d8 135 SUPERFAMILY SSF52980 29 126 3.62E-24 T 22-04-2016 IPR011335 Restriction endonuclease type II-like NHAM_RS00730 c31d05da502db9e13f6381ea14e919d8 135 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 25 119 1.8E-21 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 NHAM_RS16495 12204d71dd07e18cf4b548e40403254e 289 PANTHER PTHR33693 1 286 2.7E-90 T 22-04-2016 NHAM_RS16495 12204d71dd07e18cf4b548e40403254e 289 PANTHER PTHR33693:SF1 1 286 2.7E-90 T 22-04-2016 NHAM_RS16495 12204d71dd07e18cf4b548e40403254e 289 Gene3D G3DSA:3.40.470.10 97 281 1.2E-65 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like NHAM_RS16495 12204d71dd07e18cf4b548e40403254e 289 SMART SM00986 122 272 1.8E-37 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like NHAM_RS16495 12204d71dd07e18cf4b548e40403254e 289 SMART SM00987 122 272 1.8E-37 T 22-04-2016 NHAM_RS16495 12204d71dd07e18cf4b548e40403254e 289 SUPERFAMILY SSF52141 93 279 3.6E-61 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like NHAM_RS16495 12204d71dd07e18cf4b548e40403254e 289 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 109 278 7.9E-62 T 22-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain NHAM_RS16495 12204d71dd07e18cf4b548e40403254e 289 Pfam PF03167 Uracil DNA glycosylase superfamily 124 272 2.1E-45 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like NHAM_RS19995 8ff062a7969c0f108b5bb6ee3397b17c 225 PANTHER PTHR33055:SF3 1 225 3.7E-19 T 22-04-2016 NHAM_RS19995 8ff062a7969c0f108b5bb6ee3397b17c 225 PANTHER PTHR33055 1 225 3.7E-19 T 22-04-2016 NHAM_RS19995 8ff062a7969c0f108b5bb6ee3397b17c 225 Pfam PF01548 Transposase 5 151 1.8E-18 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 SUPERFAMILY SSF48179 201 294 2.04E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 PANTHER PTHR11374 1 436 1.7E-236 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 293 1.5E-38 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 PIRSF PIRSF500134 1 436 5.1E-181 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 SUPERFAMILY SSF52413 303 428 1.16E-38 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 Gene3D G3DSA:3.40.50.720 1 204 5.4E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 Gene3D G3DSA:3.40.50.720 232 435 4.0E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 180 3.5E-65 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 Gene3D G3DSA:1.20.5.100 205 231 1.4E-18 T 22-04-2016 NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 PANTHER PTHR11374:SF18 1 436 1.7E-236 T 22-04-2016 NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 SMART SM00984 317 418 1.1E-47 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 414 7.0E-137 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 SUPERFAMILY SSF51735 1 188 3.7E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 417 2.7E-31 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NHAM_RS14115 392b2ca6bc5e7f788f4581d8b9d3226b 436 PIRSF PIRSF000124 1 433 2.3E-142 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NHAM_RS04815 3f0b9f7c5c079cbe29afd9a7ec98d0e2 149 Pfam PF03061 Thioesterase superfamily 56 129 2.3E-15 T 22-04-2016 IPR006683 Thioesterase domain NHAM_RS04815 3f0b9f7c5c079cbe29afd9a7ec98d0e2 149 PANTHER PTHR12418:SF24 18 136 3.7E-39 T 22-04-2016 NHAM_RS04815 3f0b9f7c5c079cbe29afd9a7ec98d0e2 149 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 28 136 1.6E-21 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain NHAM_RS04815 3f0b9f7c5c079cbe29afd9a7ec98d0e2 149 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 28 138 5.0E-46 T 22-04-2016 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- NHAM_RS04815 3f0b9f7c5c079cbe29afd9a7ec98d0e2 149 SUPERFAMILY SSF54637 7 135 1.5E-31 T 22-04-2016 IPR029069 HotDog domain NHAM_RS04815 3f0b9f7c5c079cbe29afd9a7ec98d0e2 149 PANTHER PTHR12418 18 136 3.7E-39 T 22-04-2016 NHAM_RS04815 3f0b9f7c5c079cbe29afd9a7ec98d0e2 149 Gene3D G3DSA:3.10.129.10 9 145 1.1E-45 T 22-04-2016 IPR029069 HotDog domain NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 Gene3D G3DSA:3.30.479.20 245 286 9.8E-23 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 Gene3D G3DSA:3.30.479.20 150 196 9.8E-23 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 Hamap MF_00050 Elongation factor Ts [tsf]. 1 304 76.933 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 SUPERFAMILY SSF54713 56 144 1.46E-21 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 Gene3D G3DSA:3.30.479.20 57 148 1.0E-16 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 Gene3D G3DSA:1.10.8.10 3 55 9.0E-28 T 22-04-2016 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 SUPERFAMILY SSF46934 4 55 1.13E-19 T 22-04-2016 IPR009060 UBA-like GO:0005515 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 304 1.7E-90 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 PANTHER PTHR11741 1 307 8.0E-140 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 Pfam PF00889 Elongation factor TS 71 287 1.7E-65 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 SUPERFAMILY SSF54713 148 305 7.98E-43 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 Gene3D G3DSA:1.10.286.20 202 244 4.9E-13 T 22-04-2016 NHAM_RS08655 151a038cf7fc552dddc08fa7a8caa60d 307 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 Gene3D G3DSA:1.10.3060.10 621 798 2.6E-26 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 Pfam PF01043 SecA preprotein cross-linking domain 232 345 7.2E-28 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 SMART SM00958 228 345 2.2E-51 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 801 16.804 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 SUPERFAMILY SSF81886 594 800 2.49E-41 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 Gene3D G3DSA:3.40.50.300 404 576 3.4E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 SUPERFAMILY SSF81767 227 355 7.06E-32 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 Pfam PF07517 SecA DEAD-like domain 15 388 7.1E-102 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 SMART SM00957 6 389 1.6E-209 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 PANTHER PTHR30612 16 798 3.4E-229 T 22-04-2016 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 Gene3D G3DSA:3.90.1440.10 232 354 4.4E-33 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 Pfam PF07516 SecA Wing and Scaffold domain 591 798 1.5E-28 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 PRINTS PR00906 SecA protein signature 170 190 3.4E-53 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 PRINTS PR00906 SecA protein signature 326 348 3.4E-53 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 PRINTS PR00906 SecA protein signature 400 413 3.4E-53 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 PRINTS PR00906 SecA protein signature 117 127 3.4E-53 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 PRINTS PR00906 SecA protein signature 101 115 3.4E-53 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 PRINTS PR00906 SecA protein signature 363 380 3.4E-53 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 PRINTS PR00906 SecA protein signature 63 87 3.4E-53 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 Gene3D G3DSA:3.40.50.300 14 228 6.3E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 Gene3D G3DSA:3.40.50.300 356 403 6.3E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 SUPERFAMILY SSF52540 355 402 4.66E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 SUPERFAMILY SSF52540 12 228 4.66E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18685 0d37235586b5cd204cd5c393df5e5e96 803 SUPERFAMILY SSF52540 415 581 2.42E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 SMART SM00434 16 468 1.5E-230 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 SUPERFAMILY SSF101904 510 744 5.36E-48 T 22-04-2016 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 PANTHER PTHR10169:SF48 12 485 4.5E-192 T 22-04-2016 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 PANTHER PTHR10169:SF48 509 617 4.5E-192 T 22-04-2016 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 9 746 31.782 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 PANTHER PTHR10169 12 485 4.5E-192 T 22-04-2016 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 PANTHER PTHR10169 509 617 4.5E-192 T 22-04-2016 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 558 603 1.0 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 665 690 0.0017 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 Gene3D G3DSA:2.120.10.90 507 713 2.0E-28 T 22-04-2016 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 14 745 7.7E-255 T 22-04-2016 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 37 464 2.4E-139 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 Gene3D G3DSA:3.90.199.10 36 241 4.9E-107 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 Gene3D G3DSA:3.90.199.10 340 404 4.9E-107 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 SUPERFAMILY SSF56719 36 484 4.58E-154 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 NHAM_RS11450 03c914632172b5e5bed1de652b9a2d5e 749 Gene3D G3DSA:3.30.1360.40 242 338 7.8E-30 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 PANTHER PTHR11079 21 230 1.3E-55 T 22-04-2016 NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 PANTHER PTHR11079 265 289 1.3E-55 T 22-04-2016 NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 Pfam PF01872 RibD C-terminal domain 165 376 2.2E-41 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 106 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 SUPERFAMILY SSF53597 163 380 7.25E-54 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 Gene3D G3DSA:3.40.430.10 146 380 2.4E-69 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 25 377 3.8E-93 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 Gene3D G3DSA:3.40.140.10 21 145 3.5E-30 T 22-04-2016 NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 PANTHER PTHR11079:SF10 21 230 1.3E-55 T 22-04-2016 NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 PANTHER PTHR11079:SF10 265 289 1.3E-55 T 22-04-2016 NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 SUPERFAMILY SSF53927 21 162 1.78E-44 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 PIRSF PIRSF006769 16 383 7.5E-117 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 NHAM_RS09290 b81e99ca197b9f3dcc4160b7895d770c 383 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 21 116 5.1E-17 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 NHAM_RS11630 5ecad4331e4d96ba8d39edf4f1208d61 433 PANTHER PTHR11647:SF70 1 431 8.6E-138 T 22-04-2016 NHAM_RS11630 5ecad4331e4d96ba8d39edf4f1208d61 433 SUPERFAMILY SSF51338 375 431 4.05E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NHAM_RS11630 5ecad4331e4d96ba8d39edf4f1208d61 433 SUPERFAMILY SSF51338 8 63 4.05E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NHAM_RS11630 5ecad4331e4d96ba8d39edf4f1208d61 433 Gene3D G3DSA:3.20.20.140 79 411 5.6E-89 T 22-04-2016 NHAM_RS11630 5ecad4331e4d96ba8d39edf4f1208d61 433 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 41 431 7.7E-105 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS11630 5ecad4331e4d96ba8d39edf4f1208d61 433 Hamap MF_00220_B Dihydroorotase [pyrC]. 7 433 35.62 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS11630 5ecad4331e4d96ba8d39edf4f1208d61 433 Gene3D G3DSA:2.30.40.10 8 78 1.2E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NHAM_RS11630 5ecad4331e4d96ba8d39edf4f1208d61 433 Pfam PF01979 Amidohydrolase family 60 429 3.1E-22 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NHAM_RS11630 5ecad4331e4d96ba8d39edf4f1208d61 433 PANTHER PTHR11647 1 431 8.6E-138 T 22-04-2016 NHAM_RS11630 5ecad4331e4d96ba8d39edf4f1208d61 433 SUPERFAMILY SSF51556 64 375 1.33E-94 T 22-04-2016 IPR032466 Metal-dependent hydrolase NHAM_RS05705 8ef4c7d6492ebe2d1d3a153a2783d935 390 PANTHER PTHR21152 5 386 4.9E-186 T 22-04-2016 NHAM_RS05705 8ef4c7d6492ebe2d1d3a153a2783d935 390 PIRSF PIRSF000525 19 383 3.4E-51 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 NHAM_RS05705 8ef4c7d6492ebe2d1d3a153a2783d935 390 SUPERFAMILY SSF53383 10 379 4.1E-73 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS05705 8ef4c7d6492ebe2d1d3a153a2783d935 390 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 9 380 3.6E-212 T 22-04-2016 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 NHAM_RS05705 8ef4c7d6492ebe2d1d3a153a2783d935 390 PANTHER PTHR21152:SF20 5 386 4.9E-186 T 22-04-2016 NHAM_RS05705 8ef4c7d6492ebe2d1d3a153a2783d935 390 Gene3D G3DSA:3.40.640.10 22 264 3.5E-47 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 SUPERFAMILY SSF88659 613 715 3.66E-26 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 Pfam PF04546 Sigma-70, non-essential region 176 451 9.0E-46 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 Pfam PF03979 Sigma-70 factor, region 1.1 38 109 1.3E-23 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 507 520 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 SUPERFAMILY SSF88946 273 550 3.4E-98 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 SUPERFAMILY SSF88946 151 214 3.4E-98 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 Pfam PF04539 Sigma-70 region 3 562 637 4.8E-30 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 SUPERFAMILY SSF88659 556 629 6.1E-22 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 PANTHER PTHR30603:SF0 434 716 3.5E-239 T 22-04-2016 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 PANTHER PTHR30603:SF0 21 188 3.5E-239 T 22-04-2016 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 Gene3D G3DSA:1.10.601.10 148 220 2.0E-133 T 22-04-2016 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 Gene3D G3DSA:1.10.601.10 276 552 2.0E-133 T 22-04-2016 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 PANTHER PTHR30603 434 716 3.5E-239 T 22-04-2016 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 PANTHER PTHR30603 21 188 3.5E-239 T 22-04-2016 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 479 704 6.2E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 Pfam PF04542 Sigma-70 region 2 483 552 2.1E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 Gene3D G3DSA:1.10.10.10 645 716 2.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 Pfam PF00140 Sigma-70 factor, region 1.2 134 167 1.5E-13 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 676 702 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 Pfam PF04545 Sigma-70, region 4 651 704 1.6E-18 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 PRINTS PR00046 Major sigma-70 factor signature 676 691 8.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 PRINTS PR00046 Major sigma-70 factor signature 507 520 8.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 PRINTS PR00046 Major sigma-70 factor signature 655 667 8.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 PRINTS PR00046 Major sigma-70 factor signature 691 702 8.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 PRINTS PR00046 Major sigma-70 factor signature 531 539 8.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 25 716 45.096 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 Gene3D G3DSA:1.10.10.10 556 607 2.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS14700 5c1c94b8d4002c2d567b1b8aad817f8b 717 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 479 715 3.9E-120 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 14 477 3.0E-143 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 Gene3D G3DSA:3.40.50.720 239 394 2.0E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 SMART SM00996 14 477 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 15 470 1.4E-176 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 SUPERFAMILY SSF52283 189 236 9.07E-113 T 22-04-2016 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 SUPERFAMILY SSF52283 397 478 9.07E-113 T 22-04-2016 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 SUPERFAMILY SSF52283 12 151 9.07E-113 T 22-04-2016 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 PANTHER PTHR23420 187 478 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 PANTHER PTHR23420 10 149 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 86 100 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 SUPERFAMILY SSF51735 237 396 1.38E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 259 276 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 237 396 4.4E-80 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 PIRSF PIRSF001109 1 478 1.1E-184 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 SMART SM00997 237 396 2.3E-108 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 10 470 47.76 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 Gene3D G3DSA:3.40.50.1480 397 478 1.9E-142 T 22-04-2016 NHAM_RS14100 b35bc3f9b51f80719085efbeed9e9a0b 478 Gene3D G3DSA:3.40.50.1480 14 238 1.9E-142 T 22-04-2016 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 Pfam PF01168 Alanine racemase, N-terminal domain 36 249 9.4E-53 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 Pfam PF00842 Alanine racemase, C-terminal domain 260 391 4.0E-37 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 PANTHER PTHR30511:SF0 33 397 5.9E-97 T 22-04-2016 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 SMART SM01005 260 392 1.3E-62 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 Gene3D G3DSA:2.40.37.10 243 393 2.3E-52 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 59 69 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 SUPERFAMILY SSF50621 253 393 1.15E-43 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 PRINTS PR00992 Alanine racemase signature 90 108 2.2E-43 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 PRINTS PR00992 Alanine racemase signature 276 291 2.2E-43 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 PRINTS PR00992 Alanine racemase signature 374 387 2.2E-43 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 PRINTS PR00992 Alanine racemase signature 293 308 2.2E-43 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 PRINTS PR00992 Alanine racemase signature 151 163 2.2E-43 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 PRINTS PR00992 Alanine racemase signature 222 249 2.2E-43 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 PRINTS PR00992 Alanine racemase signature 184 195 2.2E-43 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 PRINTS PR00992 Alanine racemase signature 54 70 2.2E-43 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 Hamap MF_01201 Alanine racemase. 29 392 29.297 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 SUPERFAMILY SSF51419 36 260 4.71E-59 T 22-04-2016 IPR029066 PLP-binding barrel NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 PANTHER PTHR30511 33 397 5.9E-97 T 22-04-2016 NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 Gene3D G3DSA:3.20.20.10 38 242 5.1E-58 T 22-04-2016 IPR029066 PLP-binding barrel NHAM_RS11670 2620c7733e313fb3d589aea9da37f731 398 TIGRFAM TIGR00492 alr: alanine racemase 33 391 2.0E-73 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS16725 a4b8469c8c2220a64b938b08e8e1647d 211 PANTHER PTHR11079 52 211 4.1E-42 T 22-04-2016 NHAM_RS16725 a4b8469c8c2220a64b938b08e8e1647d 211 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 56 157 2.0E-20 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 NHAM_RS16725 a4b8469c8c2220a64b938b08e8e1647d 211 SUPERFAMILY SSF53927 51 207 1.36E-38 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 NHAM_RS16725 a4b8469c8c2220a64b938b08e8e1647d 211 PANTHER PTHR11079:SF25 52 211 4.1E-42 T 22-04-2016 NHAM_RS16725 a4b8469c8c2220a64b938b08e8e1647d 211 Gene3D G3DSA:3.40.140.10 46 202 3.1E-37 T 22-04-2016 NHAM_RS20435 f88f1f18465981c0e189eb8a185a8448 642 SMART SM00382 434 608 5.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS20435 f88f1f18465981c0e189eb8a185a8448 642 Pfam PF00005 ABC transporter 430 560 4.9E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS20435 f88f1f18465981c0e189eb8a185a8448 642 PANTHER PTHR11384:SF3 3 603 1.1E-217 T 22-04-2016 NHAM_RS20435 f88f1f18465981c0e189eb8a185a8448 642 Gene3D G3DSA:3.40.50.300 408 604 2.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS20435 f88f1f18465981c0e189eb8a185a8448 642 PANTHER PTHR11384 3 603 1.1E-217 T 22-04-2016 NHAM_RS20435 f88f1f18465981c0e189eb8a185a8448 642 SUPERFAMILY SSF52540 404 604 4.32E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS20435 f88f1f18465981c0e189eb8a185a8448 642 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 438 451 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NHAM_RS20435 f88f1f18465981c0e189eb8a185a8448 642 ProSitePatterns PS00211 ABC transporters family signature. 532 546 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS20435 f88f1f18465981c0e189eb8a185a8448 642 Pfam PF06472 ABC transporter transmembrane region 2 67 332 3.9E-41 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS20435 f88f1f18465981c0e189eb8a185a8448 642 SUPERFAMILY SSF90123 63 376 4.97E-22 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS20435 f88f1f18465981c0e189eb8a185a8448 642 Gene3D G3DSA:1.20.1560.10 64 380 2.6E-11 T 22-04-2016 NHAM_RS20365 6d23658c8f9b9e98d789294a7a342d82 283 Gene3D G3DSA:3.40.830.10 1 255 6.8E-85 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NHAM_RS20365 6d23658c8f9b9e98d789294a7a342d82 283 PIRSF PIRSF006157 1 258 3.6E-80 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 NHAM_RS20365 6d23658c8f9b9e98d789294a7a342d82 283 PANTHER PTHR30096:SF0 1 260 4.5E-85 T 22-04-2016 NHAM_RS20365 6d23658c8f9b9e98d789294a7a342d82 283 PANTHER PTHR30096 1 260 4.5E-85 T 22-04-2016 NHAM_RS20365 6d23658c8f9b9e98d789294a7a342d82 283 SUPERFAMILY SSF53213 4 255 1.31E-82 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NHAM_RS20365 6d23658c8f9b9e98d789294a7a342d82 283 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 21 248 1.5E-28 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NHAM_RS01510 0dee7796ffd43a26a6971546b07d9c72 400 Gene3D G3DSA:3.40.50.300 211 340 3.8E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01510 0dee7796ffd43a26a6971546b07d9c72 400 Gene3D G3DSA:3.40.50.300 16 77 3.8E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01510 0dee7796ffd43a26a6971546b07d9c72 400 SUPERFAMILY SSF52540 18 355 1.45E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00470 fd4ef8892d5654199e3ed3c0f7da081f 228 SMART SM00448 5 117 1.1E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS00470 fd4ef8892d5654199e3ed3c0f7da081f 228 SUPERFAMILY SSF52172 3 134 2.28E-36 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS00470 fd4ef8892d5654199e3ed3c0f7da081f 228 PANTHER PTHR26402 5 228 1.6E-87 T 22-04-2016 NHAM_RS00470 fd4ef8892d5654199e3ed3c0f7da081f 228 SMART SM00862 151 226 2.6E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS00470 fd4ef8892d5654199e3ed3c0f7da081f 228 Gene3D G3DSA:1.10.10.10 128 227 6.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS00470 fd4ef8892d5654199e3ed3c0f7da081f 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 3.7E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS00470 fd4ef8892d5654199e3ed3c0f7da081f 228 Gene3D G3DSA:3.40.50.2300 3 127 3.1E-35 T 22-04-2016 NHAM_RS00470 fd4ef8892d5654199e3ed3c0f7da081f 228 Pfam PF00072 Response regulator receiver domain 7 118 7.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS00470 fd4ef8892d5654199e3ed3c0f7da081f 228 SUPERFAMILY SSF46894 127 227 1.73E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS00470 fd4ef8892d5654199e3ed3c0f7da081f 228 PANTHER PTHR26402:SF50 5 228 1.6E-87 T 22-04-2016 NHAM_RS06625 78eb6278176b84fd92d7837c1031917e 326 Gene3D G3DSA:3.90.25.10 176 300 2.6E-27 T 22-04-2016 NHAM_RS06625 78eb6278176b84fd92d7837c1031917e 326 PANTHER PTHR10366 1 326 9.7E-102 T 22-04-2016 NHAM_RS06625 78eb6278176b84fd92d7837c1031917e 326 Gene3D G3DSA:3.40.50.720 3 175 1.7E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06625 78eb6278176b84fd92d7837c1031917e 326 PANTHER PTHR10366:SF469 1 326 9.7E-102 T 22-04-2016 NHAM_RS06625 78eb6278176b84fd92d7837c1031917e 326 SUPERFAMILY SSF51735 2 321 5.85E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06625 78eb6278176b84fd92d7837c1031917e 326 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 320 5.4E-120 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 NHAM_RS06625 78eb6278176b84fd92d7837c1031917e 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 247 1.2E-40 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NHAM_RS11770 666a1bb6c2f6b236df683315e024b078 405 Gene3D G3DSA:3.90.1150.10 258 389 6.1E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS11770 666a1bb6c2f6b236df683315e024b078 405 SUPERFAMILY SSF53383 4 389 8.53E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS11770 666a1bb6c2f6b236df683315e024b078 405 PANTHER PTHR11751 12 389 2.8E-215 T 22-04-2016 NHAM_RS11770 666a1bb6c2f6b236df683315e024b078 405 Pfam PF00155 Aminotransferase class I and II 31 381 1.8E-59 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NHAM_RS11770 666a1bb6c2f6b236df683315e024b078 405 PANTHER PTHR11751:SF302 12 389 2.8E-215 T 22-04-2016 NHAM_RS11770 666a1bb6c2f6b236df683315e024b078 405 Gene3D G3DSA:3.40.640.10 44 257 1.7E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS11770 666a1bb6c2f6b236df683315e024b078 405 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 235 248 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 NHAM_RS06120 b9461c4fe29b454e48bd6a434b3faeb2 272 Gene3D G3DSA:3.40.50.150 5 217 5.8E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS06120 b9461c4fe29b454e48bd6a434b3faeb2 272 PANTHER PTHR10108 10 221 2.9E-15 T 22-04-2016 NHAM_RS06120 b9461c4fe29b454e48bd6a434b3faeb2 272 SUPERFAMILY SSF53335 38 221 1.16E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS06120 b9461c4fe29b454e48bd6a434b3faeb2 272 Pfam PF13847 Methyltransferase domain 52 168 1.7E-14 T 22-04-2016 IPR025714 Methyltransferase domain NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 PANTHER PTHR10799:SF619 51 371 9.0E-88 T 22-04-2016 NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 PANTHER PTHR10799 51 371 9.0E-88 T 22-04-2016 NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 Gene3D G3DSA:3.20.20.450 296 539 2.3E-69 T 22-04-2016 IPR001633 EAL domain NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 SMART SM00052 293 539 3.6E-71 T 22-04-2016 IPR001633 EAL domain NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 SMART SM00091 2 71 0.0016 T 22-04-2016 IPR000014 PAS domain NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 PANTHER PTHR10799 496 515 9.0E-88 T 22-04-2016 NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 122 280 2.9E-34 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 Pfam PF00563 EAL domain 299 534 8.9E-57 T 22-04-2016 IPR001633 EAL domain NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 Pfam PF08448 PAS fold 9 113 4.8E-6 T 22-04-2016 IPR013656 PAS fold-4 NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 SUPERFAMILY SSF141868 298 540 5.75E-66 T 22-04-2016 IPR001633 EAL domain NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 3 119 8.0E-6 T 22-04-2016 IPR000014 PAS domain NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 SUPERFAMILY SSF55785 14 119 2.26E-9 T 22-04-2016 IPR000014 PAS domain NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 Pfam PF00990 Diguanylate cyclase, GGDEF domain 123 277 7.5E-43 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 SMART SM00267 112 283 4.5E-49 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 SUPERFAMILY SSF55073 128 284 1.73E-41 T 22-04-2016 IPR029787 Nucleotide cyclase NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 Gene3D G3DSA:3.30.70.270 124 291 4.4E-46 T 22-04-2016 NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 PANTHER PTHR10799:SF619 496 515 9.0E-88 T 22-04-2016 NHAM_RS16785 c99e70668bb6ce583939ba2ef34d68b9 574 Gene3D G3DSA:3.30.450.20 2 109 8.2E-9 T 22-04-2016 NHAM_RS15530 94aa2a9b01cda62398e329a0683f8b7e 260 Pfam PF05050 Methyltransferase FkbM domain 60 226 1.0E-6 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NHAM_RS15530 94aa2a9b01cda62398e329a0683f8b7e 260 Gene3D G3DSA:3.40.50.150 54 233 6.1E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS15530 94aa2a9b01cda62398e329a0683f8b7e 260 SUPERFAMILY SSF53335 27 228 1.69E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS15530 94aa2a9b01cda62398e329a0683f8b7e 260 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 58 207 2.1E-15 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NHAM_RS08735 8489d6789c03d177710d480802df1250 412 PANTHER PTHR30619 57 406 2.0E-63 T 22-04-2016 NHAM_RS08735 8489d6789c03d177710d480802df1250 412 PANTHER PTHR30619:SF2 57 406 2.0E-63 T 22-04-2016 NHAM_RS08735 8489d6789c03d177710d480802df1250 412 Pfam PF03772 Competence protein 275 406 3.3E-32 T 22-04-2016 IPR004477 ComEC/Rec2-related protein NHAM_RS08735 8489d6789c03d177710d480802df1250 412 Pfam PF13567 Domain of unknown function (DUF4131) 66 230 6.0E-21 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 NHAM_RS07280 5b6dfa32ca8e3f809c00d4b8457da652 148 Pfam PF00877 NlpC/P60 family 20 137 5.4E-6 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS07280 5b6dfa32ca8e3f809c00d4b8457da652 148 TIGRFAM TIGR02219 phage_NlpC_fam: putative phage cell wall peptidase, NlpC/P60 family 11 144 3.3E-70 T 22-04-2016 IPR011929 NlpC/P60 family, putative phage cell wall peptidase NHAM_RS07280 5b6dfa32ca8e3f809c00d4b8457da652 148 Gene3D G3DSA:3.90.1720.10 6 144 1.9E-30 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS07280 5b6dfa32ca8e3f809c00d4b8457da652 148 SUPERFAMILY SSF54001 4 144 1.24E-20 T 22-04-2016 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 Gene3D G3DSA:3.40.640.10 101 374 6.8E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 360 375 2.3E-17 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 90 109 2.3E-17 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 403 422 2.3E-17 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 24 43 2.3E-17 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 128 147 2.3E-17 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 64 83 2.3E-17 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 Gene3D G3DSA:3.90.1150.10 375 482 7.0E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 SUPERFAMILY SSF53383 20 482 1.82E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 PANTHER PTHR11999 13 472 7.6E-133 T 22-04-2016 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 303 324 - T 22-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 PANTHER PTHR11999:SF70 13 472 7.6E-133 T 22-04-2016 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 Gene3D G3DSA:1.20.1340.10 20 97 9.0E-13 T 22-04-2016 NHAM_RS06815 ddb2cbc92dd8f05adabbd4c0129aab9c 497 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 53 422 2.9E-61 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 NHAM_RS13005 2e43b3d8482e8c2ca4db93b5e801c2a4 433 SUPERFAMILY SSF53335 119 432 2.41E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS13005 2e43b3d8482e8c2ca4db93b5e801c2a4 433 Gene3D G3DSA:3.30.70.1170 154 214 5.8E-8 T 22-04-2016 NHAM_RS13005 2e43b3d8482e8c2ca4db93b5e801c2a4 433 PANTHER PTHR22807:SF33 126 431 1.9E-147 T 22-04-2016 NHAM_RS13005 2e43b3d8482e8c2ca4db93b5e801c2a4 433 Gene3D G3DSA:3.40.50.150 216 432 3.2E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS13005 2e43b3d8482e8c2ca4db93b5e801c2a4 433 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 303 315 8.3E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS13005 2e43b3d8482e8c2ca4db93b5e801c2a4 433 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 235 245 8.3E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS13005 2e43b3d8482e8c2ca4db93b5e801c2a4 433 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 414 431 8.3E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS13005 2e43b3d8482e8c2ca4db93b5e801c2a4 433 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 206 220 8.3E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS13005 2e43b3d8482e8c2ca4db93b5e801c2a4 433 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 353 369 8.3E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS13005 2e43b3d8482e8c2ca4db93b5e801c2a4 433 Pfam PF01189 16S rRNA methyltransferase RsmB/F 229 429 4.1E-37 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS13005 2e43b3d8482e8c2ca4db93b5e801c2a4 433 PANTHER PTHR22807 126 431 1.9E-147 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 PANTHER PTHR11709:SF2 171 302 1.5E-49 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 PANTHER PTHR11709:SF2 326 368 1.5E-49 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 PANTHER PTHR11709:SF2 515 600 1.5E-49 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 PANTHER PTHR11709:SF2 95 149 1.5E-49 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 PANTHER PTHR11709:SF2 400 478 1.5E-49 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 PANTHER PTHR11709:SF2 616 716 1.5E-49 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 Gene3D G3DSA:2.60.40.420 79 248 6.7E-20 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 ProSitePatterns PS00080 Multicopper oxidases signature 2. 669 680 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 SUPERFAMILY SSF49503 71 245 3.68E-22 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 Gene3D G3DSA:2.60.40.420 549 688 1.1E-25 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 PANTHER PTHR11709 171 302 1.5E-49 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 PANTHER PTHR11709 326 368 1.5E-49 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 PANTHER PTHR11709 515 600 1.5E-49 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 PANTHER PTHR11709 95 149 1.5E-49 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 PANTHER PTHR11709 400 478 1.5E-49 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 PANTHER PTHR11709 616 716 1.5E-49 T 22-04-2016 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 SUPERFAMILY SSF49503 319 371 2.75E-6 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 SUPERFAMILY SSF49503 655 686 2.75E-6 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 SUPERFAMILY SSF49503 399 418 2.75E-6 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 ProSitePatterns PS00079 Multicopper oxidases signature 1. 664 684 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 Pfam PF07731 Multicopper oxidase 556 686 6.1E-16 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 Pfam PF07732 Multicopper oxidase 172 243 1.1E-9 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 NHAM_RS05200 c64e43e050b4e2b5596a0f83246952c9 716 SUPERFAMILY SSF49503 499 686 2.12E-18 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 SUPERFAMILY SSF55874 856 1017 7.6E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 Gene3D G3DSA:3.30.450.20 632 753 2.1E-9 T 22-04-2016 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 Gene3D G3DSA:3.40.50.2300 1041 1161 2.8E-16 T 22-04-2016 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 SMART SM00448 1044 1157 1.9E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 Pfam PF12860 PAS fold 647 759 2.9E-28 T 22-04-2016 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 Gene3D G3DSA:1.10.287.130 795 861 1.5E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 Gene3D G3DSA:3.30.565.10 869 1022 3.0E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 PANTHER PTHR24423:SF439 639 753 5.2E-189 T 22-04-2016 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 PANTHER PTHR24423:SF439 779 1169 5.2E-189 T 22-04-2016 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 PANTHER PTHR24423:SF439 216 235 5.2E-189 T 22-04-2016 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 PANTHER PTHR24423:SF439 12 62 5.2E-189 T 22-04-2016 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 SMART SM00387 909 1019 3.5E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 PANTHER PTHR24423 639 753 5.2E-189 T 22-04-2016 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 PANTHER PTHR24423 779 1169 5.2E-189 T 22-04-2016 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 PANTHER PTHR24423 216 235 5.2E-189 T 22-04-2016 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 PANTHER PTHR24423 12 62 5.2E-189 T 22-04-2016 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 SMART SM00388 800 865 1.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 SUPERFAMILY SSF47384 783 865 1.02E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 SUPERFAMILY SSF52172 1041 1163 4.41E-16 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 910 1016 2.5E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 PRINTS PR00344 Bacterial sensor protein C-terminal signature 963 973 5.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 PRINTS PR00344 Bacterial sensor protein C-terminal signature 979 997 5.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 PRINTS PR00344 Bacterial sensor protein C-terminal signature 945 959 5.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1003 1016 5.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 Pfam PF00512 His Kinase A (phospho-acceptor) domain 800 865 4.1E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 Pfam PF00072 Response regulator receiver domain 1046 1157 1.0E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 SUPERFAMILY SSF55785 632 753 5.23E-7 T 22-04-2016 IPR000014 PAS domain NHAM_RS01380 e06f5c2c740dab7e7216c254a0f18980 1169 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 428 448 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 PANTHER PTHR13370:SF7 375 458 1.6E-22 T 22-04-2016 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 PANTHER PTHR13370 375 458 1.6E-22 T 22-04-2016 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 Pfam PF01555 DNA methylase 116 448 9.8E-41 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 SUPERFAMILY SSF53335 167 299 3.79E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 SUPERFAMILY SSF53335 84 136 3.79E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 SUPERFAMILY SSF53335 378 466 3.79E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 116 128 5.2E-17 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 405 427 5.2E-17 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 179 198 5.2E-17 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 428 442 5.2E-17 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 Gene3D G3DSA:3.40.50.150 92 274 2.3E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 Gene3D G3DSA:3.40.50.150 362 527 2.3E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 PANTHER PTHR13370 93 125 1.6E-22 T 22-04-2016 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 PANTHER PTHR13370 157 333 1.6E-22 T 22-04-2016 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 PANTHER PTHR13370:SF7 93 125 1.6E-22 T 22-04-2016 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 PANTHER PTHR13370:SF7 157 333 1.6E-22 T 22-04-2016 NHAM_RS03030 22428fdc28a29bd0e07dbe49c4ae9ff0 657 PIRSF PIRSF015855 3 656 9.7E-173 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 NHAM_RS03900 3b1c30c1778ac3015dc4539d2f4d58b8 404 SUPERFAMILY SSF56645 16 250 5.1E-78 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NHAM_RS03900 3b1c30c1778ac3015dc4539d2f4d58b8 404 PANTHER PTHR10909:SF307 1 404 8.4E-263 T 22-04-2016 NHAM_RS03900 3b1c30c1778ac3015dc4539d2f4d58b8 404 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 147 159 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NHAM_RS03900 3b1c30c1778ac3015dc4539d2f4d58b8 404 PANTHER PTHR10909 1 404 8.4E-263 T 22-04-2016 NHAM_RS03900 3b1c30c1778ac3015dc4539d2f4d58b8 404 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 356 375 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NHAM_RS03900 3b1c30c1778ac3015dc4539d2f4d58b8 404 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 145 238 5.6E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NHAM_RS03900 3b1c30c1778ac3015dc4539d2f4d58b8 404 Gene3D G3DSA:2.40.110.10 144 238 1.0E-32 T 22-04-2016 NHAM_RS03900 3b1c30c1778ac3015dc4539d2f4d58b8 404 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 29 141 1.1E-32 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NHAM_RS03900 3b1c30c1778ac3015dc4539d2f4d58b8 404 Gene3D G3DSA:1.20.140.10 239 399 1.9E-40 T 22-04-2016 NHAM_RS03900 3b1c30c1778ac3015dc4539d2f4d58b8 404 Gene3D G3DSA:1.10.540.10 12 143 1.9E-41 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NHAM_RS03900 3b1c30c1778ac3015dc4539d2f4d58b8 404 SUPERFAMILY SSF47203 254 401 5.8E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS03900 3b1c30c1778ac3015dc4539d2f4d58b8 404 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 253 397 7.9E-27 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS16045 3166923a16e47a8d62abc9f967c24892 336 Pfam PF01292 Prokaryotic cytochrome b561 121 297 5.2E-23 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NHAM_RS16045 3166923a16e47a8d62abc9f967c24892 336 Gene3D G3DSA:1.20.950.20 115 325 2.0E-62 T 22-04-2016 NHAM_RS16045 3166923a16e47a8d62abc9f967c24892 336 PANTHER PTHR30074 28 336 9.3E-135 T 22-04-2016 NHAM_RS16045 3166923a16e47a8d62abc9f967c24892 336 PANTHER PTHR30074:SF2 28 336 9.3E-135 T 22-04-2016 NHAM_RS16045 3166923a16e47a8d62abc9f967c24892 336 SUPERFAMILY SSF81342 115 324 1.18E-42 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 NHAM_RS16045 3166923a16e47a8d62abc9f967c24892 336 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 119 318 4.9E-47 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 NHAM_RS18730 82a06a6861c33f61c783b357fe4734d3 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 77 95 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 NHAM_RS18730 82a06a6861c33f61c783b357fe4734d3 319 SUPERFAMILY SSF51395 1 289 1.57E-71 T 22-04-2016 NHAM_RS18730 82a06a6861c33f61c783b357fe4734d3 319 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 311 47.425 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 NHAM_RS18730 82a06a6861c33f61c783b357fe4734d3 319 PANTHER PTHR11082 1 319 8.0E-138 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NHAM_RS18730 82a06a6861c33f61c783b357fe4734d3 319 Pfam PF01207 Dihydrouridine synthase (Dus) 1 297 7.9E-81 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NHAM_RS18730 82a06a6861c33f61c783b357fe4734d3 319 PANTHER PTHR11082:SF29 1 319 8.0E-138 T 22-04-2016 NHAM_RS18730 82a06a6861c33f61c783b357fe4734d3 319 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 310 3.1E-127 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 NHAM_RS18730 82a06a6861c33f61c783b357fe4734d3 319 PIRSF PIRSF006621 1 312 3.1E-70 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NHAM_RS18730 82a06a6861c33f61c783b357fe4734d3 319 Gene3D G3DSA:3.20.20.70 1 237 4.1E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS00415 4a23243d5809925145c63c725d3c73cc 65 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 12 65 27.475 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 NHAM_RS00415 4a23243d5809925145c63c725d3c73cc 65 SUPERFAMILY SSF158997 12 64 5.23E-20 T 22-04-2016 NHAM_RS00415 4a23243d5809925145c63c725d3c73cc 65 Gene3D G3DSA:2.20.25.10 19 65 7.7E-25 T 22-04-2016 NHAM_RS00415 4a23243d5809925145c63c725d3c73cc 65 PANTHER PTHR33505 6 65 2.9E-25 T 22-04-2016 NHAM_RS00415 4a23243d5809925145c63c725d3c73cc 65 Pfam PF03966 Trm112p-like protein 13 52 3.3E-10 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 PANTHER PTHR10947 2 816 4.9E-251 T 22-04-2016 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 SUPERFAMILY SSF50249 36 205 3.14E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 SMART SM00896 723 816 5.6E-40 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 SUPERFAMILY SSF56037 203 402 8.63E-74 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 Pfam PF01588 Putative tRNA binding domain 46 152 4.2E-20 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 Gene3D G3DSA:3.30.70.380 725 816 2.0E-27 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 2 816 1.2E-197 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 Gene3D G3DSA:3.50.40.10 207 399 4.8E-82 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 SUPERFAMILY SSF54991 720 816 5.89E-26 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 Gene3D G3DSA:2.40.50.140 40 160 4.2E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 Pfam PF03483 B3/4 domain 220 391 1.8E-63 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 SMART SM00873 219 391 5.5E-84 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 PANTHER PTHR10947:SF0 2 816 4.9E-251 T 22-04-2016 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 Gene3D G3DSA:3.30.56.20 407 479 4.3E-19 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 SMART SM00874 407 475 2.2E-18 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 Gene3D G3DSA:3.30.56.10 2 38 5.9E-23 T 22-04-2016 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 Gene3D G3DSA:3.30.56.10 162 189 5.9E-23 T 22-04-2016 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 Pfam PF03484 tRNA synthetase B5 domain 410 474 3.0E-13 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 SUPERFAMILY SSF46955 408 479 7.05E-14 T 22-04-2016 IPR009061 Putative DNA-binding domain NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 Pfam PF03147 Ferredoxin-fold anticodon binding domain 724 816 8.9E-26 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 SUPERFAMILY SSF55681 471 707 8.95E-38 T 22-04-2016 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 810 39.962 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NHAM_RS00360 61a5b01df7aaca846662cce04f4a1ddf 817 Gene3D G3DSA:3.30.930.10 494 708 4.3E-51 T 22-04-2016 NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 Pfam PF03764 Elongation factor G, domain IV 451 568 5.1E-41 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 Pfam PF00679 Elongation factor G C-terminus 571 660 3.4E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 SUPERFAMILY SSF52540 1 265 3.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 Gene3D G3DSA:3.30.230.10 456 568 7.4E-46 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 Gene3D G3DSA:3.30.70.870 378 451 8.5E-24 T 22-04-2016 NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 SUPERFAMILY SSF54980 574 664 2.35E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 SMART SM00889 452 569 1.4E-61 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 Gene3D G3DSA:2.40.30.10 281 365 2.0E-14 T 22-04-2016 NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 SUPERFAMILY SSF54980 378 453 1.12E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 PANTHER PTHR23115:SF98 1 165 4.3E-229 T 22-04-2016 NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 Pfam PF14492 Elongation Factor G, domain II 378 448 2.1E-20 T 22-04-2016 IPR009022 Elongation factor G, III-V domain NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 SUPERFAMILY SSF54211 451 570 3.54E-39 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 Pfam PF00009 Elongation factor Tu GTP binding domain 1 263 3.0E-28 T 22-04-2016 NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 Gene3D G3DSA:3.40.50.300 1 265 4.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 PANTHER PTHR23115 1 165 4.3E-229 T 22-04-2016 NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 Gene3D G3DSA:3.30.70.240 569 666 1.1E-17 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 SMART SM00838 571 661 2.3E-14 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 PANTHER PTHR23115 239 665 4.3E-229 T 22-04-2016 NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 PANTHER PTHR23115:SF98 239 665 4.3E-229 T 22-04-2016 NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 142 2.4E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NHAM_RS05645 69fd3faa198339d4607ac26b220ddd32 669 SUPERFAMILY SSF50447 279 365 1.2E-12 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain NHAM_RS24045 53b86a8bf5442e1958b706a9476df1e4 756 Pfam PF08707 Primase C terminal 2 (PriCT-2) 235 308 5.2E-13 T 22-04-2016 IPR014819 Primase, C-terminal 2 GO:0016817 NHAM_RS24045 53b86a8bf5442e1958b706a9476df1e4 756 SUPERFAMILY SSF56747 65 220 8.99E-11 T 22-04-2016 NHAM_RS24045 53b86a8bf5442e1958b706a9476df1e4 756 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 58 204 9.5E-16 T 22-04-2016 IPR015330 DNA primase/polymerase, bifunctional, N-terminal NHAM_RS24045 53b86a8bf5442e1958b706a9476df1e4 756 SMART SM00943 52 210 4.1E-35 T 22-04-2016 IPR015330 DNA primase/polymerase, bifunctional, N-terminal NHAM_RS24045 53b86a8bf5442e1958b706a9476df1e4 756 Pfam PF05272 Virulence-associated protein E 464 589 4.5E-6 T 22-04-2016 IPR007936 Virulence-associated E NHAM_RS24045 53b86a8bf5442e1958b706a9476df1e4 756 SUPERFAMILY SSF52540 452 584 5.93E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 SMART SM00912 17 129 8.9E-38 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 SMART SM00912 1273 1385 8.3E-35 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 SUPERFAMILY SSF51126 1291 1585 7.85E-32 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 Pfam PF05860 haemagglutination activity domain 35 129 2.4E-21 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 Pfam PF05860 haemagglutination activity domain 1292 1385 3.0E-21 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 PANTHER PTHR12338:SF6 16 254 4.6E-74 T 22-04-2016 NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 Gene3D G3DSA:2.160.20.10 1313 1523 3.8E-17 T 22-04-2016 IPR012334 Pectin lyase fold NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 Gene3D G3DSA:2.160.20.10 1557 1577 3.8E-17 T 22-04-2016 IPR012334 Pectin lyase fold NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 Gene3D G3DSA:2.160.20.10 39 303 4.4E-21 T 22-04-2016 IPR012334 Pectin lyase fold NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 SUPERFAMILY SSF51126 16 312 9.1E-48 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 1307 1382 7.7E-24 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 51 126 2.5E-22 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal NHAM_RS04845 9b0091d8106ceca79e9b30fb1a51436f 2292 PANTHER PTHR12338 16 254 4.6E-74 T 22-04-2016 NHAM_RS11970 41ad523066414e1283c09cdd458e665f 295 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 3 295 1.3E-64 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 NHAM_RS11970 41ad523066414e1283c09cdd458e665f 295 Pfam PF03755 YicC-like family, N-terminal region 4 158 9.7E-36 T 22-04-2016 IPR013527 YicC-like, N-terminal NHAM_RS11970 41ad523066414e1283c09cdd458e665f 295 PANTHER PTHR30636 2 295 2.5E-88 T 22-04-2016 NHAM_RS11970 41ad523066414e1283c09cdd458e665f 295 Pfam PF08340 Domain of unknown function (DUF1732) 211 295 3.0E-33 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 NHAM_RS01715 5ce6c99356b3c9c182e88d3a661127ef 281 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 197 257 3.5E-5 T 22-04-2016 IPR001357 BRCT domain NHAM_RS01715 5ce6c99356b3c9c182e88d3a661127ef 281 Gene3D G3DSA:3.40.50.10190 195 281 1.6E-14 T 22-04-2016 IPR001357 BRCT domain NHAM_RS01715 5ce6c99356b3c9c182e88d3a661127ef 281 SUPERFAMILY SSF53098 5 168 9.93E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS01715 5ce6c99356b3c9c182e88d3a661127ef 281 SMART SM00479 5 169 4.3E-18 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III NHAM_RS01715 5ce6c99356b3c9c182e88d3a661127ef 281 PANTHER PTHR30231 1 178 6.7E-32 T 22-04-2016 NHAM_RS01715 5ce6c99356b3c9c182e88d3a661127ef 281 Pfam PF00929 Exonuclease 7 160 1.3E-17 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III NHAM_RS01715 5ce6c99356b3c9c182e88d3a661127ef 281 Gene3D G3DSA:3.30.420.10 3 166 3.1E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS01715 5ce6c99356b3c9c182e88d3a661127ef 281 SUPERFAMILY SSF52113 195 280 4.58E-9 T 22-04-2016 IPR001357 BRCT domain NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 SUPERFAMILY SSF54752 280 337 4.45E-20 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 SUPERFAMILY SSF52540 18 279 1.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 Hamap MF_00268 Protein RecA [recA]. 16 341 51.576 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 PANTHER PTHR22942 1 347 5.8E-201 T 22-04-2016 NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 ProSitePatterns PS00321 recA signature. 225 233 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 15 336 1.6E-172 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 Gene3D G3DSA:3.40.50.300 43 279 4.9E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 PANTHER PTHR22942:SF1 1 347 5.8E-201 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 SMART SM00382 69 240 5.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 Pfam PF00154 recA bacterial DNA recombination protein 18 280 5.4E-148 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 Gene3D G3DSA:3.30.250.10 280 337 9.6E-25 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 PRINTS PR00142 RecA protein signature 255 284 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 PRINTS PR00142 RecA protein signature 177 206 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 PRINTS PR00142 RecA protein signature 105 134 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 PRINTS PR00142 RecA protein signature 309 326 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 PRINTS PR00142 RecA protein signature 222 250 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NHAM_RS08265 9079f389bbdceb25a78dd02de05bcd58 362 PRINTS PR00142 RecA protein signature 139 168 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NHAM_RS03240 b9c963ebd01bdbad0da6555f1612d9c2 226 PANTHER PTHR30400:SF0 1 224 1.1E-88 T 22-04-2016 NHAM_RS03240 b9c963ebd01bdbad0da6555f1612d9c2 226 SUPERFAMILY SSF53955 41 206 4.22E-48 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS03240 b9c963ebd01bdbad0da6555f1612d9c2 226 Gene3D G3DSA:1.10.3810.10 45 196 5.0E-49 T 22-04-2016 NHAM_RS03240 b9c963ebd01bdbad0da6555f1612d9c2 226 PANTHER PTHR30400 1 224 1.1E-88 T 22-04-2016 NHAM_RS03240 b9c963ebd01bdbad0da6555f1612d9c2 226 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 17 205 8.9E-59 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 NHAM_RS03240 b9c963ebd01bdbad0da6555f1612d9c2 226 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 1 217 38.499 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 NHAM_RS03240 b9c963ebd01bdbad0da6555f1612d9c2 226 Pfam PF00912 Transglycosylase 44 192 4.4E-45 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 NHAM_RS19005 8f930641cc0fd44e69a6c1cfec8da59f 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 25 1.0E-6 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS19005 8f930641cc0fd44e69a6c1cfec8da59f 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.491 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS19005 8f930641cc0fd44e69a6c1cfec8da59f 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 5.1E-22 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS19005 8f930641cc0fd44e69a6c1cfec8da59f 44 Pfam PF00468 Ribosomal protein L34 2 44 4.9E-22 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS19005 8f930641cc0fd44e69a6c1cfec8da59f 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS19005 8f930641cc0fd44e69a6c1cfec8da59f 44 PANTHER PTHR14503 2 44 5.4E-19 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 TIGRFAM TIGR01393 lepA: elongation factor 4 15 609 1.3E-295 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 Pfam PF03144 Elongation factor Tu domain 2 219 289 4.9E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 Pfam PF00009 Elongation factor Tu GTP binding domain 15 195 3.0E-52 T 22-04-2016 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 PANTHER PTHR23115:SF175 411 609 0.0 T 22-04-2016 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 PANTHER PTHR23115:SF175 2 387 0.0 T 22-04-2016 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 Hamap MF_00071 Elongation factor 4 [lepA]. 1 610 304.478 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 PANTHER PTHR23115 411 609 0.0 T 22-04-2016 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 PANTHER PTHR23115 2 387 0.0 T 22-04-2016 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 Gene3D G3DSA:3.30.70.240 415 503 3.3E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 Gene3D G3DSA:3.30.70.870 307 383 9.8E-25 T 22-04-2016 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 SMART SM00838 412 499 0.0028 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 Gene3D G3DSA:2.40.30.10 207 303 2.7E-24 T 22-04-2016 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 Pfam PF06421 GTP-binding protein LepA C-terminus 501 607 2.4E-50 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 187 8.2E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 SUPERFAMILY SSF52540 10 248 1.48E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 Pfam PF00679 Elongation factor G C-terminus 413 499 2.0E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 SUPERFAMILY SSF54980 413 507 2.35E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 PRINTS PR00315 GTP-binding elongation factor signature 88 98 4.8E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 PRINTS PR00315 GTP-binding elongation factor signature 18 31 4.8E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 PRINTS PR00315 GTP-binding elongation factor signature 140 149 4.8E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 PRINTS PR00315 GTP-binding elongation factor signature 104 115 4.8E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 PRINTS PR00315 GTP-binding elongation factor signature 63 71 4.8E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 Gene3D G3DSA:3.40.50.300 14 206 4.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 SUPERFAMILY SSF54980 307 384 3.6E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain NHAM_RS02280 05907a5f8c876db9e80f959a889a856d 610 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site NHAM_RS14710 3df787ec3d62c4705588e563339c557f 269 Pfam PF05013 N-formylglutamate amidohydrolase 30 237 2.5E-46 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase NHAM_RS14710 3df787ec3d62c4705588e563339c557f 269 PIRSF PIRSF029730 13 267 1.6E-90 T 22-04-2016 IPR011227 Uncharacterised conserved protein UCP029730 NHAM_RS14710 3df787ec3d62c4705588e563339c557f 269 Gene3D G3DSA:3.40.630.40 24 260 1.1E-81 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NHAM_RS14710 3df787ec3d62c4705588e563339c557f 269 SUPERFAMILY SSF53187 19 261 1.26E-75 T 22-04-2016 NHAM_RS03680 1dea8fdcf4aec627dcd0bca55f1ce4c1 359 Gene3D G3DSA:3.20.20.70 6 353 1.2E-117 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS03680 1dea8fdcf4aec627dcd0bca55f1ce4c1 359 PANTHER PTHR22893 8 354 1.8E-157 T 22-04-2016 NHAM_RS03680 1dea8fdcf4aec627dcd0bca55f1ce4c1 359 SUPERFAMILY SSF51395 5 354 1.2E-110 T 22-04-2016 NHAM_RS03680 1dea8fdcf4aec627dcd0bca55f1ce4c1 359 PANTHER PTHR22893:SF14 8 354 1.8E-157 T 22-04-2016 NHAM_RS03680 1dea8fdcf4aec627dcd0bca55f1ce4c1 359 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 332 3.9E-80 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 NHAM_RS07030 9b0349a611e9104516af81c2ae1e9f72 93 PANTHER PTHR33217 24 88 7.2E-13 T 22-04-2016 NHAM_RS07030 9b0349a611e9104516af81c2ae1e9f72 93 Pfam PF00872 Transposase, Mutator family 18 66 5.0E-12 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS13435 2c8e2b052d25cee73d0e796f3d92e44b 142 SUPERFAMILY SSF82649 2 138 9.94E-45 T 22-04-2016 NHAM_RS13435 2c8e2b052d25cee73d0e796f3d92e44b 142 PANTHER PTHR12735:SF11 2 139 8.2E-47 T 22-04-2016 NHAM_RS13435 2c8e2b052d25cee73d0e796f3d92e44b 142 Pfam PF02657 Fe-S metabolism associated domain 8 132 1.3E-44 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 NHAM_RS13435 2c8e2b052d25cee73d0e796f3d92e44b 142 PANTHER PTHR12735 2 139 8.2E-47 T 22-04-2016 NHAM_RS13435 2c8e2b052d25cee73d0e796f3d92e44b 142 Gene3D G3DSA:3.90.1010.10 2 139 8.0E-52 T 22-04-2016 NHAM_RS02720 2e96572de11ff03224d2cf1ae4d9f5e1 160 PANTHER PTHR33603:SF1 1 159 5.4E-48 T 22-04-2016 NHAM_RS02720 2e96572de11ff03224d2cf1ae4d9f5e1 160 PIRSF PIRSF004505 1 159 6.5E-46 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS02720 2e96572de11ff03224d2cf1ae4d9f5e1 160 SUPERFAMILY SSF75217 1 157 2.81E-46 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases NHAM_RS02720 2e96572de11ff03224d2cf1ae4d9f5e1 160 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 1.2E-44 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS02720 2e96572de11ff03224d2cf1ae4d9f5e1 160 Gene3D G3DSA:3.40.1280.10 1 159 7.8E-54 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NHAM_RS02720 2e96572de11ff03224d2cf1ae4d9f5e1 160 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 27.355 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS02720 2e96572de11ff03224d2cf1ae4d9f5e1 160 PANTHER PTHR33603 1 159 5.4E-48 T 22-04-2016 NHAM_RS17905 a83e85a548293e5a5442899729cf6eb7 185 PANTHER PTHR33877 1 185 2.8E-81 T 22-04-2016 NHAM_RS17905 a83e85a548293e5a5442899729cf6eb7 185 PANTHER PTHR33877:SF2 1 185 2.8E-81 T 22-04-2016 NHAM_RS17905 a83e85a548293e5a5442899729cf6eb7 185 SMART SM00507 81 131 7.9E-13 T 22-04-2016 IPR003615 HNH nuclease NHAM_RS17905 a83e85a548293e5a5442899729cf6eb7 185 Pfam PF14279 HNH endonuclease 94 143 9.3E-16 T 22-04-2016 IPR029471 HNH endonuclease 5 NHAM_RS18050 a7c0673656a175a8ba16eb81c719e3bc 236 Gene3D G3DSA:1.10.357.10 70 208 2.0E-29 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NHAM_RS18050 a7c0673656a175a8ba16eb81c719e3bc 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 1.4E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS18050 a7c0673656a175a8ba16eb81c719e3bc 236 PANTHER PTHR30328 1 229 1.9E-69 T 22-04-2016 NHAM_RS18050 a7c0673656a175a8ba16eb81c719e3bc 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.2E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS18050 a7c0673656a175a8ba16eb81c719e3bc 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.2E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS18050 a7c0673656a175a8ba16eb81c719e3bc 236 PANTHER PTHR30328:SF6 1 229 1.9E-69 T 22-04-2016 NHAM_RS18050 a7c0673656a175a8ba16eb81c719e3bc 236 SUPERFAMILY SSF48498 91 208 3.41E-21 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NHAM_RS18050 a7c0673656a175a8ba16eb81c719e3bc 236 Pfam PF13305 WHG domain 98 182 2.3E-13 T 22-04-2016 IPR025996 WHG domain NHAM_RS18050 a7c0673656a175a8ba16eb81c719e3bc 236 SUPERFAMILY SSF46689 12 87 7.56E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS18050 a7c0673656a175a8ba16eb81c719e3bc 236 Gene3D G3DSA:1.10.10.60 8 69 3.0E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 Gene3D G3DSA:1.10.3650.10 363 443 5.5E-21 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 362 441 1.6E-17 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 Gene3D G3DSA:3.30.70.20 450 478 1.4E-62 T 22-04-2016 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 Gene3D G3DSA:3.30.70.20 241 362 1.4E-62 T 22-04-2016 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 483 3.8E-193 T 22-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 Pfam PF13247 4Fe-4S dicluster domain 181 275 7.5E-37 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 PANTHER PTHR11938 1 31 1.9E-95 T 22-04-2016 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 PANTHER PTHR11938 136 145 1.9E-95 T 22-04-2016 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 PANTHER PTHR11938 175 293 1.9E-95 T 22-04-2016 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 Gene3D G3DSA:3.30.70.20 169 200 4.4E-11 T 22-04-2016 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 Gene3D G3DSA:3.30.70.20 10 26 4.4E-11 T 22-04-2016 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 Gene3D G3DSA:3.30.70.20 201 240 5.9E-23 T 22-04-2016 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 PANTHER PTHR11938:SF8 1 31 1.9E-95 T 22-04-2016 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 PANTHER PTHR11938:SF8 136 145 1.9E-95 T 22-04-2016 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 PANTHER PTHR11938:SF8 175 293 1.9E-95 T 22-04-2016 NHAM_RS16850 c85facad5aeffe1d92e1859868280157 513 SUPERFAMILY SSF54862 1 483 3.98E-137 T 22-04-2016 NHAM_RS18815 7d65d82a49ab8c876eca861538b664ab 178 PANTHER PTHR34309:SF1 11 174 1.7E-29 T 22-04-2016 NHAM_RS18815 7d65d82a49ab8c876eca861538b664ab 178 SUPERFAMILY SSF143744 37 173 4.05E-35 T 22-04-2016 NHAM_RS18815 7d65d82a49ab8c876eca861538b664ab 178 Pfam PF03928 Haem-degrading 47 169 9.7E-27 T 22-04-2016 IPR005624 Haem-degrading NHAM_RS18815 7d65d82a49ab8c876eca861538b664ab 178 PANTHER PTHR34309 11 174 1.7E-29 T 22-04-2016 NHAM_RS09310 b6a8e577aff17eb7ecad9d30d7b84e61 323 Gene3D G3DSA:3.90.650.10 144 323 9.8E-43 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NHAM_RS09310 b6a8e577aff17eb7ecad9d30d7b84e61 323 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 300 1.8E-12 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NHAM_RS09310 b6a8e577aff17eb7ecad9d30d7b84e61 323 PIRSF PIRSF005303 3 323 4.9E-79 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 NHAM_RS09310 b6a8e577aff17eb7ecad9d30d7b84e61 323 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 137 2.9E-22 T 22-04-2016 IPR016188 PurM-like, N-terminal domain NHAM_RS09310 b6a8e577aff17eb7ecad9d30d7b84e61 323 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 5 323 6.0E-94 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 NHAM_RS09310 b6a8e577aff17eb7ecad9d30d7b84e61 323 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 320 28.384 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 NHAM_RS09310 b6a8e577aff17eb7ecad9d30d7b84e61 323 Gene3D G3DSA:3.30.1330.10 4 139 1.1E-38 T 22-04-2016 IPR016188 PurM-like, N-terminal domain NHAM_RS09310 b6a8e577aff17eb7ecad9d30d7b84e61 323 PANTHER PTHR30270 4 323 1.5E-102 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 NHAM_RS09310 b6a8e577aff17eb7ecad9d30d7b84e61 323 PANTHER PTHR30270:SF0 4 323 1.5E-102 T 22-04-2016 NHAM_RS09310 b6a8e577aff17eb7ecad9d30d7b84e61 323 SUPERFAMILY SSF55326 6 137 5.23E-31 T 22-04-2016 NHAM_RS09310 b6a8e577aff17eb7ecad9d30d7b84e61 323 SUPERFAMILY SSF56042 143 306 1.44E-36 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NHAM_RS18320 7ea1bd5b107a092dc31ec92b891a1df1 181 Gene3D G3DSA:1.10.10.10 100 159 5.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS18320 7ea1bd5b107a092dc31ec92b891a1df1 181 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 32 63 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS18320 7ea1bd5b107a092dc31ec92b891a1df1 181 SUPERFAMILY SSF88659 99 158 2.4E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS18320 7ea1bd5b107a092dc31ec92b891a1df1 181 Pfam PF08281 Sigma-70, region 4 103 155 5.4E-16 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS18320 7ea1bd5b107a092dc31ec92b891a1df1 181 PANTHER PTHR30173 11 159 1.3E-46 T 22-04-2016 NHAM_RS18320 7ea1bd5b107a092dc31ec92b891a1df1 181 SUPERFAMILY SSF88946 8 85 1.18E-20 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS18320 7ea1bd5b107a092dc31ec92b891a1df1 181 Gene3D G3DSA:1.10.1740.10 7 78 4.5E-22 T 22-04-2016 NHAM_RS18320 7ea1bd5b107a092dc31ec92b891a1df1 181 Pfam PF04542 Sigma-70 region 2 15 77 6.0E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS18320 7ea1bd5b107a092dc31ec92b891a1df1 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 156 1.8E-25 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS18320 7ea1bd5b107a092dc31ec92b891a1df1 181 PANTHER PTHR30173:SF6 11 159 1.3E-46 T 22-04-2016 NHAM_RS00825 e9f34df1fc54acbf7cc86b6338b71a89 449 PANTHER PTHR21090 10 448 3.1E-155 T 22-04-2016 NHAM_RS00825 e9f34df1fc54acbf7cc86b6338b71a89 449 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 20 446 5.1E-123 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS00825 e9f34df1fc54acbf7cc86b6338b71a89 449 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 15 439 7.8E-102 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 NHAM_RS00825 e9f34df1fc54acbf7cc86b6338b71a89 449 ProSitePatterns PS00104 EPSP synthase signature 1. 99 113 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS00825 e9f34df1fc54acbf7cc86b6338b71a89 449 Gene3D G3DSA:3.65.10.10 214 447 5.2E-56 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 NHAM_RS00825 e9f34df1fc54acbf7cc86b6338b71a89 449 SUPERFAMILY SSF55205 14 447 6.38E-121 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 NHAM_RS00825 e9f34df1fc54acbf7cc86b6338b71a89 449 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 16 447 31.098 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS00825 e9f34df1fc54acbf7cc86b6338b71a89 449 PIRSF PIRSF000505 6 449 5.3E-131 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS00825 e9f34df1fc54acbf7cc86b6338b71a89 449 PANTHER PTHR21090:SF5 10 448 3.1E-155 T 22-04-2016 NHAM_RS00825 e9f34df1fc54acbf7cc86b6338b71a89 449 Gene3D G3DSA:3.65.10.10 26 213 1.4E-46 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 NHAM_RS14040 81de7e1200e1b32f972da7647849004f 306 Pfam PF00005 ABC transporter 21 163 1.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS14040 81de7e1200e1b32f972da7647849004f 306 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS14040 81de7e1200e1b32f972da7647849004f 306 Gene3D G3DSA:3.40.50.300 3 228 6.8E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14040 81de7e1200e1b32f972da7647849004f 306 PANTHER PTHR24220:SF305 6 225 2.6E-115 T 22-04-2016 NHAM_RS14040 81de7e1200e1b32f972da7647849004f 306 SMART SM00382 30 211 8.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS14040 81de7e1200e1b32f972da7647849004f 306 SUPERFAMILY SSF52540 2 226 6.45E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14040 81de7e1200e1b32f972da7647849004f 306 PANTHER PTHR24220 6 225 2.6E-115 T 22-04-2016 NHAM_RS11505 435f7bc95796f933369226dd76ec0fa6 226 PANTHER PTHR33693 13 226 1.9E-77 T 22-04-2016 NHAM_RS11505 435f7bc95796f933369226dd76ec0fa6 226 PANTHER PTHR33693:SF2 13 226 1.9E-77 T 22-04-2016 NHAM_RS11505 435f7bc95796f933369226dd76ec0fa6 226 Pfam PF03167 Uracil DNA glycosylase superfamily 41 209 4.5E-28 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like NHAM_RS11505 435f7bc95796f933369226dd76ec0fa6 226 Gene3D G3DSA:3.40.470.10 13 211 5.5E-54 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like NHAM_RS11505 435f7bc95796f933369226dd76ec0fa6 226 SMART SM00987 41 207 7.2E-30 T 22-04-2016 NHAM_RS11505 435f7bc95796f933369226dd76ec0fa6 226 SMART SM00986 41 207 7.2E-30 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like NHAM_RS11505 435f7bc95796f933369226dd76ec0fa6 226 SUPERFAMILY SSF52141 15 213 9.16E-46 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PANTHER PTHR24322 175 207 5.1E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PANTHER PTHR24322 28 158 5.1E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 30 263 6.7E-51 T 22-04-2016 NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PANTHER PTHR24322:SF264 175 207 5.1E-62 T 22-04-2016 NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PANTHER PTHR24322:SF264 28 158 5.1E-62 T 22-04-2016 NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 213 2.5E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 2.5E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 194 2.5E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 25 42 2.5E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 2.5E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 2.5E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 Gene3D G3DSA:3.40.50.720 23 263 2.7E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 162 190 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 1.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 194 1.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 1.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03955 adea7204437c26ab086bce1be56e02c0 264 SUPERFAMILY SSF51735 24 264 3.04E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11995 65f067247125fbd2cee8942a6da7bc3d 319 Gene3D G3DSA:3.30.70.250 128 199 2.6E-25 T 22-04-2016 NHAM_RS11995 65f067247125fbd2cee8942a6da7bc3d 319 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 303 1.7E-36 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain NHAM_RS11995 65f067247125fbd2cee8942a6da7bc3d 319 Pfam PF00698 Acyl transferase domain 5 269 2.1E-35 T 22-04-2016 IPR014043 Acyl transferase NHAM_RS11995 65f067247125fbd2cee8942a6da7bc3d 319 PANTHER PTHR10982 4 317 1.5E-140 T 22-04-2016 NHAM_RS11995 65f067247125fbd2cee8942a6da7bc3d 319 PIRSF PIRSF000446 1 314 1.3E-95 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 NHAM_RS11995 65f067247125fbd2cee8942a6da7bc3d 319 SUPERFAMILY SSF52151 3 125 1.26E-76 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NHAM_RS11995 65f067247125fbd2cee8942a6da7bc3d 319 SUPERFAMILY SSF52151 193 315 1.26E-76 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NHAM_RS11995 65f067247125fbd2cee8942a6da7bc3d 319 Gene3D G3DSA:3.40.366.10 200 300 2.4E-69 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 NHAM_RS11995 65f067247125fbd2cee8942a6da7bc3d 319 Gene3D G3DSA:3.40.366.10 2 125 2.4E-69 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 NHAM_RS11995 65f067247125fbd2cee8942a6da7bc3d 319 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 293 3.6E-98 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 NHAM_RS11995 65f067247125fbd2cee8942a6da7bc3d 319 SUPERFAMILY SSF55048 133 200 1.05E-15 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 NHAM_RS19075 e1c07504a7816b482acf453f6673125f 753 PANTHER PTHR32552 101 753 5.7E-187 T 22-04-2016 NHAM_RS19075 e1c07504a7816b482acf453f6673125f 753 PANTHER PTHR32552 13 42 5.7E-187 T 22-04-2016 NHAM_RS19075 e1c07504a7816b482acf453f6673125f 753 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 736 753 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site NHAM_RS19075 e1c07504a7816b482acf453f6673125f 753 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 111 753 1.2E-105 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NHAM_RS19075 e1c07504a7816b482acf453f6673125f 753 Gene3D G3DSA:2.170.130.10 32 45 7.4E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS19075 e1c07504a7816b482acf453f6673125f 753 Gene3D G3DSA:2.170.130.10 104 222 7.4E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS19075 e1c07504a7816b482acf453f6673125f 753 Pfam PF07715 TonB-dependent Receptor Plug Domain 109 208 4.3E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS19075 e1c07504a7816b482acf453f6673125f 753 SUPERFAMILY SSF56935 101 753 2.31E-97 T 22-04-2016 NHAM_RS19075 e1c07504a7816b482acf453f6673125f 753 PANTHER PTHR32552:SF14 101 753 5.7E-187 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 NHAM_RS19075 e1c07504a7816b482acf453f6673125f 753 PANTHER PTHR32552:SF14 13 42 5.7E-187 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 NHAM_RS19075 e1c07504a7816b482acf453f6673125f 753 Gene3D G3DSA:2.40.170.20 230 753 1.4E-95 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS14840 c0795d4cdde5c3950cd98740e41b5b15 65 PANTHER PTHR34472 1 65 4.2E-24 T 22-04-2016 NHAM_RS14840 c0795d4cdde5c3950cd98740e41b5b15 65 SUPERFAMILY SSF54285 2 64 6.25E-18 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NHAM_RS14840 c0795d4cdde5c3950cd98740e41b5b15 65 Pfam PF02597 ThiS family 3 65 1.2E-17 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 NHAM_RS14840 c0795d4cdde5c3950cd98740e41b5b15 65 Gene3D G3DSA:3.10.20.30 1 65 6.8E-25 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS14840 c0795d4cdde5c3950cd98740e41b5b15 65 PANTHER PTHR34472:SF1 1 65 4.2E-24 T 22-04-2016 NHAM_RS14840 c0795d4cdde5c3950cd98740e41b5b15 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 9.5E-23 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis NHAM_RS09585 b379fbc3e6ae495f8e5685226a556ffb 360 Gene3D G3DSA:1.10.150.280 78 118 4.2E-4 T 22-04-2016 NHAM_RS09585 b379fbc3e6ae495f8e5685226a556ffb 360 Pfam PF01336 OB-fold nucleic acid binding domain 224 294 1.3E-7 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 NHAM_RS09585 b379fbc3e6ae495f8e5685226a556ffb 360 PANTHER PTHR32294:SF4 16 297 1.1E-83 T 22-04-2016 NHAM_RS09585 b379fbc3e6ae495f8e5685226a556ffb 360 PANTHER PTHR32294 16 297 1.1E-83 T 22-04-2016 NHAM_RS09585 b379fbc3e6ae495f8e5685226a556ffb 360 Pfam PF14579 Helix-hairpin-helix motif 46 137 4.6E-23 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 SUPERFAMILY SSF47384 227 300 1.8E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 SUPERFAMILY SSF55874 308 451 4.19E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 SMART SM00304 190 243 4.4E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 Gene3D G3DSA:3.30.565.10 311 452 4.6E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 SMART SM00387 347 453 1.0E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 2.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 2.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 2.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 2.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 300 8.7E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 Gene3D G3DSA:1.10.287.130 235 296 3.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 SMART SM00388 244 302 9.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 452 1.2E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 PANTHER PTHR24423 2 13 5.8E-60 T 22-04-2016 NHAM_RS16880 0033a655a5cb52f8115622ba8281e808 465 PANTHER PTHR24423 184 452 5.8E-60 T 22-04-2016 NHAM_RS10170 da937debd63afd6c3b28800416b39228 884 SUPERFAMILY SSF52540 395 504 1.59E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10170 da937debd63afd6c3b28800416b39228 884 SUPERFAMILY SSF52540 198 366 1.59E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10170 da937debd63afd6c3b28800416b39228 884 Pfam PF12705 PD-(D/E)XK nuclease superfamily 575 788 2.8E-18 T 22-04-2016 NHAM_RS10165 87e66c46f7f708541f6f2f7ed9274ba6 504 Pfam PF13604 AAA domain 6 168 4.7E-9 T 22-04-2016 NHAM_RS10165 87e66c46f7f708541f6f2f7ed9274ba6 504 Gene3D G3DSA:3.40.50.300 168 222 3.3E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10165 87e66c46f7f708541f6f2f7ed9274ba6 504 Gene3D G3DSA:3.40.50.300 367 496 3.3E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10165 87e66c46f7f708541f6f2f7ed9274ba6 504 SUPERFAMILY SSF52540 15 496 1.57E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10165 87e66c46f7f708541f6f2f7ed9274ba6 504 Gene3D G3DSA:3.40.50.300 13 167 5.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10165 87e66c46f7f708541f6f2f7ed9274ba6 504 Pfam PF13538 UvrD-like helicase C-terminal domain 444 492 3.2E-10 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain NHAM_RS15240 bbaf6ac46757fdb2c7df9e4c9ade4084 814 SUPERFAMILY SSF103515 533 814 2.09E-54 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS15240 bbaf6ac46757fdb2c7df9e4c9ade4084 814 SUPERFAMILY SSF103515 452 479 2.09E-54 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS15240 bbaf6ac46757fdb2c7df9e4c9ade4084 814 SUPERFAMILY SSF51126 11 384 1.41E-11 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS15240 bbaf6ac46757fdb2c7df9e4c9ade4084 814 Gene3D G3DSA:2.40.128.130 528 814 5.2E-47 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS15240 bbaf6ac46757fdb2c7df9e4c9ade4084 814 Pfam PF03797 Autotransporter beta-domain 536 800 1.7E-50 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS15240 bbaf6ac46757fdb2c7df9e4c9ade4084 814 SMART SM00869 537 804 1.6E-47 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS15240 bbaf6ac46757fdb2c7df9e4c9ade4084 814 Pfam PF12951 Passenger-associated-transport-repeat 238 268 5.4E-10 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS15240 bbaf6ac46757fdb2c7df9e4c9ade4084 814 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 237 269 1.7E-11 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS06675 50169e482ad43dd5a6eda7f4ce990566 140 SMART SM00754 25 140 3.1E-40 T 22-04-2016 IPR010895 CHRD NHAM_RS06675 50169e482ad43dd5a6eda7f4ce990566 140 Pfam PF07452 CHRD domain 28 138 1.4E-27 T 22-04-2016 IPR010895 CHRD NHAM_RS11710 136ae542896eb9a54133c76c20cde8d8 193 PANTHER PTHR34989 19 193 1.8E-33 T 22-04-2016 NHAM_RS11710 136ae542896eb9a54133c76c20cde8d8 193 Pfam PF03729 Short repeat of unknown function (DUF308) 85 153 2.6E-12 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane NHAM_RS11710 136ae542896eb9a54133c76c20cde8d8 193 Pfam PF03729 Short repeat of unknown function (DUF308) 149 190 0.014 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane NHAM_RS11710 136ae542896eb9a54133c76c20cde8d8 193 Pfam PF03729 Short repeat of unknown function (DUF308) 29 97 1.4E-13 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane NHAM_RS11710 136ae542896eb9a54133c76c20cde8d8 193 PANTHER PTHR34989:SF1 19 193 1.8E-33 T 22-04-2016 NHAM_RS01815 403410c591e6339e6d2813d06419643b 254 Pfam PF01145 SPFH domain / Band 7 family 26 194 4.6E-34 T 22-04-2016 IPR001107 Band 7 domain NHAM_RS01815 403410c591e6339e6d2813d06419643b 254 SUPERFAMILY SSF117892 52 185 3.27E-44 T 22-04-2016 IPR001107 Band 7 domain NHAM_RS01815 403410c591e6339e6d2813d06419643b 254 SMART SM00244 21 178 7.9E-63 T 22-04-2016 IPR001107 Band 7 domain NHAM_RS01815 403410c591e6339e6d2813d06419643b 254 PANTHER PTHR10264:SF60 1 243 1.1E-111 T 22-04-2016 NHAM_RS01815 403410c591e6339e6d2813d06419643b 254 PRINTS PR00721 Stomatin signature 28 50 9.1E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 NHAM_RS01815 403410c591e6339e6d2813d06419643b 254 PRINTS PR00721 Stomatin signature 154 172 9.1E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 NHAM_RS01815 403410c591e6339e6d2813d06419643b 254 PRINTS PR00721 Stomatin signature 130 153 9.1E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 NHAM_RS01815 403410c591e6339e6d2813d06419643b 254 PRINTS PR00721 Stomatin signature 110 127 9.1E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 NHAM_RS01815 403410c591e6339e6d2813d06419643b 254 PRINTS PR00721 Stomatin signature 198 221 9.1E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 NHAM_RS01815 403410c591e6339e6d2813d06419643b 254 PRINTS PR00721 Stomatin signature 173 194 9.1E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 NHAM_RS01815 403410c591e6339e6d2813d06419643b 254 PRINTS PR00721 Stomatin signature 75 96 9.1E-60 T 22-04-2016 IPR001972 Stomatin family GO:0016020 NHAM_RS01815 403410c591e6339e6d2813d06419643b 254 PANTHER PTHR10264 1 243 1.1E-111 T 22-04-2016 IPR001972 Stomatin family GO:0016020 NHAM_RS23850 38355f87165bbff9ae096cf52e05eeb6 227 Pfam PF13508 Acetyltransferase (GNAT) domain 135 192 3.2E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS23850 38355f87165bbff9ae096cf52e05eeb6 227 Gene3D G3DSA:3.40.630.30 14 211 6.9E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS23850 38355f87165bbff9ae096cf52e05eeb6 227 SUPERFAMILY SSF55729 126 203 2.83E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS23850 38355f87165bbff9ae096cf52e05eeb6 227 SUPERFAMILY SSF55729 16 91 2.83E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS23850 38355f87165bbff9ae096cf52e05eeb6 227 PANTHER PTHR23091 132 197 1.7E-12 T 22-04-2016 NHAM_RS23850 38355f87165bbff9ae096cf52e05eeb6 227 PANTHER PTHR23091 10 93 1.7E-12 T 22-04-2016 NHAM_RS15500 72b19e4f0e5fc6b4b29176234d5c794e 319 PANTHER PTHR10366 6 319 1.7E-96 T 22-04-2016 NHAM_RS15500 72b19e4f0e5fc6b4b29176234d5c794e 319 Gene3D G3DSA:3.90.25.10 169 318 2.8E-32 T 22-04-2016 NHAM_RS15500 72b19e4f0e5fc6b4b29176234d5c794e 319 PANTHER PTHR10366:SF39 6 319 1.7E-96 T 22-04-2016 NHAM_RS15500 72b19e4f0e5fc6b4b29176234d5c794e 319 Gene3D G3DSA:3.40.50.720 4 168 2.2E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15500 72b19e4f0e5fc6b4b29176234d5c794e 319 SUPERFAMILY SSF51735 6 318 4.51E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15500 72b19e4f0e5fc6b4b29176234d5c794e 319 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 6 318 3.2E-114 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 NHAM_RS15500 72b19e4f0e5fc6b4b29176234d5c794e 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 250 1.9E-50 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NHAM_RS01840 b4a2ea416d614ef4ea3f66878197e168 410 Pfam PF13458 Periplasmic binding protein 40 395 4.9E-58 T 22-04-2016 IPR028081 Leucine-binding protein domain NHAM_RS01840 b4a2ea416d614ef4ea3f66878197e168 410 Gene3D G3DSA:3.40.50.2300 36 162 8.9E-29 T 22-04-2016 NHAM_RS01840 b4a2ea416d614ef4ea3f66878197e168 410 Gene3D G3DSA:3.40.50.2300 321 364 8.9E-29 T 22-04-2016 NHAM_RS01840 b4a2ea416d614ef4ea3f66878197e168 410 Gene3D G3DSA:3.40.50.2300 163 320 3.8E-20 T 22-04-2016 NHAM_RS01840 b4a2ea416d614ef4ea3f66878197e168 410 SUPERFAMILY SSF53822 40 401 2.39E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I NHAM_RS01840 b4a2ea416d614ef4ea3f66878197e168 410 PANTHER PTHR30483:SF11 1 404 6.4E-198 T 22-04-2016 NHAM_RS01840 b4a2ea416d614ef4ea3f66878197e168 410 PANTHER PTHR30483 1 404 6.4E-198 T 22-04-2016 NHAM_RS11820 f912946155a88c538966ffb3a728f65a 392 PANTHER PTHR13789:SF209 1 384 1.6E-183 T 22-04-2016 NHAM_RS11820 f912946155a88c538966ffb3a728f65a 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 139 154 9.0E-11 T 22-04-2016 NHAM_RS11820 f912946155a88c538966ffb3a728f65a 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 264 279 9.0E-11 T 22-04-2016 NHAM_RS11820 f912946155a88c538966ffb3a728f65a 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 295 9.0E-11 T 22-04-2016 NHAM_RS11820 f912946155a88c538966ffb3a728f65a 392 Pfam PF01494 FAD binding domain 1 328 2.2E-48 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 NHAM_RS11820 f912946155a88c538966ffb3a728f65a 392 PANTHER PTHR13789 1 384 1.6E-183 T 22-04-2016 NHAM_RS11820 f912946155a88c538966ffb3a728f65a 392 Gene3D G3DSA:3.50.50.60 2 165 1.2E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS11820 f912946155a88c538966ffb3a728f65a 392 Gene3D G3DSA:3.50.50.60 252 328 1.2E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS11820 f912946155a88c538966ffb3a728f65a 392 SUPERFAMILY SSF51905 251 336 7.42E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS11820 f912946155a88c538966ffb3a728f65a 392 SUPERFAMILY SSF51905 2 160 7.42E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13925 fa4867ff5122ae5e9539538288d2c0cd 235 Gene3D G3DSA:3.90.79.10 95 158 1.9E-4 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS13925 fa4867ff5122ae5e9539538288d2c0cd 235 SUPERFAMILY SSF55811 90 159 7.58E-6 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS18665 9525d9b206502099cf034b623e5f6a44 821 Pfam PF00593 TonB dependent receptor 562 800 7.3E-32 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS18665 9525d9b206502099cf034b623e5f6a44 821 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 121 802 6.9E-78 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NHAM_RS18665 9525d9b206502099cf034b623e5f6a44 821 PANTHER PTHR32552:SF8 113 802 2.0E-142 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 NHAM_RS18665 9525d9b206502099cf034b623e5f6a44 821 SUPERFAMILY SSF56935 114 802 8.35E-121 T 22-04-2016 NHAM_RS18665 9525d9b206502099cf034b623e5f6a44 821 Gene3D G3DSA:2.40.170.20 234 802 6.1E-129 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS18665 9525d9b206502099cf034b623e5f6a44 821 Gene3D G3DSA:2.170.130.10 44 60 1.2E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS18665 9525d9b206502099cf034b623e5f6a44 821 Gene3D G3DSA:2.170.130.10 113 227 1.2E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS18665 9525d9b206502099cf034b623e5f6a44 821 Pfam PF07715 TonB-dependent Receptor Plug Domain 119 217 1.3E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS18665 9525d9b206502099cf034b623e5f6a44 821 PANTHER PTHR32552 113 802 2.0E-142 T 22-04-2016 NHAM_RS15325 c834813f3fb8a83857c5d73941e85964 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 1.0E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS15325 c834813f3fb8a83857c5d73941e85964 230 PANTHER PTHR26402 6 229 1.3E-79 T 22-04-2016 NHAM_RS15325 c834813f3fb8a83857c5d73941e85964 230 Gene3D G3DSA:3.40.50.2300 5 127 2.7E-34 T 22-04-2016 NHAM_RS15325 c834813f3fb8a83857c5d73941e85964 230 Pfam PF00072 Response regulator receiver domain 8 116 1.8E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS15325 c834813f3fb8a83857c5d73941e85964 230 PANTHER PTHR26402:SF578 6 229 1.3E-79 T 22-04-2016 NHAM_RS15325 c834813f3fb8a83857c5d73941e85964 230 Gene3D G3DSA:1.10.10.10 128 229 1.6E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS15325 c834813f3fb8a83857c5d73941e85964 230 SUPERFAMILY SSF52172 5 172 1.77E-35 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS15325 c834813f3fb8a83857c5d73941e85964 230 SMART SM00862 151 227 2.0E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS15325 c834813f3fb8a83857c5d73941e85964 230 SMART SM00448 6 116 8.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS04295 729817e885ecfa74ef8f0f5ecbbd59e5 439 Pfam PF14065 Protein of unknown function (DUF4255) 9 209 1.6E-49 T 22-04-2016 IPR025351 Protein of unknown function DUF4255 NHAM_RS11515 835b70ec72669efd58d66aa7ac35db2e 157 PANTHER PTHR30308:SF2 1 157 3.2E-80 T 22-04-2016 NHAM_RS11515 835b70ec72669efd58d66aa7ac35db2e 157 ProSitePatterns PS01317 SsrA-binding protein. 30 42 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site NHAM_RS11515 835b70ec72669efd58d66aa7ac35db2e 157 PANTHER PTHR30308 1 157 3.2E-80 T 22-04-2016 NHAM_RS11515 835b70ec72669efd58d66aa7ac35db2e 157 Pfam PF01668 SmpB protein 11 75 1.2E-29 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 NHAM_RS11515 835b70ec72669efd58d66aa7ac35db2e 157 Gene3D G3DSA:2.40.280.10 10 131 5.0E-53 T 22-04-2016 IPR023620 Small protein B NHAM_RS11515 835b70ec72669efd58d66aa7ac35db2e 157 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 136 1.0E-59 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 NHAM_RS11515 835b70ec72669efd58d66aa7ac35db2e 157 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 153 1.4E-56 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 NHAM_RS11515 835b70ec72669efd58d66aa7ac35db2e 157 Hamap MF_00023 SsrA-binding protein [smpB]. 1 157 74.157 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 NHAM_RS11515 835b70ec72669efd58d66aa7ac35db2e 157 SUPERFAMILY SSF74982 5 136 1.57E-51 T 22-04-2016 IPR023620 Small protein B NHAM_RS00365 30d7a77b62e003d9d273455560702d2b 368 PANTHER PTHR11538 92 350 5.4E-100 T 22-04-2016 NHAM_RS00365 30d7a77b62e003d9d273455560702d2b 368 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.1E-21 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NHAM_RS00365 30d7a77b62e003d9d273455560702d2b 368 Pfam PF01409 tRNA synthetases class II core domain (F) 92 351 1.1E-101 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 NHAM_RS00365 30d7a77b62e003d9d273455560702d2b 368 SUPERFAMILY SSF55681 102 353 1.35E-76 T 22-04-2016 NHAM_RS00365 30d7a77b62e003d9d273455560702d2b 368 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 352 44.859 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 NHAM_RS00365 30d7a77b62e003d9d273455560702d2b 368 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 351 5.0E-102 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NHAM_RS00365 30d7a77b62e003d9d273455560702d2b 368 Gene3D G3DSA:3.30.930.10 9 352 1.3E-124 T 22-04-2016 NHAM_RS00365 30d7a77b62e003d9d273455560702d2b 368 SUPERFAMILY SSF46589 12 99 3.56E-20 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 NHAM_RS08280 88ffee512c3a9976572fbf0d98bb718f 388 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 284 379 2.6E-22 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NHAM_RS08280 88ffee512c3a9976572fbf0d98bb718f 388 PANTHER PTHR13847 12 382 1.3E-189 T 22-04-2016 NHAM_RS08280 88ffee512c3a9976572fbf0d98bb718f 388 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 12 383 4.6E-95 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NHAM_RS08280 88ffee512c3a9976572fbf0d98bb718f 388 PIRSF PIRSF006487 1 388 2.1E-71 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NHAM_RS08280 88ffee512c3a9976572fbf0d98bb718f 388 Gene3D G3DSA:3.30.1360.120 157 248 3.9E-51 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 NHAM_RS08280 88ffee512c3a9976572fbf0d98bb718f 388 Gene3D G3DSA:3.30.1360.120 12 64 3.9E-51 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 NHAM_RS08280 88ffee512c3a9976572fbf0d98bb718f 388 Gene3D G3DSA:3.30.70.1400 65 155 3.4E-26 T 22-04-2016 NHAM_RS08280 88ffee512c3a9976572fbf0d98bb718f 388 PANTHER PTHR13847:SF209 12 382 1.3E-189 T 22-04-2016 NHAM_RS08280 88ffee512c3a9976572fbf0d98bb718f 388 SUPERFAMILY SSF103025 12 299 5.18E-76 T 22-04-2016 NHAM_RS08280 88ffee512c3a9976572fbf0d98bb718f 388 SUPERFAMILY SSF101790 292 388 4.91E-26 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain NHAM_RS08280 88ffee512c3a9976572fbf0d98bb718f 388 Pfam PF01571 Aminomethyltransferase folate-binding domain 17 270 5.6E-76 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal NHAM_RS08280 88ffee512c3a9976572fbf0d98bb718f 388 Gene3D G3DSA:2.40.30.110 301 388 2.3E-26 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NHAM_RS19090 581177debcb77d81165ce474d51a7eb5 106 Pfam PF11804 Protein of unknown function (DUF3325) 9 102 1.5E-16 T 22-04-2016 IPR021762 Protein of unknown function DUF3325 NHAM_RS03080 91cfbe08d50df26300f655c4a99764a9 575 PANTHER PTHR37937:SF1 16 494 4.0E-17 T 22-04-2016 NHAM_RS03080 91cfbe08d50df26300f655c4a99764a9 575 SUPERFAMILY SSF52540 38 476 1.42E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03080 91cfbe08d50df26300f655c4a99764a9 575 Gene3D G3DSA:3.40.50.300 284 473 7.1E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03080 91cfbe08d50df26300f655c4a99764a9 575 Gene3D G3DSA:3.40.50.300 67 134 7.1E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03080 91cfbe08d50df26300f655c4a99764a9 575 PANTHER PTHR37937 16 494 4.0E-17 T 22-04-2016 NHAM_RS03080 91cfbe08d50df26300f655c4a99764a9 575 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 64 475 2.2E-56 T 22-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 NHAM_RS16300 67f97e2a67e64bab2b991f470ca21513 244 Pfam PF04028 Domain of unknown function (DUF374) 68 142 1.1E-24 T 22-04-2016 IPR007172 Domain of unknown function DUF374 NHAM_RS16300 67f97e2a67e64bab2b991f470ca21513 244 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 27 139 3.0E-50 T 22-04-2016 IPR007172 Domain of unknown function DUF374 NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 Gene3D G3DSA:3.30.450.20 10 114 8.0E-26 T 22-04-2016 NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 Gene3D G3DSA:3.30.450.20 133 220 6.0E-18 T 22-04-2016 NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 PANTHER PTHR24422:SF12 1 220 4.6E-102 T 22-04-2016 NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 Pfam PF08447 PAS fold 23 108 3.9E-17 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 Pfam PF08447 PAS fold 144 220 9.1E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 SUPERFAMILY SSF55785 11 113 4.01E-26 T 22-04-2016 IPR000014 PAS domain NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 218 5.3E-9 T 22-04-2016 IPR000014 PAS domain NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 116 4.0E-17 T 22-04-2016 IPR000014 PAS domain NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 SUPERFAMILY SSF55785 133 220 1.06E-19 T 22-04-2016 IPR000014 PAS domain NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 SMART SM00091 2 68 2.3 T 22-04-2016 IPR000014 PAS domain NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 SMART SM00091 122 190 4.3 T 22-04-2016 IPR000014 PAS domain NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 SMART SM00086 73 115 3.8E-5 T 22-04-2016 IPR001610 PAC motif NHAM_RS24240 4c06d8a4c339598d10a32ad863e6b77e 220 PANTHER PTHR24422 1 220 4.6E-102 T 22-04-2016 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 85 1.2E-29 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 PIRSF PIRSF000349 1 199 7.5E-80 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 Gene3D G3DSA:1.10.287.990 20 85 2.2E-23 T 22-04-2016 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 PANTHER PTHR11404 1 198 1.3E-107 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 SUPERFAMILY SSF54719 88 197 1.44E-42 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 193 2.0E-35 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 2.4E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.4E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 PRINTS PR01703 Manganese superoxide dismutase signature 158 170 2.4E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.4E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 PRINTS PR01703 Manganese superoxide dismutase signature 122 130 2.4E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 SUPERFAMILY SSF46609 1 86 2.49E-33 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 160 167 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS17610 241b33c79542ea2e60fb98ffb8e1db99 199 PANTHER PTHR11404:SF8 1 198 1.3E-107 T 22-04-2016 NHAM_RS11765 b468d111713801276c0e95c3c66095cc 440 Gene3D G3DSA:3.30.360.10 151 300 3.3E-55 T 22-04-2016 NHAM_RS11765 b468d111713801276c0e95c3c66095cc 440 Pfam PF00742 Homoserine dehydrogenase 139 316 4.5E-63 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 NHAM_RS11765 b468d111713801276c0e95c3c66095cc 440 SUPERFAMILY SSF55347 139 304 3.92E-51 T 22-04-2016 NHAM_RS11765 b468d111713801276c0e95c3c66095cc 440 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 185 207 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 NHAM_RS11765 b468d111713801276c0e95c3c66095cc 440 SUPERFAMILY SSF51735 3 160 2.54E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11765 b468d111713801276c0e95c3c66095cc 440 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 131 8.5E-17 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 NHAM_RS11765 b468d111713801276c0e95c3c66095cc 440 PIRSF PIRSF000098 2 440 1.0E-158 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 NHAM_RS11765 b468d111713801276c0e95c3c66095cc 440 PANTHER PTHR21499 1 369 1.9E-129 T 22-04-2016 NHAM_RS11765 b468d111713801276c0e95c3c66095cc 440 Gene3D G3DSA:3.40.50.720 4 150 1.9E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11765 b468d111713801276c0e95c3c66095cc 440 PANTHER PTHR21499:SF2 1 369 1.9E-129 T 22-04-2016 NHAM_RS19085 a0e2d6807085a1db291853a43ccb0aea 519 PANTHER PTHR34219 1 504 7.3E-102 T 22-04-2016 NHAM_RS19085 a0e2d6807085a1db291853a43ccb0aea 519 Pfam PF03929 PepSY-associated TM region 12 359 2.4E-48 T 22-04-2016 IPR005625 PepSY-associated TM protein NHAM_RS19085 a0e2d6807085a1db291853a43ccb0aea 519 PANTHER PTHR34219:SF4 1 504 7.3E-102 T 22-04-2016 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 Pfam PF00580 UvrD/REP helicase N-terminal domain 16 466 9.7E-52 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 SUPERFAMILY SSF52540 117 170 1.43E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 SUPERFAMILY SSF52540 347 816 1.43E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 SUPERFAMILY SSF52540 22 78 1.43E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 SUPERFAMILY SSF52540 860 886 1.43E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 Pfam PF13361 UvrD-like helicase C-terminal domain 560 881 5.4E-20 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 PANTHER PTHR11070 322 536 7.1E-138 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 PANTHER PTHR11070 117 202 7.1E-138 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 PANTHER PTHR11070 559 824 7.1E-138 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 PANTHER PTHR11070 15 87 7.1E-138 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 PANTHER PTHR11070 859 934 7.1E-138 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 Gene3D G3DSA:1.10.486.10 631 767 5.3E-9 T 22-04-2016 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 Gene3D G3DSA:3.40.50.300 125 187 1.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 Gene3D G3DSA:3.40.50.300 357 467 1.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 Gene3D G3DSA:3.40.50.300 16 74 1.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 Pfam PF12705 PD-(D/E)XK nuclease superfamily 986 1139 3.0E-10 T 22-04-2016 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 SUPERFAMILY SSF52980 983 1128 2.84E-7 T 22-04-2016 IPR011335 Restriction endonuclease type II-like NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 PANTHER PTHR11070:SF23 322 536 7.1E-138 T 22-04-2016 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 PANTHER PTHR11070:SF23 117 202 7.1E-138 T 22-04-2016 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 PANTHER PTHR11070:SF23 559 824 7.1E-138 T 22-04-2016 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 PANTHER PTHR11070:SF23 15 87 7.1E-138 T 22-04-2016 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 PANTHER PTHR11070:SF23 859 934 7.1E-138 T 22-04-2016 NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 Gene3D G3DSA:3.40.50.300 777 918 5.9E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 Gene3D G3DSA:3.40.50.300 487 623 5.9E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00285 6bb4b6e509827ab13d8a9ff75fb52825 1163 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 14 1148 0.0 T 22-04-2016 IPR014151 DNA helicase, AddA type NHAM_RS07035 d7dd6cb5a49b39c66dd38a3281d56959 411 Pfam PF01548 Transposase 5 145 4.1E-15 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS07035 d7dd6cb5a49b39c66dd38a3281d56959 411 PANTHER PTHR33055:SF3 1 347 2.8E-56 T 22-04-2016 NHAM_RS07035 d7dd6cb5a49b39c66dd38a3281d56959 411 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 296 7.1E-23 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS07035 d7dd6cb5a49b39c66dd38a3281d56959 411 PANTHER PTHR33055 1 347 2.8E-56 T 22-04-2016 NHAM_RS15150 d7dd6cb5a49b39c66dd38a3281d56959 411 Pfam PF01548 Transposase 5 145 4.1E-15 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS15150 d7dd6cb5a49b39c66dd38a3281d56959 411 PANTHER PTHR33055:SF3 1 347 2.8E-56 T 22-04-2016 NHAM_RS15150 d7dd6cb5a49b39c66dd38a3281d56959 411 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 296 7.1E-23 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS15150 d7dd6cb5a49b39c66dd38a3281d56959 411 PANTHER PTHR33055 1 347 2.8E-56 T 22-04-2016 NHAM_RS04425 db86604a3263d271cbe7d5d07b622fd3 78 Pfam PF13683 Integrase core domain 1 62 1.2E-15 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS04425 db86604a3263d271cbe7d5d07b622fd3 78 SUPERFAMILY SSF53098 1 67 9.1E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS04425 db86604a3263d271cbe7d5d07b622fd3 78 Gene3D G3DSA:3.30.420.10 1 63 7.3E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS02145 d170552f4bd5e84be74b584f59c3b65e 243 Pfam PF01578 Cytochrome C assembly protein 23 181 3.9E-33 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 NHAM_RS02145 d170552f4bd5e84be74b584f59c3b65e 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 2.0E-57 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02145 d170552f4bd5e84be74b584f59c3b65e 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 153 179 2.0E-57 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02145 d170552f4bd5e84be74b584f59c3b65e 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 59 79 2.0E-57 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02145 d170552f4bd5e84be74b584f59c3b65e 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 42 59 2.0E-57 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02145 d170552f4bd5e84be74b584f59c3b65e 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 97 117 2.0E-57 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02145 d170552f4bd5e84be74b584f59c3b65e 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 118 138 2.0E-57 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02145 d170552f4bd5e84be74b584f59c3b65e 243 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 42 225 1.2E-84 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS02145 d170552f4bd5e84be74b584f59c3b65e 243 PANTHER PTHR30071 1 221 5.9E-71 T 22-04-2016 NHAM_RS03625 3aef0ce93c43e2fbb3238a25d859aef2 260 Pfam PF01553 Acyltransferase 61 186 4.7E-20 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NHAM_RS03625 3aef0ce93c43e2fbb3238a25d859aef2 260 SMART SM00563 69 189 4.2E-19 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NHAM_RS03625 3aef0ce93c43e2fbb3238a25d859aef2 260 SUPERFAMILY SSF69593 15 201 1.01E-22 T 22-04-2016 NHAM_RS03625 3aef0ce93c43e2fbb3238a25d859aef2 260 PANTHER PTHR10434 1 188 3.1E-23 T 22-04-2016 NHAM_RS03625 3aef0ce93c43e2fbb3238a25d859aef2 260 Gene3D G3DSA:3.40.1130.10 67 163 2.6E-9 T 22-04-2016 NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 SUPERFAMILY SSF63867 357 429 9.16E-14 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 Gene3D G3DSA:3.40.980.10 189 358 1.1E-56 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 Gene3D G3DSA:2.170.190.11 70 158 2.3E-24 T 22-04-2016 NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 PANTHER PTHR10192:SF12 18 444 7.2E-169 T 22-04-2016 NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 Pfam PF03453 MoeA N-terminal region (domain I and II) 28 194 1.7E-32 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 204 341 2.1E-27 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 PANTHER PTHR10192 18 444 7.2E-169 T 22-04-2016 NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 Gene3D G3DSA:3.90.105.10 159 188 5.5E-20 T 22-04-2016 NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 SUPERFAMILY SSF53850 538 651 5.5E-9 T 22-04-2016 NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 Pfam PF12727 PBP superfamily domain 458 636 1.2E-51 T 22-04-2016 IPR024370 PBP domain NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 Pfam PF03454 MoeA C-terminal region (domain IV) 360 428 4.4E-10 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 SUPERFAMILY SSF53218 204 351 2.09E-37 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 SUPERFAMILY SSF63882 26 202 8.37E-47 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 Gene3D G3DSA:2.40.340.10 359 429 6.0E-21 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 Pfam PF00994 Probable molybdopterin binding domain 207 345 2.0E-23 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 280 315 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 NHAM_RS16075 3086ab904b66e7c22a6426950ea33d79 653 SMART SM00852 207 346 7.6E-31 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS00450 ee401af3c7d98250be95ad81cdf37b70 835 PANTHER PTHR22683 302 832 2.5E-234 T 22-04-2016 NHAM_RS00450 ee401af3c7d98250be95ad81cdf37b70 835 Gene3D G3DSA:3.40.50.300 420 727 1.5E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00450 ee401af3c7d98250be95ad81cdf37b70 835 PANTHER PTHR22683:SF41 302 832 2.5E-234 T 22-04-2016 NHAM_RS00450 ee401af3c7d98250be95ad81cdf37b70 835 SMART SM00843 766 831 7.0E-35 T 22-04-2016 IPR018541 FtsK gamma domain NHAM_RS00450 ee401af3c7d98250be95ad81cdf37b70 835 Pfam PF01580 FtsK/SpoIIIE family 443 662 6.7E-63 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 NHAM_RS00450 ee401af3c7d98250be95ad81cdf37b70 835 Pfam PF09397 Ftsk gamma domain 771 828 5.3E-25 T 22-04-2016 IPR018541 FtsK gamma domain NHAM_RS00450 ee401af3c7d98250be95ad81cdf37b70 835 SUPERFAMILY SSF46785 767 831 6.53E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS00450 ee401af3c7d98250be95ad81cdf37b70 835 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 26 186 6.3E-25 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region NHAM_RS00450 ee401af3c7d98250be95ad81cdf37b70 835 SUPERFAMILY SSF52540 425 733 9.41E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00450 ee401af3c7d98250be95ad81cdf37b70 835 SMART SM00382 478 683 0.0014 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 SUPERFAMILY SSF51905 2 385 2.5E-68 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 477 1.2E-180 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 SUPERFAMILY SSF55424 354 476 1.58E-41 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PANTHER PTHR22912 3 120 9.1E-212 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PANTHER PTHR22912 146 470 9.1E-212 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PIRSF PIRSF000350 2 473 4.1E-81 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 Gene3D G3DSA:3.50.50.60 152 344 2.1E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 Gene3D G3DSA:3.50.50.60 5 151 8.4E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PANTHER PTHR22912:SF125 3 120 9.1E-212 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PANTHER PTHR22912:SF125 146 470 9.1E-212 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 6.7E-68 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 5.4E-66 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 5.4E-66 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 5.4E-66 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 187 212 5.4E-66 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 354 375 5.4E-66 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 290 5.4E-66 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 160 5.4E-66 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 441 461 5.4E-66 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 419 434 5.4E-66 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 358 466 6.2E-39 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 Gene3D G3DSA:3.30.390.30 345 474 8.1E-50 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 291 2.7E-37 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 187 205 2.7E-37 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 2.7E-37 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.7E-37 T 22-04-2016 NHAM_RS08955 8e9913f63243f1d8e398e9221937ff57 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.7E-37 T 22-04-2016 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 SUPERFAMILY SSF49503 135 268 1.79E-53 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 101 113 7.2E-47 T 22-04-2016 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 173 194 7.2E-47 T 22-04-2016 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 197 217 7.2E-47 T 22-04-2016 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 135 154 7.2E-47 T 22-04-2016 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 113 133 7.2E-47 T 22-04-2016 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 235 252 7.2E-47 T 22-04-2016 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 217 234 7.2E-47 T 22-04-2016 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 PANTHER PTHR22888 1 268 3.3E-99 T 22-04-2016 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 Gene3D G3DSA:1.10.287.90 42 127 1.3E-28 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 52 263 2.2E-63 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 41 127 2.6E-25 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 SUPERFAMILY SSF81464 39 130 1.55E-26 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 139 253 1.2E-46 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 198 246 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 NHAM_RS01285 bbc3a6c0dc27f64162844ac7a3abff12 285 Gene3D G3DSA:2.60.40.420 128 271 1.2E-56 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 SUPERFAMILY SSF49503 135 268 1.79E-53 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 101 113 7.2E-47 T 22-04-2016 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 173 194 7.2E-47 T 22-04-2016 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 197 217 7.2E-47 T 22-04-2016 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 135 154 7.2E-47 T 22-04-2016 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 113 133 7.2E-47 T 22-04-2016 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 235 252 7.2E-47 T 22-04-2016 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 PRINTS PR01166 Cytochrome c oxidase subunit II signature 217 234 7.2E-47 T 22-04-2016 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 PANTHER PTHR22888 1 268 3.3E-99 T 22-04-2016 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 Gene3D G3DSA:1.10.287.90 42 127 1.3E-28 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 52 263 2.2E-63 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 41 127 2.6E-25 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 SUPERFAMILY SSF81464 39 130 1.55E-26 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 139 253 1.2E-46 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 198 246 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 NHAM_RS17765 bbc3a6c0dc27f64162844ac7a3abff12 285 Gene3D G3DSA:2.60.40.420 128 271 1.2E-56 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS05015 14a746719cb83af001350d6b733e6bc3 266 SUPERFAMILY SSF53167 4 257 5.37E-64 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NHAM_RS05015 14a746719cb83af001350d6b733e6bc3 266 TIGRFAM TIGR01721 AMN-like: putative AMP nucleosidase 3 257 4.8E-101 T 22-04-2016 IPR010944 AMP nucleosidase, putative NHAM_RS05015 14a746719cb83af001350d6b733e6bc3 266 Gene3D G3DSA:3.40.50.1580 2 246 8.0E-66 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NHAM_RS05015 14a746719cb83af001350d6b733e6bc3 266 PANTHER PTHR21234:SF11 6 261 4.8E-67 T 22-04-2016 NHAM_RS05015 14a746719cb83af001350d6b733e6bc3 266 Pfam PF01048 Phosphorylase superfamily 62 223 9.1E-24 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NHAM_RS05015 14a746719cb83af001350d6b733e6bc3 266 PANTHER PTHR21234 6 261 4.8E-67 T 22-04-2016 IPR018017 Nucleoside phosphorylase NHAM_RS13920 54ca8c979cd614f8ed1dd154c33bd304 313 Gene3D G3DSA:3.40.50.300 14 297 1.4E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13920 54ca8c979cd614f8ed1dd154c33bd304 313 PANTHER PTHR34383 40 307 7.6E-125 T 22-04-2016 NHAM_RS13920 54ca8c979cd614f8ed1dd154c33bd304 313 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 17 284 4.7E-116 T 22-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 NHAM_RS13920 54ca8c979cd614f8ed1dd154c33bd304 313 SUPERFAMILY SSF52540 72 256 5.32E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13920 54ca8c979cd614f8ed1dd154c33bd304 313 PIRSF PIRSF028756 17 303 1.1E-80 T 22-04-2016 IPR016898 Polyphosphate kinase 2 NHAM_RS13920 54ca8c979cd614f8ed1dd154c33bd304 313 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 40 275 2.0E-65 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PANTHER PTHR30222:SF11 21 371 1.4E-138 T 22-04-2016 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 37 53 1.6E-65 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 183 202 1.6E-65 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 96 109 1.6E-65 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 80 94 1.6E-65 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 53 74 1.6E-65 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 160 174 1.6E-65 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 270 289 1.6E-65 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 129 145 1.6E-65 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 220 239 1.6E-65 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 315 341 1.6E-65 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 SUPERFAMILY SSF53850 31 370 1.47E-94 T 22-04-2016 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PIRSF PIRSF019574 1 371 7.1E-143 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 Gene3D G3DSA:3.40.190.10 31 152 2.4E-9 T 22-04-2016 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 Gene3D G3DSA:3.40.190.10 153 319 3.6E-66 T 22-04-2016 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 Pfam PF13416 Bacterial extracellular solute-binding protein 47 324 2.3E-28 T 22-04-2016 NHAM_RS07675 8d7dfc1f42ec1a9508b668fc59b7a9ea 371 PANTHER PTHR30222 21 371 1.4E-138 T 22-04-2016 NHAM_RS03855 0a0032a80c4d1e870db87cba82bf1f75 264 Gene3D G3DSA:3.40.190.10 131 194 2.0E-7 T 22-04-2016 NHAM_RS03855 0a0032a80c4d1e870db87cba82bf1f75 264 Pfam PF13531 Bacterial extracellular solute-binding protein 2 245 1.6E-9 T 22-04-2016 NHAM_RS03855 0a0032a80c4d1e870db87cba82bf1f75 264 SUPERFAMILY SSF53850 1 246 1.61E-13 T 22-04-2016 NHAM_RS03855 0a0032a80c4d1e870db87cba82bf1f75 264 Gene3D G3DSA:3.40.190.10 1 130 5.7E-15 T 22-04-2016 NHAM_RS09800 f62ab3e0b739000d9910fa7af8a99a1b 378 Gene3D G3DSA:3.30.750.24 10 94 6.1E-5 T 22-04-2016 IPR002645 STAS domain NHAM_RS09800 f62ab3e0b739000d9910fa7af8a99a1b 378 PANTHER PTHR30188:SF3 37 377 1.6E-161 T 22-04-2016 NHAM_RS09800 f62ab3e0b739000d9910fa7af8a99a1b 378 PANTHER PTHR30188 37 377 1.6E-161 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NHAM_RS09800 f62ab3e0b739000d9910fa7af8a99a1b 378 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 143 373 4.7E-69 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria NHAM_RS09800 f62ab3e0b739000d9910fa7af8a99a1b 378 SUPERFAMILY SSF52091 8 98 1.39E-8 T 22-04-2016 IPR002645 STAS domain NHAM_RS09800 f62ab3e0b739000d9910fa7af8a99a1b 378 Pfam PF02405 Permease MlaE 162 371 3.7E-70 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NHAM_RS14070 dd4d4c50f56e01320c57ec2d33fc990b 298 PANTHER PTHR18895 11 295 7.7E-55 T 22-04-2016 NHAM_RS14070 dd4d4c50f56e01320c57ec2d33fc990b 298 Gene3D G3DSA:3.40.50.150 123 291 2.6E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS14070 dd4d4c50f56e01320c57ec2d33fc990b 298 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 9 296 26.452 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 NHAM_RS14070 dd4d4c50f56e01320c57ec2d33fc990b 298 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 62 295 1.2E-53 T 22-04-2016 NHAM_RS14070 dd4d4c50f56e01320c57ec2d33fc990b 298 PANTHER PTHR18895:SF3 11 295 7.7E-55 T 22-04-2016 NHAM_RS14070 dd4d4c50f56e01320c57ec2d33fc990b 298 SUPERFAMILY SSF53335 59 292 3.41E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS18530 e37ba275224cab927e9ccacd272965f2 269 SUPERFAMILY SSF56784 31 261 9.72E-36 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS18530 e37ba275224cab927e9ccacd272965f2 269 Pfam PF02358 Trehalose-phosphatase 33 236 2.5E-31 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 NHAM_RS18530 e37ba275224cab927e9ccacd272965f2 269 Gene3D G3DSA:3.40.50.1000 31 105 4.0E-34 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS18530 e37ba275224cab927e9ccacd272965f2 269 Gene3D G3DSA:3.40.50.1000 182 264 4.0E-34 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS18530 e37ba275224cab927e9ccacd272965f2 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 32 226 4.0E-16 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 NHAM_RS18530 e37ba275224cab927e9ccacd272965f2 269 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 28 260 1.5E-35 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 NHAM_RS18530 e37ba275224cab927e9ccacd272965f2 269 PANTHER PTHR10788 30 265 1.8E-44 T 22-04-2016 NHAM_RS18335 eb92fc25c194f6fe1f194dbfcff2e0a0 423 SMART SM00729 144 362 4.9E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NHAM_RS18335 eb92fc25c194f6fe1f194dbfcff2e0a0 423 SUPERFAMILY SSF102114 144 365 1.31E-51 T 22-04-2016 NHAM_RS18335 eb92fc25c194f6fe1f194dbfcff2e0a0 423 Pfam PF04055 Radical SAM superfamily 149 321 1.6E-21 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NHAM_RS18335 eb92fc25c194f6fe1f194dbfcff2e0a0 423 Pfam PF00919 Uncharacterized protein family UPF0004 3 89 3.3E-16 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 NHAM_RS18335 eb92fc25c194f6fe1f194dbfcff2e0a0 423 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 407 4.6E-127 T 22-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 NHAM_RS18335 eb92fc25c194f6fe1f194dbfcff2e0a0 423 PANTHER PTHR11918 1 400 1.1E-115 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein NHAM_RS18335 eb92fc25c194f6fe1f194dbfcff2e0a0 423 Gene3D G3DSA:3.80.30.20 144 366 1.1E-61 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NHAM_RS18335 eb92fc25c194f6fe1f194dbfcff2e0a0 423 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 2 402 8.1E-95 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 NHAM_RS18335 eb92fc25c194f6fe1f194dbfcff2e0a0 423 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 148 168 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 NHAM_RS18335 eb92fc25c194f6fe1f194dbfcff2e0a0 423 PANTHER PTHR11918:SF45 1 400 1.1E-115 T 22-04-2016 NHAM_RS07930 f6d820257b7da45d6de44c311e829d09 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 NHAM_RS07930 f6d820257b7da45d6de44c311e829d09 92 SUPERFAMILY SSF54570 3 84 3.4E-33 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 NHAM_RS07930 f6d820257b7da45d6de44c311e829d09 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 6.5E-40 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 NHAM_RS07930 f6d820257b7da45d6de44c311e829d09 92 PANTHER PTHR11880 1 91 3.1E-47 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07930 f6d820257b7da45d6de44c311e829d09 92 PIRSF PIRSF002144 1 92 3.0E-32 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07930 f6d820257b7da45d6de44c311e829d09 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.4E-20 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07930 f6d820257b7da45d6de44c311e829d09 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.4E-20 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07930 f6d820257b7da45d6de44c311e829d09 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.4E-20 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07930 f6d820257b7da45d6de44c311e829d09 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 23.984 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07930 f6d820257b7da45d6de44c311e829d09 92 Pfam PF00203 Ribosomal protein S19 3 83 1.5E-35 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07930 f6d820257b7da45d6de44c311e829d09 92 Gene3D G3DSA:3.30.860.10 1 90 7.1E-40 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 NHAM_RS14365 02e8ce1ef1c360223263203f7d70c63c 399 PANTHER PTHR21152 1 386 9.2E-144 T 22-04-2016 NHAM_RS14365 02e8ce1ef1c360223263203f7d70c63c 399 PIRSF PIRSF000524 1 389 3.0E-128 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 NHAM_RS14365 02e8ce1ef1c360223263203f7d70c63c 399 SUPERFAMILY SSF53383 6 369 2.64E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS14365 02e8ce1ef1c360223263203f7d70c63c 399 Gene3D G3DSA:3.40.640.10 19 262 5.1E-49 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS14365 02e8ce1ef1c360223263203f7d70c63c 399 PANTHER PTHR21152:SF21 1 386 9.2E-144 T 22-04-2016 NHAM_RS14365 02e8ce1ef1c360223263203f7d70c63c 399 Pfam PF00266 Aminotransferase class-V 9 321 5.3E-31 T 22-04-2016 IPR000192 Aminotransferase class V domain NHAM_RS14365 02e8ce1ef1c360223263203f7d70c63c 399 Gene3D G3DSA:3.90.1150.10 263 370 1.1E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS11485 4d0484e53d5850e6372d172dab48ca30 256 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 8 244 7.7E-92 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 NHAM_RS11485 4d0484e53d5850e6372d172dab48ca30 256 PANTHER PTHR30456 6 251 1.6E-126 T 22-04-2016 NHAM_RS11485 4d0484e53d5850e6372d172dab48ca30 256 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 249 115.901 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 NHAM_RS11485 4d0484e53d5850e6372d172dab48ca30 256 PANTHER PTHR30456:SF0 6 251 1.6E-126 T 22-04-2016 NHAM_RS11485 4d0484e53d5850e6372d172dab48ca30 256 SUPERFAMILY SSF63892 7 247 4.84E-90 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 NHAM_RS11485 4d0484e53d5850e6372d172dab48ca30 256 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 8 244 8.7E-81 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 NHAM_RS11485 4d0484e53d5850e6372d172dab48ca30 256 Gene3D G3DSA:3.20.20.70 6 247 1.3E-96 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS10420 6ea1fbd84edc0b47d029526230e61851 244 PIRSF PIRSF000851 7 244 1.6E-93 T 22-04-2016 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 NHAM_RS10420 6ea1fbd84edc0b47d029526230e61851 244 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 89 1.2E-5 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NHAM_RS13745 0d4eed85095aead80c8ded16008228b6 654 Gene3D G3DSA:1.50.10.20 309 642 2.0E-110 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NHAM_RS13745 0d4eed85095aead80c8ded16008228b6 654 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 18 644 3.1E-228 T 22-04-2016 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00030+4.2.1.12|KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072|UniPathway: UPA00337 NHAM_RS13745 0d4eed85095aead80c8ded16008228b6 654 SUPERFAMILY SSF48239 315 642 1.88E-102 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NHAM_RS13745 0d4eed85095aead80c8ded16008228b6 654 SUPERFAMILY SSF48239 68 85 1.88E-102 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NHAM_RS13745 0d4eed85095aead80c8ded16008228b6 654 PANTHER PTHR11764 19 649 3.4E-299 T 22-04-2016 NHAM_RS13745 0d4eed85095aead80c8ded16008228b6 654 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 22 308 9.7E-114 T 22-04-2016 IPR032697 Squalene cyclase, N-terminal NHAM_RS13745 0d4eed85095aead80c8ded16008228b6 654 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 319 641 8.1E-155 T 22-04-2016 IPR032696 Squalene cyclase, C-terminal NHAM_RS13745 0d4eed85095aead80c8ded16008228b6 654 SUPERFAMILY SSF48239 45 315 3.37E-75 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NHAM_RS13745 0d4eed85095aead80c8ded16008228b6 654 PANTHER PTHR11764:SF12 19 649 3.4E-299 T 22-04-2016 NHAM_RS13745 0d4eed85095aead80c8ded16008228b6 654 Gene3D G3DSA:1.50.10.20 42 308 5.6E-63 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NHAM_RS13745 0d4eed85095aead80c8ded16008228b6 654 ProSitePatterns PS01074 Terpene synthases signature. 496 510 - T 22-04-2016 IPR002365 Terpene synthase, conserved site GO:0016866 NHAM_RS13745 0d4eed85095aead80c8ded16008228b6 654 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 21 641 3.1E-178 T 22-04-2016 IPR018333 Squalene cyclase GO:0016866 NHAM_RS19220 2aa080661d5dedca6674c833b84acee3 641 SUPERFAMILY SSF56801 9 637 4.71E-153 T 22-04-2016 NHAM_RS19220 2aa080661d5dedca6674c833b84acee3 641 Gene3D G3DSA:2.30.38.10 432 509 1.9E-11 T 22-04-2016 NHAM_RS19220 2aa080661d5dedca6674c833b84acee3 641 Pfam PF00501 AMP-binding enzyme 67 515 1.5E-78 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NHAM_RS19220 2aa080661d5dedca6674c833b84acee3 641 Gene3D G3DSA:3.40.50.980 59 256 4.4E-37 T 22-04-2016 NHAM_RS19220 2aa080661d5dedca6674c833b84acee3 641 ProSitePatterns PS00455 Putative AMP-binding domain signature. 251 262 - T 22-04-2016 IPR020845 AMP-binding, conserved site NHAM_RS19220 2aa080661d5dedca6674c833b84acee3 641 PANTHER PTHR24095:SF199 2 641 0.0 T 22-04-2016 NHAM_RS19220 2aa080661d5dedca6674c833b84acee3 641 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 9 63 1.4E-17 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 NHAM_RS19220 2aa080661d5dedca6674c833b84acee3 641 PANTHER PTHR24095 2 641 0.0 T 22-04-2016 NHAM_RS19220 2aa080661d5dedca6674c833b84acee3 641 Pfam PF13193 AMP-binding enzyme C-terminal domain 525 603 1.9E-22 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NHAM_RS19220 2aa080661d5dedca6674c833b84acee3 641 Gene3D G3DSA:3.40.50.980 257 417 1.4E-26 T 22-04-2016 NHAM_RS19220 2aa080661d5dedca6674c833b84acee3 641 Gene3D G3DSA:3.30.300.30 512 615 2.9E-21 T 22-04-2016 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 Gene3D G3DSA:3.40.50.300 291 508 4.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 SUPERFAMILY SSF47781 85 166 3.71E-11 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 SUPERFAMILY SSF52540 441 506 2.73E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 Pfam PF13604 AAA domain 330 508 7.4E-43 T 22-04-2016 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 PANTHER PTHR10887:SF284 327 585 1.3E-102 T 22-04-2016 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 PANTHER PTHR10887:SF284 132 181 1.3E-102 T 22-04-2016 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 PANTHER PTHR10887:SF284 650 703 1.3E-102 T 22-04-2016 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 Pfam PF14520 Helix-hairpin-helix domain 99 147 1.8E-7 T 22-04-2016 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 Pfam PF14490 Helix-hairpin-helix containing domain 150 238 4.2E-31 T 22-04-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 14 720 1.4E-213 T 22-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 SMART SM00382 343 525 9.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 SUPERFAMILY SSF52540 189 488 2.08E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 Gene3D G3DSA:1.10.150.20 99 166 1.2E-7 T 22-04-2016 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 PANTHER PTHR10887 327 585 1.3E-102 T 22-04-2016 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 PANTHER PTHR10887 132 181 1.3E-102 T 22-04-2016 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 PANTHER PTHR10887 650 703 1.3E-102 T 22-04-2016 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 101 112 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 10 726 27.81 T 22-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 Pfam PF13538 UvrD-like helicase C-terminal domain 650 697 1.7E-17 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 SMART SM00278 191 210 56.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 SMART SM00278 127 146 9.7 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 Gene3D G3DSA:3.40.50.300 653 701 5.0E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14555 8cddd9dfd79f2cfdcaf272a6d7083586 733 SUPERFAMILY SSF52540 550 715 2.73E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10770 c1c212ab4257a0663d4af677c1fa767d 356 Gene3D G3DSA:3.30.1330.10 23 171 1.2E-60 T 22-04-2016 IPR016188 PurM-like, N-terminal domain NHAM_RS10770 c1c212ab4257a0663d4af677c1fa767d 356 Pfam PF00586 AIR synthase related protein, N-terminal domain 62 165 8.0E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain NHAM_RS10770 c1c212ab4257a0663d4af677c1fa767d 356 SUPERFAMILY SSF56042 174 347 3.59E-56 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NHAM_RS10770 c1c212ab4257a0663d4af677c1fa767d 356 Pfam PF02769 AIR synthase related protein, C-terminal domain 179 348 6.2E-35 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NHAM_RS10770 c1c212ab4257a0663d4af677c1fa767d 356 PANTHER PTHR10520 5 356 9.2E-203 T 22-04-2016 NHAM_RS10770 c1c212ab4257a0663d4af677c1fa767d 356 SUPERFAMILY SSF55326 8 171 1.57E-47 T 22-04-2016 NHAM_RS10770 c1c212ab4257a0663d4af677c1fa767d 356 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 349 44.192 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS10770 c1c212ab4257a0663d4af677c1fa767d 356 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 340 7.3E-130 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS10770 c1c212ab4257a0663d4af677c1fa767d 356 Gene3D G3DSA:3.90.650.10 175 347 4.3E-63 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NHAM_RS11955 b5ed28af4f371ed8b0c1e9b39ee1e884 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 142 1.6E-30 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NHAM_RS11955 b5ed28af4f371ed8b0c1e9b39ee1e884 352 SUPERFAMILY SSF50129 4 181 1.56E-41 T 22-04-2016 IPR011032 GroES-like NHAM_RS11955 b5ed28af4f371ed8b0c1e9b39ee1e884 352 Gene3D G3DSA:3.40.50.720 194 299 1.6E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11955 b5ed28af4f371ed8b0c1e9b39ee1e884 352 PANTHER PTHR11695 16 351 7.5E-154 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NHAM_RS11955 b5ed28af4f371ed8b0c1e9b39ee1e884 352 SUPERFAMILY SSF51735 150 320 1.73E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11955 b5ed28af4f371ed8b0c1e9b39ee1e884 352 SMART SM00829 7 350 9.5E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NHAM_RS11955 b5ed28af4f371ed8b0c1e9b39ee1e884 352 Gene3D G3DSA:3.90.180.10 4 193 2.7E-47 T 22-04-2016 IPR011032 GroES-like NHAM_RS11955 b5ed28af4f371ed8b0c1e9b39ee1e884 352 PANTHER PTHR11695:SF587 16 351 7.5E-154 T 22-04-2016 NHAM_RS11955 b5ed28af4f371ed8b0c1e9b39ee1e884 352 Pfam PF00107 Zinc-binding dehydrogenase 188 313 7.0E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NHAM_RS11955 b5ed28af4f371ed8b0c1e9b39ee1e884 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 73 87 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 NHAM_RS13385 91e4e67138dacf7a9bbb1b275fc065d0 244 PANTHER PTHR31272 1 235 5.2E-78 T 22-04-2016 NHAM_RS13385 91e4e67138dacf7a9bbb1b275fc065d0 244 PANTHER PTHR31272:SF4 1 235 5.2E-78 T 22-04-2016 NHAM_RS13385 91e4e67138dacf7a9bbb1b275fc065d0 244 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 11 222 6.9E-62 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 NHAM_RS16585 57187099a5774373a12e1590cdb72d39 179 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 7 175 4.2E-66 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 NHAM_RS16585 57187099a5774373a12e1590cdb72d39 179 Gene3D G3DSA:3.40.50.2020 5 175 2.4E-68 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS16585 57187099a5774373a12e1590cdb72d39 179 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 7 176 36.652 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 NHAM_RS16585 57187099a5774373a12e1590cdb72d39 179 PANTHER PTHR32315 5 179 1.0E-79 T 22-04-2016 NHAM_RS16585 57187099a5774373a12e1590cdb72d39 179 Pfam PF00156 Phosphoribosyl transferase domain 35 156 7.2E-18 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NHAM_RS16585 57187099a5774373a12e1590cdb72d39 179 SUPERFAMILY SSF53271 9 175 2.88E-52 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS07945 7407b875dc7d7f60dd1e9d7cf6c38814 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07945 7407b875dc7d7f60dd1e9d7cf6c38814 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07945 7407b875dc7d7f60dd1e9d7cf6c38814 137 Gene3D G3DSA:3.90.1170.10 24 134 2.2E-51 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07945 7407b875dc7d7f60dd1e9d7cf6c38814 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 5.4E-38 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NHAM_RS07945 7407b875dc7d7f60dd1e9d7cf6c38814 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 5.4E-38 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NHAM_RS07945 7407b875dc7d7f60dd1e9d7cf6c38814 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 5.4E-38 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NHAM_RS07945 7407b875dc7d7f60dd1e9d7cf6c38814 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 5.4E-38 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NHAM_RS07945 7407b875dc7d7f60dd1e9d7cf6c38814 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 4.8E-57 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NHAM_RS07945 7407b875dc7d7f60dd1e9d7cf6c38814 137 PANTHER PTHR12220 1 134 2.3E-67 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NHAM_RS07945 7407b875dc7d7f60dd1e9d7cf6c38814 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.491 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 NHAM_RS07945 7407b875dc7d7f60dd1e9d7cf6c38814 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.0E-48 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07945 7407b875dc7d7f60dd1e9d7cf6c38814 137 SUPERFAMILY SSF54686 1 134 2.22E-54 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 NHAM_RS09435 770348caed212dfe7724456b63c8fb6a 273 TIGRFAM TIGR00444 mazG: MazG family protein 13 268 3.7E-90 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG NHAM_RS09435 770348caed212dfe7724456b63c8fb6a 273 PANTHER PTHR30522:SF0 5 273 2.3E-120 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG NHAM_RS09435 770348caed212dfe7724456b63c8fb6a 273 PANTHER PTHR30522 5 273 2.3E-120 T 22-04-2016 NHAM_RS09435 770348caed212dfe7724456b63c8fb6a 273 SUPERFAMILY SSF101386 5 107 5.79E-25 T 22-04-2016 NHAM_RS09435 770348caed212dfe7724456b63c8fb6a 273 SUPERFAMILY SSF101386 153 247 7.48E-24 T 22-04-2016 NHAM_RS09435 770348caed212dfe7724456b63c8fb6a 273 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 175 237 1.1E-6 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core NHAM_RS09435 770348caed212dfe7724456b63c8fb6a 273 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 3.4E-28 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core NHAM_RS09435 770348caed212dfe7724456b63c8fb6a 273 Gene3D G3DSA:1.10.287.1080 23 76 4.3E-7 T 22-04-2016 NHAM_RS09435 770348caed212dfe7724456b63c8fb6a 273 Gene3D G3DSA:1.10.287.1080 147 230 7.6E-11 T 22-04-2016 NHAM_RS04490 e519297e532264cc83d5dbed2abdda29 216 SMART SM00882 5 200 4.6E-56 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NHAM_RS04490 e519297e532264cc83d5dbed2abdda29 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 206 1.6E-92 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 NHAM_RS04490 e519297e532264cc83d5dbed2abdda29 216 SUPERFAMILY SSF100950 2 215 5.02E-66 T 22-04-2016 NHAM_RS04490 e519297e532264cc83d5dbed2abdda29 216 Pfam PF01144 Coenzyme A transferase 7 199 7.6E-37 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NHAM_RS04490 e519297e532264cc83d5dbed2abdda29 216 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 22-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 NHAM_RS04490 e519297e532264cc83d5dbed2abdda29 216 PANTHER PTHR13707 1 214 1.3E-99 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NHAM_RS04490 e519297e532264cc83d5dbed2abdda29 216 Gene3D G3DSA:3.40.810.20 4 211 4.1E-80 T 22-04-2016 NHAM_RS06275 deff9295fa00d8ff9b81a53faa968505 466 SUPERFAMILY SSF52467 296 465 1.31E-75 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NHAM_RS06275 deff9295fa00d8ff9b81a53faa968505 466 PIRSF PIRSF000204 1 466 5.0E-213 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 NHAM_RS06275 deff9295fa00d8ff9b81a53faa968505 466 Pfam PF02233 NAD(P) transhydrogenase beta subunit 8 464 5.5E-191 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 NHAM_RS06275 deff9295fa00d8ff9b81a53faa968505 466 Gene3D G3DSA:3.40.50.1220 295 465 3.0E-86 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NHAM_RS06275 deff9295fa00d8ff9b81a53faa968505 466 PANTHER PTHR10160 1 464 2.6E-263 T 22-04-2016 NHAM_RS06275 deff9295fa00d8ff9b81a53faa968505 466 PANTHER PTHR10160:SF24 1 464 2.6E-263 T 22-04-2016 NHAM_RS15575 914cd9683d5c5268cbad9425e4a1a66a 367 SUPERFAMILY SSF53383 9 363 6.45E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS15575 914cd9683d5c5268cbad9425e4a1a66a 367 PIRSF PIRSF000390 4 366 7.3E-115 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NHAM_RS15575 914cd9683d5c5268cbad9425e4a1a66a 367 Gene3D G3DSA:3.90.1150.10 246 364 1.4E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS15575 914cd9683d5c5268cbad9425e4a1a66a 367 PANTHER PTHR30244:SF13 1 367 9.3E-126 T 22-04-2016 NHAM_RS15575 914cd9683d5c5268cbad9425e4a1a66a 367 Gene3D G3DSA:3.40.640.10 11 243 2.6E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS15575 914cd9683d5c5268cbad9425e4a1a66a 367 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 360 3.1E-125 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NHAM_RS15575 914cd9683d5c5268cbad9425e4a1a66a 367 PANTHER PTHR30244 1 367 9.3E-126 T 22-04-2016 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 408 427 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 PANTHER PTHR32248 2 64 6.6E-155 T 22-04-2016 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 PANTHER PTHR32248 95 522 6.6E-155 T 22-04-2016 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 50 2.1E-18 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 PIRSF PIRSF000774 1 522 7.7E-146 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 Pfam PF04963 Sigma-54 factor, core binding domain 159 346 4.5E-51 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 500 507 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 519 3.6E-130 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 PANTHER PTHR32248:SF4 2 64 6.6E-155 T 22-04-2016 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 PANTHER PTHR32248:SF4 95 522 6.6E-155 T 22-04-2016 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 Pfam PF04552 Sigma-54, DNA binding domain 361 520 3.4E-72 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 PRINTS PR00045 Sigma-54 factor signature 436 447 2.7E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 PRINTS PR00045 Sigma-54 factor signature 232 249 2.7E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 PRINTS PR00045 Sigma-54 factor signature 495 513 2.7E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NHAM_RS00870 3acbb47c6ddacc999dea3a096d5a53a6 546 PRINTS PR00045 Sigma-54 factor signature 420 432 2.7E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 SUPERFAMILY SSF82693 143 181 2.41E-10 T 22-04-2016 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 SUPERFAMILY SSF82693 268 325 2.41E-10 T 22-04-2016 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.7E-9 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.7E-9 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.7E-9 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.7E-9 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 Gene3D G3DSA:3.30.2090.10 721 812 4.4E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 Gene3D G3DSA:3.30.2090.10 182 264 1.7E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 Gene3D G3DSA:3.30.70.1430 44 131 4.9E-20 T 22-04-2016 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 SUPERFAMILY SSF82714 183 265 4.19E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 1.9E-236 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 SUPERFAMILY SSF82866 810 1036 5.36E-49 T 22-04-2016 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 Gene3D G3DSA:1.10.3850.10 278 505 3.5E-48 T 22-04-2016 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 Gene3D G3DSA:1.10.3850.10 818 1035 3.6E-53 T 22-04-2016 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 2.6E-266 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 SUPERFAMILY SSF82693 565 653 1.43E-6 T 22-04-2016 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 SUPERFAMILY SSF82693 44 126 9.94E-19 T 22-04-2016 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 SUPERFAMILY SSF82866 294 504 1.18E-35 T 22-04-2016 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 PANTHER PTHR32063:SF12 2 1035 0.0 T 22-04-2016 NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 SUPERFAMILY SSF82714 722 812 1.22E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS16895 cdda21ce5c852a852f137d9d9acb10a4 1050 PANTHER PTHR32063 2 1035 0.0 T 22-04-2016 NHAM_RS16670 b6b1a8ecd829214f50254b1adfc1a5e3 687 Gene3D G3DSA:3.40.50.880 255 510 2.2E-30 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS16670 b6b1a8ecd829214f50254b1adfc1a5e3 687 SUPERFAMILY SSF52317 259 509 8.24E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS16670 b6b1a8ecd829214f50254b1adfc1a5e3 687 PANTHER PTHR37947 1 671 6.8E-104 T 22-04-2016 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 Gene3D G3DSA:1.20.1260.10 1 155 2.1E-59 T 22-04-2016 IPR012347 Ferritin-related NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 SUPERFAMILY SSF47240 1 155 3.88E-52 T 22-04-2016 IPR009078 Ferritin-like superfamily NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 Pfam PF00210 Ferritin-like domain 8 143 1.2E-35 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 PANTHER PTHR30295 1 152 2.9E-43 T 22-04-2016 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 PANTHER PTHR30295:SF0 1 152 2.9E-43 T 22-04-2016 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 PRINTS PR00601 Bacterioferritin signature 23 43 1.5E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 PRINTS PR00601 Bacterioferritin signature 44 64 1.5E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 PRINTS PR00601 Bacterioferritin signature 107 127 1.5E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 PRINTS PR00601 Bacterioferritin signature 65 85 1.5E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 PRINTS PR00601 Bacterioferritin signature 128 149 1.5E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 PRINTS PR00601 Bacterioferritin signature 86 106 1.5E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 PRINTS PR00601 Bacterioferritin signature 3 22 1.5E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 9.9E-59 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NHAM_RS14895 8f2a6b56bbe90fbb824cb8d671547258 160 PIRSF PIRSF002560 1 157 5.3E-66 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 761 4.8E-302 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 Gene3D G3DSA:1.10.287.380 879 950 1.4E-5 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 Gene3D G3DSA:3.40.50.620 4 196 1.9E-145 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 Gene3D G3DSA:3.40.50.620 366 609 1.9E-145 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 Gene3D G3DSA:3.90.740.10 197 362 9.8E-44 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 Pfam PF08264 Anticodon-binding domain of tRNA 653 824 1.2E-35 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 951 2.4E-15 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 PANTHER PTHR11946:SF5 2 750 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 PANTHER PTHR11946:SF5 777 864 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 PANTHER PTHR11946:SF5 882 944 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 SUPERFAMILY SSF46589 886 950 7.85E-13 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 Gene3D G3DSA:1.10.730.10 611 820 2.7E-69 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 PRINTS PR00986 Valyl-tRNA synthetase signature 492 513 8.7E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 PRINTS PR00986 Valyl-tRNA synthetase signature 371 384 8.7E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 PRINTS PR00986 Valyl-tRNA synthetase signature 523 541 8.7E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 8.7E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 PRINTS PR00986 Valyl-tRNA synthetase signature 240 257 8.7E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 SUPERFAMILY SSF52374 366 621 1.34E-140 T 22-04-2016 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 SUPERFAMILY SSF52374 3 195 1.34E-140 T 22-04-2016 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 SUPERFAMILY SSF47323 788 900 6.73E-51 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 SUPERFAMILY SSF47323 624 758 6.73E-51 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 SUPERFAMILY SSF50677 195 367 9.03E-55 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 Hamap MF_02004 Valine--tRNA ligase [valS]. 2 951 15.817 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 611 1.7E-206 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 PANTHER PTHR11946 2 750 0.0 T 22-04-2016 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 PANTHER PTHR11946 777 864 0.0 T 22-04-2016 NHAM_RS09355 1255b2d66bc11dbf0e5a4aed1311c653 954 PANTHER PTHR11946 882 944 0.0 T 22-04-2016 NHAM_RS01460 d862f68edc141c3e1917b81d242a1d6d 155 PANTHER PTHR11717 9 149 1.4E-37 T 22-04-2016 NHAM_RS01460 d862f68edc141c3e1917b81d242a1d6d 155 Gene3D G3DSA:3.40.50.270 10 147 3.6E-29 T 22-04-2016 NHAM_RS01460 d862f68edc141c3e1917b81d242a1d6d 155 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 13 144 4.4E-14 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily NHAM_RS01460 d862f68edc141c3e1917b81d242a1d6d 155 SMART SM00226 11 149 3.5E-18 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily NHAM_RS01460 d862f68edc141c3e1917b81d242a1d6d 155 SUPERFAMILY SSF52788 11 147 9.29E-33 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily NHAM_RS01460 d862f68edc141c3e1917b81d242a1d6d 155 PANTHER PTHR11717:SF18 9 149 1.4E-37 T 22-04-2016 NHAM_RS07510 bd051f466e27dcc4d4d467f5e32ad612 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 285 2.4E-32 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 NHAM_RS07510 bd051f466e27dcc4d4d467f5e32ad612 289 PANTHER PTHR22981 1 289 2.0E-159 T 22-04-2016 NHAM_RS07510 bd051f466e27dcc4d4d467f5e32ad612 289 PIRSF PIRSF000103 1 289 1.7E-64 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 NHAM_RS07510 bd051f466e27dcc4d4d467f5e32ad612 289 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 NHAM_RS07510 bd051f466e27dcc4d4d467f5e32ad612 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 1.6E-42 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NHAM_RS07510 bd051f466e27dcc4d4d467f5e32ad612 289 SUPERFAMILY SSF48179 165 288 6.69E-38 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS07510 bd051f466e27dcc4d4d467f5e32ad612 289 SUPERFAMILY SSF51735 2 165 1.31E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS07510 bd051f466e27dcc4d4d467f5e32ad612 289 Gene3D G3DSA:3.40.50.720 1 164 8.0E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS07510 bd051f466e27dcc4d4d467f5e32ad612 289 Gene3D G3DSA:1.10.1040.10 166 289 2.1E-37 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NHAM_RS07510 bd051f466e27dcc4d4d467f5e32ad612 289 PANTHER PTHR22981:SF49 1 289 2.0E-159 T 22-04-2016 NHAM_RS15415 865448bb7c153413a5ac0c6844c39fab 77 PANTHER PTHR36455 2 77 2.7E-40 T 22-04-2016 NHAM_RS15415 865448bb7c153413a5ac0c6844c39fab 77 Pfam PF05717 IS66 Orf2 like protein 9 77 2.6E-26 T 22-04-2016 IPR008878 Transposase IS66, Orf2 NHAM_RS15415 865448bb7c153413a5ac0c6844c39fab 77 PANTHER PTHR36455:SF2 2 77 2.7E-40 T 22-04-2016 NHAM_RS05700 9b92052054c5586c80808db477436fc2 274 SUPERFAMILY SSF56925 94 274 2.15E-19 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS05700 9b92052054c5586c80808db477436fc2 274 SUPERFAMILY SSF56925 45 58 2.15E-19 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS05700 9b92052054c5586c80808db477436fc2 274 Pfam PF13505 Outer membrane protein beta-barrel domain 43 274 6.0E-10 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel NHAM_RS05700 9b92052054c5586c80808db477436fc2 274 Gene3D G3DSA:2.40.160.20 43 274 7.3E-22 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS03690 dd5b562e379e944c9e35e30caece78bc 382 Gene3D G3DSA:2.40.50.100 61 94 1.4E-20 T 22-04-2016 NHAM_RS03690 dd5b562e379e944c9e35e30caece78bc 382 Gene3D G3DSA:2.40.50.100 169 200 1.4E-20 T 22-04-2016 NHAM_RS03690 dd5b562e379e944c9e35e30caece78bc 382 SUPERFAMILY SSF111369 49 297 4.18E-64 T 22-04-2016 NHAM_RS03690 dd5b562e379e944c9e35e30caece78bc 382 PANTHER PTHR30158 8 380 9.8E-150 T 22-04-2016 NHAM_RS03690 dd5b562e379e944c9e35e30caece78bc 382 Pfam PF13437 HlyD family secretion protein 172 289 2.0E-5 T 22-04-2016 NHAM_RS03690 dd5b562e379e944c9e35e30caece78bc 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 372 3.1E-76 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS03690 dd5b562e379e944c9e35e30caece78bc 382 Pfam PF13533 Biotin-lipoyl like 61 108 3.7E-14 T 22-04-2016 NHAM_RS03690 dd5b562e379e944c9e35e30caece78bc 382 PANTHER PTHR30158:SF2 8 380 9.8E-150 T 22-04-2016 NHAM_RS04805 90eea0ef0eabfa260ee93a7c41bd1f87 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.1E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS04805 90eea0ef0eabfa260ee93a7c41bd1f87 199 PANTHER PTHR30055 1 195 5.7E-17 T 22-04-2016 NHAM_RS04805 90eea0ef0eabfa260ee93a7c41bd1f87 199 Gene3D G3DSA:1.10.10.60 2 57 6.4E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS04805 90eea0ef0eabfa260ee93a7c41bd1f87 199 SUPERFAMILY SSF46689 1 72 5.13E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS04805 90eea0ef0eabfa260ee93a7c41bd1f87 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.2E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS04805 90eea0ef0eabfa260ee93a7c41bd1f87 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.2E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS04805 90eea0ef0eabfa260ee93a7c41bd1f87 199 SUPERFAMILY SSF48498 84 196 1.56E-7 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NHAM_RS04805 90eea0ef0eabfa260ee93a7c41bd1f87 199 Gene3D G3DSA:1.10.357.10 58 196 5.8E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NHAM_RS18850 b9dfe7f560d2c90910a59f344c8d63a6 165 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 13 165 5.2E-48 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY NHAM_RS18850 b9dfe7f560d2c90910a59f344c8d63a6 165 PIRSF PIRSF010312 9 165 7.9E-52 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY NHAM_RS18850 b9dfe7f560d2c90910a59f344c8d63a6 165 Pfam PF13501 Sulfur oxidation protein SoxY 61 163 3.0E-33 T 22-04-2016 IPR032711 Ig-like SoxY domain NHAM_RS11720 073c5bec2954ab550961977900139d01 366 PIRSF PIRSF004911 5 356 1.3E-129 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase NHAM_RS11720 073c5bec2954ab550961977900139d01 366 PANTHER PTHR30538 12 332 2.0E-123 T 22-04-2016 NHAM_RS11720 073c5bec2954ab550961977900139d01 366 SUPERFAMILY SSF102114 93 331 2.22E-33 T 22-04-2016 NHAM_RS11720 073c5bec2954ab550961977900139d01 366 Pfam PF04055 Radical SAM superfamily 107 256 3.5E-10 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NHAM_RS11720 073c5bec2954ab550961977900139d01 366 Gene3D G3DSA:3.20.20.70 95 306 2.3E-22 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS11720 073c5bec2954ab550961977900139d01 366 TIGRFAM TIGR03822 AblA_like_2: lysine-2,3-aminomutase-related protein 13 332 3.3E-172 T 22-04-2016 IPR022447 Lysine-2,3-aminomutase-related NHAM_RS11720 073c5bec2954ab550961977900139d01 366 Pfam PF13353 4Fe-4S single cluster domain 106 174 5.4E-6 T 22-04-2016 NHAM_RS11720 073c5bec2954ab550961977900139d01 366 PANTHER PTHR30538:SF1 12 332 2.0E-123 T 22-04-2016 NHAM_RS11720 073c5bec2954ab550961977900139d01 366 TIGRFAM TIGR00238 TIGR00238: KamA family protein 39 320 6.3E-79 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase NHAM_RS07530 883de65174bfa691ac05cea10ffd13ae 362 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 25 2.7E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NHAM_RS07530 883de65174bfa691ac05cea10ffd13ae 362 PANTHER PTHR33376:SF5 1 342 2.9E-178 T 22-04-2016 NHAM_RS07530 883de65174bfa691ac05cea10ffd13ae 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 320 5.9E-66 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 NHAM_RS07530 883de65174bfa691ac05cea10ffd13ae 362 PANTHER PTHR33376 1 342 2.9E-178 T 22-04-2016 NHAM_RS07530 883de65174bfa691ac05cea10ffd13ae 362 PIRSF PIRSF039026 1 355 3.8E-128 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like NHAM_RS07530 883de65174bfa691ac05cea10ffd13ae 362 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 24 1.3E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NHAM_RS01650 ace4b792fd200b9accf8f4b1724f7eab 287 SMART SM00382 97 233 3.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS01650 ace4b792fd200b9accf8f4b1724f7eab 287 SUPERFAMILY SSF52540 92 231 2.32E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01650 ace4b792fd200b9accf8f4b1724f7eab 287 Pfam PF01695 IstB-like ATP binding protein 54 229 1.8E-58 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 NHAM_RS01650 ace4b792fd200b9accf8f4b1724f7eab 287 PIRSF PIRSF003073 1 251 7.1E-72 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein NHAM_RS01650 ace4b792fd200b9accf8f4b1724f7eab 287 PANTHER PTHR30050:SF6 1 243 8.4E-115 T 22-04-2016 NHAM_RS01650 ace4b792fd200b9accf8f4b1724f7eab 287 PANTHER PTHR30050 1 243 8.4E-115 T 22-04-2016 NHAM_RS01650 ace4b792fd200b9accf8f4b1724f7eab 287 Gene3D G3DSA:3.40.50.300 94 230 4.5E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS20060 ace4b792fd200b9accf8f4b1724f7eab 287 SMART SM00382 97 233 3.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS20060 ace4b792fd200b9accf8f4b1724f7eab 287 SUPERFAMILY SSF52540 92 231 2.32E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS20060 ace4b792fd200b9accf8f4b1724f7eab 287 Pfam PF01695 IstB-like ATP binding protein 54 229 1.8E-58 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 NHAM_RS20060 ace4b792fd200b9accf8f4b1724f7eab 287 PIRSF PIRSF003073 1 251 7.1E-72 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein NHAM_RS20060 ace4b792fd200b9accf8f4b1724f7eab 287 PANTHER PTHR30050:SF6 1 243 8.4E-115 T 22-04-2016 NHAM_RS20060 ace4b792fd200b9accf8f4b1724f7eab 287 PANTHER PTHR30050 1 243 8.4E-115 T 22-04-2016 NHAM_RS20060 ace4b792fd200b9accf8f4b1724f7eab 287 Gene3D G3DSA:3.40.50.300 94 230 4.5E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03730 4a29a14b24aa7de552266373f87726d5 385 PANTHER PTHR30294 15 382 6.3E-115 T 22-04-2016 NHAM_RS03730 4a29a14b24aa7de552266373f87726d5 385 PANTHER PTHR30294:SF12 15 382 6.3E-115 T 22-04-2016 NHAM_RS03730 4a29a14b24aa7de552266373f87726d5 385 Pfam PF12698 ABC-2 family transporter protein 39 377 5.2E-44 T 22-04-2016 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 Pfam PF00549 CoA-ligase 151 274 1.5E-21 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 Pfam PF02629 CoA binding domain 6 99 8.3E-29 T 22-04-2016 IPR003781 CoA-binding GO:0048037 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 291 9.1E-135 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 SUPERFAMILY SSF52210 123 289 5.36E-52 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 SMART SM00881 4 100 7.9E-35 T 22-04-2016 IPR003781 CoA-binding GO:0048037 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 SUPERFAMILY SSF51735 1 122 1.97E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.9E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.9E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.9E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 PRINTS PR01798 Succinyl-CoA synthase signature 244 261 1.9E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 PIRSF PIRSF001553 1 294 1.3E-127 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 Gene3D G3DSA:3.40.50.261 120 290 1.9E-70 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 Gene3D G3DSA:3.40.50.720 2 119 4.1E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 PANTHER PTHR11117 1 293 9.8E-191 T 22-04-2016 NHAM_RS02820 e69ac27eac215c3723010c450576c593 294 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 240 253 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site NHAM_RS07325 717e9baeda523224228fb43dae8366e6 465 Gene3D G3DSA:3.30.565.10 318 464 3.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07325 717e9baeda523224228fb43dae8366e6 465 PANTHER PTHR24423 194 463 3.2E-41 T 22-04-2016 NHAM_RS07325 717e9baeda523224228fb43dae8366e6 465 PANTHER PTHR24423 1 13 3.2E-41 T 22-04-2016 NHAM_RS07325 717e9baeda523224228fb43dae8366e6 465 SUPERFAMILY SSF55874 317 463 9.72E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07325 717e9baeda523224228fb43dae8366e6 465 PANTHER PTHR24423:SF496 194 463 3.2E-41 T 22-04-2016 NHAM_RS07325 717e9baeda523224228fb43dae8366e6 465 PANTHER PTHR24423:SF496 1 13 3.2E-41 T 22-04-2016 NHAM_RS07325 717e9baeda523224228fb43dae8366e6 465 SUPERFAMILY SSF47384 235 301 3.14E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07325 717e9baeda523224228fb43dae8366e6 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 1.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07325 717e9baeda523224228fb43dae8366e6 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 1.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07325 717e9baeda523224228fb43dae8366e6 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 1.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07325 717e9baeda523224228fb43dae8366e6 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 463 1.7E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07325 717e9baeda523224228fb43dae8366e6 465 SMART SM00387 354 465 4.3E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS03865 0b8a4c472839af5501e38145a813d828 709 PANTHER PTHR32552 67 709 1.4E-42 T 22-04-2016 NHAM_RS03865 0b8a4c472839af5501e38145a813d828 709 Pfam PF00593 TonB dependent receptor 470 709 2.4E-21 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS03865 0b8a4c472839af5501e38145a813d828 709 SUPERFAMILY SSF56935 60 708 1.49E-88 T 22-04-2016 NHAM_RS03865 0b8a4c472839af5501e38145a813d828 709 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 709 1.2E-78 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NHAM_RS03865 0b8a4c472839af5501e38145a813d828 709 PANTHER PTHR32552:SF10 67 709 1.4E-42 T 22-04-2016 NHAM_RS03865 0b8a4c472839af5501e38145a813d828 709 Gene3D G3DSA:2.170.130.10 61 171 2.2E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS03865 0b8a4c472839af5501e38145a813d828 709 Gene3D G3DSA:2.40.170.20 177 708 8.2E-89 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS03865 0b8a4c472839af5501e38145a813d828 709 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 161 2.6E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS05630 89ef6a2178b51e8b8964d6e289f6255a 400 Pfam PF00155 Aminotransferase class I and II 32 392 1.1E-77 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NHAM_RS05630 89ef6a2178b51e8b8964d6e289f6255a 400 PANTHER PTHR11751:SF306 14 399 4.4E-171 T 22-04-2016 NHAM_RS05630 89ef6a2178b51e8b8964d6e289f6255a 400 SUPERFAMILY SSF53383 1 398 1.93E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS05630 89ef6a2178b51e8b8964d6e289f6255a 400 PANTHER PTHR11751 14 399 4.4E-171 T 22-04-2016 NHAM_RS05630 89ef6a2178b51e8b8964d6e289f6255a 400 Gene3D G3DSA:3.40.640.10 45 275 1.8E-75 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS05630 89ef6a2178b51e8b8964d6e289f6255a 400 Gene3D G3DSA:3.90.1150.10 276 399 1.1E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS03860 5f07d06f43615c4ce69813429469627c 288 SUPERFAMILY SSF53850 35 284 2.04E-36 T 22-04-2016 NHAM_RS03860 5f07d06f43615c4ce69813429469627c 288 PANTHER PTHR30632 30 284 1.2E-51 T 22-04-2016 NHAM_RS03860 5f07d06f43615c4ce69813429469627c 288 PANTHER PTHR30632:SF6 30 284 1.2E-51 T 22-04-2016 NHAM_RS03860 5f07d06f43615c4ce69813429469627c 288 Gene3D G3DSA:3.40.190.10 247 281 3.1E-4 T 22-04-2016 NHAM_RS03860 5f07d06f43615c4ce69813429469627c 288 Gene3D G3DSA:3.40.190.10 35 162 1.8E-20 T 22-04-2016 NHAM_RS03860 5f07d06f43615c4ce69813429469627c 288 Pfam PF13531 Bacterial extracellular solute-binding protein 36 282 7.4E-46 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 569 583 9.4E-5 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 599 615 9.4E-5 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 Gene3D G3DSA:3.40.50.880 526 714 3.7E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 TIGRFAM TIGR01815 TrpE-clade3: anthranilate synthase 14 713 5.6E-295 T 22-04-2016 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 SUPERFAMILY SSF56322 35 506 1.96E-109 T 22-04-2016 IPR005801 ADC synthase GO:0009058 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PRINTS PR00096 Glutamine amidotransferase superfamily signature 689 702 6.6E-11 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PRINTS PR00096 Glutamine amidotransferase superfamily signature 572 581 6.6E-11 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PRINTS PR00096 Glutamine amidotransferase superfamily signature 599 610 6.6E-11 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 SUPERFAMILY SSF52317 524 715 3.88E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 Gene3D G3DSA:3.60.120.10 44 509 8.8E-108 T 22-04-2016 IPR005801 ADC synthase GO:0009058 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PRINTS PR00097 Anthranilate synthase component II signature 644 656 4.4E-23 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PRINTS PR00097 Anthranilate synthase component II signature 624 632 4.4E-23 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PRINTS PR00097 Anthranilate synthase component II signature 572 581 4.4E-23 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PRINTS PR00097 Anthranilate synthase component II signature 528 542 4.4E-23 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PRINTS PR00097 Anthranilate synthase component II signature 599 610 4.4E-23 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PRINTS PR00097 Anthranilate synthase component II signature 689 702 4.4E-23 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 Pfam PF00425 chorismate binding enzyme 246 498 1.1E-61 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PANTHER PTHR11236 35 589 1.8E-262 T 22-04-2016 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 Pfam PF04715 Anthranilate synthase component I, N terminal region 123 202 1.0E-5 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 Pfam PF00117 Glutamine amidotransferase class-I 529 702 3.3E-41 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 528 711 5.6E-41 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PIRSF PIRSF036934 3 718 9.4E-300 T 22-04-2016 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NHAM_RS16590 5c61fd1b9aea21df1c77a616389bc84a 730 PANTHER PTHR11236:SF22 35 589 1.8E-262 T 22-04-2016 NHAM_RS12570 819dc7061f4c5b8d84afa30d662fb473 713 Pfam PF02706 Chain length determinant protein 34 206 1.0E-15 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 NHAM_RS12570 819dc7061f4c5b8d84afa30d662fb473 713 Gene3D G3DSA:3.40.50.300 551 669 1.0E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS12570 819dc7061f4c5b8d84afa30d662fb473 713 PANTHER PTHR32309:SF13 13 678 1.9E-124 T 22-04-2016 NHAM_RS12570 819dc7061f4c5b8d84afa30d662fb473 713 PANTHER PTHR32309 13 678 1.9E-124 T 22-04-2016 NHAM_RS12570 819dc7061f4c5b8d84afa30d662fb473 713 SUPERFAMILY SSF52540 551 669 6.73E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS20410 3d465af084d2d61adfe2c5b78c2d8a5c 461 PANTHER PTHR33678 32 448 5.4E-112 T 22-04-2016 NHAM_RS20410 3d465af084d2d61adfe2c5b78c2d8a5c 461 PANTHER PTHR33678:SF3 32 448 5.4E-112 T 22-04-2016 NHAM_RS20410 3d465af084d2d61adfe2c5b78c2d8a5c 461 Pfam PF03050 Transposase IS66 family 176 448 1.8E-79 T 22-04-2016 IPR004291 Transposase, IS66 NHAM_RS20410 3d465af084d2d61adfe2c5b78c2d8a5c 461 Pfam PF13007 Transposase C of IS166 homeodomain 32 109 1.9E-12 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain NHAM_RS20410 3d465af084d2d61adfe2c5b78c2d8a5c 461 Pfam PF13005 zinc-finger binding domain of transposase IS66 117 159 5.4E-15 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 Gene3D G3DSA:3.30.420.40 124 205 4.7E-5 T 22-04-2016 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 Hamap MF_00020 Acetate kinase [ackA]. 1 394 154.602 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 Pfam PF00871 Acetokinase family 4 384 2.0E-101 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 PIRSF PIRSF000722 1 393 2.7E-138 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 TIGRFAM TIGR00016 ackA: acetate kinase 3 389 1.8E-105 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 Gene3D G3DSA:3.30.420.40 206 389 1.5E-69 T 22-04-2016 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 PANTHER PTHR21060:SF11 1 399 4.1E-173 T 22-04-2016 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 SUPERFAMILY SSF53067 1 195 5.24E-55 T 22-04-2016 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 PANTHER PTHR21060 1 399 4.1E-173 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 SUPERFAMILY SSF53067 159 389 1.07E-76 T 22-04-2016 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 PRINTS PR00471 Acetate kinase family signature 297 310 4.0E-39 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 PRINTS PR00471 Acetate kinase family signature 203 224 4.0E-39 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 PRINTS PR00471 Acetate kinase family signature 319 335 4.0E-39 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 PRINTS PR00471 Acetate kinase family signature 4 15 4.0E-39 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 PRINTS PR00471 Acetate kinase family signature 371 383 4.0E-39 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS04480 4f9d8c72939de2d6ed1839ca78eab735 404 PRINTS PR00471 Acetate kinase family signature 174 187 4.0E-39 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 Gene3D G3DSA:2.10.109.10 183 238 2.0E-47 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 Gene3D G3DSA:2.10.109.10 29 113 2.0E-47 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 103 115 6.9E-24 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 33 49 6.9E-24 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 183 202 6.9E-24 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 226 5.2E-51 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 ProSitePatterns PS00761 Signal peptidases I signature 3. 188 201 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 PANTHER PTHR12383 8 65 5.3E-81 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 PANTHER PTHR12383 82 149 5.3E-81 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 PANTHER PTHR12383 165 226 5.3E-81 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 Pfam PF00717 Peptidase S24-like 40 126 2.7E-21 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 PANTHER PTHR12383:SF27 8 65 5.3E-81 T 22-04-2016 NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 PANTHER PTHR12383:SF27 82 149 5.3E-81 T 22-04-2016 NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 PANTHER PTHR12383:SF27 165 226 5.3E-81 T 22-04-2016 NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 SUPERFAMILY SSF51306 31 250 1.41E-64 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NHAM_RS11475 869b5d1df6486ceb9c7db67c0afd9a27 252 ProSitePatterns PS00760 Signal peptidases I lysine active site. 105 117 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 NHAM_RS07750 5c6889c9bccd82288f64b9657d84268c 229 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 229 46.043 T 22-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 NHAM_RS07750 5c6889c9bccd82288f64b9657d84268c 229 PANTHER PTHR41536:SF1 2 229 4.2E-129 T 22-04-2016 NHAM_RS07750 5c6889c9bccd82288f64b9657d84268c 229 SUPERFAMILY SSF51197 4 180 8.1E-5 T 22-04-2016 NHAM_RS07750 5c6889c9bccd82288f64b9657d84268c 229 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 178 3.6E-13 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 NHAM_RS07750 5c6889c9bccd82288f64b9657d84268c 229 PANTHER PTHR41536 2 229 4.2E-129 T 22-04-2016 NHAM_RS07750 5c6889c9bccd82288f64b9657d84268c 229 SMART SM00702 6 179 1.4E-18 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 Pfam PF00570 HRDC domain 529 595 6.0E-25 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 Pfam PF00271 Helicase conserved C-terminal domain 218 323 1.7E-15 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 Gene3D G3DSA:1.10.150.80 526 597 9.4E-22 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 Pfam PF00270 DEAD/DEAH box helicase 22 177 1.3E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 Pfam PF09382 RQC domain 398 509 2.6E-36 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 SMART SM00487 14 210 3.8E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 SMART SM00341 525 599 1.2E-18 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 SUPERFAMILY SSF52540 6 189 9.85E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 Gene3D G3DSA:1.10.10.10 337 508 3.7E-53 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 597 5.9E-239 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 Gene3D G3DSA:3.40.50.300 6 190 4.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 Pfam PF16124 RecQ zinc-binding 334 396 1.1E-14 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 PANTHER PTHR13710 1 598 4.3E-266 T 22-04-2016 NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 SUPERFAMILY SSF52540 200 451 2.44E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 SMART SM00490 242 323 2.8E-26 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 455 5.3E-150 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 Gene3D G3DSA:3.40.50.300 199 336 8.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 SUPERFAMILY SSF47819 524 598 4.36E-24 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 PANTHER PTHR13710:SF81 1 598 4.3E-266 T 22-04-2016 NHAM_RS17645 938003e0b3d2358d632106faf4bc6cac 599 SMART SM00956 403 506 1.1E-48 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 SUPERFAMILY SSF88697 281 371 2.65E-22 T 22-04-2016 IPR015947 PUA-like domain NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 Pfam PF00696 Amino acid kinase family 11 240 1.2E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 PANTHER PTHR11063:SF6 10 374 3.6E-113 T 22-04-2016 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 SUPERFAMILY SSF53633 10 260 1.31E-64 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 Pfam PF01472 PUA domain 282 354 8.2E-21 T 22-04-2016 IPR002478 PUA domain GO:0003723 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 10 263 34.971 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 Gene3D G3DSA:2.30.130.10 279 370 3.6E-27 T 22-04-2016 IPR015947 PUA-like domain NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 PANTHER PTHR11063 10 374 3.6E-113 T 22-04-2016 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 Gene3D G3DSA:3.40.1160.10 10 261 1.9E-53 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 PRINTS PR00474 Glutamate 5-kinase family signature 48 62 6.7E-48 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 PRINTS PR00474 Glutamate 5-kinase family signature 82 110 6.7E-48 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 PRINTS PR00474 Glutamate 5-kinase family signature 122 143 6.7E-48 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 PRINTS PR00474 Glutamate 5-kinase family signature 215 235 6.7E-48 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 PRINTS PR00474 Glutamate 5-kinase family signature 154 181 6.7E-48 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 370 2.3E-120 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 PIRSF PIRSF000729 5 372 4.6E-121 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 213 230 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 NHAM_RS02690 bb01b808bd44db844b17762b13e2ce9e 379 SMART SM00359 282 364 3.7E-17 T 22-04-2016 IPR002478 PUA domain GO:0003723 NHAM_RS09365 78b69a23e835e0591733512623a7fb8a 206 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 20 198 5.8E-49 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 NHAM_RS09365 78b69a23e835e0591733512623a7fb8a 206 PANTHER PTHR10429:SF0 3 205 3.7E-70 T 22-04-2016 NHAM_RS09365 78b69a23e835e0591733512623a7fb8a 206 SUPERFAMILY SSF50486 18 202 6.98E-62 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 NHAM_RS09365 78b69a23e835e0591733512623a7fb8a 206 Gene3D G3DSA:3.10.300.10 17 204 4.0E-63 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 NHAM_RS09365 78b69a23e835e0591733512623a7fb8a 206 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 21 198 30.348 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 NHAM_RS09365 78b69a23e835e0591733512623a7fb8a 206 PANTHER PTHR10429 3 205 3.7E-70 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 NHAM_RS09365 78b69a23e835e0591733512623a7fb8a 206 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 22 194 4.8E-61 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PANTHER PTHR11670 13 190 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PANTHER PTHR11670 213 405 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PANTHER PTHR11670 790 935 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PRINTS PR00415 Aconitase family signature 531 544 7.2E-41 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PRINTS PR00415 Aconitase family signature 384 398 7.2E-41 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PRINTS PR00415 Aconitase family signature 214 227 7.2E-41 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PRINTS PR00415 Aconitase family signature 172 180 7.2E-41 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PRINTS PR00415 Aconitase family signature 290 303 7.2E-41 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PRINTS PR00415 Aconitase family signature 228 243 7.2E-41 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PRINTS PR00415 Aconitase family signature 304 317 7.2E-41 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PRINTS PR00415 Aconitase family signature 148 161 7.2E-41 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PRINTS PR00415 Aconitase family signature 469 480 7.2E-41 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 Gene3D G3DSA:3.30.499.10 457 613 3.5E-65 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 Gene3D G3DSA:3.30.499.10 381 405 3.5E-65 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 Gene3D G3DSA:3.20.19.10 676 934 4.2E-70 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PANTHER PTHR11670 706 751 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PANTHER PTHR11670 454 689 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 ProSitePatterns PS01244 Aconitase family signature 2. 531 544 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 Pfam PF00694 Aconitase C-terminal domain 731 857 6.5E-43 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PANTHER PTHR11670:SF1 454 689 0.0 T 22-04-2016 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 Pfam PF00330 Aconitase family (aconitate hydratase) 71 600 1.2E-174 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PANTHER PTHR11670:SF1 213 405 0.0 T 22-04-2016 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PANTHER PTHR11670:SF1 706 751 0.0 T 22-04-2016 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 SUPERFAMILY SSF52016 669 935 2.35E-80 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 Gene3D G3DSA:3.40.1060.10 261 379 2.3E-33 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 SUPERFAMILY SSF53732 6 664 4.19E-219 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 Gene3D G3DSA:3.30.499.10 28 260 1.2E-75 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 ProSitePatterns PS00450 Aconitase family signature 1. 465 481 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 22 935 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PANTHER PTHR11670:SF1 13 190 0.0 T 22-04-2016 NHAM_RS04710 2adfe95e349f02c1e437c131e4f5c287 936 PANTHER PTHR11670:SF1 790 935 0.0 T 22-04-2016 NHAM_RS02005 05f73dca1e9496559bed4b8213679b1e 460 PANTHER PTHR11963:SF13 97 460 1.3E-138 T 22-04-2016 NHAM_RS02005 05f73dca1e9496559bed4b8213679b1e 460 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 308 315 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 NHAM_RS02005 05f73dca1e9496559bed4b8213679b1e 460 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 149 437 9.0E-96 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 NHAM_RS02005 05f73dca1e9496559bed4b8213679b1e 460 Gene3D G3DSA:3.40.630.10 139 458 1.8E-109 T 22-04-2016 NHAM_RS02005 05f73dca1e9496559bed4b8213679b1e 460 PANTHER PTHR11963 97 460 1.3E-138 T 22-04-2016 NHAM_RS02005 05f73dca1e9496559bed4b8213679b1e 460 SUPERFAMILY SSF53187 144 457 1.7E-101 T 22-04-2016 NHAM_RS02005 05f73dca1e9496559bed4b8213679b1e 460 PRINTS PR00481 Cytosol aminopeptidase signature 223 240 2.2E-41 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NHAM_RS02005 05f73dca1e9496559bed4b8213679b1e 460 PRINTS PR00481 Cytosol aminopeptidase signature 332 347 2.2E-41 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NHAM_RS02005 05f73dca1e9496559bed4b8213679b1e 460 PRINTS PR00481 Cytosol aminopeptidase signature 245 266 2.2E-41 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NHAM_RS02005 05f73dca1e9496559bed4b8213679b1e 460 PRINTS PR00481 Cytosol aminopeptidase signature 282 303 2.2E-41 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NHAM_RS02005 05f73dca1e9496559bed4b8213679b1e 460 PRINTS PR00481 Cytosol aminopeptidase signature 304 324 2.2E-41 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NHAM_RS04420 70c18fe05ceb202f4f6886f35af2bb8b 331 PRINTS PR00067 Catalase signature 305 331 6.6E-8 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04420 70c18fe05ceb202f4f6886f35af2bb8b 331 PRINTS PR00067 Catalase signature 43 65 6.6E-8 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04420 70c18fe05ceb202f4f6886f35af2bb8b 331 PRINTS PR00067 Catalase signature 274 301 6.6E-8 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04420 70c18fe05ceb202f4f6886f35af2bb8b 331 PRINTS PR00067 Catalase signature 80 98 6.6E-8 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04420 70c18fe05ceb202f4f6886f35af2bb8b 331 PANTHER PTHR11465:SF16 1 329 1.7E-57 T 22-04-2016 NHAM_RS04420 70c18fe05ceb202f4f6886f35af2bb8b 331 SMART SM01060 16 330 1.8E-7 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04420 70c18fe05ceb202f4f6886f35af2bb8b 331 SUPERFAMILY SSF56634 32 330 6.67E-75 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04420 70c18fe05ceb202f4f6886f35af2bb8b 331 PIRSF PIRSF000296 1 331 5.7E-121 T 22-04-2016 IPR024168 Catalase, SrpA-type, predicted NHAM_RS04420 70c18fe05ceb202f4f6886f35af2bb8b 331 Gene3D G3DSA:2.40.180.10 34 330 1.4E-84 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04420 70c18fe05ceb202f4f6886f35af2bb8b 331 PANTHER PTHR11465 1 329 1.7E-57 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS04420 70c18fe05ceb202f4f6886f35af2bb8b 331 Pfam PF00199 Catalase 48 329 1.4E-27 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS11620 7e192ee19262f360603f6158b18b0a5e 547 PANTHER PTHR10909:SF289 62 464 9.2E-188 T 22-04-2016 NHAM_RS11620 7e192ee19262f360603f6158b18b0a5e 547 PANTHER PTHR10909 62 464 9.2E-188 T 22-04-2016 NHAM_RS11620 7e192ee19262f360603f6158b18b0a5e 547 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 289 444 7.4E-30 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS11620 7e192ee19262f360603f6158b18b0a5e 547 SUPERFAMILY SSF56645 81 298 7.72E-35 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NHAM_RS11620 7e192ee19262f360603f6158b18b0a5e 547 SUPERFAMILY SSF47203 287 445 2.58E-40 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS11620 7e192ee19262f360603f6158b18b0a5e 547 Gene3D G3DSA:2.40.110.10 186 285 1.1E-22 T 22-04-2016 NHAM_RS11620 7e192ee19262f360603f6158b18b0a5e 547 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 403 422 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NHAM_RS11620 7e192ee19262f360603f6158b18b0a5e 547 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 188 200 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NHAM_RS11620 7e192ee19262f360603f6158b18b0a5e 547 Gene3D G3DSA:1.20.140.10 287 444 1.1E-38 T 22-04-2016 NHAM_RS11620 7e192ee19262f360603f6158b18b0a5e 547 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 186 278 6.9E-18 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NHAM_RS18250 e1725ad4f988544ddc54d610b168e73f 349 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS18250 e1725ad4f988544ddc54d610b168e73f 349 SUPERFAMILY SSF50331 243 344 7.37E-7 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal NHAM_RS18250 e1725ad4f988544ddc54d610b168e73f 349 PANTHER PTHR24220 4 327 9.1E-145 T 22-04-2016 NHAM_RS18250 e1725ad4f988544ddc54d610b168e73f 349 Pfam PF12857 TOBE-like domain 284 340 6.7E-14 T 22-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 NHAM_RS18250 e1725ad4f988544ddc54d610b168e73f 349 SMART SM00382 27 214 4.1E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS18250 e1725ad4f988544ddc54d610b168e73f 349 Gene3D G3DSA:3.40.50.300 3 239 7.6E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18250 e1725ad4f988544ddc54d610b168e73f 349 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 241 6.8E-114 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 NHAM_RS18250 e1725ad4f988544ddc54d610b168e73f 349 PANTHER PTHR24220:SF123 4 327 9.1E-145 T 22-04-2016 NHAM_RS18250 e1725ad4f988544ddc54d610b168e73f 349 Pfam PF00005 ABC transporter 18 164 3.7E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS18250 e1725ad4f988544ddc54d610b168e73f 349 SUPERFAMILY SSF52540 3 240 2.05E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 PIRSF PIRSF001435 30 238 5.6E-46 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 SMART SM00478 66 213 2.6E-49 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 SMART SM00525 214 234 0.0084 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 TIGRFAM TIGR01083 nth: endonuclease III 34 222 6.1E-77 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 215 231 4.5E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 PANTHER PTHR10359 8 238 9.9E-89 T 22-04-2016 NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 Gene3D G3DSA:1.10.1670.10 151 236 7.6E-33 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 62 195 4.1E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 PANTHER PTHR10359:SF18 8 238 9.9E-89 T 22-04-2016 NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 SUPERFAMILY SSF48150 34 234 1.73E-68 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 Gene3D G3DSA:1.10.340.30 51 150 3.6E-32 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 215 231 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site NHAM_RS00810 eb980d6ae8f62e1c8f47e806c154c263 238 Hamap MF_00942 Endonuclease III [nth]. 4 237 35.771 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 NHAM_RS04390 ef873cfabf1d11b651453f13fa5a7a36 292 SUPERFAMILY SSF56219 48 277 3.66E-35 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NHAM_RS04390 ef873cfabf1d11b651453f13fa5a7a36 292 PANTHER PTHR14859:SF0 47 203 5.9E-19 T 22-04-2016 NHAM_RS04390 ef873cfabf1d11b651453f13fa5a7a36 292 PANTHER PTHR14859 47 203 5.9E-19 T 22-04-2016 IPR027317 PGAP2-interacting protein NHAM_RS04390 ef873cfabf1d11b651453f13fa5a7a36 292 Gene3D G3DSA:3.60.10.10 49 202 3.6E-10 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NHAM_RS04390 ef873cfabf1d11b651453f13fa5a7a36 292 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 50 266 2.9E-14 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 PIRSF PIRSF000456 1 261 3.3E-100 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 Gene3D G3DSA:1.20.1180.10 208 253 1.1E-14 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 PANTHER PTHR23416:SF8 1 250 8.0E-109 T 22-04-2016 NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 SUPERFAMILY SSF51161 3 253 8.49E-69 T 22-04-2016 IPR011004 Trimeric LpxA-like NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 Gene3D G3DSA:2.160.10.10 3 87 1.5E-20 T 22-04-2016 NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 Gene3D G3DSA:2.160.10.10 88 207 7.0E-22 T 22-04-2016 NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 PANTHER PTHR23416 1 250 8.0E-109 T 22-04-2016 NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 259 41.013 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 258 7.2E-97 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 44 1.5E-6 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 139 7.7E-5 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS08705 6e4bdfefeffbc665045547848d951838 268 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 255 1.3E-18 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 NHAM_RS05255 516f19f860ae22c2ae0702268397bba8 504 Pfam PF05235 CHAD domain 226 455 2.2E-45 T 22-04-2016 IPR007899 CHAD domain NHAM_RS05255 516f19f860ae22c2ae0702268397bba8 504 Gene3D G3DSA:2.40.320.10 7 195 3.3E-15 T 22-04-2016 IPR023577 CYTH domain NHAM_RS05255 516f19f860ae22c2ae0702268397bba8 504 Pfam PF01928 CYTH domain 2 159 6.0E-9 T 22-04-2016 IPR023577 CYTH domain NHAM_RS05255 516f19f860ae22c2ae0702268397bba8 504 PANTHER PTHR39569 1 504 1.9E-24 T 22-04-2016 NHAM_RS05255 516f19f860ae22c2ae0702268397bba8 504 PANTHER PTHR39569:SF1 1 504 1.9E-24 T 22-04-2016 NHAM_RS05255 516f19f860ae22c2ae0702268397bba8 504 SMART SM00880 223 490 1.3E-64 T 22-04-2016 IPR007899 CHAD domain NHAM_RS05255 516f19f860ae22c2ae0702268397bba8 504 SMART SM01118 1 198 1.2E-15 T 22-04-2016 IPR023577 CYTH domain NHAM_RS05255 516f19f860ae22c2ae0702268397bba8 504 SUPERFAMILY SSF55154 2 199 4.74E-24 T 22-04-2016 IPR033469 CYTH-like domain NHAM_RS13225 3bd0073fc9aa91425bfb6ed1909bbea1 418 SUPERFAMILY SSF144052 16 418 3.92E-139 T 22-04-2016 NHAM_RS13225 3bd0073fc9aa91425bfb6ed1909bbea1 418 PANTHER PTHR34448:SF3 16 418 4.7E-217 T 22-04-2016 NHAM_RS13225 3bd0073fc9aa91425bfb6ed1909bbea1 418 PANTHER PTHR34448 16 418 4.7E-217 T 22-04-2016 NHAM_RS13225 3bd0073fc9aa91425bfb6ed1909bbea1 418 Pfam PF02073 Thermophilic metalloprotease (M29) 16 417 5.7E-160 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 NHAM_RS13225 3bd0073fc9aa91425bfb6ed1909bbea1 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 24 41 1.8E-69 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 NHAM_RS13225 3bd0073fc9aa91425bfb6ed1909bbea1 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 333 354 1.8E-69 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 NHAM_RS13225 3bd0073fc9aa91425bfb6ed1909bbea1 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 398 417 1.8E-69 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 NHAM_RS13225 3bd0073fc9aa91425bfb6ed1909bbea1 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 310 330 1.8E-69 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 NHAM_RS13225 3bd0073fc9aa91425bfb6ed1909bbea1 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 372 394 1.8E-69 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 NHAM_RS13225 3bd0073fc9aa91425bfb6ed1909bbea1 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 89 108 1.8E-69 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 NHAM_RS13225 3bd0073fc9aa91425bfb6ed1909bbea1 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 254 273 1.8E-69 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 NHAM_RS13225 3bd0073fc9aa91425bfb6ed1909bbea1 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 165 187 1.8E-69 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 NHAM_RS14435 ae2dfb0dc8379260f0bb3ef8f4757a00 316 SUPERFAMILY SSF46785 234 304 3.81E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS14435 ae2dfb0dc8379260f0bb3ef8f4757a00 316 PIRSF PIRSF019423 2 316 1.2E-142 T 22-04-2016 IPR011213 Nicotinic acid mononucleotide biosynthesis protein NHAM_RS14435 ae2dfb0dc8379260f0bb3ef8f4757a00 316 Gene3D G3DSA:3.90.79.10 205 238 1.4E-6 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS14435 ae2dfb0dc8379260f0bb3ef8f4757a00 316 Gene3D G3DSA:3.90.79.10 64 121 1.4E-6 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS14435 ae2dfb0dc8379260f0bb3ef8f4757a00 316 Gene3D G3DSA:1.10.10.10 239 305 7.9E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS14435 ae2dfb0dc8379260f0bb3ef8f4757a00 316 SUPERFAMILY SSF55811 20 124 1.52E-7 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS12100 5282a97acb89083a5f0c9579439f496f 70 Pfam PF05489 Phage Tail Protein X 3 57 2.3E-20 T 22-04-2016 IPR008861 Phage Tail Protein X-like NHAM_RS08575 5dad5f4902f4d91f7e6ee7871fe2e482 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.8E-28 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 NHAM_RS08575 5dad5f4902f4d91f7e6ee7871fe2e482 104 PANTHER PTHR30561 1 104 1.1E-52 T 22-04-2016 NHAM_RS08575 5dad5f4902f4d91f7e6ee7871fe2e482 104 SUPERFAMILY SSF103481 5 102 3.01E-18 T 22-04-2016 NHAM_RS08575 5dad5f4902f4d91f7e6ee7871fe2e482 104 PANTHER PTHR30561:SF0 1 104 1.1E-52 T 22-04-2016 NHAM_RS07940 d01784fc88c57131dcc2266d197c9c29 231 SMART SM00322 60 125 3.0E-9 T 22-04-2016 IPR004087 K Homology domain GO:0003676 NHAM_RS07940 d01784fc88c57131dcc2266d197c9c29 231 Gene3D G3DSA:3.30.300.20 17 107 8.2E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta NHAM_RS07940 d01784fc88c57131dcc2266d197c9c29 231 PANTHER PTHR11760 2 209 9.2E-132 T 22-04-2016 NHAM_RS07940 d01784fc88c57131dcc2266d197c9c29 231 Pfam PF07650 KH domain 39 111 8.8E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 NHAM_RS07940 d01784fc88c57131dcc2266d197c9c29 231 Gene3D G3DSA:3.30.1140.32 108 207 2.3E-46 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 NHAM_RS07940 d01784fc88c57131dcc2266d197c9c29 231 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 3.3E-95 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 NHAM_RS07940 d01784fc88c57131dcc2266d197c9c29 231 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.086 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 NHAM_RS07940 d01784fc88c57131dcc2266d197c9c29 231 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site NHAM_RS07940 d01784fc88c57131dcc2266d197c9c29 231 PANTHER PTHR11760:SF19 2 209 9.2E-132 T 22-04-2016 NHAM_RS07940 d01784fc88c57131dcc2266d197c9c29 231 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.9E-39 T 22-04-2016 NHAM_RS07940 d01784fc88c57131dcc2266d197c9c29 231 SUPERFAMILY SSF54814 2 106 2.15E-38 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 NHAM_RS07940 d01784fc88c57131dcc2266d197c9c29 231 SUPERFAMILY SSF54821 108 206 1.44E-40 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 NHAM_RS02210 cecd8910604c9b3a225bb7ca3a6616df 272 Gene3D G3DSA:3.40.50.10310 15 258 1.3E-71 T 22-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 NHAM_RS02210 cecd8910604c9b3a225bb7ca3a6616df 272 PANTHER PTHR35005 2 268 1.9E-54 T 22-04-2016 NHAM_RS02210 cecd8910604c9b3a225bb7ca3a6616df 272 Pfam PF02633 Creatinine amidohydrolase 23 252 7.3E-60 T 22-04-2016 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 NHAM_RS02210 cecd8910604c9b3a225bb7ca3a6616df 272 SUPERFAMILY SSF102215 23 258 1.31E-69 T 22-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 NHAM_RS02210 cecd8910604c9b3a225bb7ca3a6616df 272 PANTHER PTHR35005:SF1 2 268 1.9E-54 T 22-04-2016 NHAM_RS07090 78e20d2f537cceb4b22254c22b39a5e5 1269 Gene3D G3DSA:1.25.40.10 1048 1080 3.7E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS07090 78e20d2f537cceb4b22254c22b39a5e5 1269 Gene3D G3DSA:1.25.40.10 710 739 3.7E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS07090 78e20d2f537cceb4b22254c22b39a5e5 1269 Gene3D G3DSA:1.25.40.10 848 962 3.7E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS07090 78e20d2f537cceb4b22254c22b39a5e5 1269 Gene3D G3DSA:1.25.40.10 775 807 3.7E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS07090 78e20d2f537cceb4b22254c22b39a5e5 1269 Gene3D G3DSA:1.25.40.10 1113 1134 3.7E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS07090 78e20d2f537cceb4b22254c22b39a5e5 1269 SUPERFAMILY SSF48452 855 961 6.07E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS16835 0d9b74ffb37c088a5bed94bc71300e77 142 Gene3D G3DSA:1.10.10.10 1 130 1.2E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS16835 0d9b74ffb37c088a5bed94bc71300e77 142 SUPERFAMILY SSF46785 2 130 6.98E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS16835 0d9b74ffb37c088a5bed94bc71300e77 142 PANTHER PTHR33221:SF4 2 130 1.5E-48 T 22-04-2016 NHAM_RS16835 0d9b74ffb37c088a5bed94bc71300e77 142 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.4E-32 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type NHAM_RS16835 0d9b74ffb37c088a5bed94bc71300e77 142 Pfam PF02082 Transcriptional regulator 1 81 1.4E-21 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type NHAM_RS16835 0d9b74ffb37c088a5bed94bc71300e77 142 PANTHER PTHR33221 2 130 1.5E-48 T 22-04-2016 NHAM_RS03880 ff4655c7d5e8a5a13b975e3d795bcbbf 269 Gene3D G3DSA:3.30.1150.10 147 268 3.1E-20 T 22-04-2016 NHAM_RS03880 ff4655c7d5e8a5a13b975e3d795bcbbf 269 SUPERFAMILY SSF74653 170 268 2.16E-22 T 22-04-2016 NHAM_RS03880 ff4655c7d5e8a5a13b975e3d795bcbbf 269 SUPERFAMILY SSF74653 138 143 2.16E-22 T 22-04-2016 NHAM_RS03880 ff4655c7d5e8a5a13b975e3d795bcbbf 269 Pfam PF13103 TonB C terminal 182 261 2.9E-9 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 NHAM_RS03880 ff4655c7d5e8a5a13b975e3d795bcbbf 269 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 193 268 6.1E-15 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 NHAM_RS13550 3a8515bd318c7a2096a124de713268d4 420 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 93 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NHAM_RS13550 3a8515bd318c7a2096a124de713268d4 420 Pfam PF07690 Major Facilitator Superfamily 27 370 2.5E-33 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS13550 3a8515bd318c7a2096a124de713268d4 420 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 22 398 1.4E-72 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 NHAM_RS13550 3a8515bd318c7a2096a124de713268d4 420 SUPERFAMILY SSF103473 15 401 1.83E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS13550 3a8515bd318c7a2096a124de713268d4 420 PANTHER PTHR23502:SF19 22 406 6.6E-124 T 22-04-2016 NHAM_RS13550 3a8515bd318c7a2096a124de713268d4 420 PANTHER PTHR23502 22 406 6.6E-124 T 22-04-2016 NHAM_RS13550 3a8515bd318c7a2096a124de713268d4 420 Gene3D G3DSA:1.20.1250.20 23 208 3.8E-27 T 22-04-2016 NHAM_RS13550 3a8515bd318c7a2096a124de713268d4 420 Gene3D G3DSA:1.20.1250.20 223 402 2.1E-4 T 22-04-2016 NHAM_RS15335 64520f5aa827f4220d12f5469a21ac42 205 Pfam PF02669 K+-transporting ATPase, c chain 6 197 9.8E-77 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NHAM_RS15335 64520f5aa827f4220d12f5469a21ac42 205 PIRSF PIRSF001296 1 202 5.5E-79 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NHAM_RS15335 64520f5aa827f4220d12f5469a21ac42 205 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 198 37.515 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NHAM_RS15335 64520f5aa827f4220d12f5469a21ac42 205 PANTHER PTHR30042:SF2 1 205 3.2E-92 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NHAM_RS15335 64520f5aa827f4220d12f5469a21ac42 205 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 197 2.4E-70 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NHAM_RS15335 64520f5aa827f4220d12f5469a21ac42 205 PANTHER PTHR30042 1 205 3.2E-92 T 22-04-2016 NHAM_RS10195 111f3bb7dd6d8b04735bccd120635e18 746 SUPERFAMILY SSF52540 157 392 1.15E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10195 111f3bb7dd6d8b04735bccd120635e18 746 SUPERFAMILY SSF52540 16 218 1.61E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10195 111f3bb7dd6d8b04735bccd120635e18 746 Pfam PF00271 Helicase conserved C-terminal domain 271 382 1.2E-13 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS10195 111f3bb7dd6d8b04735bccd120635e18 746 PANTHER PTHR24031 249 391 1.6E-64 T 22-04-2016 NHAM_RS10195 111f3bb7dd6d8b04735bccd120635e18 746 PANTHER PTHR24031 17 203 1.6E-64 T 22-04-2016 NHAM_RS10195 111f3bb7dd6d8b04735bccd120635e18 746 SMART SM00490 295 383 1.5E-12 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS10195 111f3bb7dd6d8b04735bccd120635e18 746 PANTHER PTHR24031:SF122 249 391 1.6E-64 T 22-04-2016 NHAM_RS10195 111f3bb7dd6d8b04735bccd120635e18 746 PANTHER PTHR24031:SF122 17 203 1.6E-64 T 22-04-2016 NHAM_RS10195 111f3bb7dd6d8b04735bccd120635e18 746 SMART SM00487 29 237 5.4E-35 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS10195 111f3bb7dd6d8b04735bccd120635e18 746 Gene3D G3DSA:3.40.50.300 274 383 1.0E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10195 111f3bb7dd6d8b04735bccd120635e18 746 Gene3D G3DSA:3.40.50.300 16 222 1.0E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10195 111f3bb7dd6d8b04735bccd120635e18 746 Pfam PF00270 DEAD/DEAH box helicase 35 204 8.4E-27 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NHAM_RS14220 2361caef293530a3b06eebc74c9a4616 382 Gene3D G3DSA:3.40.50.2000 157 345 9.5E-34 T 22-04-2016 NHAM_RS14220 2361caef293530a3b06eebc74c9a4616 382 PANTHER PTHR12526 1 378 3.2E-51 T 22-04-2016 NHAM_RS14220 2361caef293530a3b06eebc74c9a4616 382 Pfam PF00534 Glycosyl transferases group 1 193 346 1.8E-32 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 NHAM_RS14220 2361caef293530a3b06eebc74c9a4616 382 Pfam PF13439 Glycosyltransferase Family 4 46 173 9.8E-7 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NHAM_RS14220 2361caef293530a3b06eebc74c9a4616 382 SUPERFAMILY SSF53756 4 370 2.83E-61 T 22-04-2016 NHAM_RS14220 2361caef293530a3b06eebc74c9a4616 382 PANTHER PTHR12526:SF397 1 378 3.2E-51 T 22-04-2016 NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 33 360 1.9E-76 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 PRINTS PR00954 Flagellar motor switch protein FliG signature 222 247 1.3E-56 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 PRINTS PR00954 Flagellar motor switch protein FliG signature 34 50 1.3E-56 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 PRINTS PR00954 Flagellar motor switch protein FliG signature 63 89 1.3E-56 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 1.3E-56 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 PRINTS PR00954 Flagellar motor switch protein FliG signature 299 325 1.3E-56 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 PRINTS PR00954 Flagellar motor switch protein FliG signature 275 295 1.3E-56 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 PRINTS PR00954 Flagellar motor switch protein FliG signature 142 165 1.3E-56 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 SUPERFAMILY SSF48029 35 142 2.88E-19 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 Gene3D G3DSA:1.10.220.30 224 358 1.0E-39 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 Pfam PF01706 FliG C-terminal domain 245 351 2.5E-37 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 Gene3D G3DSA:1.10.220.30 132 217 2.4E-27 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 Gene3D G3DSA:1.10.220.30 36 98 5.1E-12 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 PIRSF PIRSF003161 28 361 9.1E-116 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 Pfam PF14842 FliG N-terminal domain 34 135 4.9E-23 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 Pfam PF14841 FliG middle domain 144 217 1.2E-26 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 PANTHER PTHR30534:SF0 21 360 2.0E-93 T 22-04-2016 NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 SUPERFAMILY SSF48029 144 352 6.15E-62 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical NHAM_RS03580 d19059033935f12052a7a3b95e2c4cb9 362 PANTHER PTHR30534 21 360 2.0E-93 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NHAM_RS01165 f503eb660150c6916320db80b057a1a3 446 SUPERFAMILY SSF55874 281 434 7.6E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01165 f503eb660150c6916320db80b057a1a3 446 Gene3D G3DSA:3.30.565.10 283 434 4.0E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01165 f503eb660150c6916320db80b057a1a3 446 PANTHER PTHR24423 207 434 9.9E-38 T 22-04-2016 NHAM_RS01165 f503eb660150c6916320db80b057a1a3 446 SMART SM00387 319 434 2.3E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01165 f503eb660150c6916320db80b057a1a3 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 8.2E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01165 f503eb660150c6916320db80b057a1a3 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 8.2E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01165 f503eb660150c6916320db80b057a1a3 446 Gene3D G3DSA:1.10.287.130 205 275 6.2E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01165 f503eb660150c6916320db80b057a1a3 446 SMART SM00388 209 280 9.8E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01165 f503eb660150c6916320db80b057a1a3 446 SUPERFAMILY SSF47384 201 276 1.84E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01165 f503eb660150c6916320db80b057a1a3 446 PANTHER PTHR24423:SF474 207 434 9.9E-38 T 22-04-2016 NHAM_RS01165 f503eb660150c6916320db80b057a1a3 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 279 5.3E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01165 f503eb660150c6916320db80b057a1a3 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 431 5.7E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS15125 5fc5a8aa7db8bb78b593a7098f6f0a22 226 Pfam PF01925 Sulfite exporter TauE/SafE 17 221 3.6E-23 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NHAM_RS19105 a9bbecbd71c5b1276f93f3b50ed9adca 185 Gene3D G3DSA:1.20.144.10 3 172 3.7E-27 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS19105 a9bbecbd71c5b1276f93f3b50ed9adca 185 Pfam PF01569 PAP2 superfamily 61 171 7.7E-14 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS19105 a9bbecbd71c5b1276f93f3b50ed9adca 185 PANTHER PTHR14969:SF20 20 184 1.5E-21 T 22-04-2016 NHAM_RS19105 a9bbecbd71c5b1276f93f3b50ed9adca 185 SUPERFAMILY SSF48317 7 172 1.57E-34 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS19105 a9bbecbd71c5b1276f93f3b50ed9adca 185 SMART SM00014 58 168 4.3E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS19105 a9bbecbd71c5b1276f93f3b50ed9adca 185 PANTHER PTHR14969 20 184 1.5E-21 T 22-04-2016 NHAM_RS08255 00b3bb6f821356eb95f43429293431a1 73 TIGRFAM TIGR04111 BcepMu_gp16: phage-associated protein, BcepMu gp16 family 3 57 8.3E-26 T 22-04-2016 IPR026365 Phage-associated protein, BcepMu gp16 family NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 SMART SM00878 335 440 1.2E-61 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 Gene3D G3DSA:3.40.50.20 1 129 7.2E-52 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 Gene3D G3DSA:3.30.470.20 203 442 2.7E-93 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.4E-44 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 1.6E-212 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 3.3E-37 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 SUPERFAMILY SSF52440 1 113 4.53E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 SUPERFAMILY SSF51246 330 443 2.46E-41 T 22-04-2016 IPR011054 Rudiment single hybrid motif NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 7.6E-74 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 SUPERFAMILY SSF56059 83 345 7.24E-67 T 22-04-2016 NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 Gene3D G3DSA:3.30.1490.20 130 202 1.9E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS11145 21b82cc8a7990ef993cbfe209a7d2a60 451 PANTHER PTHR18866 1 446 1.1E-279 T 22-04-2016 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 SMART SM01240 12 483 0.0 T 22-04-2016 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 Gene3D G3DSA:3.20.20.70 10 494 7.0E-199 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 13 483 1.9E-156 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 PANTHER PTHR11911:SF6 8 291 5.1E-232 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 PANTHER PTHR11911:SF6 309 494 5.1E-232 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 PIRSF PIRSF000130 1 497 1.4E-200 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 SMART SM00116 101 154 1.2E-9 T 22-04-2016 IPR000644 CBS domain NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 SMART SM00116 167 215 1.7E-7 T 22-04-2016 IPR000644 CBS domain NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 PANTHER PTHR11911 8 291 5.1E-232 T 22-04-2016 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 PANTHER PTHR11911 309 494 5.1E-232 T 22-04-2016 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 SUPERFAMILY SSF54631 98 215 1.52E-29 T 22-04-2016 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 13 496 84.237 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 13 464 2.4E-195 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 SUPERFAMILY SSF51412 9 95 1.96E-122 T 22-04-2016 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 SUPERFAMILY SSF51412 226 487 1.96E-122 T 22-04-2016 NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 Pfam PF00571 CBS domain 98 151 1.1E-8 T 22-04-2016 IPR000644 CBS domain NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 Pfam PF00571 CBS domain 159 213 1.9E-6 T 22-04-2016 IPR000644 CBS domain NHAM_RS13020 38bd1d88a46790ce4a81931fae134569 498 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 304 316 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 NHAM_RS11285 b98db566a9cc81b7b4b00f16a9e9733e 402 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 402 48.152 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 NHAM_RS11285 b98db566a9cc81b7b4b00f16a9e9733e 402 SUPERFAMILY SSF56762 24 402 9.68E-138 T 22-04-2016 IPR029014 NiFe hydrogenase-like NHAM_RS11285 b98db566a9cc81b7b4b00f16a9e9733e 402 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 51 62 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 NHAM_RS11285 b98db566a9cc81b7b4b00f16a9e9733e 402 PANTHER PTHR11993:SF10 12 397 2.7E-242 T 22-04-2016 NHAM_RS11285 b98db566a9cc81b7b4b00f16a9e9733e 402 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 128 402 1.7E-120 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 NHAM_RS11285 b98db566a9cc81b7b4b00f16a9e9733e 402 Gene3D G3DSA:1.10.645.10 10 394 4.3E-67 T 22-04-2016 IPR029014 NiFe hydrogenase-like NHAM_RS11285 b98db566a9cc81b7b4b00f16a9e9733e 402 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 14 402 3.8E-177 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 NHAM_RS11285 b98db566a9cc81b7b4b00f16a9e9733e 402 PANTHER PTHR11993 12 397 2.7E-242 T 22-04-2016 NHAM_RS15565 f7149af195ff1b4f9d33641bcf09be4a 379 Gene3D G3DSA:3.90.1150.10 257 378 6.2E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS15565 f7149af195ff1b4f9d33641bcf09be4a 379 PIRSF PIRSF000390 1 379 9.8E-105 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NHAM_RS15565 f7149af195ff1b4f9d33641bcf09be4a 379 SUPERFAMILY SSF53383 2 378 2.55E-105 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS15565 f7149af195ff1b4f9d33641bcf09be4a 379 PANTHER PTHR30244 1 379 4.9E-118 T 22-04-2016 NHAM_RS15565 f7149af195ff1b4f9d33641bcf09be4a 379 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 11 373 1.5E-111 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NHAM_RS15565 f7149af195ff1b4f9d33641bcf09be4a 379 Gene3D G3DSA:3.40.640.10 2 255 4.2E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS15565 f7149af195ff1b4f9d33641bcf09be4a 379 PANTHER PTHR30244:SF16 1 379 4.9E-118 T 22-04-2016 NHAM_RS14645 5ed424d6be98ce93a9bc41694a1c00f8 359 PANTHER PTHR30349 70 350 1.5E-13 T 22-04-2016 NHAM_RS14645 5ed424d6be98ce93a9bc41694a1c00f8 359 SUPERFAMILY SSF56349 67 322 1.37E-39 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS14645 5ed424d6be98ce93a9bc41694a1c00f8 359 Gene3D G3DSA:1.10.150.130 67 164 2.3E-5 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS14645 5ed424d6be98ce93a9bc41694a1c00f8 359 Gene3D G3DSA:1.10.443.10 167 324 3.6E-24 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS14645 5ed424d6be98ce93a9bc41694a1c00f8 359 PANTHER PTHR30349:SF20 70 350 1.5E-13 T 22-04-2016 NHAM_RS14645 5ed424d6be98ce93a9bc41694a1c00f8 359 Pfam PF00589 Phage integrase family 183 323 2.6E-13 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS16155 58966ed6d48abb3084233db7630141ec 230 PANTHER PTHR11240 1 227 5.6E-28 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 NHAM_RS16155 58966ed6d48abb3084233db7630141ec 230 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 77 84 - T 22-04-2016 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 NHAM_RS16155 58966ed6d48abb3084233db7630141ec 230 SUPERFAMILY SSF55895 37 227 3.53E-39 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 NHAM_RS16155 58966ed6d48abb3084233db7630141ec 230 Gene3D G3DSA:3.90.730.10 37 227 2.3E-37 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 NHAM_RS16155 58966ed6d48abb3084233db7630141ec 230 Pfam PF00445 Ribonuclease T2 family 41 209 1.1E-13 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 SUPERFAMILY SSF52172 4 189 3.7E-39 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 Pfam PF00072 Response regulator receiver domain 5 116 1.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 Pfam PF02954 Bacterial regulatory protein, Fis family 446 484 2.3E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 SMART SM00448 3 117 1.8E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 SUPERFAMILY SSF46689 406 485 5.38E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 PANTHER PTHR32071 419 486 3.5E-199 T 22-04-2016 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 PANTHER PTHR32071 1 397 3.5E-199 T 22-04-2016 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 Pfam PF00158 Sigma-54 interaction domain 146 312 4.7E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 Gene3D G3DSA:1.10.10.60 441 483 1.1E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 SMART SM00382 166 313 3.2E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 Gene3D G3DSA:1.10.8.60 320 388 1.1E-22 T 22-04-2016 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 Gene3D G3DSA:3.40.50.300 143 318 1.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 Gene3D G3DSA:3.40.50.2300 2 140 1.3E-30 T 22-04-2016 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 PANTHER PTHR32071:SF18 419 486 3.5E-199 T 22-04-2016 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 PANTHER PTHR32071:SF18 1 397 3.5E-199 T 22-04-2016 NHAM_RS06255 2055ac01ddf3cf05ef5d0eab7e268f2d 492 SUPERFAMILY SSF52540 145 388 2.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00785 a2e1fd348fe6ededa66efe579220528d 200 SUPERFAMILY SSF53335 21 171 5.17E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS00785 a2e1fd348fe6ededa66efe579220528d 200 PANTHER PTHR11727:SF14 15 151 2.2E-18 T 22-04-2016 NHAM_RS00785 a2e1fd348fe6ededa66efe579220528d 200 SMART SM00650 43 173 0.0041 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 NHAM_RS00785 a2e1fd348fe6ededa66efe579220528d 200 Gene3D G3DSA:3.40.50.150 41 144 4.4E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS00785 a2e1fd348fe6ededa66efe579220528d 200 Pfam PF00398 Ribosomal RNA adenine dimethylase 52 113 2.1E-8 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm NHAM_RS00785 a2e1fd348fe6ededa66efe579220528d 200 PANTHER PTHR11727 15 151 2.2E-18 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm NHAM_RS00785 a2e1fd348fe6ededa66efe579220528d 200 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 59 89 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 NHAM_RS18805 dde58d6cff534092758580290ccdfa64 156 SMART SM00347 37 137 1.1E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS18805 dde58d6cff534092758580290ccdfa64 156 Gene3D G3DSA:1.10.10.10 9 140 1.4E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS18805 dde58d6cff534092758580290ccdfa64 156 Pfam PF12802 MarR family 43 101 1.0E-7 T 22-04-2016 NHAM_RS18805 dde58d6cff534092758580290ccdfa64 156 PANTHER PTHR33164:SF1 17 155 1.1E-22 T 22-04-2016 NHAM_RS18805 dde58d6cff534092758580290ccdfa64 156 PANTHER PTHR33164 17 155 1.1E-22 T 22-04-2016 NHAM_RS18805 dde58d6cff534092758580290ccdfa64 156 SUPERFAMILY SSF46785 14 147 8.85E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS08790 d6c1283c8b68c24f433c2d84c577c324 384 Pfam PF05065 Phage capsid family 105 381 1.3E-80 T 22-04-2016 IPR024455 Phage capsid NHAM_RS08790 d6c1283c8b68c24f433c2d84c577c324 384 SUPERFAMILY SSF56563 100 382 1.7E-72 T 22-04-2016 NHAM_RS08790 d6c1283c8b68c24f433c2d84c577c324 384 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 12 381 3.0E-105 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 NHAM_RS07650 7db3b245ee1b1d3ca83ce9e8a1666175 276 SUPERFAMILY SSF103088 157 263 3.66E-18 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS07650 7db3b245ee1b1d3ca83ce9e8a1666175 276 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 56 8.4E-19 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain NHAM_RS07650 7db3b245ee1b1d3ca83ce9e8a1666175 276 PANTHER PTHR30329:SF2 1 276 1.8E-105 T 22-04-2016 NHAM_RS07650 7db3b245ee1b1d3ca83ce9e8a1666175 276 PANTHER PTHR30329 1 276 1.8E-105 T 22-04-2016 NHAM_RS07650 7db3b245ee1b1d3ca83ce9e8a1666175 276 Pfam PF00691 OmpA family 161 246 2.7E-9 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS07650 7db3b245ee1b1d3ca83ce9e8a1666175 276 Gene3D G3DSA:3.30.1330.60 153 263 5.9E-16 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS10210 d8731bb56050c423886e2fcf17e5a69e 547 Gene3D G3DSA:3.40.50.980 24 133 2.3E-30 T 22-04-2016 NHAM_RS10210 d8731bb56050c423886e2fcf17e5a69e 547 Gene3D G3DSA:3.40.50.980 174 198 2.3E-30 T 22-04-2016 NHAM_RS10210 d8731bb56050c423886e2fcf17e5a69e 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 529 1.9E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NHAM_RS10210 d8731bb56050c423886e2fcf17e5a69e 547 PANTHER PTHR24095:SF169 10 536 1.3E-251 T 22-04-2016 NHAM_RS10210 d8731bb56050c423886e2fcf17e5a69e 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 22-04-2016 IPR020845 AMP-binding, conserved site NHAM_RS10210 d8731bb56050c423886e2fcf17e5a69e 547 SUPERFAMILY SSF56801 16 540 1.7E-137 T 22-04-2016 NHAM_RS10210 d8731bb56050c423886e2fcf17e5a69e 547 Gene3D G3DSA:3.30.300.30 443 541 7.2E-31 T 22-04-2016 NHAM_RS10210 d8731bb56050c423886e2fcf17e5a69e 547 Gene3D G3DSA:2.30.38.10 372 436 1.1E-19 T 22-04-2016 NHAM_RS10210 d8731bb56050c423886e2fcf17e5a69e 547 PANTHER PTHR24095 10 536 1.3E-251 T 22-04-2016 NHAM_RS10210 d8731bb56050c423886e2fcf17e5a69e 547 Pfam PF00501 AMP-binding enzyme 27 446 1.9E-89 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NHAM_RS10210 d8731bb56050c423886e2fcf17e5a69e 547 Gene3D G3DSA:3.40.50.980 199 340 7.8E-27 T 22-04-2016 NHAM_RS13410 c4b0970a8c6e4999a2f925b5f03e29cc 695 Pfam PF00593 TonB dependent receptor 470 687 8.2E-34 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS13410 c4b0970a8c6e4999a2f925b5f03e29cc 695 SUPERFAMILY SSF56935 94 689 1.83E-104 T 22-04-2016 NHAM_RS13410 c4b0970a8c6e4999a2f925b5f03e29cc 695 Gene3D G3DSA:2.40.170.20 216 689 5.9E-77 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS13410 c4b0970a8c6e4999a2f925b5f03e29cc 695 PANTHER PTHR32552 10 48 4.4E-46 T 22-04-2016 NHAM_RS13410 c4b0970a8c6e4999a2f925b5f03e29cc 695 PANTHER PTHR32552 97 691 4.4E-46 T 22-04-2016 NHAM_RS13410 c4b0970a8c6e4999a2f925b5f03e29cc 695 Pfam PF07715 TonB-dependent Receptor Plug Domain 107 213 3.4E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS13410 c4b0970a8c6e4999a2f925b5f03e29cc 695 Gene3D G3DSA:2.170.130.10 93 215 1.4E-34 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS11295 8f2fac68f0bdc3cf9d9063aa6dfc0860 204 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 57 198 8.7E-72 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 NHAM_RS11295 8f2fac68f0bdc3cf9d9063aa6dfc0860 204 SUPERFAMILY SSF56770 55 199 1.83E-64 T 22-04-2016 NHAM_RS11295 8f2fac68f0bdc3cf9d9063aa6dfc0860 204 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 83 190 5.9E-23 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 NHAM_RS11295 8f2fac68f0bdc3cf9d9063aa6dfc0860 204 Gene3D G3DSA:3.40.50.700 69 195 6.3E-32 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 NHAM_RS11295 8f2fac68f0bdc3cf9d9063aa6dfc0860 204 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 46 197 38.873 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 NHAM_RS11295 8f2fac68f0bdc3cf9d9063aa6dfc0860 204 PANTHER PTHR11995:SF22 16 204 1.2E-131 T 22-04-2016 NHAM_RS11295 8f2fac68f0bdc3cf9d9063aa6dfc0860 204 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 164 180 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 NHAM_RS11295 8f2fac68f0bdc3cf9d9063aa6dfc0860 204 PANTHER PTHR11995 16 204 1.2E-131 T 22-04-2016 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 SUPERFAMILY SSF51735 8 203 1.69E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 341 367 3.3E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 180 208 3.3E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 156 169 3.3E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 232 249 3.3E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 250 266 3.3E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 17 200 4.5E-57 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 Gene3D G3DSA:3.30.360.10 200 501 1.2E-113 T 22-04-2016 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 Gene3D G3DSA:3.40.50.720 11 199 4.1E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 13 502 78.99 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 PIRSF PIRSF000110 2 504 4.1E-167 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 PANTHER PTHR23429:SF0 5 502 1.6E-223 T 22-04-2016 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 SUPERFAMILY SSF55347 190 501 1.6E-107 T 22-04-2016 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 202 501 2.4E-109 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 PANTHER PTHR23429 5 502 1.6E-223 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 13 502 4.5E-179 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NHAM_RS16760 d41f50264f35151d6d89126428d8fdc3 504 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 190 196 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 NHAM_RS08540 10d9102c0943aa7d48be14cf4c982f41 251 PANTHER PTHR24220:SF400 8 249 2.4E-155 T 22-04-2016 NHAM_RS08540 10d9102c0943aa7d48be14cf4c982f41 251 Gene3D G3DSA:3.40.50.300 4 246 4.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08540 10d9102c0943aa7d48be14cf4c982f41 251 PANTHER PTHR24220 8 249 2.4E-155 T 22-04-2016 NHAM_RS08540 10d9102c0943aa7d48be14cf4c982f41 251 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 247 6.8E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NHAM_RS08540 10d9102c0943aa7d48be14cf4c982f41 251 Pfam PF00005 ABC transporter 23 178 1.1E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS08540 10d9102c0943aa7d48be14cf4c982f41 251 SMART SM00382 31 225 2.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS08540 10d9102c0943aa7d48be14cf4c982f41 251 SUPERFAMILY SSF52540 5 247 9.63E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS12945 b6f8a04b1854b28dc3715788064d50b5 69 PRINTS PR00050 Cold shock protein signature 40 58 2.5E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS12945 b6f8a04b1854b28dc3715788064d50b5 69 PRINTS PR00050 Cold shock protein signature 4 19 2.5E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS12945 b6f8a04b1854b28dc3715788064d50b5 69 PRINTS PR00050 Cold shock protein signature 25 34 2.5E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS12945 b6f8a04b1854b28dc3715788064d50b5 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site NHAM_RS12945 b6f8a04b1854b28dc3715788064d50b5 69 PIRSF PIRSF002599 1 69 9.9E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 NHAM_RS12945 b6f8a04b1854b28dc3715788064d50b5 69 SUPERFAMILY SSF50249 1 68 2.79E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS12945 b6f8a04b1854b28dc3715788064d50b5 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 67 1.0E-23 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS12945 b6f8a04b1854b28dc3715788064d50b5 69 Gene3D G3DSA:2.40.50.140 1 67 6.3E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS12945 b6f8a04b1854b28dc3715788064d50b5 69 PANTHER PTHR11544 1 51 4.1E-21 T 22-04-2016 NHAM_RS12945 b6f8a04b1854b28dc3715788064d50b5 69 SMART SM00357 3 69 2.1E-23 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS17470 648e3d3048bb69e12bf149a28246590e 434 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 191 423 1.1E-65 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 NHAM_RS17470 648e3d3048bb69e12bf149a28246590e 434 PANTHER PTHR11098 1 423 1.1E-190 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 NHAM_RS17470 648e3d3048bb69e12bf149a28246590e 434 PIRSF PIRSF000484 10 428 8.0E-64 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 NHAM_RS17470 648e3d3048bb69e12bf149a28246590e 434 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 17 427 39.291 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 NHAM_RS17470 648e3d3048bb69e12bf149a28246590e 434 Gene3D G3DSA:3.20.140.10 2 409 2.7E-144 T 22-04-2016 NHAM_RS17470 648e3d3048bb69e12bf149a28246590e 434 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 20 422 5.8E-90 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 NHAM_RS17470 648e3d3048bb69e12bf149a28246590e 434 SUPERFAMILY SSF54675 2 157 3.24E-48 T 22-04-2016 NHAM_RS17470 648e3d3048bb69e12bf149a28246590e 434 PANTHER PTHR11098:SF16 1 423 1.1E-190 T 22-04-2016 NHAM_RS17470 648e3d3048bb69e12bf149a28246590e 434 SUPERFAMILY SSF51690 139 423 1.02E-84 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 SUPERFAMILY SSF48452 137 274 6.33E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 Pfam PF14561 Tetratricopeptide repeat 220 309 2.3E-31 T 22-04-2016 NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 ProSitePatterns PS00194 Thioredoxin family active site. 40 58 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 Gene3D G3DSA:3.40.30.10 10 127 9.3E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 Gene3D G3DSA:1.25.40.10 224 309 1.0E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 Pfam PF00085 Thioredoxin 20 125 7.5E-20 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 Gene3D G3DSA:1.25.40.10 137 221 6.7E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 SUPERFAMILY SSF52833 11 128 3.06E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 PANTHER PTHR10438 13 129 1.8E-34 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 PANTHER PTHR10438:SF282 251 272 1.8E-34 T 22-04-2016 NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 PANTHER PTHR10438:SF282 13 129 1.8E-34 T 22-04-2016 NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 PANTHER PTHR10438 251 272 1.8E-34 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NHAM_RS00405 dbaa19290c56ac852358ba91cea2f47c 310 Pfam PF14559 Tetratricopeptide repeat 151 214 6.6E-12 T 22-04-2016 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 PANTHER PTHR11451:SF3 241 438 6.7E-130 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 PANTHER PTHR11451:SF3 4 216 6.7E-130 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 439 62.604 T 22-04-2016 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 Gene3D G3DSA:3.30.930.10 263 340 4.6E-92 T 22-04-2016 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 Gene3D G3DSA:3.30.930.10 6 204 4.6E-92 T 22-04-2016 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 SUPERFAMILY SSF52954 336 438 3.62E-28 T 22-04-2016 IPR004154 Anticodon-binding NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 PANTHER PTHR11451 241 438 6.7E-130 T 22-04-2016 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 PANTHER PTHR11451 4 216 6.7E-130 T 22-04-2016 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 Gene3D G3DSA:3.40.50.800 342 437 6.1E-26 T 22-04-2016 IPR004154 Anticodon-binding NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 Pfam PF03129 Anticodon binding domain 348 437 7.5E-20 T 22-04-2016 IPR004154 Anticodon-binding NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 222 9.2E-96 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 329 2.6E-33 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 SUPERFAMILY SSF55681 279 350 2.07E-85 T 22-04-2016 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 SUPERFAMILY SSF55681 10 238 2.07E-85 T 22-04-2016 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.8E-14 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.8E-14 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.8E-14 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NHAM_RS11180 4166c9644cb98f67c18746a39725feca 439 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.8E-14 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NHAM_RS13950 d21b097aa30ea03b30083ce772825e90 592 PANTHER PTHR18968 1 575 0.0 T 22-04-2016 NHAM_RS13950 d21b097aa30ea03b30083ce772825e90 592 Gene3D G3DSA:3.40.50.970 372 579 2.4E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS13950 d21b097aa30ea03b30083ce772825e90 592 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 203 340 6.1E-45 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 NHAM_RS13950 d21b097aa30ea03b30083ce772825e90 592 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 12 571 1.7E-238 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS13950 d21b097aa30ea03b30083ce772825e90 592 Gene3D G3DSA:3.40.50.1220 196 371 2.0E-64 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NHAM_RS13950 d21b097aa30ea03b30083ce772825e90 592 Gene3D G3DSA:3.40.50.970 11 184 2.4E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS13950 d21b097aa30ea03b30083ce772825e90 592 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 402 549 2.5E-46 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NHAM_RS13950 d21b097aa30ea03b30083ce772825e90 592 SUPERFAMILY SSF52518 9 185 5.05E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS13950 d21b097aa30ea03b30083ce772825e90 592 SUPERFAMILY SSF52467 195 367 2.84E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain NHAM_RS13950 d21b097aa30ea03b30083ce772825e90 592 SUPERFAMILY SSF52518 380 575 4.05E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS13950 d21b097aa30ea03b30083ce772825e90 592 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 175 9.0E-60 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 NHAM_RS13950 d21b097aa30ea03b30083ce772825e90 592 PANTHER PTHR18968:SF116 1 575 0.0 T 22-04-2016 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 SUPERFAMILY SSF57716 235 289 1.8E-13 T 22-04-2016 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 SMART SM00898 2 125 9.4E-51 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 141 236 4.0E-20 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 SUPERFAMILY SSF81624 2 150 1.7E-36 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 124 6.5E-33 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 SMART SM01232 141 239 3.4E-41 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 PANTHER PTHR22993:SF15 1 289 5.1E-108 T 22-04-2016 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 PANTHER PTHR22993 1 289 5.1E-108 T 22-04-2016 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 Pfam PF06827 Zinc finger found in FPG and IleRS 259 289 8.8E-7 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 289 40.751 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 288 7.2E-76 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 Gene3D G3DSA:1.10.8.50 142 289 5.4E-44 T 22-04-2016 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 SUPERFAMILY SSF46946 141 235 1.62E-25 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 NHAM_RS05125 f44a8b5a55f157f43ed043e819b39157 289 Gene3D G3DSA:3.20.190.10 2 141 1.2E-36 T 22-04-2016 NHAM_RS11425 8d4d952773b49e275db2078f39f93392 257 SUPERFAMILY SSF55729 80 244 1.17E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS11425 8d4d952773b49e275db2078f39f93392 257 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 17 87 1.5E-14 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 NHAM_RS11425 8d4d952773b49e275db2078f39f93392 257 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 3 246 43.54 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic NHAM_RS11425 8d4d952773b49e275db2078f39f93392 257 PANTHER PTHR21367 18 249 4.7E-79 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase NHAM_RS11425 8d4d952773b49e275db2078f39f93392 257 PANTHER PTHR21367:SF0 18 249 4.7E-79 T 22-04-2016 NHAM_RS11425 8d4d952773b49e275db2078f39f93392 257 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 237 7.3E-36 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 NHAM_RS11425 8d4d952773b49e275db2078f39f93392 257 PIRSF PIRSF037208 1 256 3.1E-84 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic NHAM_RS11860 1123b430e0a1c6e882a5093021d87ca0 493 PANTHER PTHR30508:SF1 2 493 2.1E-302 T 22-04-2016 NHAM_RS11860 1123b430e0a1c6e882a5093021d87ca0 493 SUPERFAMILY SSF101960 39 490 8.5E-134 T 22-04-2016 NHAM_RS11860 1123b430e0a1c6e882a5093021d87ca0 493 PANTHER PTHR30508 2 493 2.1E-302 T 22-04-2016 NHAM_RS11860 1123b430e0a1c6e882a5093021d87ca0 493 Pfam PF01458 Uncharacterized protein family (UPF0051) 231 464 1.9E-63 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 NHAM_RS11860 1123b430e0a1c6e882a5093021d87ca0 493 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 18 484 2.1E-186 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 NHAM_RS15005 c3e99c0b51a547f47c8c37f90397ba2c 410 SUPERFAMILY SSF111369 209 251 1.27E-6 T 22-04-2016 NHAM_RS15005 c3e99c0b51a547f47c8c37f90397ba2c 410 SUPERFAMILY SSF111369 72 176 1.27E-6 T 22-04-2016 NHAM_RS15005 c3e99c0b51a547f47c8c37f90397ba2c 410 Gene3D G3DSA:2.40.50.100 227 251 1.9E-10 T 22-04-2016 NHAM_RS15005 c3e99c0b51a547f47c8c37f90397ba2c 410 Gene3D G3DSA:2.40.50.100 74 107 1.9E-10 T 22-04-2016 NHAM_RS15005 c3e99c0b51a547f47c8c37f90397ba2c 410 PANTHER PTHR30367 1 410 5.9E-275 T 22-04-2016 NHAM_RS15005 c3e99c0b51a547f47c8c37f90397ba2c 410 PANTHER PTHR30367:SF4 1 410 5.9E-275 T 22-04-2016 NHAM_RS15005 c3e99c0b51a547f47c8c37f90397ba2c 410 Pfam PF13533 Biotin-lipoyl like 74 121 4.4E-5 T 22-04-2016 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 Gene3D G3DSA:3.40.192.10 7 140 1.3E-45 T 22-04-2016 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 287 36.793 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 SUPERFAMILY SSF53223 1 122 5.47E-38 T 22-04-2016 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 284 3.3E-61 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 SUPERFAMILY SSF51735 123 283 1.62E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 Gene3D G3DSA:3.40.50.720 141 268 1.3E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 7.4E-37 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 243 259 1.7E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.7E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 260 278 1.7E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.7E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.7E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.7E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.7E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 NHAM_RS03165 21bd3682d78713aa9da44a4335e33e5f 294 PANTHER PTHR10025 1 283 1.2E-146 T 22-04-2016 NHAM_RS11275 4338fecc96c82336be88a8e4c0b1a300 198 Gene3D G3DSA:3.40.30.10 94 171 6.8E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS11275 4338fecc96c82336be88a8e4c0b1a300 198 PIRSF PIRSF000216 1 198 4.2E-60 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 NHAM_RS11275 4338fecc96c82336be88a8e4c0b1a300 198 SUPERFAMILY SSF52833 18 192 7.6E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS11275 4338fecc96c82336be88a8e4c0b1a300 198 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 131 149 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 NHAM_RS11275 4338fecc96c82336be88a8e4c0b1a300 198 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 173 2.9E-50 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 NHAM_RS11275 4338fecc96c82336be88a8e4c0b1a300 198 PANTHER PTHR10371 16 198 3.6E-78 T 22-04-2016 NHAM_RS11275 4338fecc96c82336be88a8e4c0b1a300 198 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 27 172 1.0E-51 T 22-04-2016 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 Pfam PF07549 SecD/SecF GG Motif 40 62 2.2E-4 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 Pfam PF02355 Protein export membrane protein 353 522 3.1E-17 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 PANTHER PTHR30081 158 216 4.3E-156 T 22-04-2016 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 PANTHER PTHR30081 23 96 4.3E-156 T 22-04-2016 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 PANTHER PTHR30081 249 533 4.3E-156 T 22-04-2016 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 532 44.365 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 SUPERFAMILY SSF82866 329 527 1.83E-46 T 22-04-2016 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 Gene3D G3DSA:1.20.1640.10 328 529 2.3E-27 T 22-04-2016 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 46 519 4.5E-151 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 PRINTS PR00702 Acriflavin resistance protein family signature 496 519 2.7E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 PRINTS PR00702 Acriflavin resistance protein family signature 421 445 2.7E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 PRINTS PR00702 Acriflavin resistance protein family signature 368 391 2.7E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 282 512 1.1E-82 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 PANTHER PTHR30081:SF1 158 216 4.3E-156 T 22-04-2016 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 PANTHER PTHR30081:SF1 23 96 4.3E-156 T 22-04-2016 NHAM_RS09200 adae426cf865222933ed2aa8e9a7a399 533 PANTHER PTHR30081:SF1 249 533 4.3E-156 T 22-04-2016 NHAM_RS03830 e05e26db1fa4ae9da4807c1b775e574d 160 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 21 150 6.7E-44 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 NHAM_RS03830 e05e26db1fa4ae9da4807c1b775e574d 160 Pfam PF08334 Type II secretion system (T2SS), protein G 45 150 5.9E-39 T 22-04-2016 IPR013545 Type II secretion system protein G NHAM_RS03830 e05e26db1fa4ae9da4807c1b775e574d 160 PANTHER PTHR30093:SF9 6 151 1.0E-39 T 22-04-2016 NHAM_RS03830 e05e26db1fa4ae9da4807c1b775e574d 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 42 4.8E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site NHAM_RS03830 e05e26db1fa4ae9da4807c1b775e574d 160 PANTHER PTHR30093 6 151 1.0E-39 T 22-04-2016 NHAM_RS03830 e05e26db1fa4ae9da4807c1b775e574d 160 Gene3D G3DSA:3.30.700.10 23 89 2.8E-7 T 22-04-2016 NHAM_RS03830 e05e26db1fa4ae9da4807c1b775e574d 160 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 20 41 2.4E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site NHAM_RS03830 e05e26db1fa4ae9da4807c1b775e574d 160 SUPERFAMILY SSF54523 48 149 3.98E-32 T 22-04-2016 NHAM_RS03830 e05e26db1fa4ae9da4807c1b775e574d 160 PRINTS PR00813 Bacterial general secretion pathway protein G signature 58 76 7.2E-13 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 NHAM_RS03830 e05e26db1fa4ae9da4807c1b775e574d 160 PRINTS PR00813 Bacterial general secretion pathway protein G signature 22 47 7.2E-13 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 NHAM_RS03830 e05e26db1fa4ae9da4807c1b775e574d 160 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 21 41 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site NHAM_RS10535 73f8444eb575c0b7b97969c0aa4e54e6 401 Gene3D G3DSA:1.10.3720.10 189 396 5.5E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS10535 73f8444eb575c0b7b97969c0aa4e54e6 401 Gene3D G3DSA:1.10.3720.10 88 154 2.1E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS10535 73f8444eb575c0b7b97969c0aa4e54e6 401 SUPERFAMILY SSF161098 189 381 1.15E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS10535 73f8444eb575c0b7b97969c0aa4e54e6 401 SUPERFAMILY SSF161098 90 154 3.14E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS10535 73f8444eb575c0b7b97969c0aa4e54e6 401 PANTHER PTHR30085 1 179 1.6E-158 T 22-04-2016 NHAM_RS10535 73f8444eb575c0b7b97969c0aa4e54e6 401 PANTHER PTHR30085 258 399 1.6E-158 T 22-04-2016 NHAM_RS10535 73f8444eb575c0b7b97969c0aa4e54e6 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 388 6.3E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS10535 73f8444eb575c0b7b97969c0aa4e54e6 401 PANTHER PTHR30085:SF1 1 179 1.6E-158 T 22-04-2016 NHAM_RS10535 73f8444eb575c0b7b97969c0aa4e54e6 401 PANTHER PTHR30085:SF1 258 399 1.6E-158 T 22-04-2016 NHAM_RS10535 73f8444eb575c0b7b97969c0aa4e54e6 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 90 153 6.7E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NHAM_RS04920 4b20c837ed703e80a3358246fabb8eb8 862 PANTHER PTHR22576:SF30 1 380 2.1E-103 T 22-04-2016 NHAM_RS04920 4b20c837ed703e80a3358246fabb8eb8 862 SUPERFAMILY SSF52129 10 251 8.67E-40 T 22-04-2016 IPR029030 Caspase-like domain NHAM_RS04920 4b20c837ed703e80a3358246fabb8eb8 862 PANTHER PTHR22576 1 380 2.1E-103 T 22-04-2016 NHAM_RS04920 4b20c837ed703e80a3358246fabb8eb8 862 Gene3D G3DSA:3.40.50.1460 21 159 2.7E-9 T 22-04-2016 IPR029030 Caspase-like domain NHAM_RS04920 4b20c837ed703e80a3358246fabb8eb8 862 Pfam PF00656 Caspase domain 28 243 3.5E-23 T 22-04-2016 NHAM_RS16890 c1321ad115b67e4341bed4b846083aa2 418 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 226 406 1.0E-35 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS16890 c1321ad115b67e4341bed4b846083aa2 418 PANTHER PTHR30097:SF3 48 410 1.5E-91 T 22-04-2016 NHAM_RS16890 c1321ad115b67e4341bed4b846083aa2 418 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 79 336 2.6E-51 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS16890 c1321ad115b67e4341bed4b846083aa2 418 SUPERFAMILY SSF111369 223 341 5.23E-17 T 22-04-2016 NHAM_RS16890 c1321ad115b67e4341bed4b846083aa2 418 SUPERFAMILY SSF111369 98 195 5.23E-17 T 22-04-2016 NHAM_RS16890 c1321ad115b67e4341bed4b846083aa2 418 Gene3D G3DSA:2.40.50.100 226 252 1.0E-11 T 22-04-2016 NHAM_RS16890 c1321ad115b67e4341bed4b846083aa2 418 Gene3D G3DSA:2.40.50.100 98 128 1.0E-11 T 22-04-2016 NHAM_RS16890 c1321ad115b67e4341bed4b846083aa2 418 PANTHER PTHR30097 48 410 1.5E-91 T 22-04-2016 NHAM_RS13715 0a301c7b4771b6fab72b69257db34915 463 Gene3D G3DSA:3.90.1150.10 310 439 1.1E-30 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS13715 0a301c7b4771b6fab72b69257db34915 463 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS13715 0a301c7b4771b6fab72b69257db34915 463 Pfam PF00202 Aminotransferase class-III 45 436 1.1E-92 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS13715 0a301c7b4771b6fab72b69257db34915 463 PANTHER PTHR11986:SF15 1 445 1.7E-263 T 22-04-2016 NHAM_RS13715 0a301c7b4771b6fab72b69257db34915 463 PANTHER PTHR11986 1 445 1.7E-263 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS13715 0a301c7b4771b6fab72b69257db34915 463 Gene3D G3DSA:3.40.640.10 76 309 2.4E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS13715 0a301c7b4771b6fab72b69257db34915 463 SUPERFAMILY SSF53383 40 437 2.21E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS06350 08c872151fbd05137d0c53b6030053d0 647 Pfam PF13502 AsmA-like C-terminal region 379 584 1.6E-21 T 22-04-2016 IPR032712 AsmA-like, C-terminal NHAM_RS06350 08c872151fbd05137d0c53b6030053d0 647 Pfam PF05170 AsmA family 5 206 3.3E-18 T 22-04-2016 IPR007844 AsmA NHAM_RS06350 08c872151fbd05137d0c53b6030053d0 647 PANTHER PTHR30441:SF2 1 646 4.6E-90 T 22-04-2016 NHAM_RS06350 08c872151fbd05137d0c53b6030053d0 647 PANTHER PTHR30441 1 646 4.6E-90 T 22-04-2016 NHAM_RS13200 a73500ad435235b8944d635a3552e808 250 PANTHER PTHR10992 8 248 2.0E-45 T 22-04-2016 NHAM_RS13200 a73500ad435235b8944d635a3552e808 250 Pfam PF00561 alpha/beta hydrolase fold 21 182 4.9E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS13200 a73500ad435235b8944d635a3552e808 250 PANTHER PTHR10992:SF771 8 248 2.0E-45 T 22-04-2016 NHAM_RS13200 a73500ad435235b8944d635a3552e808 250 SUPERFAMILY SSF53474 3 230 8.71E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS13200 a73500ad435235b8944d635a3552e808 250 Gene3D G3DSA:3.40.50.1820 3 230 7.2E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS04030 84b7bedf7dfb5cba38eff03d069a6bba 83 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 13 68 3.3E-24 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 NHAM_RS04030 84b7bedf7dfb5cba38eff03d069a6bba 83 PANTHER PTHR34137 1 81 1.8E-23 T 22-04-2016 NHAM_RS04030 84b7bedf7dfb5cba38eff03d069a6bba 83 PIRSF PIRSF006488 1 83 1.1E-23 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 NHAM_RS04030 84b7bedf7dfb5cba38eff03d069a6bba 83 Pfam PF02609 Exonuclease VII small subunit 14 65 5.8E-20 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 NHAM_RS04030 84b7bedf7dfb5cba38eff03d069a6bba 83 Gene3D G3DSA:1.10.287.1040 8 74 4.3E-27 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 NHAM_RS04030 84b7bedf7dfb5cba38eff03d069a6bba 83 SUPERFAMILY SSF116842 7 73 1.44E-21 T 22-04-2016 NHAM_RS04030 84b7bedf7dfb5cba38eff03d069a6bba 83 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 13 73 16.501 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 NHAM_RS04030 84b7bedf7dfb5cba38eff03d069a6bba 83 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 10 54 4.0E-18 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 NHAM_RS09755 9d5d1a5d16342953eab61eed28bcab1e 242 PIRSF PIRSF036990 1 234 1.2E-91 T 22-04-2016 IPR017080 Uncharacterised conserved protein UCP036990, CBS, BON NHAM_RS09755 9d5d1a5d16342953eab61eed28bcab1e 242 Pfam PF04972 BON domain 156 221 1.5E-12 T 22-04-2016 IPR007055 BON domain NHAM_RS09755 9d5d1a5d16342953eab61eed28bcab1e 242 PANTHER PTHR11911:SF90 1 169 7.4E-55 T 22-04-2016 NHAM_RS09755 9d5d1a5d16342953eab61eed28bcab1e 242 SMART SM00116 10 58 1.5E-12 T 22-04-2016 IPR000644 CBS domain NHAM_RS09755 9d5d1a5d16342953eab61eed28bcab1e 242 SMART SM00116 97 144 5.0E-9 T 22-04-2016 IPR000644 CBS domain NHAM_RS09755 9d5d1a5d16342953eab61eed28bcab1e 242 PANTHER PTHR11911 1 169 7.4E-55 T 22-04-2016 NHAM_RS09755 9d5d1a5d16342953eab61eed28bcab1e 242 Gene3D G3DSA:3.10.580.10 1 144 3.8E-35 T 22-04-2016 NHAM_RS09755 9d5d1a5d16342953eab61eed28bcab1e 242 SUPERFAMILY SSF54631 1 153 4.8E-37 T 22-04-2016 NHAM_RS09755 9d5d1a5d16342953eab61eed28bcab1e 242 Pfam PF00571 CBS domain 90 144 9.6E-12 T 22-04-2016 IPR000644 CBS domain NHAM_RS09755 9d5d1a5d16342953eab61eed28bcab1e 242 Pfam PF00571 CBS domain 4 56 7.9E-15 T 22-04-2016 IPR000644 CBS domain NHAM_RS06550 1409af7375e6c0be7085b154abbd85af 346 PANTHER PTHR35851:SF1 52 340 1.6E-57 T 22-04-2016 NHAM_RS06550 1409af7375e6c0be7085b154abbd85af 346 Pfam PF08478 POTRA domain, FtsQ-type 130 198 6.6E-18 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type NHAM_RS06550 1409af7375e6c0be7085b154abbd85af 346 Pfam PF03799 Cell division protein FtsQ 202 315 1.1E-15 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB NHAM_RS06550 1409af7375e6c0be7085b154abbd85af 346 PANTHER PTHR35851 52 340 1.6E-57 T 22-04-2016 NHAM_RS06550 1409af7375e6c0be7085b154abbd85af 346 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 100 333 23.645 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 NHAM_RS02190 f57dc33fe2546650db43310d5fd6fbe1 416 PANTHER PTHR23539 6 415 2.2E-97 T 22-04-2016 NHAM_RS02190 f57dc33fe2546650db43310d5fd6fbe1 416 Gene3D G3DSA:1.20.1250.20 224 407 3.7E-24 T 22-04-2016 NHAM_RS02190 f57dc33fe2546650db43310d5fd6fbe1 416 Gene3D G3DSA:1.20.1250.20 27 195 1.1E-13 T 22-04-2016 NHAM_RS02190 f57dc33fe2546650db43310d5fd6fbe1 416 Pfam PF07690 Major Facilitator Superfamily 26 303 6.3E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS02190 f57dc33fe2546650db43310d5fd6fbe1 416 SUPERFAMILY SSF103473 27 407 7.46E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS02190 f57dc33fe2546650db43310d5fd6fbe1 416 PANTHER PTHR23539:SF1 6 415 2.2E-97 T 22-04-2016 NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 PANTHER PTHR23151:SF47 1 413 2.3E-231 T 22-04-2016 NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 183 410 3.7E-81 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 SUPERFAMILY SSF47005 110 154 4.19E-10 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 SUPERFAMILY SSF52777 183 412 1.51E-88 T 22-04-2016 NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 Gene3D G3DSA:4.10.320.10 115 161 5.7E-16 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 Pfam PF00364 Biotin-requiring enzyme 3 75 1.4E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 Pfam PF02817 e3 binding domain 116 150 7.3E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 412 3.4E-175 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 Gene3D G3DSA:2.40.50.100 1 95 3.7E-30 T 22-04-2016 NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 PANTHER PTHR23151 1 413 2.3E-231 T 22-04-2016 NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 SUPERFAMILY SSF51230 2 95 5.63E-28 T 22-04-2016 IPR011053 Single hybrid motif NHAM_RS02810 924020ee7d89c7dc8da14cf6d9df4de5 413 Gene3D G3DSA:3.30.559.10 174 411 1.9E-91 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 Gene3D G3DSA:3.30.70.1430 568 669 2.6E-27 T 22-04-2016 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 SUPERFAMILY SSF82714 183 271 5.75E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 PANTHER PTHR32063:SF10 1 1052 0.0 T 22-04-2016 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 SUPERFAMILY SSF82693 136 182 2.44E-22 T 22-04-2016 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 SUPERFAMILY SSF82693 38 131 4.97E-21 T 22-04-2016 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 Gene3D G3DSA:1.10.3850.10 279 498 2.3E-57 T 22-04-2016 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 Gene3D G3DSA:1.10.3850.10 815 1026 4.2E-53 T 22-04-2016 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 Gene3D G3DSA:3.30.2090.10 182 272 5.0E-25 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1032 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 Gene3D G3DSA:3.30.2090.10 721 806 2.5E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.8E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.8E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.8E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.8E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.8E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.8E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 1.8E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.8E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.8E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 Gene3D G3DSA:3.30.70.1430 38 139 3.6E-26 T 22-04-2016 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 SUPERFAMILY SSF82866 296 497 3.53E-47 T 22-04-2016 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 PANTHER PTHR32063 1 1052 0.0 T 22-04-2016 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 SUPERFAMILY SSF82714 721 806 2.62E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 SUPERFAMILY SSF82866 804 1026 3.79E-41 T 22-04-2016 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 Pfam PF00873 AcrB/AcrD/AcrF family 1 1024 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 SUPERFAMILY SSF82693 566 669 5.07E-24 T 22-04-2016 NHAM_RS18155 6fe686954e8662db8dbf32e84841ad96 1056 SUPERFAMILY SSF82693 274 330 2.44E-22 T 22-04-2016 NHAM_RS08930 ff178c8488d51e02fdfc02e8870a0fa2 185 Gene3D G3DSA:3.40.50.360 7 180 1.4E-48 T 22-04-2016 IPR029039 Flavoprotein-like domain NHAM_RS08930 ff178c8488d51e02fdfc02e8870a0fa2 185 PANTHER PTHR30543:SF6 1 180 1.9E-53 T 22-04-2016 NHAM_RS08930 ff178c8488d51e02fdfc02e8870a0fa2 185 SUPERFAMILY SSF52218 8 176 6.11E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain NHAM_RS08930 ff178c8488d51e02fdfc02e8870a0fa2 185 Pfam PF03358 NADPH-dependent FMN reductase 8 148 4.4E-34 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 NHAM_RS08930 ff178c8488d51e02fdfc02e8870a0fa2 185 PANTHER PTHR30543 1 180 1.9E-53 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 Pfam PF00702 haloacid dehalogenase-like hydrolase 516 733 3.4E-42 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 Gene3D G3DSA:2.70.150.10 244 418 6.7E-28 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PANTHER PTHR24093 171 832 4.0E-233 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 SUPERFAMILY SSF56784 577 826 3.43E-57 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 SUPERFAMILY SSF56784 518 538 3.43E-57 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 SUPERFAMILY SSF81665 419 514 3.27E-12 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 SUPERFAMILY SSF81665 768 790 3.27E-12 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 SUPERFAMILY SSF81665 287 321 3.27E-12 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 SUPERFAMILY SSF81653 327 418 1.11E-25 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 Gene3D G3DSA:3.40.50.1000 647 787 2.1E-54 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 Gene3D G3DSA:3.40.50.1000 491 534 2.1E-54 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 289 797 3.1E-89 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 225 829 9.5E-181 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 Pfam PF00122 E1-E2 ATPase 288 511 6.8E-65 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 Gene3D G3DSA:3.40.1110.10 535 646 5.7E-24 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PANTHER PTHR24093:SF50 171 832 4.0E-233 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 SUPERFAMILY SSF47240 69 117 7.84E-10 T 22-04-2016 IPR009078 Ferritin-like superfamily NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00943 Copper-transporting ATPase signature 696 713 1.4E-14 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00943 Copper-transporting ATPase signature 503 518 1.4E-14 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00943 Copper-transporting ATPase signature 792 806 1.4E-14 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00943 Copper-transporting ATPase signature 229 248 1.4E-14 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00943 Copper-transporting ATPase signature 287 306 1.4E-14 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00943 Copper-transporting ATPase signature 307 325 1.4E-14 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00943 Copper-transporting ATPase signature 441 455 1.4E-14 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 Pfam PF04945 YHS domain 69 112 6.3E-17 T 22-04-2016 IPR007029 YHS domain NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 244 828 1.5E-190 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 522 528 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 SMART SM00746 70 108 4.0E-9 T 22-04-2016 IPR011017 TRASH domain NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 719 738 2.5E-29 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 534 2.5E-29 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 742 754 2.5E-29 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 368 382 2.5E-29 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 666 676 2.5E-29 T 22-04-2016 NHAM_RS17620 2478b7ac9e69efdbea018dd9db83cb36 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 655 2.5E-29 T 22-04-2016 NHAM_RS07400 b3032431a54144e06db315909e9a891c 987 Gene3D G3DSA:3.30.460.10 667 832 6.5E-48 T 22-04-2016 NHAM_RS07400 b3032431a54144e06db315909e9a891c 987 Gene3D G3DSA:3.30.460.10 141 314 1.8E-50 T 22-04-2016 NHAM_RS07400 b3032431a54144e06db315909e9a891c 987 SUPERFAMILY SSF81301 553 835 1.31E-72 T 22-04-2016 NHAM_RS07400 b3032431a54144e06db315909e9a891c 987 SUPERFAMILY SSF81593 840 983 2.04E-31 T 22-04-2016 NHAM_RS07400 b3032431a54144e06db315909e9a891c 987 Pfam PF08335 GlnD PII-uridylyltransferase 328 468 1.3E-39 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 NHAM_RS07400 b3032431a54144e06db315909e9a891c 987 Pfam PF08335 GlnD PII-uridylyltransferase 861 981 3.8E-9 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 NHAM_RS07400 b3032431a54144e06db315909e9a891c 987 PANTHER PTHR30621 8 987 4.3E-295 T 22-04-2016 NHAM_RS07400 b3032431a54144e06db315909e9a891c 987 SUPERFAMILY SSF81593 316 468 1.57E-43 T 22-04-2016 NHAM_RS07400 b3032431a54144e06db315909e9a891c 987 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 58 970 17.649 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 NHAM_RS07400 b3032431a54144e06db315909e9a891c 987 SUPERFAMILY SSF81301 51 315 1.9E-68 T 22-04-2016 NHAM_RS07400 b3032431a54144e06db315909e9a891c 987 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 63 303 2.4E-65 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 NHAM_RS07400 b3032431a54144e06db315909e9a891c 987 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 582 825 6.1E-69 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 PANTHER PTHR22773 65 629 8.9E-256 T 22-04-2016 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 70 89 7.6E-9 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 465 487 7.6E-9 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 311 333 7.6E-9 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 PANTHER PTHR22773:SF50 65 629 8.9E-256 T 22-04-2016 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 67 677 1.1E-248 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 Pfam PF00361 Proton-conducting membrane transporter 172 462 3.6E-93 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 361 373 5.7E-66 T 22-04-2016 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 466 485 5.7E-66 T 22-04-2016 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 149 169 5.7E-66 T 22-04-2016 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 271 292 5.7E-66 T 22-04-2016 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 196 217 5.7E-66 T 22-04-2016 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 121 146 5.7E-66 T 22-04-2016 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 293 319 5.7E-66 T 22-04-2016 NHAM_RS11240 adf09f24e5ca6f00d10e9db8cfd5b2e0 683 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 104 160 5.2E-24 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal NHAM_RS09565 266c7c02ade6bb6eea8ff7219d8ac214 193 PANTHER PTHR11404 27 187 1.7E-33 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS09565 266c7c02ade6bb6eea8ff7219d8ac214 193 PANTHER PTHR11404:SF6 27 187 1.7E-33 T 22-04-2016 NHAM_RS09565 266c7c02ade6bb6eea8ff7219d8ac214 193 SUPERFAMILY SSF54719 74 185 1.7E-30 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS09565 266c7c02ade6bb6eea8ff7219d8ac214 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 79 180 3.8E-22 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS13010 d15ad85aaaa2358da4368751332f7fd0 139 Gene3D G3DSA:1.20.120.550 5 133 2.3E-12 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain NHAM_RS13010 d15ad85aaaa2358da4368751332f7fd0 139 Pfam PF01124 MAPEG family 7 132 5.7E-17 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein NHAM_RS13010 d15ad85aaaa2358da4368751332f7fd0 139 SUPERFAMILY SSF161084 5 131 9.42E-22 T 22-04-2016 NHAM_RS18095 37d3936bb6b3d150e5c0ebb5d7bdfe1f 177 Pfam PF04343 Protein of unknown function, DUF488 15 139 2.9E-33 T 22-04-2016 IPR007438 Protein of unknown function DUF488 NHAM_RS18095 37d3936bb6b3d150e5c0ebb5d7bdfe1f 177 PIRSF PIRSF024492 1 177 1.6E-62 T 22-04-2016 IPR014519 Uncharacterised conserved protein UCP024492 NHAM_RS18095 37d3936bb6b3d150e5c0ebb5d7bdfe1f 177 PANTHER PTHR39337:SF1 6 175 5.4E-49 T 22-04-2016 NHAM_RS18095 37d3936bb6b3d150e5c0ebb5d7bdfe1f 177 PANTHER PTHR39337 6 175 5.4E-49 T 22-04-2016 NHAM_RS12810 5dae8453a3752743f1d2e367aa6f9f36 283 SUPERFAMILY SSF55315 47 120 5.65E-12 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like NHAM_RS12810 5dae8453a3752743f1d2e367aa6f9f36 283 PANTHER PTHR12029:SF58 3 273 8.4E-57 T 22-04-2016 NHAM_RS12810 5dae8453a3752743f1d2e367aa6f9f36 283 PANTHER PTHR12029 3 273 8.4E-57 T 22-04-2016 NHAM_RS12810 5dae8453a3752743f1d2e367aa6f9f36 283 Gene3D G3DSA:3.40.1280.10 130 273 1.3E-42 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NHAM_RS12810 5dae8453a3752743f1d2e367aa6f9f36 283 SUPERFAMILY SSF75217 111 273 1.18E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases NHAM_RS12810 5dae8453a3752743f1d2e367aa6f9f36 283 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 50 121 8.0E-11 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 NHAM_RS12810 5dae8453a3752743f1d2e367aa6f9f36 283 SMART SM00967 50 123 2.5E-14 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 NHAM_RS12810 5dae8453a3752743f1d2e367aa6f9f36 283 Pfam PF00588 SpoU rRNA Methylase family 133 273 2.0E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 NHAM_RS12810 5dae8453a3752743f1d2e367aa6f9f36 283 Gene3D G3DSA:3.30.1330.30 46 119 1.6E-10 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like NHAM_RS12810 5dae8453a3752743f1d2e367aa6f9f36 283 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 50 273 8.6E-49 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 NHAM_RS04765 ea0760bc223791ec67939a84b6f72dc2 433 Gene3D G3DSA:3.90.850.10 128 415 2.6E-113 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NHAM_RS04765 ea0760bc223791ec67939a84b6f72dc2 433 SUPERFAMILY SSF56529 128 421 1.83E-101 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NHAM_RS04765 ea0760bc223791ec67939a84b6f72dc2 433 SUPERFAMILY SSF63433 10 125 1.83E-35 T 22-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 NHAM_RS04765 ea0760bc223791ec67939a84b6f72dc2 433 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 11 421 4.4E-171 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 NHAM_RS04765 ea0760bc223791ec67939a84b6f72dc2 433 PANTHER PTHR11820 5 94 4.8E-181 T 22-04-2016 NHAM_RS04765 ea0760bc223791ec67939a84b6f72dc2 433 PANTHER PTHR11820 125 423 4.8E-181 T 22-04-2016 NHAM_RS04765 ea0760bc223791ec67939a84b6f72dc2 433 Gene3D G3DSA:2.30.30.230 11 127 6.0E-35 T 22-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 NHAM_RS04765 ea0760bc223791ec67939a84b6f72dc2 433 PANTHER PTHR11820:SF1 5 94 4.8E-181 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 NHAM_RS04765 ea0760bc223791ec67939a84b6f72dc2 433 PANTHER PTHR11820:SF1 125 423 4.8E-181 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 NHAM_RS04765 ea0760bc223791ec67939a84b6f72dc2 433 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 131 419 6.7E-60 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NHAM_RS04765 ea0760bc223791ec67939a84b6f72dc2 433 Pfam PF09298 Fumarylacetoacetase N-terminal 23 125 2.0E-28 T 22-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 NHAM_RS02880 f9cd5b23e082a6474ba30c517cd7945e 364 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 13 353 5.2E-114 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS02880 f9cd5b23e082a6474ba30c517cd7945e 364 Gene3D G3DSA:3.20.20.70 6 353 1.4E-127 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS02880 f9cd5b23e082a6474ba30c517cd7945e 364 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 290 310 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 NHAM_RS02880 f9cd5b23e082a6474ba30c517cd7945e 364 PANTHER PTHR11938:SF47 1 363 2.0E-230 T 22-04-2016 NHAM_RS02880 f9cd5b23e082a6474ba30c517cd7945e 364 Pfam PF01180 Dihydroorotate dehydrogenase 44 338 1.0E-87 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 NHAM_RS02880 f9cd5b23e082a6474ba30c517cd7945e 364 SUPERFAMILY SSF51395 11 353 2.51E-97 T 22-04-2016 NHAM_RS02880 f9cd5b23e082a6474ba30c517cd7945e 364 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 NHAM_RS02880 f9cd5b23e082a6474ba30c517cd7945e 364 PANTHER PTHR11938 1 363 2.0E-230 T 22-04-2016 NHAM_RS19795 8ac7e23bb93cfe579ccf312aaadaa066 214 PANTHER PTHR13696:SF54 1 211 9.0E-59 T 22-04-2016 NHAM_RS19795 8ac7e23bb93cfe579ccf312aaadaa066 214 PIRSF PIRSF009320 1 214 4.5E-56 T 22-04-2016 NHAM_RS19795 8ac7e23bb93cfe579ccf312aaadaa066 214 SUPERFAMILY SSF52540 1 207 9.84E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19795 8ac7e23bb93cfe579ccf312aaadaa066 214 Gene3D G3DSA:3.40.50.300 1 207 8.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19795 8ac7e23bb93cfe579ccf312aaadaa066 214 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 142 1.2E-30 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NHAM_RS19795 8ac7e23bb93cfe579ccf312aaadaa066 214 PANTHER PTHR13696 1 211 9.0E-59 T 22-04-2016 NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 161 1100 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 Pfam PF03461 TRCF domain 1029 1121 3.8E-26 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 Pfam PF00270 DEAD/DEAH box helicase 632 786 1.5E-15 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 SUPERFAMILY SSF52540 803 1009 4.75E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 SUPERFAMILY SSF52540 12 364 8.5E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 SMART SM00487 621 811 4.5E-32 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 Pfam PF02559 CarD-like/TRCF domain 502 595 2.5E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 SUPERFAMILY SSF52540 370 491 2.92E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 SUPERFAMILY SSF52540 546 805 4.41E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 PANTHER PTHR14025 409 1161 0.0 T 22-04-2016 NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 Gene3D G3DSA:3.30.2060.10 144 219 9.5E-15 T 22-04-2016 NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 SMART SM01058 501 597 9.4E-45 T 22-04-2016 IPR003711 CarD-like/TRCF domain NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 Gene3D G3DSA:3.40.50.300 810 984 3.6E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 Gene3D G3DSA:3.40.50.300 608 807 4.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 PANTHER PTHR14025:SF21 409 1161 0.0 T 22-04-2016 NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 47 1167 28.436 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 SUPERFAMILY SSF143517 1018 1167 2.62E-42 T 22-04-2016 NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 SMART SM00982 1027 1127 2.1E-43 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 SUPERFAMILY SSF141259 494 569 7.45E-21 T 22-04-2016 IPR003711 CarD-like/TRCF domain NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 SMART SM00490 847 931 4.6E-18 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS10455 ff0c1a9930c4959beaf6e2bf31bcea54 1174 Pfam PF00271 Helicase conserved C-terminal domain 825 930 1.8E-17 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS17975 4f30400d67adc7c1208cb3fb5b383d96 328 Pfam PF00107 Zinc-binding dehydrogenase 161 269 1.6E-11 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NHAM_RS17975 4f30400d67adc7c1208cb3fb5b383d96 328 SUPERFAMILY SSF51735 118 290 2.76E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS17975 4f30400d67adc7c1208cb3fb5b383d96 328 Gene3D G3DSA:3.40.50.720 128 295 3.4E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS17975 4f30400d67adc7c1208cb3fb5b383d96 328 PANTHER PTHR11695:SF13 18 327 1.8E-157 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI NHAM_RS17975 4f30400d67adc7c1208cb3fb5b383d96 328 Gene3D G3DSA:3.90.180.10 3 89 2.1E-8 T 22-04-2016 IPR011032 GroES-like NHAM_RS17975 4f30400d67adc7c1208cb3fb5b383d96 328 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 327 5.1E-135 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI NHAM_RS17975 4f30400d67adc7c1208cb3fb5b383d96 328 SUPERFAMILY SSF50129 4 148 8.81E-44 T 22-04-2016 IPR011032 GroES-like NHAM_RS17975 4f30400d67adc7c1208cb3fb5b383d96 328 SMART SM00829 15 325 7.0E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NHAM_RS17975 4f30400d67adc7c1208cb3fb5b383d96 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 91 6.9E-7 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NHAM_RS17975 4f30400d67adc7c1208cb3fb5b383d96 328 PANTHER PTHR11695 18 327 1.8E-157 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 Gene3D G3DSA:1.10.10.470 620 723 1.8E-28 T 22-04-2016 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 6 910 1.6E-301 T 22-04-2016 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 SUPERFAMILY SSF51445 248 492 3.66E-132 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 SUPERFAMILY SSF51445 5 179 3.66E-132 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 SUPERFAMILY SSF51445 529 818 3.66E-132 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 PANTHER PTHR10357 722 919 1.7E-155 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 Pfam PF00128 Alpha amylase, catalytic domain 28 100 5.2E-16 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 Gene3D G3DSA:3.20.20.80 579 619 1.7E-73 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 Gene3D G3DSA:3.20.20.80 6 98 1.7E-73 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 Gene3D G3DSA:3.20.20.80 310 390 1.7E-73 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 Gene3D G3DSA:3.20.20.80 730 854 1.7E-73 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 PANTHER PTHR10357:SF166 262 423 1.7E-155 T 22-04-2016 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 PANTHER PTHR10357:SF166 722 919 1.7E-155 T 22-04-2016 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 PANTHER PTHR10357:SF166 19 127 1.7E-155 T 22-04-2016 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 Gene3D G3DSA:1.10.150.200 513 545 1.8E-10 T 22-04-2016 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 Gene3D G3DSA:1.10.150.200 412 476 1.8E-10 T 22-04-2016 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 PANTHER PTHR10357 262 423 1.7E-155 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 PANTHER PTHR10357 19 127 1.7E-155 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 Gene3D G3DSA:3.30.1590.10 256 294 2.2E-42 T 22-04-2016 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 Gene3D G3DSA:3.30.1590.10 99 182 2.2E-42 T 22-04-2016 NHAM_RS07465 c310cf7d5371ef519052978e4d22abbb 920 SMART SM00642 3 494 2.1E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NHAM_RS10260 054381610a962d4322290f7aeed8ae1c 411 Pfam PF13356 Domain of unknown function (DUF4102) 2 84 7.6E-17 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 NHAM_RS10260 054381610a962d4322290f7aeed8ae1c 411 Pfam PF00589 Phage integrase family 211 375 6.6E-7 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS10260 054381610a962d4322290f7aeed8ae1c 411 PANTHER PTHR30629:SF3 2 395 7.9E-93 T 22-04-2016 NHAM_RS10260 054381610a962d4322290f7aeed8ae1c 411 SUPERFAMILY SSF56349 97 387 4.71E-42 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS10260 054381610a962d4322290f7aeed8ae1c 411 Gene3D G3DSA:1.10.443.10 219 385 8.8E-13 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS10260 054381610a962d4322290f7aeed8ae1c 411 Gene3D G3DSA:1.10.150.130 97 193 1.2E-16 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS10260 054381610a962d4322290f7aeed8ae1c 411 PANTHER PTHR30629 2 395 7.9E-93 T 22-04-2016 NHAM_RS07540 4965262edaee5297ed9d1c69aff453f4 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.2E-27 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component NHAM_RS07540 4965262edaee5297ed9d1c69aff453f4 179 PANTHER PTHR35011 1 179 4.7E-103 T 22-04-2016 NHAM_RS07540 4965262edaee5297ed9d1c69aff453f4 179 PANTHER PTHR35011:SF4 1 179 4.7E-103 T 22-04-2016 NHAM_RS05380 9e8ef22aaf40b94b9266235957daf3a4 416 Gene3D G3DSA:1.25.40.10 51 144 1.1E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS05380 9e8ef22aaf40b94b9266235957daf3a4 416 SUPERFAMILY SSF53448 157 297 3.88E-15 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS05380 9e8ef22aaf40b94b9266235957daf3a4 416 Pfam PF01697 Glycosyltransferase family 92 167 317 8.7E-21 T 22-04-2016 IPR008166 Glycosyltransferase family 92 NHAM_RS05380 9e8ef22aaf40b94b9266235957daf3a4 416 PANTHER PTHR21461 165 317 7.3E-26 T 22-04-2016 NHAM_RS05380 9e8ef22aaf40b94b9266235957daf3a4 416 SUPERFAMILY SSF48452 49 141 2.05E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS05380 9e8ef22aaf40b94b9266235957daf3a4 416 Gene3D G3DSA:3.90.550.10 186 285 1.8E-6 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS20710 f510360da23b577a3aa965a27f768f98 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 8.8E-18 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS20710 f510360da23b577a3aa965a27f768f98 88 Pfam PF01649 Ribosomal protein S20 2 83 1.6E-19 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS20710 f510360da23b577a3aa965a27f768f98 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 14.214 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS20710 f510360da23b577a3aa965a27f768f98 88 Gene3D G3DSA:1.20.58.110 1 86 3.8E-21 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS20710 f510360da23b577a3aa965a27f768f98 88 SUPERFAMILY SSF46992 3 86 2.22E-20 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS20710 f510360da23b577a3aa965a27f768f98 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 86 5.0E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS20710 f510360da23b577a3aa965a27f768f98 88 PANTHER PTHR33398 1 87 2.0E-20 T 22-04-2016 NHAM_RS04180 3be95e65be6ffa402e5cf49a5ea5c49b 112 PANTHER PTHR30007:SF22 1 110 3.6E-20 T 22-04-2016 NHAM_RS04180 3be95e65be6ffa402e5cf49a5ea5c49b 112 PANTHER PTHR30007 1 110 3.6E-20 T 22-04-2016 NHAM_RS04180 3be95e65be6ffa402e5cf49a5ea5c49b 112 Pfam PF13586 Transposase DDE domain 28 109 1.5E-17 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS10855 3be95e65be6ffa402e5cf49a5ea5c49b 112 PANTHER PTHR30007:SF22 1 110 3.6E-20 T 22-04-2016 NHAM_RS10855 3be95e65be6ffa402e5cf49a5ea5c49b 112 PANTHER PTHR30007 1 110 3.6E-20 T 22-04-2016 NHAM_RS10855 3be95e65be6ffa402e5cf49a5ea5c49b 112 Pfam PF13586 Transposase DDE domain 28 109 1.5E-17 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS08165 3be95e65be6ffa402e5cf49a5ea5c49b 112 PANTHER PTHR30007:SF22 1 110 3.6E-20 T 22-04-2016 NHAM_RS08165 3be95e65be6ffa402e5cf49a5ea5c49b 112 PANTHER PTHR30007 1 110 3.6E-20 T 22-04-2016 NHAM_RS08165 3be95e65be6ffa402e5cf49a5ea5c49b 112 Pfam PF13586 Transposase DDE domain 28 109 1.5E-17 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS16715 3be95e65be6ffa402e5cf49a5ea5c49b 112 PANTHER PTHR30007:SF22 1 110 3.6E-20 T 22-04-2016 NHAM_RS16715 3be95e65be6ffa402e5cf49a5ea5c49b 112 PANTHER PTHR30007 1 110 3.6E-20 T 22-04-2016 NHAM_RS16715 3be95e65be6ffa402e5cf49a5ea5c49b 112 Pfam PF13586 Transposase DDE domain 28 109 1.5E-17 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 Gene3D G3DSA:3.30.450.20 199 353 2.1E-21 T 22-04-2016 NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 198 336 3.5E-10 T 22-04-2016 IPR000014 PAS domain NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 Gene3D G3DSA:1.10.287.130 354 404 1.9E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 515 5.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 554 5.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 529 5.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 573 5.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 SUPERFAMILY SSF55785 211 336 5.39E-13 T 22-04-2016 IPR000014 PAS domain NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 575 8.5E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 Gene3D G3DSA:3.30.565.10 405 574 1.9E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 Pfam PF00512 His Kinase A (phospho-acceptor) domain 349 418 8.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 SMART SM00388 349 418 9.6E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 SUPERFAMILY SSF55874 407 578 4.19E-49 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 SMART SM00091 200 266 6.6E-6 T 22-04-2016 IPR000014 PAS domain NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 SUPERFAMILY SSF47384 334 419 1.08E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 SMART SM00387 464 576 2.2E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 PANTHER PTHR24423 198 574 6.2E-113 T 22-04-2016 NHAM_RS13420 59544818503dd7fe0a54c0cf9b816274 614 PANTHER PTHR24423 9 19 6.2E-113 T 22-04-2016 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 Gene3D G3DSA:3.40.50.1820 430 670 6.4E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS14890 964ec79c29306822a0b209185f571186 697 PANTHER PTHR11757:SF3 8 697 3.5E-295 T 22-04-2016 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 Pfam PF00326 Prolyl oligopeptidase family 476 691 1.2E-61 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 621 643 1.6E-40 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 603 618 1.6E-40 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 486 510 1.6E-40 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 460 478 1.6E-40 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 544 564 1.6E-40 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 533 1.6E-40 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 SUPERFAMILY SSF50993 3 424 1.88E-95 T 22-04-2016 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 8 416 3.9E-87 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 PANTHER PTHR11757 8 697 3.5E-295 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 Gene3D G3DSA:2.130.10.120 86 420 5.5E-98 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 NHAM_RS14890 964ec79c29306822a0b209185f571186 697 SUPERFAMILY SSF53474 429 679 5.72E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS12005 a8c05ca5f5934a766028098a7ddfe046 79 PRINTS PR00974 Ribosomal protein S18 family signature 44 51 4.9E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12005 a8c05ca5f5934a766028098a7ddfe046 79 PRINTS PR00974 Ribosomal protein S18 family signature 66 76 4.9E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12005 a8c05ca5f5934a766028098a7ddfe046 79 PRINTS PR00974 Ribosomal protein S18 family signature 34 44 4.9E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12005 a8c05ca5f5934a766028098a7ddfe046 79 PRINTS PR00974 Ribosomal protein S18 family signature 52 66 4.9E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12005 a8c05ca5f5934a766028098a7ddfe046 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 27 50 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12005 a8c05ca5f5934a766028098a7ddfe046 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 10 77 2.1E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12005 a8c05ca5f5934a766028098a7ddfe046 79 Pfam PF01084 Ribosomal protein S18 25 74 7.7E-24 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12005 a8c05ca5f5934a766028098a7ddfe046 79 Gene3D G3DSA:4.10.640.10 14 78 4.2E-30 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12005 a8c05ca5f5934a766028098a7ddfe046 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 27 77 7.0E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12005 a8c05ca5f5934a766028098a7ddfe046 79 PANTHER PTHR13479 11 79 1.5E-27 T 22-04-2016 NHAM_RS12005 a8c05ca5f5934a766028098a7ddfe046 79 SUPERFAMILY SSF46911 6 78 5.62E-27 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12005 a8c05ca5f5934a766028098a7ddfe046 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 8 79 21.207 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12660 bac143161bc40be208fb469787632eea 137 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 10 129 6.3E-9 T 22-04-2016 IPR010064 Bacteriophage HK97-gp10, putative tail-component NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 PANTHER PTHR13697:SF2 3 89 3.3E-83 T 22-04-2016 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 Gene3D G3DSA:3.40.50.450 3 243 2.6E-52 T 22-04-2016 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 PANTHER PTHR13697:SF2 116 378 3.3E-83 T 22-04-2016 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 PANTHER PTHR13697 116 378 3.3E-83 T 22-04-2016 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 PANTHER PTHR13697 3 89 3.3E-83 T 22-04-2016 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 SUPERFAMILY SSF53784 3 87 1.07E-81 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 SUPERFAMILY SSF53784 114 371 1.07E-81 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 33 46 1.2E-29 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 175 1.2E-29 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 194 1.2E-29 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 250 262 1.2E-29 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 1.2E-29 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 299 321 1.2E-29 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 196 212 1.2E-29 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS04695 76b1962b3ceeb71064140b976b73416b 395 Pfam PF00365 Phosphofructokinase 5 334 2.8E-62 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS07780 ceceeca43c14b99453907d09e8b20dc7 313 Gene3D G3DSA:2.60.120.650 22 237 6.5E-17 T 22-04-2016 NHAM_RS07780 ceceeca43c14b99453907d09e8b20dc7 313 SMART SM00558 101 247 0.0017 T 22-04-2016 IPR003347 JmjC domain NHAM_RS07780 ceceeca43c14b99453907d09e8b20dc7 313 Pfam PF13621 Cupin-like domain 100 235 2.8E-8 T 22-04-2016 NHAM_RS07780 ceceeca43c14b99453907d09e8b20dc7 313 SUPERFAMILY SSF51197 20 302 1.08E-30 T 22-04-2016 NHAM_RS09045 50eabff89f7c7cda0f13cbebd009b8a2 360 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 353 8.0E-103 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS09045 50eabff89f7c7cda0f13cbebd009b8a2 360 Pfam PF02547 Queuosine biosynthesis protein 4 353 3.5E-120 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS09045 50eabff89f7c7cda0f13cbebd009b8a2 360 PANTHER PTHR30307 2 360 1.4E-149 T 22-04-2016 NHAM_RS09045 50eabff89f7c7cda0f13cbebd009b8a2 360 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 354 42.222 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS09045 50eabff89f7c7cda0f13cbebd009b8a2 360 Gene3D G3DSA:3.40.1780.10 191 353 5.8E-92 T 22-04-2016 NHAM_RS09045 50eabff89f7c7cda0f13cbebd009b8a2 360 Gene3D G3DSA:3.40.1780.10 1 61 5.8E-92 T 22-04-2016 NHAM_RS09045 50eabff89f7c7cda0f13cbebd009b8a2 360 Gene3D G3DSA:2.40.10.240 64 147 5.9E-15 T 22-04-2016 NHAM_RS09045 50eabff89f7c7cda0f13cbebd009b8a2 360 SUPERFAMILY SSF111337 1 353 5.75E-124 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS09045 50eabff89f7c7cda0f13cbebd009b8a2 360 PANTHER PTHR30307:SF0 2 360 1.4E-149 T 22-04-2016 NHAM_RS08960 135310b244f63b4c3e4192bda628f663 114 Pfam PF00920 Dehydratase family 30 97 7.9E-14 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS08960 135310b244f63b4c3e4192bda628f663 114 PANTHER PTHR21000:SF5 30 100 1.7E-19 T 22-04-2016 NHAM_RS08960 135310b244f63b4c3e4192bda628f663 114 PANTHER PTHR21000 30 100 1.7E-19 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS08960 135310b244f63b4c3e4192bda628f663 114 SUPERFAMILY SSF52016 30 101 2.43E-13 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NHAM_RS12155 5dc8c3c82ecef35e4c43e77ba6268bdc 349 PIRSF PIRSF020481 4 346 1.6E-50 T 22-04-2016 IPR014507 Baseplate assembly protein J, predicted NHAM_RS12155 5dc8c3c82ecef35e4c43e77ba6268bdc 349 Pfam PF04865 Baseplate J-like protein 121 299 3.6E-21 T 22-04-2016 IPR006949 Baseplate protein J-like NHAM_RS12155 5dc8c3c82ecef35e4c43e77ba6268bdc 349 PANTHER PTHR35862:SF1 211 324 9.6E-25 T 22-04-2016 NHAM_RS12155 5dc8c3c82ecef35e4c43e77ba6268bdc 349 PANTHER PTHR35862:SF1 1 177 9.6E-25 T 22-04-2016 NHAM_RS12155 5dc8c3c82ecef35e4c43e77ba6268bdc 349 PANTHER PTHR35862 211 324 9.6E-25 T 22-04-2016 NHAM_RS12155 5dc8c3c82ecef35e4c43e77ba6268bdc 349 PANTHER PTHR35862 1 177 9.6E-25 T 22-04-2016 NHAM_RS18445 a325803c9d6131edf997d961a1d347cd 169 Gene3D G3DSA:2.60.40.200 25 169 4.6E-49 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS18445 a325803c9d6131edf997d961a1d347cd 169 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 157 168 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 NHAM_RS18445 a325803c9d6131edf997d961a1d347cd 169 PANTHER PTHR10003 1 168 1.7E-43 T 22-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 NHAM_RS18445 a325803c9d6131edf997d961a1d347cd 169 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 36 168 8.6E-42 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS18445 a325803c9d6131edf997d961a1d347cd 169 PANTHER PTHR10003:SF11 1 168 1.7E-43 T 22-04-2016 NHAM_RS18445 a325803c9d6131edf997d961a1d347cd 169 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 100 109 4.03E-11 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS18445 a325803c9d6131edf997d961a1d347cd 169 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 143 169 4.03E-11 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS18445 a325803c9d6131edf997d961a1d347cd 169 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 64 86 4.03E-11 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS18445 a325803c9d6131edf997d961a1d347cd 169 SUPERFAMILY SSF49329 27 168 2.09E-44 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 NHAM_RS03310 b10c5b6071371bcd68310c10976e0a80 272 Pfam PF00005 ABC transporter 41 196 4.6E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS03310 b10c5b6071371bcd68310c10976e0a80 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 2.1E-118 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 NHAM_RS03310 b10c5b6071371bcd68310c10976e0a80 272 Gene3D G3DSA:3.40.50.300 21 265 3.3E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03310 b10c5b6071371bcd68310c10976e0a80 272 PANTHER PTHR24220:SF560 27 267 1.4E-134 T 22-04-2016 NHAM_RS03310 b10c5b6071371bcd68310c10976e0a80 272 PANTHER PTHR24220 27 267 1.4E-134 T 22-04-2016 NHAM_RS03310 b10c5b6071371bcd68310c10976e0a80 272 SUPERFAMILY SSF52540 27 258 9.41E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03310 b10c5b6071371bcd68310c10976e0a80 272 SMART SM00382 50 252 4.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS03310 b10c5b6071371bcd68310c10976e0a80 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS11825 780b3d68a3dd6ee2bb1e92b56fffdb8f 487 Pfam PF00270 DEAD/DEAH box helicase 25 192 1.0E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NHAM_RS11825 780b3d68a3dd6ee2bb1e92b56fffdb8f 487 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NHAM_RS11825 780b3d68a3dd6ee2bb1e92b56fffdb8f 487 SMART SM00490 259 340 9.7E-34 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS11825 780b3d68a3dd6ee2bb1e92b56fffdb8f 487 Gene3D G3DSA:3.40.50.300 1 209 4.3E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11825 780b3d68a3dd6ee2bb1e92b56fffdb8f 487 PANTHER PTHR24031 1 437 7.1E-175 T 22-04-2016 NHAM_RS11825 780b3d68a3dd6ee2bb1e92b56fffdb8f 487 Gene3D G3DSA:3.40.50.300 210 373 2.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11825 780b3d68a3dd6ee2bb1e92b56fffdb8f 487 PANTHER PTHR24031:SF261 1 437 7.1E-175 T 22-04-2016 NHAM_RS11825 780b3d68a3dd6ee2bb1e92b56fffdb8f 487 SMART SM00487 20 220 9.9E-62 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS11825 780b3d68a3dd6ee2bb1e92b56fffdb8f 487 Pfam PF00271 Helicase conserved C-terminal domain 231 340 1.8E-30 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS11825 780b3d68a3dd6ee2bb1e92b56fffdb8f 487 SUPERFAMILY SSF52540 73 360 6.21E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 206 221 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 SUPERFAMILY SSF52418 166 415 1.83E-66 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 Hamap MF_00703 Putative thymidine phosphorylase. 12 502 56.009 T 22-04-2016 IPR028579 Putative thymidine phosphorylase KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 SUPERFAMILY SSF47648 101 166 7.06E-10 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 Gene3D G3DSA:3.90.1170.30 422 503 1.2E-18 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 PANTHER PTHR10515:SF0 75 510 1.1E-150 T 22-04-2016 NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 Gene3D G3DSA:3.40.1030.10 166 415 3.9E-70 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 SUPERFAMILY SSF54680 421 502 6.28E-18 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 434 498 4.8E-13 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 SMART SM00941 434 500 2.2E-23 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 Gene3D G3DSA:1.20.970.10 101 163 1.2E-6 T 22-04-2016 NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 Pfam PF00591 Glycosyl transferase family, a/b domain 172 270 1.7E-8 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 Pfam PF02885 Glycosyl transferase family, helical bundle domain 103 162 1.1E-4 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 PANTHER PTHR10515 75 510 1.1E-150 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 NHAM_RS09705 98955c0bca364294fcd1ecb7686c7ff2 510 TIGRFAM TIGR02645 ARCH_P_rylase: putative thymidine phosphorylase 12 492 2.3E-204 T 22-04-2016 IPR013466 Thymidine phosphorylase/AMP phosphorylase GO:0016763 NHAM_RS03045 cd6f6d02797f96676f06afff12c0a146 189 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 NHAM_RS03045 cd6f6d02797f96676f06afff12c0a146 189 SUPERFAMILY SSF53041 5 139 1.7E-41 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS03045 cd6f6d02797f96676f06afff12c0a146 189 PANTHER PTHR30461 1 189 1.8E-46 T 22-04-2016 NHAM_RS03045 cd6f6d02797f96676f06afff12c0a146 189 SMART SM00857 4 141 1.6E-55 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS03045 cd6f6d02797f96676f06afff12c0a146 189 Gene3D G3DSA:1.10.10.60 143 185 1.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS03045 cd6f6d02797f96676f06afff12c0a146 189 Pfam PF00239 Resolvase, N terminal domain 5 140 1.2E-43 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS03045 cd6f6d02797f96676f06afff12c0a146 189 Gene3D G3DSA:3.40.50.1390 5 125 1.0E-39 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS03045 cd6f6d02797f96676f06afff12c0a146 189 SUPERFAMILY SSF46689 143 184 8.78E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS03045 cd6f6d02797f96676f06afff12c0a146 189 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 128 138 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 245 387 8.0E-65 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 Gene3D G3DSA:3.30.300.10 148 245 7.7E-33 T 22-04-2016 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 SUPERFAMILY SSF55973 245 396 3.77E-65 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 SUPERFAMILY SSF55973 124 243 1.77E-42 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 PANTHER PTHR11964 1 393 1.8E-199 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 271 279 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 SUPERFAMILY SSF55973 4 117 5.49E-33 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 397 2.7E-144 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 Gene3D G3DSA:3.30.300.10 12 147 1.1E-33 T 22-04-2016 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 110 8.7E-34 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 Gene3D G3DSA:3.30.300.10 256 397 1.6E-65 T 22-04-2016 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 398 46.84 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 PIRSF PIRSF000497 1 398 1.1E-154 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 Pfam PF02772 S-adenosylmethionine synthetase, central domain 127 243 4.5E-39 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 NHAM_RS14105 842aa1a86a1ec846b431384ae69ec74c 398 PANTHER PTHR11964:SF1 1 393 1.8E-199 T 22-04-2016 NHAM_RS09390 5ff654ebcce71bcb9e98bcd1f0e5643c 349 SUPERFAMILY SSF51395 27 340 1.37E-82 T 22-04-2016 NHAM_RS09390 5ff654ebcce71bcb9e98bcd1f0e5643c 349 Pfam PF01207 Dihydrouridine synthase (Dus) 30 304 1.0E-94 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NHAM_RS09390 5ff654ebcce71bcb9e98bcd1f0e5643c 349 PANTHER PTHR11082 16 347 5.4E-116 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NHAM_RS09390 5ff654ebcce71bcb9e98bcd1f0e5643c 349 PIRSF PIRSF006621 17 346 1.0E-93 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NHAM_RS09390 5ff654ebcce71bcb9e98bcd1f0e5643c 349 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 19 308 3.1E-98 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 NHAM_RS09390 5ff654ebcce71bcb9e98bcd1f0e5643c 349 Gene3D G3DSA:3.20.20.70 24 260 1.5E-76 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS09390 5ff654ebcce71bcb9e98bcd1f0e5643c 349 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 109 127 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 NHAM_RS09390 5ff654ebcce71bcb9e98bcd1f0e5643c 349 PANTHER PTHR11082:SF25 16 347 5.4E-116 T 22-04-2016 NHAM_RS02390 fe2cd8e54f0f3c80d6878e3a2e14bb57 138 Pfam PF01230 HIT domain 13 100 4.9E-16 T 22-04-2016 IPR001310 Histidine triad (HIT) protein NHAM_RS02390 fe2cd8e54f0f3c80d6878e3a2e14bb57 138 PANTHER PTHR23089 18 134 8.1E-30 T 22-04-2016 IPR001310 Histidine triad (HIT) protein NHAM_RS02390 fe2cd8e54f0f3c80d6878e3a2e14bb57 138 SUPERFAMILY SSF54197 14 135 2.55E-33 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 NHAM_RS02390 fe2cd8e54f0f3c80d6878e3a2e14bb57 138 Gene3D G3DSA:3.30.428.10 8 135 1.7E-33 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 NHAM_RS02390 fe2cd8e54f0f3c80d6878e3a2e14bb57 138 PIRSF PIRSF000714 4 136 5.7E-47 T 22-04-2016 IPR026026 Histidine triad hydrolase, Hint-type NHAM_RS02390 fe2cd8e54f0f3c80d6878e3a2e14bb57 138 PANTHER PTHR23089:SF13 18 134 8.1E-30 T 22-04-2016 NHAM_RS18740 30c24394b7df051bdae8deb20f2d25ad 110 SUPERFAMILY SSF50346 3 101 2.16E-14 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS18740 30c24394b7df051bdae8deb20f2d25ad 110 PANTHER PTHR36505:SF1 1 110 9.1E-32 T 22-04-2016 NHAM_RS18740 30c24394b7df051bdae8deb20f2d25ad 110 Gene3D G3DSA:2.30.30.240 16 65 1.2E-7 T 22-04-2016 NHAM_RS18740 30c24394b7df051bdae8deb20f2d25ad 110 PANTHER PTHR36505 1 110 9.1E-32 T 22-04-2016 NHAM_RS19310 b1b0b6323f6b7ade3b99f6219c6a8794 1087 Gene3D G3DSA:3.20.20.140 12 239 2.1E-12 T 22-04-2016 NHAM_RS19310 b1b0b6323f6b7ade3b99f6219c6a8794 1087 SUPERFAMILY SSF89550 12 245 2.94E-11 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 NHAM_RS19310 b1b0b6323f6b7ade3b99f6219c6a8794 1087 Gene3D G3DSA:1.10.150.280 802 845 2.2E-4 T 22-04-2016 NHAM_RS19310 b1b0b6323f6b7ade3b99f6219c6a8794 1087 PANTHER PTHR32294:SF4 1 1025 0.0 T 22-04-2016 NHAM_RS19310 b1b0b6323f6b7ade3b99f6219c6a8794 1087 PANTHER PTHR32294 1 1025 0.0 T 22-04-2016 NHAM_RS19310 b1b0b6323f6b7ade3b99f6219c6a8794 1087 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 274 696 5.5E-147 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS19310 b1b0b6323f6b7ade3b99f6219c6a8794 1087 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 984 4.0E-166 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS19310 b1b0b6323f6b7ade3b99f6219c6a8794 1087 Pfam PF02811 PHP domain 7 122 5.9E-13 T 22-04-2016 IPR004013 PHP domain GO:0003824 NHAM_RS19310 b1b0b6323f6b7ade3b99f6219c6a8794 1087 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 5 1087 13.78 T 22-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS19310 b1b0b6323f6b7ade3b99f6219c6a8794 1087 SMART SM00481 6 73 2.4E-13 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 NHAM_RS19310 b1b0b6323f6b7ade3b99f6219c6a8794 1087 Pfam PF01336 OB-fold nucleic acid binding domain 952 1024 1.5E-6 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 NHAM_RS19310 b1b0b6323f6b7ade3b99f6219c6a8794 1087 Pfam PF14579 Helix-hairpin-helix motif 770 861 2.4E-23 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS05030 7b5c5412592ce3637caef604969a5560 397 Pfam PF01761 3-dehydroquinate synthase 91 335 9.8E-72 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 NHAM_RS05030 7b5c5412592ce3637caef604969a5560 397 PANTHER PTHR21090 91 392 6.7E-65 T 22-04-2016 NHAM_RS05030 7b5c5412592ce3637caef604969a5560 397 Gene3D G3DSA:1.20.1090.10 198 385 9.6E-39 T 22-04-2016 NHAM_RS05030 7b5c5412592ce3637caef604969a5560 397 SUPERFAMILY SSF56796 14 387 4.84E-78 T 22-04-2016 NHAM_RS05030 7b5c5412592ce3637caef604969a5560 397 Gene3D G3DSA:3.40.50.1970 15 196 6.0E-42 T 22-04-2016 NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 Gene3D G3DSA:3.30.365.10 464 632 1.5E-50 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 PANTHER PTHR11908:SF85 3 585 0.0 T 22-04-2016 NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 PANTHER PTHR11908:SF85 602 778 0.0 T 22-04-2016 NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 SUPERFAMILY SSF54665 5 162 1.14E-50 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 Gene3D G3DSA:3.90.1170.50 4 128 5.3E-43 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 Gene3D G3DSA:3.30.365.10 295 371 6.3E-51 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 Gene3D G3DSA:3.30.365.10 129 186 6.3E-51 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 20 140 4.5E-31 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 Gene3D G3DSA:3.30.365.10 633 778 1.5E-65 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 Gene3D G3DSA:3.30.365.10 374 463 1.5E-65 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 SMART SM01008 20 140 3.9E-59 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 PANTHER PTHR11908 3 585 0.0 T 22-04-2016 NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 PANTHER PTHR11908 602 778 0.0 T 22-04-2016 NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 SUPERFAMILY SSF56003 132 777 3.01E-205 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 156 718 2.5E-177 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS07430 182cc1cdf795eefca1abfcd64c7b7885 779 Gene3D G3DSA:3.30.365.10 187 293 8.2E-36 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS01445 a11969af9c561b49b71b9f8330bf2dc2 429 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 427 43.798 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS01445 a11969af9c561b49b71b9f8330bf2dc2 429 PANTHER PTHR21090 1 429 9.0E-167 T 22-04-2016 NHAM_RS01445 a11969af9c561b49b71b9f8330bf2dc2 429 Gene3D G3DSA:3.65.10.10 232 427 8.4E-54 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 NHAM_RS01445 a11969af9c561b49b71b9f8330bf2dc2 429 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 426 1.9E-162 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS01445 a11969af9c561b49b71b9f8330bf2dc2 429 Gene3D G3DSA:3.65.10.10 21 231 3.7E-68 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 NHAM_RS01445 a11969af9c561b49b71b9f8330bf2dc2 429 SUPERFAMILY SSF55205 1 428 1.18E-131 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 NHAM_RS01445 a11969af9c561b49b71b9f8330bf2dc2 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 417 2.1E-93 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 NHAM_RS05830 c88fdaa4b13ea25c5d1aad4a1087dad0 295 Gene3D G3DSA:3.40.630.40 6 282 3.2E-98 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NHAM_RS05830 c88fdaa4b13ea25c5d1aad4a1087dad0 295 SUPERFAMILY SSF53187 11 282 1.22E-84 T 22-04-2016 NHAM_RS05830 c88fdaa4b13ea25c5d1aad4a1087dad0 295 Pfam PF05013 N-formylglutamate amidohydrolase 22 254 2.3E-70 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase NHAM_RS09840 4186cf13944e645389044caeb1dc81ee 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 128 3.9E-30 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NHAM_RS09840 4186cf13944e645389044caeb1dc81ee 345 Pfam PF00107 Zinc-binding dehydrogenase 177 291 4.3E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NHAM_RS09840 4186cf13944e645389044caeb1dc81ee 345 SMART SM00829 8 343 0.0015 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NHAM_RS09840 4186cf13944e645389044caeb1dc81ee 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 NHAM_RS09840 4186cf13944e645389044caeb1dc81ee 345 Gene3D G3DSA:3.40.50.720 172 287 3.6E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS09840 4186cf13944e645389044caeb1dc81ee 345 Gene3D G3DSA:3.90.180.10 1 171 3.2E-55 T 22-04-2016 IPR011032 GroES-like NHAM_RS09840 4186cf13944e645389044caeb1dc81ee 345 SUPERFAMILY SSF50129 1 155 1.83E-55 T 22-04-2016 IPR011032 GroES-like NHAM_RS09840 4186cf13944e645389044caeb1dc81ee 345 PANTHER PTHR11695:SF559 12 344 6.5E-120 T 22-04-2016 NHAM_RS09840 4186cf13944e645389044caeb1dc81ee 345 SUPERFAMILY SSF51735 141 303 2.82E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS09840 4186cf13944e645389044caeb1dc81ee 345 PANTHER PTHR11695 12 344 6.5E-120 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NHAM_RS06680 872f394a3df7898b4347fdba00ebff26 81 PANTHER PTHR30154 1 78 1.0E-12 T 22-04-2016 NHAM_RS06680 872f394a3df7898b4347fdba00ebff26 81 SUPERFAMILY SSF54909 2 77 3.75E-16 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel NHAM_RS06680 872f394a3df7898b4347fdba00ebff26 81 PANTHER PTHR30154:SF12 1 78 1.0E-12 T 22-04-2016 NHAM_RS06680 872f394a3df7898b4347fdba00ebff26 81 Pfam PF01037 Lrp/AsnC ligand binding domain 7 76 1.5E-12 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NHAM_RS06680 872f394a3df7898b4347fdba00ebff26 81 Gene3D G3DSA:3.30.70.920 5 77 3.5E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NHAM_RS14395 89bddf1daad35c7844921af8745fbd29 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 277 1.6E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NHAM_RS14395 89bddf1daad35c7844921af8745fbd29 291 PANTHER PTHR11795:SF379 1 290 7.7E-82 T 22-04-2016 NHAM_RS14395 89bddf1daad35c7844921af8745fbd29 291 PANTHER PTHR11795 1 290 7.7E-82 T 22-04-2016 NHAM_RS07605 2bfb12ebfce2b1ad2d93bc8895c77307 482 SUPERFAMILY SSF52374 2 335 8.16E-85 T 22-04-2016 NHAM_RS07605 2bfb12ebfce2b1ad2d93bc8895c77307 482 SMART SM00840 359 417 0.0043 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 NHAM_RS07605 2bfb12ebfce2b1ad2d93bc8895c77307 482 PANTHER PTHR10890 1 481 1.2E-196 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NHAM_RS07605 2bfb12ebfce2b1ad2d93bc8895c77307 482 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 469 2.7E-133 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 NHAM_RS07605 2bfb12ebfce2b1ad2d93bc8895c77307 482 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 64 73 8.7E-32 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NHAM_RS07605 2bfb12ebfce2b1ad2d93bc8895c77307 482 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 206 224 8.7E-32 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NHAM_RS07605 2bfb12ebfce2b1ad2d93bc8895c77307 482 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 237 258 8.7E-32 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NHAM_RS07605 2bfb12ebfce2b1ad2d93bc8895c77307 482 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 8.7E-32 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NHAM_RS07605 2bfb12ebfce2b1ad2d93bc8895c77307 482 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 480 35.605 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 NHAM_RS07605 2bfb12ebfce2b1ad2d93bc8895c77307 482 SUPERFAMILY SSF47323 333 470 1.7E-23 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS07605 2bfb12ebfce2b1ad2d93bc8895c77307 482 Gene3D G3DSA:3.40.50.620 20 328 1.7E-97 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS07605 2bfb12ebfce2b1ad2d93bc8895c77307 482 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 336 1.8E-111 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 NHAM_RS13185 bbc48dc23d2035132db946810696586e 72 Pfam PF11324 Protein of unknown function (DUF3126) 5 67 1.7E-32 T 22-04-2016 IPR021473 Protein of unknown function DUF3126 NHAM_RS19055 a0e3515b6892c9b92d66b0a9c7a72bb2 287 SMART SM00382 97 233 3.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS19055 a0e3515b6892c9b92d66b0a9c7a72bb2 287 PIRSF PIRSF003073 1 251 7.7E-72 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein NHAM_RS19055 a0e3515b6892c9b92d66b0a9c7a72bb2 287 PANTHER PTHR30050 1 243 9.5E-115 T 22-04-2016 NHAM_RS19055 a0e3515b6892c9b92d66b0a9c7a72bb2 287 SUPERFAMILY SSF52540 92 231 2.37E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19055 a0e3515b6892c9b92d66b0a9c7a72bb2 287 Pfam PF01695 IstB-like ATP binding protein 54 229 1.8E-58 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 NHAM_RS19055 a0e3515b6892c9b92d66b0a9c7a72bb2 287 PANTHER PTHR30050:SF6 1 243 9.5E-115 T 22-04-2016 NHAM_RS19055 a0e3515b6892c9b92d66b0a9c7a72bb2 287 Gene3D G3DSA:3.40.50.300 94 230 4.0E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04635 a0e3515b6892c9b92d66b0a9c7a72bb2 287 SMART SM00382 97 233 3.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS04635 a0e3515b6892c9b92d66b0a9c7a72bb2 287 PIRSF PIRSF003073 1 251 7.7E-72 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein NHAM_RS04635 a0e3515b6892c9b92d66b0a9c7a72bb2 287 PANTHER PTHR30050 1 243 9.5E-115 T 22-04-2016 NHAM_RS04635 a0e3515b6892c9b92d66b0a9c7a72bb2 287 SUPERFAMILY SSF52540 92 231 2.37E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04635 a0e3515b6892c9b92d66b0a9c7a72bb2 287 Pfam PF01695 IstB-like ATP binding protein 54 229 1.8E-58 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 NHAM_RS04635 a0e3515b6892c9b92d66b0a9c7a72bb2 287 PANTHER PTHR30050:SF6 1 243 9.5E-115 T 22-04-2016 NHAM_RS04635 a0e3515b6892c9b92d66b0a9c7a72bb2 287 Gene3D G3DSA:3.40.50.300 94 230 4.0E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10780 0a966b54d5c8e6ec7219c7cd9416db40 67 PIRSF PIRSF002599 1 67 3.4E-21 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 NHAM_RS10780 0a966b54d5c8e6ec7219c7cd9416db40 67 SUPERFAMILY SSF50249 1 65 3.86E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10780 0a966b54d5c8e6ec7219c7cd9416db40 67 PANTHER PTHR11544 1 63 1.7E-21 T 22-04-2016 NHAM_RS10780 0a966b54d5c8e6ec7219c7cd9416db40 67 Gene3D G3DSA:2.40.50.140 1 66 5.4E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10780 0a966b54d5c8e6ec7219c7cd9416db40 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site NHAM_RS10780 0a966b54d5c8e6ec7219c7cd9416db40 67 SMART SM00357 3 67 8.4E-22 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS10780 0a966b54d5c8e6ec7219c7cd9416db40 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 5.4E-23 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10780 0a966b54d5c8e6ec7219c7cd9416db40 67 PRINTS PR00050 Cold shock protein signature 25 34 5.84E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10780 0a966b54d5c8e6ec7219c7cd9416db40 67 PRINTS PR00050 Cold shock protein signature 4 19 5.84E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10780 0a966b54d5c8e6ec7219c7cd9416db40 67 PRINTS PR00050 Cold shock protein signature 40 58 5.84E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 476 492 5.1E-21 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 520 534 5.1E-21 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 5.1E-21 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 5.1E-21 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 PANTHER PTHR22594:SF5 2 303 8.7E-200 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 PANTHER PTHR22594:SF5 371 573 8.7E-200 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 Gene3D G3DSA:2.40.50.140 4 108 6.0E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 Pfam PF01336 OB-fold nucleic acid binding domain 21 104 5.2E-16 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 584 8.2E-177 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 4 565 32.677 T 22-04-2016 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 Gene3D G3DSA:3.30.930.10 136 282 1.8E-97 T 22-04-2016 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 Gene3D G3DSA:3.30.930.10 416 586 1.8E-97 T 22-04-2016 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 SUPERFAMILY SSF55261 295 421 2.45E-34 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 559 1.9E-90 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 Gene3D G3DSA:3.30.1360.30 283 415 5.2E-46 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 PANTHER PTHR22594 2 303 8.7E-200 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 PANTHER PTHR22594 371 573 8.7E-200 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 Pfam PF02938 GAD domain 316 402 4.3E-6 T 22-04-2016 IPR029351 GAD domain NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 SUPERFAMILY SSF50249 4 107 1.62E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 SUPERFAMILY SSF55681 426 585 4.18E-93 T 22-04-2016 NHAM_RS10735 8a64c26f76af7ccbbb095dc5673d9245 590 SUPERFAMILY SSF55681 114 298 4.18E-93 T 22-04-2016 NHAM_RS08345 1045a587ef3a304aeb16e375ced1ea6e 265 PANTHER PTHR11609 13 250 3.8E-120 T 22-04-2016 NHAM_RS08345 1045a587ef3a304aeb16e375ced1ea6e 265 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 15 248 1.4E-66 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 NHAM_RS08345 1045a587ef3a304aeb16e375ced1ea6e 265 SUPERFAMILY SSF56104 23 249 4.58E-79 T 22-04-2016 NHAM_RS08345 1045a587ef3a304aeb16e375ced1ea6e 265 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 14 248 32.521 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 NHAM_RS08345 1045a587ef3a304aeb16e375ced1ea6e 265 ProSitePatterns PS01057 SAICAR synthetase signature 1. 96 110 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 NHAM_RS08345 1045a587ef3a304aeb16e375ced1ea6e 265 Gene3D G3DSA:3.30.470.20 104 233 3.7E-51 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS08345 1045a587ef3a304aeb16e375ced1ea6e 265 PANTHER PTHR11609:SF2 13 250 3.8E-120 T 22-04-2016 NHAM_RS08345 1045a587ef3a304aeb16e375ced1ea6e 265 Pfam PF01259 SAICAR synthetase 16 245 1.0E-61 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 NHAM_RS08345 1045a587ef3a304aeb16e375ced1ea6e 265 Gene3D G3DSA:3.30.200.20 17 103 5.3E-38 T 22-04-2016 NHAM_RS10410 818a523b752377c05e1dbf286f274c76 324 Pfam PF00107 Zinc-binding dehydrogenase 151 254 9.1E-28 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NHAM_RS10410 818a523b752377c05e1dbf286f274c76 324 PANTHER PTHR11695:SF578 16 324 2.5E-131 T 22-04-2016 NHAM_RS10410 818a523b752377c05e1dbf286f274c76 324 SUPERFAMILY SSF51735 112 268 5.22E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS10410 818a523b752377c05e1dbf286f274c76 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 NHAM_RS10410 818a523b752377c05e1dbf286f274c76 324 SUPERFAMILY SSF50129 1 145 8.52E-40 T 22-04-2016 IPR011032 GroES-like NHAM_RS10410 818a523b752377c05e1dbf286f274c76 324 SMART SM00829 11 322 7.7E-30 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NHAM_RS10410 818a523b752377c05e1dbf286f274c76 324 Gene3D G3DSA:3.40.50.720 146 255 6.5E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS10410 818a523b752377c05e1dbf286f274c76 324 PANTHER PTHR11695 16 324 2.5E-131 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NHAM_RS10410 818a523b752377c05e1dbf286f274c76 324 Gene3D G3DSA:3.90.180.10 2 145 2.1E-47 T 22-04-2016 IPR011032 GroES-like NHAM_RS10410 818a523b752377c05e1dbf286f274c76 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 91 1.6E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NHAM_RS05320 61b4bc7615d5b3be2cb6010460943eb3 309 PANTHER PTHR30126 5 293 2.9E-61 T 22-04-2016 NHAM_RS05320 61b4bc7615d5b3be2cb6010460943eb3 309 PANTHER PTHR30126:SF29 5 293 2.9E-61 T 22-04-2016 NHAM_RS05320 61b4bc7615d5b3be2cb6010460943eb3 309 Gene3D G3DSA:3.40.190.10 183 258 3.5E-10 T 22-04-2016 NHAM_RS05320 61b4bc7615d5b3be2cb6010460943eb3 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.3E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS05320 61b4bc7615d5b3be2cb6010460943eb3 309 Gene3D G3DSA:3.40.190.10 110 182 7.2E-7 T 22-04-2016 NHAM_RS05320 61b4bc7615d5b3be2cb6010460943eb3 309 SUPERFAMILY SSF46785 6 90 4.57E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS05320 61b4bc7615d5b3be2cb6010460943eb3 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.0E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS05320 61b4bc7615d5b3be2cb6010460943eb3 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.0E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS05320 61b4bc7615d5b3be2cb6010460943eb3 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.0E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS05320 61b4bc7615d5b3be2cb6010460943eb3 309 SUPERFAMILY SSF53850 105 299 7.78E-27 T 22-04-2016 NHAM_RS05320 61b4bc7615d5b3be2cb6010460943eb3 309 Pfam PF03466 LysR substrate binding domain 109 294 5.8E-23 T 22-04-2016 IPR005119 LysR, substrate-binding NHAM_RS05320 61b4bc7615d5b3be2cb6010460943eb3 309 Gene3D G3DSA:1.10.10.10 6 89 6.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS16775 ba6504afac2349946928f024be02f1e1 267 SUPERFAMILY SSF56784 1 264 1.6E-61 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS16775 ba6504afac2349946928f024be02f1e1 267 PANTHER PTHR10000:SF8 1 266 9.2E-58 T 22-04-2016 NHAM_RS16775 ba6504afac2349946928f024be02f1e1 267 PANTHER PTHR10000 1 266 9.2E-58 T 22-04-2016 NHAM_RS16775 ba6504afac2349946928f024be02f1e1 267 Gene3D G3DSA:3.40.50.1000 179 264 3.9E-42 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS16775 ba6504afac2349946928f024be02f1e1 267 Gene3D G3DSA:3.40.50.1000 1 74 3.9E-42 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS16775 ba6504afac2349946928f024be02f1e1 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 259 4.2E-49 T 22-04-2016 IPR000150 Cof protein GO:0016787 NHAM_RS16775 ba6504afac2349946928f024be02f1e1 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 259 5.6E-58 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS16775 ba6504afac2349946928f024be02f1e1 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 233 2.3E-19 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 NHAM_RS16775 ba6504afac2349946928f024be02f1e1 267 Gene3D G3DSA:3.30.1240.10 85 178 2.3E-10 T 22-04-2016 NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PANTHER PTHR24322:SF446 8 136 9.4E-58 T 22-04-2016 NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PANTHER PTHR24322:SF446 152 184 9.4E-58 T 22-04-2016 NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PANTHER PTHR24322 8 136 9.4E-58 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PANTHER PTHR24322 152 184 9.4E-58 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 SUPERFAMILY SSF51735 3 251 2.78E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 Gene3D G3DSA:3.40.50.720 4 200 7.1E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 Pfam PF00106 short chain dehydrogenase 5 192 4.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS03145 655998dcc87da6bb98bd36be843fe1a5 260 PIRSF PIRSF000126 2 260 1.3E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS23995 a7c448487da46a946e192cf2c08a3204 474 Gene3D G3DSA:3.40.50.300 260 410 3.3E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS23995 a7c448487da46a946e192cf2c08a3204 474 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 263 398 2.4E-10 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS23995 a7c448487da46a946e192cf2c08a3204 474 SUPERFAMILY SSF52540 260 465 2.7E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS23995 a7c448487da46a946e192cf2c08a3204 474 SMART SM00382 259 407 1.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS14505 28c3a61f588b9bc251459091f861b3b4 408 PANTHER PTHR30337 2 311 5.4E-53 T 22-04-2016 NHAM_RS14505 28c3a61f588b9bc251459091f861b3b4 408 Pfam PF00149 Calcineurin-like phosphoesterase 3 197 1.5E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NHAM_RS14505 28c3a61f588b9bc251459091f861b3b4 408 SUPERFAMILY SSF56300 3 310 9.41E-49 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS14505 28c3a61f588b9bc251459091f861b3b4 408 PIRSF PIRSF033091 1 405 4.3E-85 T 22-04-2016 IPR014576 Predicted phosphoesterase, YhaO type NHAM_RS14505 28c3a61f588b9bc251459091f861b3b4 408 PANTHER PTHR30337:SF7 2 311 5.4E-53 T 22-04-2016 NHAM_RS14505 28c3a61f588b9bc251459091f861b3b4 408 Gene3D G3DSA:3.60.21.10 3 243 1.2E-39 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS02215 375b79c38271e57359ecf91c4768f320 340 PANTHER PTHR31528:SF6 1 340 1.2E-169 T 22-04-2016 NHAM_RS02215 375b79c38271e57359ecf91c4768f320 340 Pfam PF09084 NMT1/THI5 like 44 242 2.2E-23 T 22-04-2016 IPR015168 SsuA/THI5-like NHAM_RS02215 375b79c38271e57359ecf91c4768f320 340 PANTHER PTHR31528 1 340 1.2E-169 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 NHAM_RS02215 375b79c38271e57359ecf91c4768f320 340 SUPERFAMILY SSF53850 31 256 6.09E-22 T 22-04-2016 NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 PANTHER PTHR11117 29 713 2.0E-289 T 22-04-2016 NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 SMART SM00881 9 104 7.8E-19 T 22-04-2016 IPR003781 CoA-binding GO:0048037 NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 Gene3D G3DSA:3.40.50.720 2 132 1.2E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 PANTHER PTHR11117:SF8 29 713 2.0E-289 T 22-04-2016 NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 Pfam PF13380 CoA binding domain 14 135 9.8E-20 T 22-04-2016 IPR003781 CoA-binding GO:0048037 NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 Gene3D G3DSA:3.40.50.261 286 449 2.2E-19 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 Gene3D G3DSA:3.40.50.261 133 285 3.8E-37 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 SUPERFAMILY SSF51735 1 140 1.13E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 SUPERFAMILY SSF52210 297 455 2.22E-33 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 Pfam PF13549 ATP-grasp domain 484 708 2.2E-77 T 22-04-2016 NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 SUPERFAMILY SSF52210 130 291 3.4E-47 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 152 289 2.6E-58 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 SUPERFAMILY SSF56059 492 715 6.92E-31 T 22-04-2016 NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 Pfam PF13302 Acetyltransferase (GNAT) domain 743 880 1.4E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 SUPERFAMILY SSF55729 742 890 2.92E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS09790 aa4f2f40b600959ca614e2f3bbc7b8a4 897 Gene3D G3DSA:3.40.630.30 740 887 2.3E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 178 808 4.0E-132 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 Gene3D G3DSA:2.40.50.140 1016 1096 2.1E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 286 715 6.0E-144 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 Gene3D G3DSA:3.20.20.140 17 215 6.7E-5 T 22-04-2016 NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 PANTHER PTHR32294:SF4 897 1162 0.0 T 22-04-2016 NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 PANTHER PTHR32294:SF4 6 827 0.0 T 22-04-2016 NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 Pfam PF01336 OB-fold nucleic acid binding domain 1032 1106 3.7E-8 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 PANTHER PTHR32294 897 1162 0.0 T 22-04-2016 NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 PANTHER PTHR32294 6 827 0.0 T 22-04-2016 NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 Pfam PF14579 Helix-hairpin-helix motif 899 948 5.7E-11 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 SMART SM00481 11 82 1.1E-4 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 10 1164 13.75 T 22-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS13670 772098d949782cab37ebf471d29a906b 1164 Pfam PF02811 PHP domain 17 128 5.9E-6 T 22-04-2016 IPR004013 PHP domain GO:0003824 NHAM_RS02105 c6e708787cad7b053c65ec698fdb31a1 199 PANTHER PTHR36917 7 194 1.4E-67 T 22-04-2016 NHAM_RS02105 c6e708787cad7b053c65ec698fdb31a1 199 Pfam PF04279 Intracellular septation protein A 11 182 4.6E-56 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 NHAM_RS02105 c6e708787cad7b053c65ec698fdb31a1 199 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 10 184 17.726 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 NHAM_RS02105 c6e708787cad7b053c65ec698fdb31a1 199 PANTHER PTHR36917:SF1 7 194 1.4E-67 T 22-04-2016 NHAM_RS02105 c6e708787cad7b053c65ec698fdb31a1 199 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 11 184 1.6E-61 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 871 20.344 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 Pfam PF07517 SecA DEAD-like domain 7 389 3.4E-130 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 SUPERFAMILY SSF52540 405 658 3.33E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 PANTHER PTHR30612 590 951 0.0 T 22-04-2016 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 PANTHER PTHR30612 1 457 0.0 T 22-04-2016 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 PANTHER PTHR30612 480 533 0.0 T 22-04-2016 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 Gene3D G3DSA:3.90.1440.10 231 356 1.1E-49 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 Pfam PF07516 SecA Wing and Scaffold domain 657 868 6.0E-63 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 SUPERFAMILY SSF52540 356 403 4.14E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 SUPERFAMILY SSF52540 7 228 4.14E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 461 1.1E-205 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 Pfam PF01043 SecA preprotein cross-linking domain 232 346 1.1E-41 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 Gene3D G3DSA:1.10.3060.10 688 870 4.0E-52 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 SUPERFAMILY SSF81767 227 356 1.83E-46 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 Pfam PF02810 SEC-C motif 933 951 2.8E-9 T 22-04-2016 IPR004027 SEC-C motif NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 SMART SM00958 228 346 5.5E-73 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 SUPERFAMILY SSF81886 929 941 3.4E-79 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 SUPERFAMILY SSF81886 660 879 3.4E-79 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 Gene3D G3DSA:3.40.50.300 405 658 2.7E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 PRINTS PR00906 SecA protein signature 327 349 6.1E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 PRINTS PR00906 SecA protein signature 170 190 6.1E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 PRINTS PR00906 SecA protein signature 117 127 6.1E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 PRINTS PR00906 SecA protein signature 401 414 6.1E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 PRINTS PR00906 SecA protein signature 63 87 6.1E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 PRINTS PR00906 SecA protein signature 101 115 6.1E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 PRINTS PR00906 SecA protein signature 364 381 6.1E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 ProSitePatterns PS01312 SecA family signature. 513 528 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 SMART SM00957 6 390 6.4E-299 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 Gene3D G3DSA:3.40.50.300 5 228 3.6E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02510 9cf3de7ac19fcb14f2a67ac1454c1412 951 Gene3D G3DSA:3.40.50.300 357 403 3.6E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS21320 dce037bf33f7ed2654f56c4ebefe2755 130 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 85 108 - T 22-04-2016 IPR020595 MnmG-related, conserved site NHAM_RS21320 dce037bf33f7ed2654f56c4ebefe2755 130 PANTHER PTHR11806:SF0 1 130 6.9E-81 T 22-04-2016 NHAM_RS21320 dce037bf33f7ed2654f56c4ebefe2755 130 SUPERFAMILY SSF51905 62 120 6.11E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS21320 dce037bf33f7ed2654f56c4ebefe2755 130 Pfam PF01134 Glucose inhibited division protein A 1 113 1.1E-49 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 NHAM_RS21320 dce037bf33f7ed2654f56c4ebefe2755 130 PANTHER PTHR11806 1 130 6.9E-81 T 22-04-2016 NHAM_RS21320 dce037bf33f7ed2654f56c4ebefe2755 130 Gene3D G3DSA:3.50.50.60 39 117 1.5E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS08385 fc9c2946e939552023e67dd4a3af1ca6 113 SUPERFAMILY SSF52833 1 105 1.68E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS08385 fc9c2946e939552023e67dd4a3af1ca6 113 PANTHER PTHR10293:SF41 2 108 7.5E-74 T 22-04-2016 NHAM_RS08385 fc9c2946e939552023e67dd4a3af1ca6 113 PIRSF PIRSF005894 1 108 1.1E-51 T 22-04-2016 IPR014434 Monothiol glutaredoxin NHAM_RS08385 fc9c2946e939552023e67dd4a3af1ca6 113 Gene3D G3DSA:3.40.30.10 8 101 6.4E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS08385 fc9c2946e939552023e67dd4a3af1ca6 113 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 2.7E-46 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related NHAM_RS08385 fc9c2946e939552023e67dd4a3af1ca6 113 Pfam PF00462 Glutaredoxin 17 81 2.5E-17 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 NHAM_RS08385 fc9c2946e939552023e67dd4a3af1ca6 113 PANTHER PTHR10293 2 108 7.5E-74 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related NHAM_RS13750 1cc1d37fbc5e1f352083577eac36208b 415 Pfam PF01593 Flavin containing amine oxidoreductase 320 412 1.5E-14 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 NHAM_RS13750 1cc1d37fbc5e1f352083577eac36208b 415 Pfam PF01593 Flavin containing amine oxidoreductase 12 284 2.4E-27 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 NHAM_RS13750 1cc1d37fbc5e1f352083577eac36208b 415 Gene3D G3DSA:3.50.50.60 2 82 6.2E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13750 1cc1d37fbc5e1f352083577eac36208b 415 Gene3D G3DSA:3.50.50.60 343 412 6.2E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13750 1cc1d37fbc5e1f352083577eac36208b 415 Gene3D G3DSA:3.50.50.60 141 157 6.2E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13750 1cc1d37fbc5e1f352083577eac36208b 415 Gene3D G3DSA:3.50.50.60 192 268 6.2E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13750 1cc1d37fbc5e1f352083577eac36208b 415 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 5 413 7.4E-141 T 22-04-2016 IPR017830 Squalene-associated FAD-dependent desaturase NHAM_RS13750 1cc1d37fbc5e1f352083577eac36208b 415 SUPERFAMILY SSF51905 372 413 5.67E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13750 1cc1d37fbc5e1f352083577eac36208b 415 SUPERFAMILY SSF51905 1 276 5.67E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13750 1cc1d37fbc5e1f352083577eac36208b 415 PANTHER PTHR10742 7 413 7.5E-21 T 22-04-2016 NHAM_RS14820 5646827a5c49b7fd12e4d124cc76cc59 174 Gene3D G3DSA:2.30.30.240 48 106 3.2E-14 T 22-04-2016 NHAM_RS14820 5646827a5c49b7fd12e4d124cc76cc59 174 SUPERFAMILY SSF50346 48 108 4.51E-15 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS14820 5646827a5c49b7fd12e4d124cc76cc59 174 PANTHER PTHR36505 149 174 9.2E-45 T 22-04-2016 NHAM_RS14820 5646827a5c49b7fd12e4d124cc76cc59 174 PANTHER PTHR36505 1 110 9.2E-45 T 22-04-2016 NHAM_RS14820 5646827a5c49b7fd12e4d124cc76cc59 174 Pfam PF05239 PRC-barrel domain 49 106 7.4E-14 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS14820 5646827a5c49b7fd12e4d124cc76cc59 174 PANTHER PTHR36505:SF2 149 174 9.2E-45 T 22-04-2016 NHAM_RS14820 5646827a5c49b7fd12e4d124cc76cc59 174 PANTHER PTHR36505:SF2 1 110 9.2E-45 T 22-04-2016 NHAM_RS02960 b3b6f898c2046da7e02f37bc17e88005 215 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 32 38 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NHAM_RS02960 b3b6f898c2046da7e02f37bc17e88005 215 Gene3D G3DSA:3.40.50.150 7 214 2.4E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS02960 b3b6f898c2046da7e02f37bc17e88005 215 SUPERFAMILY SSF53335 9 214 7.04E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS02960 b3b6f898c2046da7e02f37bc17e88005 215 PANTHER PTHR13370 17 215 3.8E-28 T 22-04-2016 NHAM_RS02960 b3b6f898c2046da7e02f37bc17e88005 215 Pfam PF01555 DNA methylase 29 132 2.2E-9 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 NHAM_RS02960 b3b6f898c2046da7e02f37bc17e88005 215 Pfam PF01555 DNA methylase 149 210 1.6E-17 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 NHAM_RS02960 b3b6f898c2046da7e02f37bc17e88005 215 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 194 214 9.4E-20 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NHAM_RS02960 b3b6f898c2046da7e02f37bc17e88005 215 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 152 169 9.4E-20 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NHAM_RS02960 b3b6f898c2046da7e02f37bc17e88005 215 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 28 42 9.4E-20 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NHAM_RS02960 b3b6f898c2046da7e02f37bc17e88005 215 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 171 189 9.4E-20 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NHAM_RS05670 0e7a3f2e3b314a9e55ce1e10fc58217b 626 SUPERFAMILY SSF52540 9 174 4.15E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05670 0e7a3f2e3b314a9e55ce1e10fc58217b 626 Pfam PF07664 Ferrous iron transport protein B C terminus 406 459 3.8E-15 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 NHAM_RS05670 0e7a3f2e3b314a9e55ce1e10fc58217b 626 PANTHER PTHR11649 4 157 3.7E-236 T 22-04-2016 NHAM_RS05670 0e7a3f2e3b314a9e55ce1e10fc58217b 626 PANTHER PTHR11649 210 620 3.7E-236 T 22-04-2016 NHAM_RS05670 0e7a3f2e3b314a9e55ce1e10fc58217b 626 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 32 50 5.6E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS05670 0e7a3f2e3b314a9e55ce1e10fc58217b 626 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 5.6E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS05670 0e7a3f2e3b314a9e55ce1e10fc58217b 626 PANTHER PTHR11649:SF37 4 157 3.7E-236 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 NHAM_RS05670 0e7a3f2e3b314a9e55ce1e10fc58217b 626 PANTHER PTHR11649:SF37 210 620 3.7E-236 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 NHAM_RS05670 0e7a3f2e3b314a9e55ce1e10fc58217b 626 Pfam PF07670 Nucleoside recognition 294 386 4.6E-11 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 NHAM_RS05670 0e7a3f2e3b314a9e55ce1e10fc58217b 626 Pfam PF07670 Nucleoside recognition 464 595 2.6E-30 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 NHAM_RS05670 0e7a3f2e3b314a9e55ce1e10fc58217b 626 Pfam PF02421 Ferrous iron transport protein B 10 170 1.7E-49 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 NHAM_RS05670 0e7a3f2e3b314a9e55ce1e10fc58217b 626 Gene3D G3DSA:3.40.50.300 9 182 3.1E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04960 a7526bef64ecc66499737f043296e544 115 Pfam PF13473 Cupredoxin-like domain 16 114 4.4E-24 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain NHAM_RS04960 a7526bef64ecc66499737f043296e544 115 SUPERFAMILY SSF49503 18 114 2.24E-9 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS04960 a7526bef64ecc66499737f043296e544 115 Gene3D G3DSA:2.60.40.420 26 101 7.8E-5 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS02590 c9fd3f230e0d195a3ab5a5edc5af83a0 355 Pfam PF13449 Esterase-like activity of phytase 88 339 7.5E-40 T 22-04-2016 IPR027372 Phytase-like domain NHAM_RS02590 c9fd3f230e0d195a3ab5a5edc5af83a0 355 PANTHER PTHR41519 7 355 5.1E-51 T 22-04-2016 NHAM_RS02590 c9fd3f230e0d195a3ab5a5edc5af83a0 355 PANTHER PTHR41519:SF1 7 355 5.1E-51 T 22-04-2016 NHAM_RS02590 c9fd3f230e0d195a3ab5a5edc5af83a0 355 PIRSF PIRSF031900 6 354 7.3E-119 T 22-04-2016 IPR014567 Uncharacterised conserved protein UCP031900 NHAM_RS06980 48bbb12286b18fb44ef8bce34d2a652e 781 Pfam PF13384 Homeodomain-like domain 674 714 2.1E-6 T 22-04-2016 NHAM_RS06980 48bbb12286b18fb44ef8bce34d2a652e 781 Pfam PF06527 TniQ 18 136 4.8E-6 T 22-04-2016 IPR009492 TniQ NHAM_RS06980 48bbb12286b18fb44ef8bce34d2a652e 781 Gene3D G3DSA:1.10.10.60 673 733 5.5E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS06980 48bbb12286b18fb44ef8bce34d2a652e 781 SUPERFAMILY SSF46689 674 767 9.14E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS01180 9f3ac7bd3779fb524087cbfa6767c35b 230 PANTHER PTHR11935:SF115 23 230 2.5E-115 T 22-04-2016 NHAM_RS01180 9f3ac7bd3779fb524087cbfa6767c35b 230 Gene3D G3DSA:3.60.15.10 19 227 6.1E-58 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS01180 9f3ac7bd3779fb524087cbfa6767c35b 230 SUPERFAMILY SSF56281 21 226 3.93E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS01180 9f3ac7bd3779fb524087cbfa6767c35b 230 PANTHER PTHR11935 23 230 2.5E-115 T 22-04-2016 NHAM_RS01180 9f3ac7bd3779fb524087cbfa6767c35b 230 SMART SM00849 30 210 1.1E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS01180 9f3ac7bd3779fb524087cbfa6767c35b 230 Pfam PF00753 Metallo-beta-lactamase superfamily 27 210 2.0E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 SUPERFAMILY SSF52540 3 303 8.0E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 Pfam PF01926 50S ribosome-binding GTPase 5 126 5.3E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 1.6E-151 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 Gene3D G3DSA:1.10.150.300 133 201 1.6E-24 T 22-04-2016 IPR023192 TGS-like domain NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 SUPERFAMILY SSF81271 281 362 5.89E-35 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 Gene3D G3DSA:3.40.50.300 202 269 7.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 Gene3D G3DSA:3.40.50.300 4 132 7.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 365 43.93 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.6E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 2.6E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 2.6E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.6E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 PANTHER PTHR23305 1 365 5.0E-202 T 22-04-2016 NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 Pfam PF06071 Protein of unknown function (DUF933) 281 364 1.7E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 PIRSF PIRSF006641 1 365 3.8E-154 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 Gene3D G3DSA:3.10.20.30 270 364 3.3E-48 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS15910 8cf5837dff5d4a0146faeaeb56bf7bc6 365 PANTHER PTHR23305:SF12 1 365 5.0E-202 T 22-04-2016 NHAM_RS09410 55d28798234648df7d376747d820857c 456 SUPERFAMILY SSF52172 4 186 2.13E-41 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS09410 55d28798234648df7d376747d820857c 456 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site NHAM_RS09410 55d28798234648df7d376747d820857c 456 Gene3D G3DSA:1.10.8.60 313 388 9.0E-22 T 22-04-2016 NHAM_RS09410 55d28798234648df7d376747d820857c 456 Pfam PF00072 Response regulator receiver domain 5 113 3.2E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS09410 55d28798234648df7d376747d820857c 456 Pfam PF00158 Sigma-54 interaction domain 142 306 3.5E-52 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NHAM_RS09410 55d28798234648df7d376747d820857c 456 Gene3D G3DSA:1.10.10.60 408 454 5.9E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS09410 55d28798234648df7d376747d820857c 456 SMART SM00382 162 303 1.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS09410 55d28798234648df7d376747d820857c 456 Gene3D G3DSA:3.40.50.2300 3 128 1.5E-35 T 22-04-2016 NHAM_RS09410 55d28798234648df7d376747d820857c 456 PANTHER PTHR32071 1 456 2.0E-244 T 22-04-2016 NHAM_RS09410 55d28798234648df7d376747d820857c 456 Pfam PF02954 Bacterial regulatory protein, Fis family 413 452 3.2E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NHAM_RS09410 55d28798234648df7d376747d820857c 456 Gene3D G3DSA:3.40.50.300 141 311 4.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09410 55d28798234648df7d376747d820857c 456 PANTHER PTHR32071:SF17 1 456 2.0E-244 T 22-04-2016 NHAM_RS09410 55d28798234648df7d376747d820857c 456 SMART SM00448 3 116 1.3E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS09410 55d28798234648df7d376747d820857c 456 SUPERFAMILY SSF52540 142 374 1.04E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09410 55d28798234648df7d376747d820857c 456 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NHAM_RS09410 55d28798234648df7d376747d820857c 456 SUPERFAMILY SSF46689 353 455 8.51E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS13190 fd42f90cfb4e890e98656555aae2da62 273 Gene3D G3DSA:2.160.10.10 153 257 7.9E-29 T 22-04-2016 NHAM_RS13190 fd42f90cfb4e890e98656555aae2da62 273 Gene3D G3DSA:1.10.3130.10 17 151 1.7E-47 T 22-04-2016 NHAM_RS13190 fd42f90cfb4e890e98656555aae2da62 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 92 252 1.7E-68 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 NHAM_RS13190 fd42f90cfb4e890e98656555aae2da62 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 212 240 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 NHAM_RS13190 fd42f90cfb4e890e98656555aae2da62 273 PANTHER PTHR23416 15 268 1.2E-133 T 22-04-2016 NHAM_RS13190 fd42f90cfb4e890e98656555aae2da62 273 PANTHER PTHR23416:SF2 15 268 1.2E-133 T 22-04-2016 NHAM_RS13190 fd42f90cfb4e890e98656555aae2da62 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 203 236 4.7E-6 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS13190 fd42f90cfb4e890e98656555aae2da62 273 SMART SM00971 19 123 3.0E-58 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 NHAM_RS13190 fd42f90cfb4e890e98656555aae2da62 273 SUPERFAMILY SSF51161 18 270 1.39E-63 T 22-04-2016 IPR011004 Trimeric LpxA-like NHAM_RS13190 fd42f90cfb4e890e98656555aae2da62 273 Pfam PF06426 Serine acetyltransferase, N-terminal 19 122 3.3E-37 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 NHAM_RS06480 21aa675b466dde093a2ac3e83e5c6038 266 Gene3D G3DSA:1.10.101.10 178 246 1.9E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS06480 21aa675b466dde093a2ac3e83e5c6038 266 PANTHER PTHR30417 4 256 2.8E-74 T 22-04-2016 NHAM_RS06480 21aa675b466dde093a2ac3e83e5c6038 266 Gene3D G3DSA:3.40.80.10 13 172 1.5E-54 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NHAM_RS06480 21aa675b466dde093a2ac3e83e5c6038 266 SMART SM00644 17 154 5.9E-35 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NHAM_RS06480 21aa675b466dde093a2ac3e83e5c6038 266 SUPERFAMILY SSF47090 184 248 1.31E-18 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS06480 21aa675b466dde093a2ac3e83e5c6038 266 Pfam PF01471 Putative peptidoglycan binding domain 188 243 4.6E-16 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS06480 21aa675b466dde093a2ac3e83e5c6038 266 SUPERFAMILY SSF55846 13 170 6.54E-52 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NHAM_RS06480 21aa675b466dde093a2ac3e83e5c6038 266 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 26 154 2.3E-23 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NHAM_RS15515 d8074c395145970e41990f365493894d 437 PANTHER PTHR30386:SF3 148 437 9.8E-140 T 22-04-2016 NHAM_RS15515 d8074c395145970e41990f365493894d 437 PANTHER PTHR30386:SF3 1 109 9.8E-140 T 22-04-2016 NHAM_RS15515 d8074c395145970e41990f365493894d 437 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 15 437 2.2E-125 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 NHAM_RS15515 d8074c395145970e41990f365493894d 437 PANTHER PTHR30386 148 437 9.8E-140 T 22-04-2016 NHAM_RS15515 d8074c395145970e41990f365493894d 437 PANTHER PTHR30386 1 109 9.8E-140 T 22-04-2016 NHAM_RS15515 d8074c395145970e41990f365493894d 437 Pfam PF13533 Biotin-lipoyl like 57 94 2.4E-8 T 22-04-2016 NHAM_RS15515 d8074c395145970e41990f365493894d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 66 86 5.9E-56 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15515 d8074c395145970e41990f365493894d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 416 436 5.9E-56 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15515 d8074c395145970e41990f365493894d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 24 47 5.9E-56 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15515 d8074c395145970e41990f365493894d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 334 358 5.9E-56 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15515 d8074c395145970e41990f365493894d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 401 416 5.9E-56 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15515 d8074c395145970e41990f365493894d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 301 322 5.9E-56 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15515 d8074c395145970e41990f365493894d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 358 381 5.9E-56 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15515 d8074c395145970e41990f365493894d 437 Gene3D G3DSA:2.40.50.100 57 88 1.4E-15 T 22-04-2016 NHAM_RS15515 d8074c395145970e41990f365493894d 437 Gene3D G3DSA:2.40.50.100 286 320 1.4E-15 T 22-04-2016 NHAM_RS15515 d8074c395145970e41990f365493894d 437 Pfam PF13437 HlyD family secretion protein 289 392 5.3E-18 T 22-04-2016 NHAM_RS00555 88a1a269e4aed149f6d7d95767a4a31d 139 PIRSF PIRSF004638 1 139 5.5E-56 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 NHAM_RS00555 88a1a269e4aed149f6d7d95767a4a31d 139 PANTHER PTHR40255 1 139 5.5E-53 T 22-04-2016 NHAM_RS00555 88a1a269e4aed149f6d7d95767a4a31d 139 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 2 139 4.5E-46 T 22-04-2016 IPR014351 Conserved hypothetical protein CHP00701 NHAM_RS00555 88a1a269e4aed149f6d7d95767a4a31d 139 Pfam PF03653 Uncharacterised protein family (UPF0093) 1 139 3.6E-55 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 11 1214 0.0 T 22-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1105 1132 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 Gene3D G3DSA:3.40.50.740 132 173 2.9E-4 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 Gene3D G3DSA:3.40.50.740 91 100 2.9E-4 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 Gene3D G3DSA:3.40.228.10 465 564 4.0E-72 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 Gene3D G3DSA:3.40.228.10 204 319 4.0E-72 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 SUPERFAMILY SSF53706 6 1055 1.68E-297 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 PANTHER PTHR11615:SF35 976 1209 3.3E-284 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 PANTHER PTHR11615:SF35 672 808 3.3E-284 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 PANTHER PTHR11615:SF35 825 849 3.3E-284 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 PANTHER PTHR11615:SF35 17 395 3.3E-284 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 SMART SM00926 26 88 0.0015 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 Pfam PF00384 Molybdopterin oxidoreductase 91 805 2.6E-120 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 Gene3D G3DSA:2.40.40.20 1036 1212 8.8E-39 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 Gene3D G3DSA:2.20.25.90 35 81 8.5E-28 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 Pfam PF01568 Molydopterin dinucleotide binding domain 1067 1176 2.4E-20 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 PANTHER PTHR11615 976 1209 3.3E-284 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 PANTHER PTHR11615 672 808 3.3E-284 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 PANTHER PTHR11615 825 849 3.3E-284 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 PANTHER PTHR11615 17 395 3.3E-284 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 Gene3D G3DSA:3.40.50.740 671 751 2.3E-47 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 Gene3D G3DSA:3.40.50.740 565 636 2.3E-47 T 22-04-2016 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 SUPERFAMILY SSF50692 1064 1212 3.39E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 31 49 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 NHAM_RS15175 cec699b983fba6baa116094ae86283e2 1214 Gene3D G3DSA:3.90.55.10 752 808 3.0E-5 T 22-04-2016 NHAM_RS02950 87cf8c182722f71f74ab9e162fa48435 547 SMART SM00857 15 164 3.4E-44 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS02950 87cf8c182722f71f74ab9e162fa48435 547 SUPERFAMILY SSF53041 14 164 3.14E-29 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS02950 87cf8c182722f71f74ab9e162fa48435 547 Pfam PF00239 Resolvase, N terminal domain 15 162 3.2E-30 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS02950 87cf8c182722f71f74ab9e162fa48435 547 Gene3D G3DSA:3.40.50.1390 14 145 1.8E-24 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS02950 87cf8c182722f71f74ab9e162fa48435 547 Pfam PF13408 Recombinase zinc beta ribbon domain 313 371 6.4E-15 T 22-04-2016 IPR025827 Recombinase zinc beta ribbon domain NHAM_RS02950 87cf8c182722f71f74ab9e162fa48435 547 PANTHER PTHR30461 14 511 3.3E-63 T 22-04-2016 NHAM_RS02950 87cf8c182722f71f74ab9e162fa48435 547 Pfam PF07508 Recombinase 193 298 3.6E-18 T 22-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 NHAM_RS02950 87cf8c182722f71f74ab9e162fa48435 547 PANTHER PTHR30461:SF3 14 511 3.3E-63 T 22-04-2016 NHAM_RS02950 87cf8c182722f71f74ab9e162fa48435 547 ProSitePatterns PS00397 Site-specific recombinases active site. 18 26 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 NHAM_RS09920 fd355de5dc66e7c57b9037599b18d129 226 Pfam PF00571 CBS domain 4 55 1.5E-15 T 22-04-2016 IPR000644 CBS domain NHAM_RS09920 fd355de5dc66e7c57b9037599b18d129 226 Pfam PF00571 CBS domain 93 145 9.8E-12 T 22-04-2016 IPR000644 CBS domain NHAM_RS09920 fd355de5dc66e7c57b9037599b18d129 226 SMART SM00116 10 58 2.9E-13 T 22-04-2016 IPR000644 CBS domain NHAM_RS09920 fd355de5dc66e7c57b9037599b18d129 226 SMART SM00116 99 146 8.3E-9 T 22-04-2016 IPR000644 CBS domain NHAM_RS09920 fd355de5dc66e7c57b9037599b18d129 226 PANTHER PTHR11911 1 210 1.0E-43 T 22-04-2016 NHAM_RS09920 fd355de5dc66e7c57b9037599b18d129 226 SUPERFAMILY SSF54631 1 155 7.58E-35 T 22-04-2016 NHAM_RS09920 fd355de5dc66e7c57b9037599b18d129 226 PIRSF PIRSF036990 1 226 2.4E-82 T 22-04-2016 IPR017080 Uncharacterised conserved protein UCP036990, CBS, BON NHAM_RS09920 fd355de5dc66e7c57b9037599b18d129 226 PANTHER PTHR11911:SF90 1 210 1.0E-43 T 22-04-2016 NHAM_RS09920 fd355de5dc66e7c57b9037599b18d129 226 Pfam PF04972 BON domain 158 221 8.9E-13 T 22-04-2016 IPR007055 BON domain NHAM_RS09920 fd355de5dc66e7c57b9037599b18d129 226 Gene3D G3DSA:3.20.20.70 2 146 3.3E-34 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS15950 6b1be2ad4f72de39445bf01f6f7d9364 363 Gene3D G3DSA:3.40.50.970 23 357 2.8E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS15950 6b1be2ad4f72de39445bf01f6f7d9364 363 PANTHER PTHR11516 44 361 3.5E-122 T 22-04-2016 NHAM_RS15950 6b1be2ad4f72de39445bf01f6f7d9364 363 SUPERFAMILY SSF52518 43 357 7.86E-99 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS15950 6b1be2ad4f72de39445bf01f6f7d9364 363 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 22 357 3.8E-137 T 22-04-2016 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 NHAM_RS15950 6b1be2ad4f72de39445bf01f6f7d9364 363 Pfam PF00676 Dehydrogenase E1 component 48 328 1.1E-78 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 NHAM_RS15950 6b1be2ad4f72de39445bf01f6f7d9364 363 PANTHER PTHR11516:SF1 44 361 3.5E-122 T 22-04-2016 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 Gene3D G3DSA:3.50.50.60 229 428 8.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 127 149 9.4E-16 T 22-04-2016 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 293 9.4E-16 T 22-04-2016 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 389 396 9.4E-16 T 22-04-2016 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 364 9.4E-16 T 22-04-2016 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 SUPERFAMILY SSF51905 125 314 5.79E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 Gene3D G3DSA:2.102.10.10 28 112 1.3E-25 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 PANTHER PTHR22912 112 483 1.7E-121 T 22-04-2016 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 SUPERFAMILY SSF55424 431 504 4.26E-18 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 127 419 1.6E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 Gene3D G3DSA:3.30.390.30 438 504 3.2E-13 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 SUPERFAMILY SSF51905 267 428 3.32E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 Pfam PF00355 Rieske [2Fe-2S] domain 23 95 6.9E-13 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 SUPERFAMILY SSF50022 27 109 7.07E-24 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 Gene3D G3DSA:3.50.50.60 125 228 1.2E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 Pfam PF14759 Reductase C-terminal 438 504 1.9E-6 T 22-04-2016 IPR028202 Reductase, C-terminal NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 PANTHER PTHR22912:SF180 112 483 1.7E-121 T 22-04-2016 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 223 241 7.7E-28 T 22-04-2016 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 365 7.7E-28 T 22-04-2016 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 128 147 7.7E-28 T 22-04-2016 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 374 396 7.7E-28 T 22-04-2016 NHAM_RS03445 92b234420cb9592057e8dfd1473d5ec8 506 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 286 7.7E-28 T 22-04-2016 NHAM_RS07170 b925c3446932fc1ad3beb1245f7b3498 171 PANTHER PTHR37421 9 160 9.3E-67 T 22-04-2016 NHAM_RS07170 b925c3446932fc1ad3beb1245f7b3498 171 PIRSF PIRSF006173 7 157 1.1E-66 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 NHAM_RS07170 b925c3446932fc1ad3beb1245f7b3498 171 PANTHER PTHR37421:SF1 9 160 9.3E-67 T 22-04-2016 NHAM_RS07170 b925c3446932fc1ad3beb1245f7b3498 171 Pfam PF03692 Putative zinc- or iron-chelating domain 33 100 7.4E-7 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein NHAM_RS07170 b925c3446932fc1ad3beb1245f7b3498 171 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 11 157 42.239 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 NHAM_RS16765 ad68c062373bb3a0911b662d61cb69f6 247 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 21 243 5.2E-52 T 22-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 NHAM_RS16765 ad68c062373bb3a0911b662d61cb69f6 247 PANTHER PTHR11054 15 243 8.1E-62 T 22-04-2016 NHAM_RS16765 ad68c062373bb3a0911b662d61cb69f6 247 Gene3D G3DSA:3.40.50.1360 13 243 5.6E-64 T 22-04-2016 NHAM_RS16765 ad68c062373bb3a0911b662d61cb69f6 247 SUPERFAMILY SSF100950 11 244 1.36E-57 T 22-04-2016 NHAM_RS16765 ad68c062373bb3a0911b662d61cb69f6 247 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 236 2.5E-62 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 NHAM_RS03945 d07e122b443f5ef0a5608f27c71423af 326 Gene3D G3DSA:1.20.58.340 250 326 4.7E-28 T 22-04-2016 NHAM_RS03945 d07e122b443f5ef0a5608f27c71423af 326 SUPERFAMILY SSF143865 10 265 1.23E-35 T 22-04-2016 NHAM_RS03945 d07e122b443f5ef0a5608f27c71423af 326 PANTHER PTHR21535:SF37 13 326 6.9E-129 T 22-04-2016 NHAM_RS03945 d07e122b443f5ef0a5608f27c71423af 326 Pfam PF01544 CorA-like Mg2+ transporter protein 26 321 3.5E-53 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 NHAM_RS03945 d07e122b443f5ef0a5608f27c71423af 326 SUPERFAMILY SSF144083 261 324 1.57E-21 T 22-04-2016 NHAM_RS03945 d07e122b443f5ef0a5608f27c71423af 326 Gene3D G3DSA:1.20.58.340 133 184 2.4E-4 T 22-04-2016 NHAM_RS03945 d07e122b443f5ef0a5608f27c71423af 326 PANTHER PTHR21535 13 326 6.9E-129 T 22-04-2016 NHAM_RS04685 b8159b5b96dbc18d21bf90b6f2d7d235 472 Gene3D G3DSA:3.40.190.10 146 273 3.9E-11 T 22-04-2016 NHAM_RS04685 b8159b5b96dbc18d21bf90b6f2d7d235 472 PANTHER PTHR30024 10 421 5.7E-38 T 22-04-2016 NHAM_RS04685 b8159b5b96dbc18d21bf90b6f2d7d235 472 PANTHER PTHR30024:SF5 10 421 5.7E-38 T 22-04-2016 NHAM_RS04685 b8159b5b96dbc18d21bf90b6f2d7d235 472 SUPERFAMILY SSF53850 47 338 2.44E-34 T 22-04-2016 NHAM_RS04685 b8159b5b96dbc18d21bf90b6f2d7d235 472 Pfam PF16868 NMT1-like family 35 336 8.4E-14 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family NHAM_RS04685 b8159b5b96dbc18d21bf90b6f2d7d235 472 Gene3D G3DSA:3.40.190.10 274 336 4.4E-16 T 22-04-2016 NHAM_RS04685 b8159b5b96dbc18d21bf90b6f2d7d235 472 Gene3D G3DSA:3.40.190.10 48 125 4.4E-16 T 22-04-2016 NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 SUPERFAMILY SSF47384 208 289 5.89E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 SMART SM00388 224 289 2.8E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 Gene3D G3DSA:3.30.565.10 298 443 8.2E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 Gene3D G3DSA:1.10.287.130 216 285 1.6E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 443 4.1E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 SUPERFAMILY SSF55874 279 443 1.83E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 PANTHER PTHR24423:SF474 162 443 1.9E-66 T 22-04-2016 NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 SMART SM00387 333 444 1.5E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 1.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 420 1.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 398 1.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 442 1.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 289 1.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS05090 b8576d44a8301e922499d1a988df90a7 444 PANTHER PTHR24423 162 443 1.9E-66 T 22-04-2016 NHAM_RS16040 22762db683d3301c8d8e5d0f5f86bd79 198 Gene3D G3DSA:3.30.70.20 3 62 5.0E-22 T 22-04-2016 NHAM_RS16040 22762db683d3301c8d8e5d0f5f86bd79 198 Gene3D G3DSA:3.30.70.20 119 177 5.0E-22 T 22-04-2016 NHAM_RS16040 22762db683d3301c8d8e5d0f5f86bd79 198 PANTHER PTHR11938 141 176 1.2E-103 T 22-04-2016 NHAM_RS16040 22762db683d3301c8d8e5d0f5f86bd79 198 PANTHER PTHR11938 1 123 1.2E-103 T 22-04-2016 NHAM_RS16040 22762db683d3301c8d8e5d0f5f86bd79 198 Pfam PF13247 4Fe-4S dicluster domain 52 164 6.9E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NHAM_RS16040 22762db683d3301c8d8e5d0f5f86bd79 198 PANTHER PTHR11938:SF96 141 176 1.2E-103 T 22-04-2016 NHAM_RS16040 22762db683d3301c8d8e5d0f5f86bd79 198 PANTHER PTHR11938:SF96 1 123 1.2E-103 T 22-04-2016 NHAM_RS16040 22762db683d3301c8d8e5d0f5f86bd79 198 Gene3D G3DSA:3.30.70.20 63 118 4.2E-21 T 22-04-2016 NHAM_RS16040 22762db683d3301c8d8e5d0f5f86bd79 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NHAM_RS16040 22762db683d3301c8d8e5d0f5f86bd79 198 SUPERFAMILY SSF54862 1 180 2.62E-49 T 22-04-2016 NHAM_RS16985 6d92059470dfbb5c6d5e396107d48c59 257 SUPERFAMILY SSF51197 14 196 4.81E-5 T 22-04-2016 NHAM_RS16985 6d92059470dfbb5c6d5e396107d48c59 257 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 98 190 6.0E-9 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.2E-77 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.2E-77 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.2E-77 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.2E-77 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.2E-77 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.2E-77 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 5.2E-77 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.2E-77 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 5.2E-77 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 SUPERFAMILY SSF82693 136 182 1.57E-22 T 22-04-2016 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 SUPERFAMILY SSF82693 268 324 1.57E-22 T 22-04-2016 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 PANTHER PTHR32063:SF21 1 1029 0.0 T 22-04-2016 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 SUPERFAMILY SSF82866 290 490 6.41E-46 T 22-04-2016 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 SUPERFAMILY SSF82714 183 266 4.58E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 Gene3D G3DSA:3.30.2090.10 183 265 7.5E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 Gene3D G3DSA:1.10.3850.10 800 1016 1.8E-55 T 22-04-2016 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 SUPERFAMILY SSF82866 793 1016 2.35E-45 T 22-04-2016 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 Gene3D G3DSA:3.30.2090.10 709 796 3.5E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 Gene3D G3DSA:3.30.70.1430 40 141 7.6E-29 T 22-04-2016 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 SUPERFAMILY SSF82693 556 653 1.2E-14 T 22-04-2016 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 Gene3D G3DSA:3.30.70.1430 558 648 1.6E-9 T 22-04-2016 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 PANTHER PTHR32063 1 1029 0.0 T 22-04-2016 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 Gene3D G3DSA:1.20.1640.10 285 498 2.0E-55 T 22-04-2016 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 SUPERFAMILY SSF82714 709 792 1.44E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 SUPERFAMILY SSF82693 40 130 3.14E-22 T 22-04-2016 NHAM_RS18475 034595d2f30e7305197ced211df38d11 1037 Pfam PF00873 AcrB/AcrD/AcrF family 6 1014 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 7.7E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 Pfam PF00072 Response regulator receiver domain 9 120 7.4E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 SUPERFAMILY SSF52172 4 132 4.55E-27 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 SMART SM00448 7 120 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 PANTHER PTHR26402 7 218 8.8E-100 T 22-04-2016 NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 Gene3D G3DSA:3.40.50.2300 6 132 1.6E-29 T 22-04-2016 NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 Gene3D G3DSA:1.10.10.10 142 210 1.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 9.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 9.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 9.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 SUPERFAMILY SSF46894 140 210 9.52E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 PANTHER PTHR26402:SF474 7 218 8.8E-100 T 22-04-2016 NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 SMART SM00421 151 208 2.6E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS01375 045774194a4e3a68ac615b7486b642ec 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 219 8.1E-55 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 SMART SM01092 226 324 5.2E-33 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 Gene3D G3DSA:3.30.465.10 157 219 5.7E-37 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 Gene3D G3DSA:3.30.465.10 57 113 5.7E-37 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 PANTHER PTHR11908 162 330 4.1E-151 T 22-04-2016 NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 PANTHER PTHR11908 1 119 4.1E-151 T 22-04-2016 NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 SUPERFAMILY SSF55447 224 325 1.23E-29 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 227 323 1.9E-18 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 SUPERFAMILY SSF56176 1 219 6.0E-65 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 PANTHER PTHR11908:SF97 162 330 4.1E-151 T 22-04-2016 NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 PANTHER PTHR11908:SF97 1 119 4.1E-151 T 22-04-2016 NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 Gene3D G3DSA:3.30.390.50 224 326 6.7E-38 T 22-04-2016 NHAM_RS05310 36d11354c1032541bf63db2f6c2e2dc8 338 Gene3D G3DSA:3.30.43.10 1 51 4.5E-19 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 Pfam PF02881 SRP54-type protein, helical bundle domain 25 91 1.5E-6 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 Gene3D G3DSA:3.40.50.300 122 312 2.6E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 285 298 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 PANTHER PTHR11564 7 310 1.9E-118 T 22-04-2016 NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 Gene3D G3DSA:1.20.120.140 42 121 2.8E-19 T 22-04-2016 NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 SMART SM00963 17 96 2.1E-8 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 Pfam PF00448 SRP54-type protein, GTPase domain 111 310 2.2E-73 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 SUPERFAMILY SSF52540 107 311 1.39E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 42 310 1.2E-96 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 PANTHER PTHR11564:SF16 7 310 1.9E-118 T 22-04-2016 NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 SUPERFAMILY SSF47364 12 88 1.96E-15 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 SMART SM00382 110 293 2.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 SMART SM00962 111 312 1.2E-111 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 NHAM_RS02100 2bd895ef5f661dc676b32325b9895f8c 315 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 40 312 57.438 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 Pfam PF01545 Cation efflux family 15 207 5.3E-38 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 SUPERFAMILY SSF160240 380 457 8.11E-14 T 22-04-2016 NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 PANTHER PTHR11562:SF55 316 375 1.3E-77 T 22-04-2016 NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 PANTHER PTHR11562:SF55 5 237 1.3E-77 T 22-04-2016 NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 Gene3D G3DSA:1.20.1510.10 9 207 2.7E-41 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 SUPERFAMILY SSF160240 210 286 2.35E-11 T 22-04-2016 NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 PANTHER PTHR11562 316 375 1.3E-77 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 PANTHER PTHR11562 5 237 1.3E-77 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 SUPERFAMILY SSF160240 292 366 8.24E-14 T 22-04-2016 NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 Gene3D G3DSA:3.30.70.1350 292 367 9.9E-15 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 Gene3D G3DSA:3.30.70.1350 208 286 2.4E-13 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 Gene3D G3DSA:3.30.70.1350 378 457 9.1E-18 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 273 7.4E-61 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 Pfam PF16916 Dimerisation domain of Zinc Transporter 381 457 1.6E-12 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 Pfam PF16916 Dimerisation domain of Zinc Transporter 292 365 1.4E-13 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 Pfam PF16916 Dimerisation domain of Zinc Transporter 215 279 6.6E-7 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain NHAM_RS07410 f52896aefe2cdc5dd3ba53850b09a249 460 SUPERFAMILY SSF161111 9 208 5.1E-47 T 22-04-2016 NHAM_RS09715 3cc9c20a3016de44260e55f01e58e13a 231 SMART SM00116 10 58 5.1E-10 T 22-04-2016 IPR000644 CBS domain NHAM_RS09715 3cc9c20a3016de44260e55f01e58e13a 231 SMART SM00116 97 145 8.2E-10 T 22-04-2016 IPR000644 CBS domain NHAM_RS09715 3cc9c20a3016de44260e55f01e58e13a 231 Gene3D G3DSA:3.20.20.70 2 146 1.6E-35 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS09715 3cc9c20a3016de44260e55f01e58e13a 231 Pfam PF00571 CBS domain 3 55 2.7E-13 T 22-04-2016 IPR000644 CBS domain NHAM_RS09715 3cc9c20a3016de44260e55f01e58e13a 231 Pfam PF00571 CBS domain 90 145 5.0E-13 T 22-04-2016 IPR000644 CBS domain NHAM_RS09715 3cc9c20a3016de44260e55f01e58e13a 231 PANTHER PTHR11911:SF90 1 145 4.8E-43 T 22-04-2016 NHAM_RS09715 3cc9c20a3016de44260e55f01e58e13a 231 PANTHER PTHR11911 1 145 4.8E-43 T 22-04-2016 NHAM_RS09715 3cc9c20a3016de44260e55f01e58e13a 231 PIRSF PIRSF036990 1 229 3.3E-77 T 22-04-2016 IPR017080 Uncharacterised conserved protein UCP036990, CBS, BON NHAM_RS09715 3cc9c20a3016de44260e55f01e58e13a 231 Pfam PF04972 BON domain 157 220 3.2E-12 T 22-04-2016 IPR007055 BON domain NHAM_RS09715 3cc9c20a3016de44260e55f01e58e13a 231 SUPERFAMILY SSF54631 1 144 3.92E-36 T 22-04-2016 NHAM_RS00760 49c6b85046b23766f5f649df143c7d0c 362 Gene3D G3DSA:1.10.10.10 16 101 5.9E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS00760 49c6b85046b23766f5f649df143c7d0c 362 Gene3D G3DSA:3.30.450.40 195 360 3.9E-33 T 22-04-2016 IPR029016 GAF domain-like NHAM_RS00760 49c6b85046b23766f5f649df143c7d0c 362 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 18 353 29.571 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 NHAM_RS00760 49c6b85046b23766f5f649df143c7d0c 362 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 20 360 5.2E-98 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 NHAM_RS00760 49c6b85046b23766f5f649df143c7d0c 362 PIRSF PIRSF005485 16 362 2.0E-103 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 NHAM_RS00760 49c6b85046b23766f5f649df143c7d0c 362 PANTHER PTHR34824 7 360 6.7E-111 T 22-04-2016 NHAM_RS00760 49c6b85046b23766f5f649df143c7d0c 362 Pfam PF01628 HrcA protein C terminal domain 124 346 1.0E-53 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 NHAM_RS00760 49c6b85046b23766f5f649df143c7d0c 362 SUPERFAMILY SSF46785 19 102 1.12E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS00760 49c6b85046b23766f5f649df143c7d0c 362 SUPERFAMILY SSF55781 89 361 2.31E-55 T 22-04-2016 IPR029016 GAF domain-like NHAM_RS14490 777a7e0ad99de93c165d343dace87a8b 547 Gene3D G3DSA:2.120.10.30 279 383 3.4E-10 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NHAM_RS14490 777a7e0ad99de93c165d343dace87a8b 547 Gene3D G3DSA:2.120.10.30 152 194 3.4E-10 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NHAM_RS14490 777a7e0ad99de93c165d343dace87a8b 547 SUPERFAMILY SSF82171 151 241 2.75E-10 T 22-04-2016 NHAM_RS14490 777a7e0ad99de93c165d343dace87a8b 547 SUPERFAMILY SSF82171 316 387 2.75E-10 T 22-04-2016 NHAM_RS14490 777a7e0ad99de93c165d343dace87a8b 547 Pfam PF07007 Protein of unknown function (DUF1311) 23 118 2.8E-11 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 NHAM_RS15720 f4721755d75e6fc50df72963617fdb9b 490 PANTHER PTHR30576 17 490 8.4E-129 T 22-04-2016 NHAM_RS15720 f4721755d75e6fc50df72963617fdb9b 490 Pfam PF13727 CoA-binding domain 93 264 3.1E-11 T 22-04-2016 NHAM_RS15720 f4721755d75e6fc50df72963617fdb9b 490 PANTHER PTHR30576:SF0 17 490 8.4E-129 T 22-04-2016 NHAM_RS15720 f4721755d75e6fc50df72963617fdb9b 490 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 43 490 4.0E-136 T 22-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 NHAM_RS15720 f4721755d75e6fc50df72963617fdb9b 490 Pfam PF02397 Bacterial sugar transferase 300 484 5.3E-57 T 22-04-2016 IPR003362 Bacterial sugar transferase NHAM_RS15720 f4721755d75e6fc50df72963617fdb9b 490 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 43 490 1.1E-115 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase NHAM_RS08080 cf4f5907298afaa1d64f37a443f44471 510 PANTHER PTHR22855 1 510 1.8E-304 T 22-04-2016 NHAM_RS08080 cf4f5907298afaa1d64f37a443f44471 510 SUPERFAMILY SSF52096 253 510 3.23E-87 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS08080 cf4f5907298afaa1d64f37a443f44471 510 Pfam PF01039 Carboxyl transferase domain 27 508 1.1E-185 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS08080 cf4f5907298afaa1d64f37a443f44471 510 SUPERFAMILY SSF52096 3 249 1.03E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS08080 cf4f5907298afaa1d64f37a443f44471 510 Gene3D G3DSA:3.90.226.10 255 510 7.8E-97 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS08080 cf4f5907298afaa1d64f37a443f44471 510 PANTHER PTHR22855:SF40 1 510 1.8E-304 T 22-04-2016 NHAM_RS08080 cf4f5907298afaa1d64f37a443f44471 510 Gene3D G3DSA:3.90.226.10 2 254 6.0E-80 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS10530 cb824105af1d0f583f28d0ab54eb9e8a 506 PANTHER PTHR30085:SF3 203 506 2.6E-141 T 22-04-2016 NHAM_RS10530 cb824105af1d0f583f28d0ab54eb9e8a 506 Gene3D G3DSA:1.10.3720.10 290 501 8.1E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS10530 cb824105af1d0f583f28d0ab54eb9e8a 506 PANTHER PTHR30085 203 506 2.6E-141 T 22-04-2016 NHAM_RS10530 cb824105af1d0f583f28d0ab54eb9e8a 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 312 500 3.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS10530 cb824105af1d0f583f28d0ab54eb9e8a 506 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 292 390 8.4E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NHAM_RS10530 cb824105af1d0f583f28d0ab54eb9e8a 506 SUPERFAMILY SSF161098 291 486 3.79E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS07835 5a744d000a5fff400211f388ac0db2a9 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 124 24.905 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07835 5a744d000a5fff400211f388ac0db2a9 124 Gene3D G3DSA:3.30.1390.10 52 124 7.5E-35 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NHAM_RS07835 5a744d000a5fff400211f388ac0db2a9 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 2.6E-31 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 NHAM_RS07835 5a744d000a5fff400211f388ac0db2a9 124 SUPERFAMILY SSF54736 53 124 1.43E-25 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NHAM_RS07835 5a744d000a5fff400211f388ac0db2a9 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 124 5.0E-27 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 NHAM_RS07835 5a744d000a5fff400211f388ac0db2a9 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 2.8E-18 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07835 5a744d000a5fff400211f388ac0db2a9 124 Gene3D G3DSA:1.20.5.710 5 51 2.0E-16 T 22-04-2016 NHAM_RS07835 5a744d000a5fff400211f388ac0db2a9 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 8.4E-49 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07835 5a744d000a5fff400211f388ac0db2a9 124 SUPERFAMILY SSF48300 3 60 6.28E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS20020 7ecff2b73cb17ccefc14089856899c6f 341 Gene3D G3DSA:3.30.470.30 23 135 9.9E-19 T 22-04-2016 NHAM_RS20020 7ecff2b73cb17ccefc14089856899c6f 341 SUPERFAMILY SSF50249 194 323 3.17E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS20020 7ecff2b73cb17ccefc14089856899c6f 341 PANTHER PTHR10459 1 335 4.3E-120 T 22-04-2016 NHAM_RS20020 7ecff2b73cb17ccefc14089856899c6f 341 PANTHER PTHR10459:SF51 1 335 4.3E-120 T 22-04-2016 NHAM_RS20020 7ecff2b73cb17ccefc14089856899c6f 341 SUPERFAMILY SSF56091 12 191 1.56E-32 T 22-04-2016 NHAM_RS20020 7ecff2b73cb17ccefc14089856899c6f 341 Gene3D G3DSA:3.30.1490.70 150 192 5.2E-9 T 22-04-2016 NHAM_RS20020 7ecff2b73cb17ccefc14089856899c6f 341 Gene3D G3DSA:3.30.1490.70 1 22 5.2E-9 T 22-04-2016 NHAM_RS20020 7ecff2b73cb17ccefc14089856899c6f 341 Pfam PF01068 ATP dependent DNA ligase domain 12 191 8.2E-24 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 NHAM_RS20020 7ecff2b73cb17ccefc14089856899c6f 341 Pfam PF04679 ATP dependent DNA ligase C terminal region 215 313 4.9E-14 T 22-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 NHAM_RS20020 7ecff2b73cb17ccefc14089856899c6f 341 Gene3D G3DSA:2.40.50.140 194 321 7.3E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS08355 38430806bced9d407f88c94606987904 233 PIRSF PIRSF001586 1 232 1.4E-85 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS08355 38430806bced9d407f88c94606987904 233 Gene3D G3DSA:3.40.50.880 1 227 1.1E-37 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS08355 38430806bced9d407f88c94606987904 233 SMART SM01211 1 229 2.5E-128 T 22-04-2016 NHAM_RS08355 38430806bced9d407f88c94606987904 233 SUPERFAMILY SSF52317 1 227 3.57E-72 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS08355 38430806bced9d407f88c94606987904 233 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 227 43.569 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS08355 38430806bced9d407f88c94606987904 233 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 228 3.1E-93 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS08355 38430806bced9d407f88c94606987904 233 PANTHER PTHR10099 1 231 1.7E-114 T 22-04-2016 NHAM_RS08355 38430806bced9d407f88c94606987904 233 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 212 7.4E-42 T 22-04-2016 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 PANTHER PTHR10617:SF107 8 477 1.4E-236 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 Gene3D G3DSA:3.50.50.60 310 450 4.6E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 Gene3D G3DSA:3.50.50.60 14 52 4.6E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 Gene3D G3DSA:3.50.50.60 119 224 4.6E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 Gene3D G3DSA:3.30.70.20 497 539 5.9E-4 T 22-04-2016 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 SUPERFAMILY SSF54373 214 309 2.16E-35 T 22-04-2016 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 SUPERFAMILY SSF51905 8 212 2.42E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 SUPERFAMILY SSF51905 309 452 2.42E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 Pfam PF13450 NAD(P)-binding Rossmann-like domain 18 59 1.3E-6 T 22-04-2016 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 450 551 9.4E-49 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 PANTHER PTHR10617 8 477 1.4E-236 T 22-04-2016 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 SUPERFAMILY SSF54862 454 551 1.43E-28 T 22-04-2016 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 181 196 2.6E-6 T 22-04-2016 NHAM_RS16490 1dfecf4cfe6375c3da2cd93cb4337043 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 15 37 2.6E-6 T 22-04-2016 NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 PANTHER PTHR11451:SF41 5 287 3.4E-41 T 22-04-2016 NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 PANTHER PTHR11451 5 287 3.4E-41 T 22-04-2016 NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 Gene3D G3DSA:3.90.800.10 69 200 1.7E-16 T 22-04-2016 NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 SUPERFAMILY SSF52374 5 288 8.04E-77 T 22-04-2016 NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 2.5E-17 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 202 212 2.5E-17 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 218 226 2.5E-17 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 2.5E-17 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 2.5E-17 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 Gene3D G3DSA:3.40.50.620 204 253 3.7E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 Gene3D G3DSA:3.40.50.620 5 68 3.7E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS17890 25716ba2c42047b15b45d95fdbdd444b 290 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 267 4.9E-45 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 Pfam PF08245 Mur ligase middle domain 104 310 6.8E-41 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 Pfam PF01225 Mur ligase family, catalytic domain 22 94 3.7E-13 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 SUPERFAMILY SSF53623 95 330 1.44E-67 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 415 6.8E-24 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 PANTHER PTHR23135 9 483 4.3E-156 T 22-04-2016 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 Gene3D G3DSA:3.40.1190.10 96 334 1.4E-64 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 Gene3D G3DSA:3.40.1390.10 16 95 1.3E-22 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 Gene3D G3DSA:3.90.190.20 335 473 4.1E-52 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 SUPERFAMILY SSF53244 332 482 6.8E-46 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 20 480 1.1E-132 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 480 30.946 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 PANTHER PTHR23135:SF4 9 483 4.3E-156 T 22-04-2016 NHAM_RS06500 4d699878c2ef2f196aebee07d6576aea 485 SUPERFAMILY SSF63418 15 95 2.22E-21 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS13370 d42fe90526d2f4cd0821137b36a510e8 278 SUPERFAMILY SSF52540 6 264 2.24E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13370 d42fe90526d2f4cd0821137b36a510e8 278 SMART SM00382 32 242 2.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS13370 d42fe90526d2f4cd0821137b36a510e8 278 Gene3D G3DSA:3.40.50.300 5 263 1.4E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13370 d42fe90526d2f4cd0821137b36a510e8 278 PANTHER PTHR24220:SF358 132 275 5.4E-110 T 22-04-2016 NHAM_RS13370 d42fe90526d2f4cd0821137b36a510e8 278 PANTHER PTHR24220:SF358 9 113 5.4E-110 T 22-04-2016 NHAM_RS13370 d42fe90526d2f4cd0821137b36a510e8 278 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 243 264 3.2E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NHAM_RS13370 d42fe90526d2f4cd0821137b36a510e8 278 Pfam PF00005 ABC transporter 24 192 1.9E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS13370 d42fe90526d2f4cd0821137b36a510e8 278 PANTHER PTHR24220 132 275 5.4E-110 T 22-04-2016 NHAM_RS13370 d42fe90526d2f4cd0821137b36a510e8 278 PANTHER PTHR24220 9 113 5.4E-110 T 22-04-2016 NHAM_RS09745 3053f83ad3dbb484385198812f951dc9 145 PANTHER PTHR38342 20 143 7.2E-36 T 22-04-2016 NHAM_RS09745 3053f83ad3dbb484385198812f951dc9 145 Gene3D G3DSA:3.30.310.70 20 143 4.5E-44 T 22-04-2016 IPR005180 Domain of unknown function DUF302 NHAM_RS09745 3053f83ad3dbb484385198812f951dc9 145 PIRSF PIRSF021774 16 145 3.5E-38 T 22-04-2016 IPR016796 Uncharacterised conserved protein UCP021774 NHAM_RS09745 3053f83ad3dbb484385198812f951dc9 145 Pfam PF03625 Domain of unknown function DUF302 50 113 2.9E-26 T 22-04-2016 IPR005180 Domain of unknown function DUF302 NHAM_RS09745 3053f83ad3dbb484385198812f951dc9 145 SUPERFAMILY SSF103247 20 143 3.27E-36 T 22-04-2016 IPR005180 Domain of unknown function DUF302 NHAM_RS02085 e03c7eb26e09311592e41e8585c27140 93 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.0E-21 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 NHAM_RS02085 e03c7eb26e09311592e41e8585c27140 93 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 24.816 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 NHAM_RS02085 e03c7eb26e09311592e41e8585c27140 93 PANTHER PTHR33370 1 83 1.5E-39 T 22-04-2016 NHAM_RS02085 e03c7eb26e09311592e41e8585c27140 93 SUPERFAMILY SSF50249 1 71 6.28E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS02085 e03c7eb26e09311592e41e8585c27140 93 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 3.8E-29 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 NHAM_RS02085 e03c7eb26e09311592e41e8585c27140 93 Gene3D G3DSA:2.40.50.140 1 72 1.8E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS11470 19d8892be7a079fa01760d1b0e016198 266 Gene3D G3DSA:3.30.160.20 195 260 4.1E-22 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain NHAM_RS11470 19d8892be7a079fa01760d1b0e016198 266 SMART SM00535 58 193 6.4E-46 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 NHAM_RS11470 19d8892be7a079fa01760d1b0e016198 266 Gene3D G3DSA:1.10.1520.10 43 187 8.3E-40 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 NHAM_RS11470 19d8892be7a079fa01760d1b0e016198 266 Pfam PF00035 Double-stranded RNA binding motif 197 260 1.6E-14 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain NHAM_RS11470 19d8892be7a079fa01760d1b0e016198 266 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 47 261 1.5E-70 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 NHAM_RS11470 19d8892be7a079fa01760d1b0e016198 266 PANTHER PTHR11207 41 256 7.6E-69 T 22-04-2016 NHAM_RS11470 19d8892be7a079fa01760d1b0e016198 266 SUPERFAMILY SSF69065 37 199 2.27E-43 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 NHAM_RS11470 19d8892be7a079fa01760d1b0e016198 266 SUPERFAMILY SSF54768 153 264 1.24E-26 T 22-04-2016 NHAM_RS11470 19d8892be7a079fa01760d1b0e016198 266 SMART SM00358 197 264 1.7E-22 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain NHAM_RS11470 19d8892be7a079fa01760d1b0e016198 266 Pfam PF14622 Ribonuclease-III-like 57 186 7.9E-30 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 NHAM_RS11470 19d8892be7a079fa01760d1b0e016198 266 ProSitePatterns PS00517 Ribonuclease III family signature. 81 89 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 NHAM_RS11470 19d8892be7a079fa01760d1b0e016198 266 Hamap MF_00104 Ribonuclease 3 [rnc]. 46 260 27.197 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 NHAM_RS11975 c033dc9cb61533002fe0e6183e3a695b 416 PANTHER PTHR30518:SF2 23 364 2.3E-88 T 22-04-2016 NHAM_RS11975 c033dc9cb61533002fe0e6183e3a695b 416 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 178 351 2.5E-59 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like NHAM_RS11975 c033dc9cb61533002fe0e6183e3a695b 416 PANTHER PTHR30518 23 364 2.3E-88 T 22-04-2016 NHAM_RS11975 c033dc9cb61533002fe0e6183e3a695b 416 Gene3D G3DSA:3.30.160.60 326 361 4.8E-14 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 NHAM_RS11975 c033dc9cb61533002fe0e6183e3a695b 416 Pfam PF02618 YceG-like family 76 351 3.0E-84 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like NHAM_RS19035 0cb2879bca968ec067806b2a1997f9c2 333 PANTHER PTHR34135 217 300 2.4E-12 T 22-04-2016 NHAM_RS19035 0cb2879bca968ec067806b2a1997f9c2 333 PANTHER PTHR34135 87 196 2.4E-12 T 22-04-2016 NHAM_RS19035 0cb2879bca968ec067806b2a1997f9c2 333 SUPERFAMILY SSF51445 91 331 3.16E-33 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS19035 0cb2879bca968ec067806b2a1997f9c2 333 Gene3D G3DSA:3.20.20.80 91 332 2.6E-42 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS19035 0cb2879bca968ec067806b2a1997f9c2 333 SMART SM00641 92 206 0.0018 T 22-04-2016 IPR018077 Glycoside hydrolase, family 25 subgroup NHAM_RS19035 0cb2879bca968ec067806b2a1997f9c2 333 PANTHER PTHR34135:SF2 217 300 2.4E-12 T 22-04-2016 NHAM_RS19035 0cb2879bca968ec067806b2a1997f9c2 333 PANTHER PTHR34135:SF2 87 196 2.4E-12 T 22-04-2016 NHAM_RS19035 0cb2879bca968ec067806b2a1997f9c2 333 Pfam PF01183 Glycosyl hydrolases family 25 95 301 3.8E-22 T 22-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 NHAM_RS05695 316da0d1dfba0e970c93f5e1f3453380 290 Pfam PF13505 Outer membrane protein beta-barrel domain 12 260 1.0E-10 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel NHAM_RS05695 316da0d1dfba0e970c93f5e1f3453380 290 Gene3D G3DSA:2.40.160.20 42 274 2.3E-29 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS05695 316da0d1dfba0e970c93f5e1f3453380 290 SUPERFAMILY SSF56925 41 175 8.89E-24 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS05695 316da0d1dfba0e970c93f5e1f3453380 290 SUPERFAMILY SSF56925 203 274 8.89E-24 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS04190 7ea3c52e80b9aa85e612f5e4630f8205 370 SUPERFAMILY SSF46689 32 139 5.73E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS04190 7ea3c52e80b9aa85e612f5e4630f8205 370 PANTHER PTHR30347 1 369 3.3E-187 T 22-04-2016 NHAM_RS04190 7ea3c52e80b9aa85e612f5e4630f8205 370 Pfam PF13358 DDE superfamily endonuclease 176 321 1.5E-20 T 22-04-2016 NHAM_RS04190 7ea3c52e80b9aa85e612f5e4630f8205 370 Gene3D G3DSA:3.30.420.10 209 337 5.8E-9 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS04190 7ea3c52e80b9aa85e612f5e4630f8205 370 SUPERFAMILY SSF53098 213 341 6.07E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS04190 7ea3c52e80b9aa85e612f5e4630f8205 370 Pfam PF13565 Homeodomain-like domain 64 135 3.8E-15 T 22-04-2016 NHAM_RS04190 7ea3c52e80b9aa85e612f5e4630f8205 370 PANTHER PTHR30347:SF1 1 369 3.3E-187 T 22-04-2016 NHAM_RS04190 7ea3c52e80b9aa85e612f5e4630f8205 370 Gene3D G3DSA:1.10.10.10 23 73 1.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03975 36db8c139b70c9468f8ba5222e90d6e5 272 SUPERFAMILY SSF53474 3 269 3.95E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS03975 36db8c139b70c9468f8ba5222e90d6e5 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 7.2E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS03975 36db8c139b70c9468f8ba5222e90d6e5 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 7.2E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS03975 36db8c139b70c9468f8ba5222e90d6e5 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 7.2E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS03975 36db8c139b70c9468f8ba5222e90d6e5 272 Pfam PF12697 Alpha/beta hydrolase family 25 261 1.5E-18 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS03975 36db8c139b70c9468f8ba5222e90d6e5 272 Gene3D G3DSA:3.40.50.1820 4 270 3.1E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS03975 36db8c139b70c9468f8ba5222e90d6e5 272 PANTHER PTHR10992 6 270 9.6E-31 T 22-04-2016 NHAM_RS15375 620fc0e3b1b783decb897d963a94ff37 263 SUPERFAMILY SSF46894 158 228 8.16E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS15375 620fc0e3b1b783decb897d963a94ff37 263 PANTHER PTHR26402:SF151 67 260 7.1E-22 T 22-04-2016 NHAM_RS15375 620fc0e3b1b783decb897d963a94ff37 263 SUPERFAMILY SSF52172 10 125 6.36E-5 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS15375 620fc0e3b1b783decb897d963a94ff37 263 PANTHER PTHR26402 67 260 7.1E-22 T 22-04-2016 NHAM_RS15375 620fc0e3b1b783decb897d963a94ff37 263 ProSitePatterns PS00622 LuxR-type HTH domain signature. 182 209 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS15375 620fc0e3b1b783decb897d963a94ff37 263 Gene3D G3DSA:3.40.50.2300 18 169 6.3E-6 T 22-04-2016 NHAM_RS15375 620fc0e3b1b783decb897d963a94ff37 263 Pfam PF00196 Bacterial regulatory proteins, luxR family 167 220 1.3E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS15375 620fc0e3b1b783decb897d963a94ff37 263 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 198 4.0E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS15375 620fc0e3b1b783decb897d963a94ff37 263 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 210 4.0E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS15375 620fc0e3b1b783decb897d963a94ff37 263 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 182 4.0E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS15375 620fc0e3b1b783decb897d963a94ff37 263 Gene3D G3DSA:1.10.10.10 170 226 7.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS15375 620fc0e3b1b783decb897d963a94ff37 263 SMART SM00421 165 222 1.0E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS11420 cd8d668420c3c9f29a25e1c945b91114 179 Pfam PF06271 RDD family 35 160 4.6E-17 T 22-04-2016 IPR010432 RDD NHAM_RS13735 a6eaa7e28e6ed134ab91e54720f406c4 389 SUPERFAMILY SSF102114 24 306 1.75E-51 T 22-04-2016 NHAM_RS13735 a6eaa7e28e6ed134ab91e54720f406c4 389 PANTHER PTHR11228:SF22 23 334 2.4E-100 T 22-04-2016 NHAM_RS13735 a6eaa7e28e6ed134ab91e54720f406c4 389 TIGRFAM TIGR03470 HpnH: hopanoid biosynthesis associated radical SAM protein HpnH 1 316 6.4E-172 T 22-04-2016 IPR017833 Hopanoid biosynthesis associated radical SAM protein HpnH NHAM_RS13735 a6eaa7e28e6ed134ab91e54720f406c4 389 Pfam PF11946 Domain of unknown function (DUF3463) 195 326 2.9E-60 T 22-04-2016 IPR022563 Domain of unknown function DUF3463 NHAM_RS13735 a6eaa7e28e6ed134ab91e54720f406c4 389 PANTHER PTHR11228 23 334 2.4E-100 T 22-04-2016 NHAM_RS13735 a6eaa7e28e6ed134ab91e54720f406c4 389 Gene3D G3DSA:3.20.20.70 23 308 4.7E-42 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS13735 a6eaa7e28e6ed134ab91e54720f406c4 389 Pfam PF04055 Radical SAM superfamily 34 186 3.1E-12 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NHAM_RS06895 2b91204c21b2fedb2fbd273f7e6a547a 362 Pfam PF06114 Domain of unknown function (DUF955) 157 267 8.3E-18 T 22-04-2016 IPR010359 HTH domain, IrrE-type NHAM_RS06895 2b91204c21b2fedb2fbd273f7e6a547a 362 PANTHER PTHR10245:SF22 5 271 1.6E-111 T 22-04-2016 NHAM_RS06895 2b91204c21b2fedb2fbd273f7e6a547a 362 PANTHER PTHR10245 5 271 1.6E-111 T 22-04-2016 NHAM_RS06895 2b91204c21b2fedb2fbd273f7e6a547a 362 Gene3D G3DSA:1.10.260.40 4 65 5.1E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS06895 2b91204c21b2fedb2fbd273f7e6a547a 362 Pfam PF01381 Helix-turn-helix 8 58 8.6E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS06895 2b91204c21b2fedb2fbd273f7e6a547a 362 SMART SM00530 7 62 2.7E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS06895 2b91204c21b2fedb2fbd273f7e6a547a 362 SUPERFAMILY SSF47413 3 64 1.05E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS04995 6ea3051b5a314c21eb763363b75a55d1 649 Gene3D G3DSA:3.40.50.300 248 334 7.0E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04995 6ea3051b5a314c21eb763363b75a55d1 649 Gene3D G3DSA:3.40.50.300 80 163 7.0E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04995 6ea3051b5a314c21eb763363b75a55d1 649 Pfam PF06798 PrkA serine protein kinase C-terminal domain 388 641 6.3E-74 T 22-04-2016 IPR010650 PrkA C-terminal domain NHAM_RS04995 6ea3051b5a314c21eb763363b75a55d1 649 PANTHER PTHR30267 2 649 8.3E-238 T 22-04-2016 NHAM_RS04995 6ea3051b5a314c21eb763363b75a55d1 649 SMART SM00763 24 385 1.0E-178 T 22-04-2016 IPR013153 PrkA AAA domain NHAM_RS04995 6ea3051b5a314c21eb763363b75a55d1 649 SUPERFAMILY SSF52540 80 380 7.47E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04995 6ea3051b5a314c21eb763363b75a55d1 649 PANTHER PTHR30267:SF2 2 649 8.3E-238 T 22-04-2016 NHAM_RS04995 6ea3051b5a314c21eb763363b75a55d1 649 PIRSF PIRSF000549 1 649 4.3E-275 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 NHAM_RS04995 6ea3051b5a314c21eb763363b75a55d1 649 Pfam PF08298 PrkA AAA domain 24 384 4.1E-171 T 22-04-2016 IPR013153 PrkA AAA domain NHAM_RS10405 ef31e47d2948656ba23fa804ef61d41e 255 Pfam PF03746 LamB/YcsF family 3 242 9.7E-101 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF NHAM_RS10405 ef31e47d2948656ba23fa804ef61d41e 255 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 246 45.683 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF NHAM_RS10405 ef31e47d2948656ba23fa804ef61d41e 255 PANTHER PTHR30292 1 253 5.8E-128 T 22-04-2016 NHAM_RS10405 ef31e47d2948656ba23fa804ef61d41e 255 SUPERFAMILY SSF88713 1 252 4.39E-100 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NHAM_RS10405 ef31e47d2948656ba23fa804ef61d41e 255 PANTHER PTHR30292:SF0 1 253 5.8E-128 T 22-04-2016 NHAM_RS16170 f27513fde0738df1375361629a167348 175 Pfam PF12276 Protein of unknown function (DUF3617) 9 145 1.3E-8 T 22-04-2016 IPR022061 Protein of unknown function DUF3617 NHAM_RS16275 d2a9a09ad9648579ba77eeb83cd22121 541 PANTHER PTHR30008 424 515 2.6E-147 T 22-04-2016 NHAM_RS16275 d2a9a09ad9648579ba77eeb83cd22121 541 PANTHER PTHR30008 7 372 2.6E-147 T 22-04-2016 NHAM_RS16275 d2a9a09ad9648579ba77eeb83cd22121 541 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 12 503 26.851 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 NHAM_RS16275 d2a9a09ad9648579ba77eeb83cd22121 541 PANTHER PTHR30008:SF0 424 515 2.6E-147 T 22-04-2016 NHAM_RS16275 d2a9a09ad9648579ba77eeb83cd22121 541 PANTHER PTHR30008:SF0 7 372 2.6E-147 T 22-04-2016 NHAM_RS16275 d2a9a09ad9648579ba77eeb83cd22121 541 Pfam PF13742 OB-fold nucleic acid binding domain 15 108 3.0E-26 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 NHAM_RS16275 d2a9a09ad9648579ba77eeb83cd22121 541 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 16 501 1.4E-123 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 NHAM_RS16275 d2a9a09ad9648579ba77eeb83cd22121 541 Pfam PF02601 Exonuclease VII, large subunit 132 500 9.2E-86 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 NHAM_RS11785 15aad2d574c6131b52ff64fcd9932bab 132 Gene3D G3DSA:1.20.120.550 25 129 1.8E-17 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain NHAM_RS11785 15aad2d574c6131b52ff64fcd9932bab 132 Pfam PF01124 MAPEG family 8 129 1.9E-20 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein NHAM_RS11785 15aad2d574c6131b52ff64fcd9932bab 132 SUPERFAMILY SSF161084 3 125 1.57E-25 T 22-04-2016 NHAM_RS10240 b503e0821f7f4ef037ff6b88432eb6b5 396 SMART SM00936 280 370 3.6E-21 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS10240 b503e0821f7f4ef037ff6b88432eb6b5 396 SUPERFAMILY SSF69189 280 371 1.82E-17 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS10240 b503e0821f7f4ef037ff6b88432eb6b5 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 1.7E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NHAM_RS10240 b503e0821f7f4ef037ff6b88432eb6b5 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 1.7E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NHAM_RS10240 b503e0821f7f4ef037ff6b88432eb6b5 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 1.7E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NHAM_RS10240 b503e0821f7f4ef037ff6b88432eb6b5 396 Gene3D G3DSA:3.40.710.10 32 280 4.5E-87 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS10240 b503e0821f7f4ef037ff6b88432eb6b5 396 SUPERFAMILY SSF56601 25 280 1.71E-73 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS10240 b503e0821f7f4ef037ff6b88432eb6b5 396 PANTHER PTHR21581 15 396 4.7E-100 T 22-04-2016 NHAM_RS10240 b503e0821f7f4ef037ff6b88432eb6b5 396 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 256 1.9E-64 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 NHAM_RS10240 b503e0821f7f4ef037ff6b88432eb6b5 396 Gene3D G3DSA:2.60.410.10 281 368 8.0E-14 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS10240 b503e0821f7f4ef037ff6b88432eb6b5 396 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 368 1.5E-13 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS10240 b503e0821f7f4ef037ff6b88432eb6b5 396 PANTHER PTHR21581:SF3 15 396 4.7E-100 T 22-04-2016 NHAM_RS12980 df4adc1c17708be3b4134b61a05447ab 99 SUPERFAMILY SSF51197 12 95 4.94E-28 T 22-04-2016 NHAM_RS12980 df4adc1c17708be3b4134b61a05447ab 99 Gene3D G3DSA:2.60.120.10 12 94 2.0E-26 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS12980 df4adc1c17708be3b4134b61a05447ab 99 Pfam PF09313 Domain of unknown function (DUF1971) 14 88 3.4E-26 T 22-04-2016 IPR015392 Domain of unknown function DUF1971 NHAM_RS20340 6fc3ddd34e43cdbd1a66fd41bc40432b 131 Pfam PF01527 Transposase 43 116 9.5E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NHAM_RS20340 6fc3ddd34e43cdbd1a66fd41bc40432b 131 SUPERFAMILY SSF48295 37 95 7.32E-10 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS20340 6fc3ddd34e43cdbd1a66fd41bc40432b 131 Gene3D G3DSA:1.10.10.10 31 95 7.3E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS20340 6fc3ddd34e43cdbd1a66fd41bc40432b 131 PANTHER PTHR37936 21 126 8.8E-13 T 22-04-2016 NHAM_RS06715 ffe2fff7b9585981fc98a249934097de 256 Gene3D G3DSA:3.40.50.300 5 239 4.0E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06715 ffe2fff7b9585981fc98a249934097de 256 Pfam PF00005 ABC transporter 25 175 7.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS06715 ffe2fff7b9585981fc98a249934097de 256 PANTHER PTHR24220 11 250 1.0E-140 T 22-04-2016 NHAM_RS06715 ffe2fff7b9585981fc98a249934097de 256 PANTHER PTHR24220:SF483 11 250 1.0E-140 T 22-04-2016 NHAM_RS06715 ffe2fff7b9585981fc98a249934097de 256 SUPERFAMILY SSF52540 8 238 4.66E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06715 ffe2fff7b9585981fc98a249934097de 256 SMART SM00382 34 223 2.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS06715 ffe2fff7b9585981fc98a249934097de 256 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS04345 40c572bff5be4e207cdef756e2dac642 117 Pfam PF11994 Protein of unknown function (DUF3489) 48 111 5.1E-26 T 22-04-2016 IPR021880 Protein of unknown function DUF3489 NHAM_RS11270 f73a1cee70a3a3327fcbb9ba85ecaa3a 441 PANTHER PTHR11780:SF10 2 429 1.3E-256 T 22-04-2016 NHAM_RS11270 f73a1cee70a3a3327fcbb9ba85ecaa3a 441 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 333 415 1.9E-29 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 NHAM_RS11270 f73a1cee70a3a3327fcbb9ba85ecaa3a 441 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 344 355 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 NHAM_RS11270 f73a1cee70a3a3327fcbb9ba85ecaa3a 441 SUPERFAMILY SSF140490 327 422 4.32E-36 T 22-04-2016 NHAM_RS11270 f73a1cee70a3a3327fcbb9ba85ecaa3a 441 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 167 182 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 NHAM_RS11270 f73a1cee70a3a3327fcbb9ba85ecaa3a 441 PANTHER PTHR11780 2 429 1.3E-256 T 22-04-2016 NHAM_RS11270 f73a1cee70a3a3327fcbb9ba85ecaa3a 441 SUPERFAMILY SSF142984 241 326 1.83E-25 T 22-04-2016 NHAM_RS11270 f73a1cee70a3a3327fcbb9ba85ecaa3a 441 SMART SM00928 331 376 3.7E-25 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 NHAM_RS11270 f73a1cee70a3a3327fcbb9ba85ecaa3a 441 SUPERFAMILY SSF142019 4 239 6.02E-81 T 22-04-2016 NHAM_RS11270 f73a1cee70a3a3327fcbb9ba85ecaa3a 441 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 217 4.9E-48 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain NHAM_RS11270 f73a1cee70a3a3327fcbb9ba85ecaa3a 441 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 417 1.8E-192 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 NHAM_RS11270 f73a1cee70a3a3327fcbb9ba85ecaa3a 441 Pfam PF10531 SLBB domain 243 292 1.5E-9 T 22-04-2016 IPR019554 Soluble ligand binding domain NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 PANTHER PTHR11624 109 474 2.3E-194 T 22-04-2016 IPR033247 Transketolase family NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 SMART SM00861 152 327 1.6E-59 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 Pfam PF02780 Transketolase, C-terminal domain 342 464 7.2E-42 T 22-04-2016 IPR033248 Transketolase, C-terminal domain NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 Gene3D G3DSA:2.40.50.100 2 97 4.8E-34 T 22-04-2016 NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 SUPERFAMILY SSF52518 151 341 1.47E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 SUPERFAMILY SSF52922 336 471 2.88E-43 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 PANTHER PTHR11624:SF11 109 474 2.3E-194 T 22-04-2016 NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 Gene3D G3DSA:3.40.50.970 149 342 2.4E-93 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 SUPERFAMILY SSF51230 1 97 1.44E-28 T 22-04-2016 IPR011053 Single hybrid motif NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 Gene3D G3DSA:3.40.50.920 343 472 1.5E-47 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 Pfam PF02779 Transketolase, pyrimidine binding domain 152 327 7.8E-50 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NHAM_RS08945 564e503f75548c85026c642e5e51ce57 474 Pfam PF00364 Biotin-requiring enzyme 4 77 6.8E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment NHAM_RS07970 92ba010996867840ae154d203746a9ba 185 PANTHER PTHR11994 3 185 1.5E-89 T 22-04-2016 NHAM_RS07970 92ba010996867840ae154d203746a9ba 185 ProSitePatterns PS00358 Ribosomal protein L5 signature. 63 79 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07970 92ba010996867840ae154d203746a9ba 185 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 7 185 40.762 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07970 92ba010996867840ae154d203746a9ba 185 Pfam PF00281 Ribosomal protein L5 30 86 1.7E-22 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal NHAM_RS07970 92ba010996867840ae154d203746a9ba 185 Pfam PF00673 ribosomal L5P family C-terminus 90 183 2.8E-40 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal NHAM_RS07970 92ba010996867840ae154d203746a9ba 185 Gene3D G3DSA:3.30.1440.10 8 184 2.5E-72 T 22-04-2016 IPR022803 Ribosomal protein L5 domain NHAM_RS07970 92ba010996867840ae154d203746a9ba 185 SUPERFAMILY SSF55282 9 184 1.84E-71 T 22-04-2016 IPR022803 Ribosomal protein L5 domain NHAM_RS07970 92ba010996867840ae154d203746a9ba 185 PIRSF PIRSF002161 4 185 2.6E-63 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 NHAM_RS02570 fcf5e361661b23bd5be40c5cb6942fce 218 Pfam PF09335 SNARE associated Golgi protein 39 162 2.8E-18 T 22-04-2016 IPR032816 SNARE associated Golgi protein NHAM_RS02570 fcf5e361661b23bd5be40c5cb6942fce 218 PANTHER PTHR30353:SF5 1 208 3.2E-53 T 22-04-2016 NHAM_RS02570 fcf5e361661b23bd5be40c5cb6942fce 218 PANTHER PTHR30353 1 208 3.2E-53 T 22-04-2016 IPR032818 DedA family NHAM_RS14185 1008229bab031378ea62b12523f7690c 183 Gene3D G3DSA:2.60.120.10 1 178 2.3E-66 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS14185 1008229bab031378ea62b12523f7690c 183 PANTHER PTHR21047 8 176 1.0E-53 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NHAM_RS14185 1008229bab031378ea62b12523f7690c 183 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 175 2.2E-56 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NHAM_RS14185 1008229bab031378ea62b12523f7690c 183 SUPERFAMILY SSF51182 1 178 8.91E-62 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS14185 1008229bab031378ea62b12523f7690c 183 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 20 176 6.0E-90 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NHAM_RS15520 3a87d2d1a2f70e4b1162283c51cad9b2 667 Pfam PF00005 ABC transporter 440 587 2.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS15520 3a87d2d1a2f70e4b1162283c51cad9b2 667 PANTHER PTHR24222:SF0 105 648 1.7E-232 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 NHAM_RS15520 3a87d2d1a2f70e4b1162283c51cad9b2 667 SUPERFAMILY SSF52540 412 648 5.96E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15520 3a87d2d1a2f70e4b1162283c51cad9b2 667 SMART SM00382 448 644 3.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS15520 3a87d2d1a2f70e4b1162283c51cad9b2 667 SUPERFAMILY SSF90123 104 409 5.89E-49 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS15520 3a87d2d1a2f70e4b1162283c51cad9b2 667 Gene3D G3DSA:3.40.50.300 422 648 7.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15520 3a87d2d1a2f70e4b1162283c51cad9b2 667 Gene3D G3DSA:1.20.1560.10 104 412 1.9E-44 T 22-04-2016 NHAM_RS15520 3a87d2d1a2f70e4b1162283c51cad9b2 667 ProSitePatterns PS00211 ABC transporters family signature. 560 574 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS15520 3a87d2d1a2f70e4b1162283c51cad9b2 667 PANTHER PTHR24222 105 648 1.7E-232 T 22-04-2016 NHAM_RS15520 3a87d2d1a2f70e4b1162283c51cad9b2 667 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 105 649 3.5E-218 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 NHAM_RS15520 3a87d2d1a2f70e4b1162283c51cad9b2 667 Pfam PF00664 ABC transporter transmembrane region 117 371 8.2E-20 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 SUPERFAMILY SSF53738 2 182 3.02E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 SUPERFAMILY SSF53738 157 258 9.81E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 Gene3D G3DSA:3.40.120.10 252 361 1.3E-36 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 PANTHER PTHR22573:SF15 2 442 1.2E-164 T 22-04-2016 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 441 4.2E-187 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 SUPERFAMILY SSF55957 360 442 3.01E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 SUPERFAMILY SSF53738 259 367 3.57E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 Gene3D G3DSA:3.30.310.50 362 442 6.2E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 Gene3D G3DSA:3.40.120.10 3 140 4.9E-45 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 8.6E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 8.6E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 8.6E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 Gene3D G3DSA:3.40.120.10 177 251 6.4E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 445 46.459 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 385 440 3.9E-12 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 8.4E-21 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 135 2.6E-42 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 367 2.4E-33 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS05685 9480706469adc6861e673c7bb37b9ad3 448 PANTHER PTHR22573 2 442 1.2E-164 T 22-04-2016 NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 Pfam PF00107 Zinc-binding dehydrogenase 197 322 7.6E-16 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 SUPERFAMILY SSF50129 325 375 6.12E-13 T 22-04-2016 IPR011032 GroES-like NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 152 3.4E-23 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 PANTHER PTHR11695 128 375 7.1E-189 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 PANTHER PTHR11695 15 108 7.1E-189 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 Gene3D G3DSA:3.40.50.720 191 315 3.4E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 SUPERFAMILY SSF50129 1 183 7.3E-68 T 22-04-2016 IPR011032 GroES-like NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 PANTHER PTHR11695:SF560 128 375 7.1E-189 T 22-04-2016 NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 PANTHER PTHR11695:SF560 15 108 7.1E-189 T 22-04-2016 NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 375 2.1E-181 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 SUPERFAMILY SSF51735 160 340 5.05E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11045 5aeb4dc838e8dfd0b5c54ac5b45def56 375 Gene3D G3DSA:3.90.180.10 2 190 3.5E-61 T 22-04-2016 IPR011032 GroES-like NHAM_RS05525 17d17a47d5743e57e856ab47d96eccfd 504 PANTHER PTHR33908 21 399 7.1E-18 T 22-04-2016 NHAM_RS05525 17d17a47d5743e57e856ab47d96eccfd 504 PANTHER PTHR33908:SF3 21 399 7.1E-18 T 22-04-2016 NHAM_RS05525 17d17a47d5743e57e856ab47d96eccfd 504 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 93 235 3.5E-17 T 22-04-2016 NHAM_RS01170 46138efe79b3a287edf40a2b4a8b4f20 184 Pfam PF00072 Response regulator receiver domain 16 124 9.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS01170 46138efe79b3a287edf40a2b4a8b4f20 184 Gene3D G3DSA:3.40.50.2300 14 132 1.3E-27 T 22-04-2016 NHAM_RS01170 46138efe79b3a287edf40a2b4a8b4f20 184 PANTHER PTHR26402 13 124 1.4E-60 T 22-04-2016 NHAM_RS01170 46138efe79b3a287edf40a2b4a8b4f20 184 SUPERFAMILY SSF52172 13 170 8.4E-31 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS01170 46138efe79b3a287edf40a2b4a8b4f20 184 PANTHER PTHR26402:SF344 13 124 1.4E-60 T 22-04-2016 NHAM_RS01170 46138efe79b3a287edf40a2b4a8b4f20 184 Pfam PF02954 Bacterial regulatory protein, Fis family 154 176 1.6E-4 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NHAM_RS01170 46138efe79b3a287edf40a2b4a8b4f20 184 SMART SM00448 13 124 1.3E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS01170 46138efe79b3a287edf40a2b4a8b4f20 184 Gene3D G3DSA:1.10.10.60 133 182 2.0E-29 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS06215 c6fb3470360c4cbcd29eff70e5c753d1 224 SUPERFAMILY SSF48452 100 213 1.1E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS06215 c6fb3470360c4cbcd29eff70e5c753d1 224 PANTHER PTHR23083 91 208 9.5E-15 T 22-04-2016 NHAM_RS06215 c6fb3470360c4cbcd29eff70e5c753d1 224 SMART SM00028 138 171 0.008 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS06215 c6fb3470360c4cbcd29eff70e5c753d1 224 SMART SM00028 172 205 0.23 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS06215 c6fb3470360c4cbcd29eff70e5c753d1 224 Gene3D G3DSA:1.25.40.10 105 210 4.0E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS17790 1f01c47beec2b41fcfa6760516b621ff 355 SUPERFAMILY SSF90002 261 354 3.01E-27 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NHAM_RS17790 1f01c47beec2b41fcfa6760516b621ff 355 Gene3D G3DSA:3.40.50.300 3 201 2.0E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17790 1f01c47beec2b41fcfa6760516b621ff 355 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 260 354 3.8E-24 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NHAM_RS17790 1f01c47beec2b41fcfa6760516b621ff 355 Gene3D G3DSA:3.30.1220.10 238 355 6.9E-44 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NHAM_RS17790 1f01c47beec2b41fcfa6760516b621ff 355 PANTHER PTHR13748 1 208 3.3E-154 T 22-04-2016 NHAM_RS17790 1f01c47beec2b41fcfa6760516b621ff 355 PANTHER PTHR13748 224 355 3.3E-154 T 22-04-2016 NHAM_RS17790 1f01c47beec2b41fcfa6760516b621ff 355 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 181 8.2E-60 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NHAM_RS17790 1f01c47beec2b41fcfa6760516b621ff 355 SMART SM00833 260 354 1.1E-15 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NHAM_RS17790 1f01c47beec2b41fcfa6760516b621ff 355 SUPERFAMILY SSF52540 4 214 8.78E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17790 1f01c47beec2b41fcfa6760516b621ff 355 PANTHER PTHR13748:SF43 1 208 3.3E-154 T 22-04-2016 NHAM_RS17790 1f01c47beec2b41fcfa6760516b621ff 355 PANTHER PTHR13748:SF43 224 355 3.3E-154 T 22-04-2016 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PRINTS PR00385 P450 superfamily signature 237 254 4.4E-6 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PRINTS PR00385 P450 superfamily signature 272 283 4.4E-6 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PRINTS PR00385 P450 superfamily signature 346 357 4.4E-6 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PRINTS PR00385 P450 superfamily signature 337 346 4.4E-6 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PANTHER PTHR24286:SF48 85 395 1.6E-111 T 22-04-2016 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PANTHER PTHR24286 85 395 1.6E-111 T 22-04-2016 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 Gene3D G3DSA:1.10.630.10 8 394 4.5E-108 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 SUPERFAMILY SSF48264 10 394 5.63E-93 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 339 348 - T 22-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 Pfam PF00067 Cytochrome P450 179 366 9.2E-25 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PRINTS PR00359 B-class P450 signature 190 212 6.7E-35 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PRINTS PR00359 B-class P450 signature 288 315 6.7E-35 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PRINTS PR00359 B-class P450 signature 89 100 6.7E-35 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PRINTS PR00359 B-class P450 signature 337 346 6.7E-35 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PRINTS PR00359 B-class P450 signature 346 357 6.7E-35 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PRINTS PR00359 B-class P450 signature 135 151 6.7E-35 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PRINTS PR00359 B-class P450 signature 316 331 6.7E-35 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NHAM_RS13800 e1380db1e777877de567c4921248cb48 398 PRINTS PR00359 B-class P450 signature 152 167 6.7E-35 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NHAM_RS01820 8c1aac5844575e26168270db166f9e92 465 SUPERFAMILY SSF141322 393 453 2.22E-9 T 22-04-2016 NHAM_RS01820 8c1aac5844575e26168270db166f9e92 465 PANTHER PTHR33507 158 456 1.0E-145 T 22-04-2016 NHAM_RS01820 8c1aac5844575e26168270db166f9e92 465 PANTHER PTHR33507 2 141 1.0E-145 T 22-04-2016 NHAM_RS01820 8c1aac5844575e26168270db166f9e92 465 Gene3D G3DSA:2.40.50.140 397 453 1.4E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS01820 8c1aac5844575e26168270db166f9e92 465 SUPERFAMILY SSF52096 33 216 4.57E-27 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS01820 8c1aac5844575e26168270db166f9e92 465 Pfam PF01957 NfeD-like C-terminal, partner-binding 319 453 2.2E-30 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain NHAM_RS01820 8c1aac5844575e26168270db166f9e92 465 PANTHER PTHR33507:SF1 2 141 1.0E-145 T 22-04-2016 NHAM_RS01820 8c1aac5844575e26168270db166f9e92 465 PANTHER PTHR33507:SF1 158 456 1.0E-145 T 22-04-2016 NHAM_RS01820 8c1aac5844575e26168270db166f9e92 465 Gene3D G3DSA:3.90.226.10 192 226 2.6E-19 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS01820 8c1aac5844575e26168270db166f9e92 465 Gene3D G3DSA:3.90.226.10 27 133 2.6E-19 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS11535 e8fe10c0cbe2b1d2f4801014f943daa0 88 Pfam PF12071 Protein of unknown function (DUF3551) 3 75 2.9E-25 T 22-04-2016 IPR021937 Protein of unknown function DUF3551 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 Gene3D G3DSA:3.30.70.1430 39 140 2.3E-28 T 22-04-2016 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 PANTHER PTHR32063 1 1031 0.0 T 22-04-2016 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 Gene3D G3DSA:3.30.70.1430 565 668 1.6E-28 T 22-04-2016 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1028 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 Pfam PF00873 AcrB/AcrD/AcrF family 3 1023 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 Gene3D G3DSA:1.10.3850.10 281 502 1.1E-56 T 22-04-2016 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 Gene3D G3DSA:1.10.3850.10 811 1025 2.5E-48 T 22-04-2016 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 Gene3D G3DSA:3.30.2090.10 183 276 8.8E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 Gene3D G3DSA:3.30.2090.10 720 808 8.2E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 2.3E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.3E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 2.3E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.3E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.3E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 2.3E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.3E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 2.3E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.3E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 SUPERFAMILY SSF82693 276 332 3.31E-25 T 22-04-2016 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 SUPERFAMILY SSF82866 298 501 3.27E-46 T 22-04-2016 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 SUPERFAMILY SSF82693 39 133 9.68E-23 T 22-04-2016 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 SUPERFAMILY SSF82714 184 274 1.03E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 PANTHER PTHR32063:SF27 1 1031 0.0 T 22-04-2016 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 SUPERFAMILY SSF82866 805 1028 4.71E-40 T 22-04-2016 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 SUPERFAMILY SSF82693 137 183 3.31E-25 T 22-04-2016 NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 SUPERFAMILY SSF82714 720 804 2.22E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS05075 0f55dffbf8600777c3f5e2ce592828e0 1048 SUPERFAMILY SSF82693 563 669 1.26E-25 T 22-04-2016 NHAM_RS02980 96dcc448e72fa430ad5e449c3e897fc2 224 PIRSF PIRSF009320 1 217 4.0E-47 T 22-04-2016 NHAM_RS02980 96dcc448e72fa430ad5e449c3e897fc2 224 SUPERFAMILY SSF52540 1 207 2.08E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02980 96dcc448e72fa430ad5e449c3e897fc2 224 PANTHER PTHR13696 1 215 1.3E-39 T 22-04-2016 NHAM_RS02980 96dcc448e72fa430ad5e449c3e897fc2 224 PANTHER PTHR13696:SF54 1 215 1.3E-39 T 22-04-2016 NHAM_RS02980 96dcc448e72fa430ad5e449c3e897fc2 224 Gene3D G3DSA:3.40.50.300 1 206 1.9E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02980 96dcc448e72fa430ad5e449c3e897fc2 224 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 145 1.6E-21 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NHAM_RS07250 67c1b9958b5e8688b7c25bb2e9971306 135 PRINTS PR01996 Phage major tail protein 1 family signature 49 78 6.5E-50 T 22-04-2016 IPR022344 Gene transfer agent, major tail protein NHAM_RS07250 67c1b9958b5e8688b7c25bb2e9971306 135 PRINTS PR01996 Phage major tail protein 1 family signature 108 132 6.5E-50 T 22-04-2016 IPR022344 Gene transfer agent, major tail protein NHAM_RS07250 67c1b9958b5e8688b7c25bb2e9971306 135 PRINTS PR01996 Phage major tail protein 1 family signature 81 104 6.5E-50 T 22-04-2016 IPR022344 Gene transfer agent, major tail protein NHAM_RS07250 67c1b9958b5e8688b7c25bb2e9971306 135 PRINTS PR01996 Phage major tail protein 1 family signature 1 13 6.5E-50 T 22-04-2016 IPR022344 Gene transfer agent, major tail protein NHAM_RS07250 67c1b9958b5e8688b7c25bb2e9971306 135 TIGRFAM TIGR02126 phgtail_TP901_1: phage major tail protein, TP901-1 family 1 128 6.7E-37 T 22-04-2016 IPR011855 Phage major tail protein TP901-1 NHAM_RS07250 67c1b9958b5e8688b7c25bb2e9971306 135 Pfam PF06199 Phage tail tube protein 3 132 1.5E-45 T 22-04-2016 IPR011855 Phage major tail protein TP901-1 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 SUPERFAMILY SSF75615 115 209 8.37E-28 T 22-04-2016 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 PIRSF PIRSF036426 1 473 1.2E-162 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 Gene3D G3DSA:3.30.950.10 340 470 5.9E-32 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 225 435 2.3E-48 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 SUPERFAMILY SSF53790 221 473 1.01E-69 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 229 243 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 Pfam PF13241 Putative NAD(P)-binding 6 116 1.2E-8 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 PANTHER PTHR21091 6 24 1.2E-61 T 22-04-2016 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 PANTHER PTHR21091 192 435 1.2E-61 T 22-04-2016 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 3.1E-6 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 Gene3D G3DSA:3.40.1010.10 223 339 3.8E-43 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 Gene3D G3DSA:3.40.50.720 1 113 3.6E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 PANTHER PTHR21091:SF16 6 24 1.2E-61 T 22-04-2016 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 PANTHER PTHR21091:SF16 192 435 1.2E-61 T 22-04-2016 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 Pfam PF10414 Sirohaem synthase dimerisation region 152 206 2.3E-21 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 205 9.1E-50 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 Gene3D G3DSA:1.10.8.210 151 207 5.9E-19 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 Gene3D G3DSA:3.30.160.110 114 149 1.9E-18 T 22-04-2016 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 224 457 1.3E-81 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 NHAM_RS18275 573dd5fe95c147017f064d5056749ce9 478 SUPERFAMILY SSF51735 1 113 9.05E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS03825 e706ae33bb1da63d28263ad93d9f344a 154 Gene3D G3DSA:3.30.700.10 9 54 3.6E-6 T 22-04-2016 NHAM_RS03825 e706ae33bb1da63d28263ad93d9f344a 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 25 6.9E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site NHAM_RS03825 e706ae33bb1da63d28263ad93d9f344a 154 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 5 141 6.4E-13 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 NHAM_RS03825 e706ae33bb1da63d28263ad93d9f344a 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 7.9E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site NHAM_RS03825 e706ae33bb1da63d28263ad93d9f344a 154 SUPERFAMILY SSF54523 9 85 7.53E-13 T 22-04-2016 NHAM_RS13545 dbb85e6e474e5582cb26b26f5e12be79 220 Gene3D G3DSA:3.40.630.20 5 210 4.7E-40 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like NHAM_RS13545 dbb85e6e474e5582cb26b26f5e12be79 220 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 137 153 5.1E-14 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 NHAM_RS13545 dbb85e6e474e5582cb26b26f5e12be79 220 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 7 30 5.1E-14 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 NHAM_RS13545 dbb85e6e474e5582cb26b26f5e12be79 220 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 68 80 5.1E-14 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 NHAM_RS13545 dbb85e6e474e5582cb26b26f5e12be79 220 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 167 179 5.1E-14 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 NHAM_RS13545 dbb85e6e474e5582cb26b26f5e12be79 220 PIRSF PIRSF015592 4 216 5.2E-42 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 NHAM_RS13545 dbb85e6e474e5582cb26b26f5e12be79 220 Pfam PF01470 Pyroglutamyl peptidase 6 177 9.3E-20 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like NHAM_RS13545 dbb85e6e474e5582cb26b26f5e12be79 220 PANTHER PTHR23402 5 218 2.3E-39 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like NHAM_RS13545 dbb85e6e474e5582cb26b26f5e12be79 220 SUPERFAMILY SSF53182 5 213 1.83E-50 T 22-04-2016 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 SUPERFAMILY SSF81442 20 536 1.2E-213 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 27 536 2.1E-216 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 441 462 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 100 124 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 258 279 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 207 226 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 328 349 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 24 49 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 178 196 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 363 381 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 147 159 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 72 95 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 391 410 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 304 319 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 33 483 5.3E-156 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PANTHER PTHR10422 10 537 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 Gene3D G3DSA:1.20.210.10 36 504 6.7E-228 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 260 314 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17760 67b1fe3398df0c7b8ee6babaabd5a474 537 PANTHER PTHR10422:SF27 10 537 0.0 T 22-04-2016 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 SUPERFAMILY SSF81442 20 536 1.2E-213 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 27 536 2.1E-216 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 441 462 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 100 124 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 258 279 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 207 226 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 328 349 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 24 49 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 178 196 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 363 381 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 147 159 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 72 95 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 391 410 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 304 319 2.3E-141 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 33 483 5.3E-156 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PANTHER PTHR10422 10 537 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 Gene3D G3DSA:1.20.210.10 36 504 6.7E-228 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 260 314 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS01290 67b1fe3398df0c7b8ee6babaabd5a474 537 PANTHER PTHR10422:SF27 10 537 0.0 T 22-04-2016 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 SMART SM00387 447 568 5.6E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 512 3.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 498 3.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 536 3.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 SMART SM00304 277 332 2.5E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 SUPERFAMILY SSF55874 388 566 5.11E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 PANTHER PTHR24423 112 182 7.7E-63 T 22-04-2016 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 Gene3D G3DSA:1.10.287.130 325 383 7.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 Pfam PF13755 Sensor N-terminal transmembrane domain 9 82 3.3E-31 T 22-04-2016 IPR025908 Sensor N-terminal transmembrane domain NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 PANTHER PTHR24423:SF379 271 566 7.7E-63 T 22-04-2016 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 PANTHER PTHR24423:SF379 112 182 7.7E-63 T 22-04-2016 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 448 566 3.5E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 Gene3D G3DSA:3.30.565.10 384 566 8.5E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 Pfam PF00512 His Kinase A (phospho-acceptor) domain 335 397 1.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 SMART SM00388 333 398 2.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 Pfam PF00672 HAMP domain 260 328 4.9E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 Pfam PF13756 Stimulus-sensing domain 107 216 1.6E-38 T 22-04-2016 IPR025919 Stimulus-sensing domain NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 PANTHER PTHR24423 271 566 7.7E-63 T 22-04-2016 NHAM_RS02300 e9326e9e6d88000981718bc6c2831f84 569 SUPERFAMILY SSF47384 316 397 1.16E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS06945 8d7c229813d14bd45f1d91431ce480a0 259 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 1.1E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NHAM_RS06945 8d7c229813d14bd45f1d91431ce480a0 259 PANTHER PTHR37844 1 259 3.7E-29 T 22-04-2016 NHAM_RS06945 8d7c229813d14bd45f1d91431ce480a0 259 SUPERFAMILY SSF56300 148 231 6.08E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS06945 8d7c229813d14bd45f1d91431ce480a0 259 SUPERFAMILY SSF56300 1 113 6.08E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS06945 8d7c229813d14bd45f1d91431ce480a0 259 Gene3D G3DSA:3.60.21.10 1 78 4.4E-15 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS06945 8d7c229813d14bd45f1d91431ce480a0 259 Gene3D G3DSA:3.60.21.10 125 230 4.4E-15 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS08810 6c9d13cd7a2886831774e25e0bb97725 111 Pfam PF05521 Phage head-tail joining protein 8 106 4.6E-18 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor NHAM_RS08810 6c9d13cd7a2886831774e25e0bb97725 111 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 7 107 1.4E-10 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 SMART SM00898 2 129 4.1E-57 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 SUPERFAMILY SSF57716 239 293 1.34E-14 T 22-04-2016 NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 145 240 5.7E-23 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 Gene3D G3DSA:3.20.190.10 2 145 2.9E-38 T 22-04-2016 NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 Gene3D G3DSA:1.10.8.50 146 293 9.4E-48 T 22-04-2016 NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 PANTHER PTHR22993 1 293 8.0E-116 T 22-04-2016 NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 SMART SM01232 145 243 1.9E-45 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 292 1.5E-80 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 PANTHER PTHR22993:SF15 1 293 8.0E-116 T 22-04-2016 NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 128 4.5E-35 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 SUPERFAMILY SSF46946 145 239 8.68E-29 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 Pfam PF06827 Zinc finger found in FPG and IleRS 263 293 7.8E-9 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 293 41.705 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 NHAM_RS00235 ac646fbc047e3ac7b220aab6da3bda5c 293 SUPERFAMILY SSF81624 2 154 5.76E-37 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Gene3D G3DSA:3.40.50.140 1 135 4.2E-42 T 22-04-2016 IPR006171 Toprim domain NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 637 1.3E-15 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 3 636 1.1E-235 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 298 307 2.8E-32 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 376 392 2.8E-32 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 164 182 2.8E-32 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 483 497 2.8E-32 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 2.8E-32 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 SUPERFAMILY SSF57783 602 638 2.21E-9 T 22-04-2016 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Gene3D G3DSA:3.30.65.10 603 638 1.3E-11 T 22-04-2016 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 SUPERFAMILY SSF56712 1 571 4.71E-185 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 SUPERFAMILY SSF56712 602 610 4.71E-185 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 SMART SM00437 248 520 1.3E-112 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 PANTHER PTHR11390 1 704 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Gene3D G3DSA:1.10.460.10 460 572 5.6E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Gene3D G3DSA:1.10.460.10 136 187 5.6E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 PANTHER PTHR11390:SF27 1 704 0.0 T 22-04-2016 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Gene3D G3DSA:2.70.20.10 188 320 6.3E-31 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Gene3D G3DSA:2.70.20.10 323 459 7.8E-42 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 SMART SM00493 1 101 2.0E-26 T 22-04-2016 IPR006171 Toprim domain NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Pfam PF01751 Toprim domain 3 115 3.1E-26 T 22-04-2016 IPR006171 Toprim domain NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 SMART SM00436 106 194 4.1E-42 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Pfam PF01131 DNA topoisomerase 130 558 3.3E-123 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 728 52.892 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 285 307 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Pfam PF13368 Topoisomerase C-terminal repeat 652 714 8.7E-14 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Pfam PF13368 Topoisomerase C-terminal repeat 784 837 1.2E-13 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat NHAM_RS12440 f77720e32d9a20c1e01f75ab5a7cf34a 911 Pfam PF13368 Topoisomerase C-terminal repeat 716 768 8.0E-21 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat NHAM_RS11600 09b5d45901e24e870f257349ac43108d 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 5.2E-29 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 NHAM_RS11600 09b5d45901e24e870f257349ac43108d 95 SUPERFAMILY SSF141000 3 93 1.83E-28 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 NHAM_RS11600 09b5d45901e24e870f257349ac43108d 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 1.7E-19 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 NHAM_RS11600 09b5d45901e24e870f257349ac43108d 95 PANTHER PTHR15004:SF0 1 95 2.2E-31 T 22-04-2016 NHAM_RS11600 09b5d45901e24e870f257349ac43108d 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 23.726 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 NHAM_RS11600 09b5d45901e24e870f257349ac43108d 95 PANTHER PTHR15004 1 95 2.2E-31 T 22-04-2016 NHAM_RS09475 ee734a6e6452d8c3ef6c53f9cdef9cfe 471 PANTHER PTHR30097:SF3 45 470 7.7E-130 T 22-04-2016 NHAM_RS09475 ee734a6e6452d8c3ef6c53f9cdef9cfe 471 SUPERFAMILY SSF111369 199 385 1.7E-14 T 22-04-2016 NHAM_RS09475 ee734a6e6452d8c3ef6c53f9cdef9cfe 471 Gene3D G3DSA:2.40.50.100 197 215 1.1E-6 T 22-04-2016 NHAM_RS09475 ee734a6e6452d8c3ef6c53f9cdef9cfe 471 Gene3D G3DSA:2.40.50.100 267 303 1.1E-6 T 22-04-2016 NHAM_RS09475 ee734a6e6452d8c3ef6c53f9cdef9cfe 471 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 167 378 8.5E-71 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS09475 ee734a6e6452d8c3ef6c53f9cdef9cfe 471 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 276 451 3.1E-36 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS09475 ee734a6e6452d8c3ef6c53f9cdef9cfe 471 PANTHER PTHR30097 45 470 7.7E-130 T 22-04-2016 NHAM_RS09475 ee734a6e6452d8c3ef6c53f9cdef9cfe 471 Pfam PF00529 HlyD membrane-fusion protein of T1SS 190 444 3.4E-11 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS13335 45a45015b4d00a10ce998982b2ce399f 268 Gene3D G3DSA:3.30.43.10 1 51 4.8E-20 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NHAM_RS13335 45a45015b4d00a10ce998982b2ce399f 268 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 167 1.0E-46 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 NHAM_RS13335 45a45015b4d00a10ce998982b2ce399f 268 Gene3D G3DSA:3.30.465.10 57 166 7.5E-32 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NHAM_RS13335 45a45015b4d00a10ce998982b2ce399f 268 SUPERFAMILY SSF55447 169 264 7.85E-18 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NHAM_RS13335 45a45015b4d00a10ce998982b2ce399f 268 SUPERFAMILY SSF56176 1 167 1.13E-49 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NHAM_RS13335 45a45015b4d00a10ce998982b2ce399f 268 Gene3D G3DSA:3.30.390.50 171 264 6.0E-16 T 22-04-2016 NHAM_RS13335 45a45015b4d00a10ce998982b2ce399f 268 PANTHER PTHR11908 3 264 6.0E-72 T 22-04-2016 NHAM_RS13335 45a45015b4d00a10ce998982b2ce399f 268 PANTHER PTHR11908:SF68 3 264 6.0E-72 T 22-04-2016 NHAM_RS13335 45a45015b4d00a10ce998982b2ce399f 268 SMART SM01092 171 264 1.6E-15 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NHAM_RS02600 dc70d5be04e782f806e0d193d03e5196 97 Pfam PF00830 Ribosomal L28 family 3 61 3.2E-23 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 NHAM_RS02600 dc70d5be04e782f806e0d193d03e5196 97 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 18.898 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02600 dc70d5be04e782f806e0d193d03e5196 97 PANTHER PTHR13528 1 94 1.2E-32 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 NHAM_RS02600 dc70d5be04e782f806e0d193d03e5196 97 SUPERFAMILY SSF143800 1 82 4.91E-27 T 22-04-2016 NHAM_RS02600 dc70d5be04e782f806e0d193d03e5196 97 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 8.3E-23 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02600 dc70d5be04e782f806e0d193d03e5196 97 Gene3D G3DSA:2.30.170.40 2 77 7.0E-31 T 22-04-2016 NHAM_RS15955 58f522ebaac38df0b1df8c2d79411051 512 Pfam PF00171 Aldehyde dehydrogenase family 34 489 1.2E-125 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS15955 58f522ebaac38df0b1df8c2d79411051 512 Gene3D G3DSA:3.40.309.10 278 457 2.0E-49 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NHAM_RS15955 58f522ebaac38df0b1df8c2d79411051 512 PANTHER PTHR11699:SF144 37 510 1.4E-257 T 22-04-2016 NHAM_RS15955 58f522ebaac38df0b1df8c2d79411051 512 Gene3D G3DSA:3.40.605.10 33 277 8.5E-73 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS15955 58f522ebaac38df0b1df8c2d79411051 512 PANTHER PTHR11699 37 510 1.4E-257 T 22-04-2016 NHAM_RS15955 58f522ebaac38df0b1df8c2d79411051 512 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NHAM_RS15955 58f522ebaac38df0b1df8c2d79411051 512 SUPERFAMILY SSF53720 30 496 8.25E-128 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NHAM_RS04560 b68589620e9c6724b6f13f44fdbbb0d4 264 Gene3D G3DSA:2.50.20.10 37 125 6.3E-5 T 22-04-2016 NHAM_RS04560 b68589620e9c6724b6f13f44fdbbb0d4 264 PIRSF PIRSF012443 1 258 1.2E-76 T 22-04-2016 IPR019207 Protein of unknown function DUF2092, periplasmic NHAM_RS04560 b68589620e9c6724b6f13f44fdbbb0d4 264 SUPERFAMILY SSF89392 36 244 1.06E-26 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX NHAM_RS04560 b68589620e9c6724b6f13f44fdbbb0d4 264 Pfam PF09865 Predicted periplasmic protein (DUF2092) 33 243 1.4E-75 T 22-04-2016 IPR019207 Protein of unknown function DUF2092, periplasmic NHAM_RS16115 daac72ad8c8cc8c8dde27efbdfa76198 348 PANTHER PTHR18895:SF66 18 325 1.6E-112 T 22-04-2016 NHAM_RS16115 daac72ad8c8cc8c8dde27efbdfa76198 348 PANTHER PTHR18895 18 325 1.6E-112 T 22-04-2016 NHAM_RS16115 daac72ad8c8cc8c8dde27efbdfa76198 348 SUPERFAMILY SSF53335 47 303 5.43E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS16115 daac72ad8c8cc8c8dde27efbdfa76198 348 Pfam PF05175 Methyltransferase small domain 170 252 8.9E-18 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 NHAM_RS16115 daac72ad8c8cc8c8dde27efbdfa76198 348 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 46 322 4.6E-59 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 NHAM_RS16115 daac72ad8c8cc8c8dde27efbdfa76198 348 Gene3D G3DSA:1.10.8.10 46 137 1.6E-4 T 22-04-2016 NHAM_RS16115 daac72ad8c8cc8c8dde27efbdfa76198 348 Gene3D G3DSA:3.40.50.150 140 312 8.8E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS16115 daac72ad8c8cc8c8dde27efbdfa76198 348 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NHAM_RS16115 daac72ad8c8cc8c8dde27efbdfa76198 348 PIRSF PIRSF037167 31 342 3.7E-99 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 NHAM_RS16115 daac72ad8c8cc8c8dde27efbdfa76198 348 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 44 331 3.9E-112 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 NHAM_RS07115 2eb56ac6a5d8991662ff317630139e36 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 103 15.714 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 NHAM_RS07115 2eb56ac6a5d8991662ff317630139e36 103 PANTHER PTHR34653 1 103 1.9E-22 T 22-04-2016 NHAM_RS07115 2eb56ac6a5d8991662ff317630139e36 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 34 50 9.2E-5 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 NHAM_RS07115 2eb56ac6a5d8991662ff317630139e36 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 9.2E-5 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 NHAM_RS07115 2eb56ac6a5d8991662ff317630139e36 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 9.2E-5 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 NHAM_RS07115 2eb56ac6a5d8991662ff317630139e36 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 26 102 3.0E-13 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 NHAM_RS07115 2eb56ac6a5d8991662ff317630139e36 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 21 103 3.6E-22 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 NHAM_RS06525 2392b537af48fa8aaeb85ef39545f3aa 370 Gene3D G3DSA:3.40.50.2000 262 344 1.9E-8 T 22-04-2016 NHAM_RS06525 2392b537af48fa8aaeb85ef39545f3aa 370 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 364 30.691 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS06525 2392b537af48fa8aaeb85ef39545f3aa 370 Gene3D G3DSA:3.40.50.2000 3 201 1.9E-50 T 22-04-2016 NHAM_RS06525 2392b537af48fa8aaeb85ef39545f3aa 370 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 190 355 2.4E-32 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS06525 2392b537af48fa8aaeb85ef39545f3aa 370 PANTHER PTHR21015 6 369 1.3E-91 T 22-04-2016 NHAM_RS06525 2392b537af48fa8aaeb85ef39545f3aa 370 SUPERFAMILY SSF53756 6 365 9.78E-100 T 22-04-2016 NHAM_RS06525 2392b537af48fa8aaeb85ef39545f3aa 370 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2 359 1.8E-77 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS06525 2392b537af48fa8aaeb85ef39545f3aa 370 PANTHER PTHR21015:SF22 6 369 1.3E-91 T 22-04-2016 NHAM_RS06525 2392b537af48fa8aaeb85ef39545f3aa 370 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 7 143 5.8E-28 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS05715 b090fb3bcfbcb33c9c4df1c52d7d0c15 157 SUPERFAMILY SSF55826 5 153 1.31E-42 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NHAM_RS05715 b090fb3bcfbcb33c9c4df1c52d7d0c15 157 PANTHER PTHR30411 5 151 5.4E-51 T 22-04-2016 NHAM_RS05715 b090fb3bcfbcb33c9c4df1c52d7d0c15 157 Pfam PF04073 Aminoacyl-tRNA editing domain 28 145 1.0E-24 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NHAM_RS05715 b090fb3bcfbcb33c9c4df1c52d7d0c15 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 5 154 1.1E-50 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC NHAM_RS05715 b090fb3bcfbcb33c9c4df1c52d7d0c15 157 PIRSF PIRSF006181 1 157 6.4E-46 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC NHAM_RS05715 b090fb3bcfbcb33c9c4df1c52d7d0c15 157 PANTHER PTHR30411:SF0 5 151 5.4E-51 T 22-04-2016 NHAM_RS05715 b090fb3bcfbcb33c9c4df1c52d7d0c15 157 Gene3D G3DSA:3.90.960.10 3 154 4.8E-51 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NHAM_RS04940 fb0673969941490132b72d4e5343c91f 239 SUPERFAMILY SSF52540 9 231 7.27E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04940 fb0673969941490132b72d4e5343c91f 239 PANTHER PTHR24220 10 227 3.7E-87 T 22-04-2016 NHAM_RS04940 fb0673969941490132b72d4e5343c91f 239 Pfam PF00005 ABC transporter 28 177 4.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS04940 fb0673969941490132b72d4e5343c91f 239 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS04940 fb0673969941490132b72d4e5343c91f 239 PANTHER PTHR24220:SF86 10 227 3.7E-87 T 22-04-2016 NHAM_RS04940 fb0673969941490132b72d4e5343c91f 239 SMART SM00382 37 225 1.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS04940 fb0673969941490132b72d4e5343c91f 239 Gene3D G3DSA:3.40.50.300 8 228 1.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 Pfam PF00702 haloacid dehalogenase-like hydrolase 306 537 6.7E-29 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 PANTHER PTHR24093 1 594 0.0 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 PANTHER PTHR24093 632 683 0.0 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 SUPERFAMILY SSF81665 213 304 1.06E-11 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 SUPERFAMILY SSF81665 38 108 1.06E-11 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 SUPERFAMILY SSF56784 420 573 1.98E-36 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 SUPERFAMILY SSF56784 309 328 1.98E-36 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 14 684 4.3E-298 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 15 687 40.347 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 Gene3D G3DSA:2.70.150.10 40 213 1.0E-21 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 312 318 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 PANTHER PTHR24093:SF49 1 594 0.0 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 PANTHER PTHR24093:SF49 632 683 0.0 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 159 173 9.4E-24 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 310 324 9.4E-24 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 523 542 9.4E-24 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 558 9.4E-24 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 448 459 9.4E-24 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 470 480 9.4E-24 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 SUPERFAMILY SSF81653 122 212 7.06E-19 T 22-04-2016 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 Gene3D G3DSA:3.40.50.1000 451 570 1.4E-36 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 77 345 4.2E-28 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 423 610 7.1E-43 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 SUPERFAMILY SSF81660 321 458 1.41E-28 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 Gene3D G3DSA:3.40.1110.10 321 450 8.3E-39 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 Pfam PF00122 E1-E2 ATPase 77 301 9.1E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NHAM_RS15340 547fe3baa15e40f3fc513221d74cc97b 689 ProSitePatterns PS01229 Hypothetical cof family signature 2. 523 545 - T 22-04-2016 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 245 363 7.7E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 SUPERFAMILY SSF55785 16 116 1.55E-8 T 22-04-2016 IPR000014 PAS domain NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 Gene3D G3DSA:3.30.565.10 206 364 3.8E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 Gene3D G3DSA:1.10.287.130 136 193 2.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 Pfam PF00989 PAS fold 15 120 3.1E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 SMART SM00388 139 203 3.6E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 Pfam PF00512 His Kinase A (phospho-acceptor) domain 141 194 1.1E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 Gene3D G3DSA:3.30.450.20 16 118 3.3E-17 T 22-04-2016 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 363 2.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 345 2.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 326 2.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 312 2.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 SUPERFAMILY SSF47384 134 195 8.04E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 SMART SM00387 244 366 1.8E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 PANTHER PTHR24423:SF520 16 278 4.6E-98 T 22-04-2016 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 PANTHER PTHR24423:SF520 298 364 4.6E-98 T 22-04-2016 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 SUPERFAMILY SSF55874 207 363 7.33E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 PANTHER PTHR24423 16 278 4.6E-98 T 22-04-2016 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 PANTHER PTHR24423 298 364 4.6E-98 T 22-04-2016 NHAM_RS09395 efd9e0b9adafa61d0d72906d50a8448a 391 SMART SM00091 13 80 3.8E-4 T 22-04-2016 IPR000014 PAS domain NHAM_RS14060 ecd40b0ffeee299a61a14410437e2d67 535 Pfam PF01593 Flavin containing amine oxidoreductase 15 323 8.9E-14 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 NHAM_RS14060 ecd40b0ffeee299a61a14410437e2d67 535 PANTHER PTHR10668 2 535 3.5E-206 T 22-04-2016 NHAM_RS14060 ecd40b0ffeee299a61a14410437e2d67 535 PANTHER PTHR10668:SF83 2 535 3.5E-206 T 22-04-2016 NHAM_RS14060 ecd40b0ffeee299a61a14410437e2d67 535 SUPERFAMILY SSF51905 383 409 2.43E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14060 ecd40b0ffeee299a61a14410437e2d67 535 SUPERFAMILY SSF51905 3 342 2.43E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14060 ecd40b0ffeee299a61a14410437e2d67 535 Gene3D G3DSA:3.50.50.60 219 322 1.4E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14060 ecd40b0ffeee299a61a14410437e2d67 535 Gene3D G3DSA:3.50.50.60 145 146 1.4E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14060 ecd40b0ffeee299a61a14410437e2d67 535 Gene3D G3DSA:3.50.50.60 3 56 1.4E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS18675 b1ca1bd295c5f8d2d725a8a93ab56f58 150 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 19 138 4.9E-56 T 22-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 NHAM_RS18675 b1ca1bd295c5f8d2d725a8a93ab56f58 150 PANTHER PTHR30558 19 145 7.5E-63 T 22-04-2016 NHAM_RS18675 b1ca1bd295c5f8d2d725a8a93ab56f58 150 PANTHER PTHR30558:SF9 19 145 7.5E-63 T 22-04-2016 NHAM_RS18675 b1ca1bd295c5f8d2d725a8a93ab56f58 150 Pfam PF02472 Biopolymer transport protein ExbD/TolR 18 135 3.3E-26 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 SUPERFAMILY SSF51735 166 443 1.35E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 Gene3D G3DSA:3.40.50.10750 569 726 6.5E-50 T 22-04-2016 NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 SMART SM00919 166 402 1.4E-132 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 PANTHER PTHR23406 35 425 3.0E-155 T 22-04-2016 NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 Gene3D G3DSA:3.40.50.10380 14 163 9.0E-49 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 SMART SM01274 21 154 2.5E-76 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 SUPERFAMILY SSF53659 431 754 3.82E-87 T 22-04-2016 NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 Pfam PF03949 Malic enzyme, NAD binding domain 168 359 2.5E-20 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 SUPERFAMILY SSF53223 14 164 7.19E-52 T 22-04-2016 NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 Pfam PF01515 Phosphate acetyl/butaryl transferase 431 751 7.3E-94 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 Gene3D G3DSA:3.40.50.720 164 450 1.5E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 PIRSF PIRSF036684 2 759 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 NHAM_RS10730 cc8c08688f0746eae6b2b24e1ac5166d 766 Pfam PF00390 Malic enzyme, N-terminal domain 22 154 2.4E-26 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NHAM_RS09895 47bbda37da79edfc8f53f2744f27a19a 184 Pfam PF01292 Prokaryotic cytochrome b561 15 180 6.4E-22 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NHAM_RS09895 47bbda37da79edfc8f53f2744f27a19a 184 PANTHER PTHR30529:SF3 5 184 8.2E-53 T 22-04-2016 NHAM_RS09895 47bbda37da79edfc8f53f2744f27a19a 184 PANTHER PTHR30529 5 184 8.2E-53 T 22-04-2016 NHAM_RS09895 47bbda37da79edfc8f53f2744f27a19a 184 SUPERFAMILY SSF81342 5 180 1.02E-26 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 Pfam PF11638 DnaA N-terminal domain 7 68 1.6E-18 T 22-04-2016 IPR024633 DnaA N-terminal domain NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 SMART SM00760 383 452 1.8E-41 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 Pfam PF00308 Bacterial dnaA protein 133 356 2.0E-73 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 SMART SM00382 168 294 0.0011 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 384 452 4.3E-31 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 474 28.673 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 SUPERFAMILY SSF52540 132 350 5.55E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 PANTHER PTHR30050 131 475 1.1E-182 T 22-04-2016 NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 PANTHER PTHR30050 4 105 1.1E-182 T 22-04-2016 NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 SUPERFAMILY SSF48295 370 474 7.06E-37 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 ProSitePatterns PS01008 DnaA protein signature. 433 452 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 Gene3D G3DSA:1.10.8.60 302 373 1.8E-20 T 22-04-2016 NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 169 189 4.1E-45 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 265 292 4.1E-45 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 433 452 4.1E-45 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 200 214 4.1E-45 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 232 246 4.1E-45 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 Gene3D G3DSA:3.40.50.300 130 296 4.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 PANTHER PTHR30050:SF2 131 475 1.1E-182 T 22-04-2016 NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 PANTHER PTHR30050:SF2 4 105 1.1E-182 T 22-04-2016 NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 Gene3D G3DSA:1.10.1750.10 374 475 1.2E-40 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 NHAM_RS00005 496d41fd28ba7b6b62a10509c1247ecf 475 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 473 3.8E-147 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 NHAM_RS09985 b9607649b77069acafe55d84971e2586 343 Pfam PF01548 Transposase 7 146 8.4E-13 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS09985 b9607649b77069acafe55d84971e2586 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 214 289 2.0E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS09985 b9607649b77069acafe55d84971e2586 343 PANTHER PTHR33055 3 339 1.9E-117 T 22-04-2016 NHAM_RS09985 b9607649b77069acafe55d84971e2586 343 PANTHER PTHR33055:SF2 3 339 1.9E-117 T 22-04-2016 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 PIRSF PIRSF000381 7 1210 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 SUPERFAMILY SSF51717 360 634 6.15E-88 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 TIGRFAM TIGR02082 metH: methionine synthase 18 1207 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 SUPERFAMILY SSF56507 914 1241 1.44E-136 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 SUPERFAMILY SSF82282 12 403 4.58E-113 T 22-04-2016 IPR003726 Homocysteine-binding domain NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 Pfam PF02574 Homocysteine S-methyltransferase 22 329 1.3E-88 T 22-04-2016 IPR003726 Homocysteine-binding domain NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 Pfam PF02310 B12 binding domain 760 849 2.0E-19 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 Gene3D G3DSA:3.10.196.10 971 1244 7.6E-114 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 PANTHER PTHR21091 1 402 1.1E-158 T 22-04-2016 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 SUPERFAMILY SSF47644 654 741 8.24E-28 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 Pfam PF00809 Pterin binding enzyme 364 602 7.3E-56 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 Gene3D G3DSA:3.20.20.330 10 367 3.5E-122 T 22-04-2016 IPR003726 Homocysteine-binding domain NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 952 1223 4.5E-126 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 SMART SM01018 659 742 1.9E-43 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 Gene3D G3DSA:3.20.20.20 368 640 3.1E-112 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 Gene3D G3DSA:3.40.50.280 757 907 2.5E-61 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 Gene3D G3DSA:1.10.1240.10 652 739 3.8E-38 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 PANTHER PTHR21091:SF112 1 402 1.1E-158 T 22-04-2016 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 SUPERFAMILY SSF52242 755 907 1.23E-43 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NHAM_RS01895 6b1af6379424aebf6377cc3247b92da7 1288 Pfam PF02607 B12 binding domain 661 734 2.1E-23 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NHAM_RS04705 e554f600f1a889a8e65e1027e02a4f93 158 Gene3D G3DSA:1.20.1260.10 8 156 4.7E-54 T 22-04-2016 IPR012347 Ferritin-related NHAM_RS04705 e554f600f1a889a8e65e1027e02a4f93 158 PANTHER PTHR30295:SF6 8 156 2.1E-53 T 22-04-2016 NHAM_RS04705 e554f600f1a889a8e65e1027e02a4f93 158 PIRSF PIRSF005900 3 158 6.1E-42 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NHAM_RS04705 e554f600f1a889a8e65e1027e02a4f93 158 Pfam PF00210 Ferritin-like domain 17 156 1.1E-28 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 NHAM_RS04705 e554f600f1a889a8e65e1027e02a4f93 158 ProSitePatterns PS00819 Dps protein family signature 2. 63 77 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 NHAM_RS04705 e554f600f1a889a8e65e1027e02a4f93 158 SUPERFAMILY SSF47240 9 155 1.87E-41 T 22-04-2016 IPR009078 Ferritin-like superfamily NHAM_RS04705 e554f600f1a889a8e65e1027e02a4f93 158 PANTHER PTHR30295 8 156 2.1E-53 T 22-04-2016 NHAM_RS04705 e554f600f1a889a8e65e1027e02a4f93 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 37 53 1.9E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NHAM_RS04705 e554f600f1a889a8e65e1027e02a4f93 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 1.9E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NHAM_RS04705 e554f600f1a889a8e65e1027e02a4f93 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 132 150 1.9E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NHAM_RS10545 84cb19c2f48f441582dbbc1d4c421e09 398 SUPERFAMILY SSF53383 50 393 1.02E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS10545 84cb19c2f48f441582dbbc1d4c421e09 398 PANTHER PTHR11808 14 396 2.0E-227 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS10545 84cb19c2f48f441582dbbc1d4c421e09 398 PIRSF PIRSF001434 1 395 1.6E-116 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS10545 84cb19c2f48f441582dbbc1d4c421e09 398 Gene3D G3DSA:3.40.640.10 15 262 2.2E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS10545 84cb19c2f48f441582dbbc1d4c421e09 398 PANTHER PTHR11808:SF45 14 396 2.0E-227 T 22-04-2016 NHAM_RS10545 84cb19c2f48f441582dbbc1d4c421e09 398 Gene3D G3DSA:3.90.1150.10 263 394 3.3E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS10545 84cb19c2f48f441582dbbc1d4c421e09 398 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 17 394 1.3E-156 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 NHAM_RS10545 84cb19c2f48f441582dbbc1d4c421e09 398 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 16 392 6.1E-98 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS10545 84cb19c2f48f441582dbbc1d4c421e09 398 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 206 220 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 PIRSF PIRSF000114 1 326 1.3E-83 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 316 33.508 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 187 208 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 Gene3D G3DSA:1.10.1040.10 179 320 5.4E-42 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 Gene3D G3DSA:3.40.50.720 6 177 4.0E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 SUPERFAMILY SSF48179 178 325 8.33E-43 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 159 3.4E-41 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 179 314 9.6E-39 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 PANTHER PTHR11728 6 325 1.9E-97 T 22-04-2016 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 9 26 1.1E-34 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 237 254 1.1E-34 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 57 84 1.1E-34 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 172 196 1.1E-34 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 132 152 1.1E-34 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 197 221 1.1E-34 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 NHAM_RS02905 61fe22805b5d765d549489264bb68e6f 326 SUPERFAMILY SSF51735 3 179 3.48E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 SUPERFAMILY SSF47384 340 415 1.96E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 Pfam PF11849 Domain of unknown function (DUF3369) 149 315 1.1E-46 T 22-04-2016 IPR021800 Domain of unknown function DUF3369 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 Gene3D G3DSA:3.40.50.2300 28 169 1.2E-12 T 22-04-2016 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 577 1.0E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 PANTHER PTHR24423 325 579 4.2E-95 T 22-04-2016 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 PANTHER PTHR24423 87 167 4.2E-95 T 22-04-2016 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 PANTHER PTHR24423 192 302 4.2E-95 T 22-04-2016 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 PANTHER PTHR24423:SF482 325 579 4.2E-95 T 22-04-2016 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 PANTHER PTHR24423:SF482 87 167 4.2E-95 T 22-04-2016 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 PANTHER PTHR24423:SF482 192 302 4.2E-95 T 22-04-2016 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 SUPERFAMILY SSF52172 26 175 1.99E-12 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 SUPERFAMILY SSF55781 167 324 3.41E-6 T 22-04-2016 IPR029016 GAF domain-like NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 7.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 7.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 577 7.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 Pfam PF00512 His Kinase A (phospho-acceptor) domain 354 414 2.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 SMART SM00387 467 580 2.7E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 SMART SM00388 353 422 4.0E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 SUPERFAMILY SSF55874 418 578 8.51E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 Pfam PF00072 Response regulator receiver domain 29 139 2.8E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 Gene3D G3DSA:3.30.565.10 425 578 1.9E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS18900 ac04acfe0d07aac4ddf1c29035c8b192 580 Gene3D G3DSA:1.10.287.130 346 414 2.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 SUPERFAMILY SSF55424 336 454 4.81E-36 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 4 449 1.8E-190 T 22-04-2016 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 Gene3D G3DSA:3.50.50.60 5 136 1.6E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 Gene3D G3DSA:3.30.390.30 339 454 6.7E-45 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PANTHER PTHR22912 2 452 5.2E-195 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 8.4E-29 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 8.4E-29 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 8.4E-29 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 8.4E-29 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 8.4E-29 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 320 2.1E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PIRSF PIRSF000350 2 453 1.4E-85 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 8.3E-67 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 8.3E-67 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 8.3E-67 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 8.3E-67 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 8.3E-67 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.3E-67 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 8.3E-67 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 8.3E-67 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 8.3E-67 T 22-04-2016 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 Gene3D G3DSA:3.50.50.60 137 329 1.1E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 SUPERFAMILY SSF51905 3 364 2.43E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 448 2.5E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NHAM_RS07570 8b89fe3d72263472ecabe37ad7688d90 461 PANTHER PTHR22912:SF106 2 452 5.2E-195 T 22-04-2016 NHAM_RS10830 40382dfee4c934f7ddab638eb3a9dd21 577 PANTHER PTHR30349:SF20 330 570 1.0E-17 T 22-04-2016 NHAM_RS10830 40382dfee4c934f7ddab638eb3a9dd21 577 PANTHER PTHR30349:SF20 257 301 1.0E-17 T 22-04-2016 NHAM_RS10830 40382dfee4c934f7ddab638eb3a9dd21 577 Gene3D G3DSA:1.10.150.130 272 362 1.8E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS10830 40382dfee4c934f7ddab638eb3a9dd21 577 Gene3D G3DSA:1.10.443.10 410 569 8.3E-19 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS10830 40382dfee4c934f7ddab638eb3a9dd21 577 SUPERFAMILY SSF56349 328 570 2.18E-33 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS10830 40382dfee4c934f7ddab638eb3a9dd21 577 SUPERFAMILY SSF56349 242 299 2.18E-33 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS10830 40382dfee4c934f7ddab638eb3a9dd21 577 Pfam PF00589 Phage integrase family 419 570 2.7E-11 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS10830 40382dfee4c934f7ddab638eb3a9dd21 577 PANTHER PTHR30349 330 570 1.0E-17 T 22-04-2016 NHAM_RS10830 40382dfee4c934f7ddab638eb3a9dd21 577 PANTHER PTHR30349 257 301 1.0E-17 T 22-04-2016 NHAM_RS17570 188cd28ababe925bb85ec9c4afaf1f42 338 SUPERFAMILY SSF50978 54 332 3.48E-32 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 NHAM_RS17570 188cd28ababe925bb85ec9c4afaf1f42 338 SMART SM00320 210 248 1.7 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 NHAM_RS17570 188cd28ababe925bb85ec9c4afaf1f42 338 SMART SM00320 52 89 32.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 NHAM_RS17570 188cd28ababe925bb85ec9c4afaf1f42 338 SMART SM00320 298 337 260.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 NHAM_RS17570 188cd28ababe925bb85ec9c4afaf1f42 338 SMART SM00320 256 295 4.6 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 NHAM_RS17570 188cd28ababe925bb85ec9c4afaf1f42 338 SMART SM00320 130 167 220.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 NHAM_RS17570 188cd28ababe925bb85ec9c4afaf1f42 338 Pfam PF12894 Anaphase-promoting complex subunit 4 WD40 domain 277 337 3.4E-6 T 22-04-2016 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain NHAM_RS17570 188cd28ababe925bb85ec9c4afaf1f42 338 Gene3D G3DSA:2.130.10.10 28 153 6.9E-11 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NHAM_RS17570 188cd28ababe925bb85ec9c4afaf1f42 338 Gene3D G3DSA:2.130.10.10 154 337 8.8E-24 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NHAM_RS14930 293006ba4e3c825f12ab0ae26ba1692b 660 PANTHER PTHR21716 11 114 2.7E-40 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like NHAM_RS14930 293006ba4e3c825f12ab0ae26ba1692b 660 PANTHER PTHR21716 131 430 2.7E-40 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like NHAM_RS14930 293006ba4e3c825f12ab0ae26ba1692b 660 Pfam PF01594 Domain of unknown function DUF20 27 136 4.4E-13 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like NHAM_RS14930 293006ba4e3c825f12ab0ae26ba1692b 660 Pfam PF01594 Domain of unknown function DUF20 175 370 9.5E-29 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 91 130 3.8E-18 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 PANTHER PTHR11615 359 680 1.2E-288 T 22-04-2016 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 PANTHER PTHR11615 3 330 1.2E-288 T 22-04-2016 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 106 118 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 Gene3D G3DSA:3.10.20.30 6 55 6.2E-7 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 SUPERFAMILY SSF54862 84 219 1.38E-36 T 22-04-2016 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 153 163 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 SUPERFAMILY SSF54292 1 67 3.14E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 68 2.3E-13 T 22-04-2016 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 PANTHER PTHR11615:SF115 359 680 1.2E-288 T 22-04-2016 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 PANTHER PTHR11615:SF115 3 330 1.2E-288 T 22-04-2016 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 Gene3D G3DSA:3.40.50.740 279 414 4.6E-47 T 22-04-2016 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 Gene3D G3DSA:3.40.50.740 499 630 4.6E-47 T 22-04-2016 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 SUPERFAMILY SSF53706 221 633 6.81E-96 T 22-04-2016 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 SMART SM00929 91 131 2.0E-22 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 Pfam PF00384 Molybdopterin oxidoreductase 279 601 7.3E-71 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 639 678 1.6E-14 T 22-04-2016 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 NHAM_RS11265 d613dd754a2c5faee52ad2a9c66a9d34 691 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 5 599 3.0E-215 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 NHAM_RS04015 ae00102b3171aaf5582091d0394adb04 414 Pfam PF05175 Methyltransferase small domain 253 358 7.3E-5 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 NHAM_RS04015 ae00102b3171aaf5582091d0394adb04 414 SUPERFAMILY SSF50249 3 58 3.6E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS04015 ae00102b3171aaf5582091d0394adb04 414 Gene3D G3DSA:2.40.50.140 4 71 1.6E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS04015 ae00102b3171aaf5582091d0394adb04 414 Gene3D G3DSA:3.40.50.150 235 410 1.6E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS04015 ae00102b3171aaf5582091d0394adb04 414 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 344 374 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site NHAM_RS04015 ae00102b3171aaf5582091d0394adb04 414 SUPERFAMILY SSF53335 59 412 1.01E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS04015 ae00102b3171aaf5582091d0394adb04 414 PANTHER PTHR11061 5 414 7.4E-69 T 22-04-2016 NHAM_RS04015 ae00102b3171aaf5582091d0394adb04 414 PANTHER PTHR11061:SF30 5 414 7.4E-69 T 22-04-2016 NHAM_RS14295 1b3c71f08b6b1427544d6960a381a63b 258 PANTHER PTHR35004 7 56 4.3E-54 T 22-04-2016 NHAM_RS14295 1b3c71f08b6b1427544d6960a381a63b 258 SUPERFAMILY SSF46689 3 58 6.57E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS14295 1b3c71f08b6b1427544d6960a381a63b 258 Gene3D G3DSA:1.10.10.60 4 43 5.1E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS14295 1b3c71f08b6b1427544d6960a381a63b 258 Pfam PF13384 Homeodomain-like domain 10 51 4.0E-7 T 22-04-2016 NHAM_RS14295 1b3c71f08b6b1427544d6960a381a63b 258 PANTHER PTHR35004:SF2 72 257 4.3E-54 T 22-04-2016 NHAM_RS14295 1b3c71f08b6b1427544d6960a381a63b 258 PANTHER PTHR35004 72 257 4.3E-54 T 22-04-2016 NHAM_RS14295 1b3c71f08b6b1427544d6960a381a63b 258 Pfam PF00665 Integrase core domain 142 257 1.5E-11 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS14295 1b3c71f08b6b1427544d6960a381a63b 258 PANTHER PTHR35004:SF2 7 56 4.3E-54 T 22-04-2016 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 PANTHER PTHR22912 1 323 2.3E-116 T 22-04-2016 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 279 297 1.0E-20 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.0E-20 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 1.0E-20 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 1.0E-20 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 65 75 1.0E-20 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 SUPERFAMILY SSF51905 1 316 2.96E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 3.3E-13 T 22-04-2016 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.3E-13 T 22-04-2016 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 3.3E-13 T 22-04-2016 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 PANTHER PTHR22912:SF158 1 323 2.3E-116 T 22-04-2016 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 Gene3D G3DSA:3.50.50.60 250 323 4.9E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 Gene3D G3DSA:3.50.50.60 6 127 4.9E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 Hamap MF_01685 Ferredoxin--NADP reductase. 6 332 40.92 T 22-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 291 3.7E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS06740 2ab869ef204c1ef4a3154a8de7a0aa2c 342 Gene3D G3DSA:3.50.50.60 129 244 3.5E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 Pfam PF17191 RecG wedge domain 16 178 6.3E-8 T 22-04-2016 IPR033454 RecG, wedge domain NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 PANTHER PTHR24031:SF249 302 599 2.2E-108 T 22-04-2016 NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 PANTHER PTHR24031:SF249 272 285 2.2E-108 T 22-04-2016 NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 PANTHER PTHR24031:SF249 623 692 2.2E-108 T 22-04-2016 NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 Pfam PF00271 Helicase conserved C-terminal domain 476 585 2.0E-16 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 Pfam PF00270 DEAD/DEAH box helicase 296 430 1.3E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 Gene3D G3DSA:3.40.50.300 259 452 3.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 Gene3D G3DSA:3.40.50.300 453 635 8.7E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 PANTHER PTHR24031 302 599 2.2E-108 T 22-04-2016 NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 PANTHER PTHR24031 272 285 2.2E-108 T 22-04-2016 NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 PANTHER PTHR24031 623 692 2.2E-108 T 22-04-2016 NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 SUPERFAMILY SSF50249 8 182 3.94E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 Gene3D G3DSA:2.40.50.140 53 141 5.6E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 SUPERFAMILY SSF52540 451 647 2.32E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 SMART SM00487 268 458 3.9E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 SMART SM00490 503 586 1.1E-17 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS10465 16bbe2b35a2f826c363a1704803df7f3 699 SUPERFAMILY SSF52540 186 451 3.28E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 PANTHER PTHR23135:SF5 2 454 3.0E-210 T 22-04-2016 NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 Pfam PF01225 Mur ligase family, catalytic domain 10 106 9.5E-30 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 PANTHER PTHR23135 2 454 3.0E-210 T 22-04-2016 NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 Pfam PF08245 Mur ligase middle domain 112 298 6.8E-29 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 Gene3D G3DSA:3.90.190.20 320 463 8.8E-50 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 SUPERFAMILY SSF53623 93 316 4.84E-69 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 10 456 4.3E-160 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 404 3.4E-20 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 SUPERFAMILY SSF53244 317 460 1.01E-46 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 SUPERFAMILY SSF51984 9 94 2.88E-28 T 22-04-2016 NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 Gene3D G3DSA:3.40.50.720 9 95 3.6E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 Gene3D G3DSA:3.40.1190.10 96 319 8.9E-86 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06530 df97f9f5ff1baf712e1a9d6fe4d78f31 467 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 7 465 41.616 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS15535 f8fc0f421bb8cb41eb3018206f079d0f 268 SUPERFAMILY SSF53335 143 266 3.58E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS15535 f8fc0f421bb8cb41eb3018206f079d0f 268 Gene3D G3DSA:3.40.50.150 143 244 6.7E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS15535 f8fc0f421bb8cb41eb3018206f079d0f 268 Pfam PF13489 Methyltransferase domain 99 240 6.1E-8 T 22-04-2016 NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 SMART SM00490 283 368 4.7E-14 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 Pfam PF08494 DEAD/H associated 629 818 2.5E-46 T 22-04-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 PANTHER PTHR24031 829 851 4.8E-61 T 22-04-2016 NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 PIRSF PIRSF037307 7 852 3.3E-198 T 22-04-2016 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 Gene3D G3DSA:3.40.50.300 256 411 6.6E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 Pfam PF00271 Helicase conserved C-terminal domain 261 363 3.7E-16 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 PANTHER PTHR24031:SF122 829 851 4.8E-61 T 22-04-2016 NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 Gene3D G3DSA:3.40.50.300 20 204 2.8E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 PANTHER PTHR24031 31 230 4.8E-61 T 22-04-2016 NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 PANTHER PTHR24031:SF122 31 230 4.8E-61 T 22-04-2016 NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 PANTHER PTHR24031:SF122 251 381 4.8E-61 T 22-04-2016 NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 17 847 0.0 T 22-04-2016 IPR026362 DEXH box helicase, DNA ligase-associated NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 PANTHER PTHR24031 251 381 4.8E-61 T 22-04-2016 NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 SMART SM00487 24 241 1.4E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 SUPERFAMILY SSF52540 38 208 7.02E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 SUPERFAMILY SSF52540 236 374 7.02E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01215 a991a685e199f97b9d7b86ef591dc626 853 Pfam PF00270 DEAD/DEAH box helicase 31 206 2.1E-22 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 Gene3D G3DSA:1.10.3850.10 855 1070 2.5E-52 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 SUPERFAMILY SSF82693 556 651 7.32E-17 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 Gene3D G3DSA:3.30.70.1430 559 646 2.4E-11 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 SUPERFAMILY SSF82714 183 266 2.49E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 Gene3D G3DSA:1.20.1640.10 287 498 1.3E-50 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PRINTS PR00702 Acriflavin resistance protein family signature 606 620 1.2E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.2E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.2E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.2E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.2E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.2E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.2E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 Pfam PF00873 AcrB/AcrD/AcrF family 828 1068 2.0E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 Pfam PF00873 AcrB/AcrD/AcrF family 5 775 2.2E-229 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 Gene3D G3DSA:3.30.2090.10 706 773 1.9E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 Gene3D G3DSA:3.30.2090.10 183 265 1.1E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 Gene3D G3DSA:3.30.2090.10 833 848 1.9E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 Gene3D G3DSA:3.30.70.1430 40 142 5.9E-28 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 SUPERFAMILY SSF82866 873 1068 3.01E-41 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 SUPERFAMILY SSF82693 40 134 3.66E-22 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 SUPERFAMILY SSF82714 706 775 2.49E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PANTHER PTHR32063:SF34 835 1080 0.0 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PANTHER PTHR32063:SF34 1 775 0.0 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PANTHER PTHR32063 835 1080 0.0 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 PANTHER PTHR32063 1 775 0.0 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 SUPERFAMILY SSF82693 848 893 4.45E-7 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 SUPERFAMILY SSF82693 661 702 4.45E-7 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 SUPERFAMILY SSF82693 136 182 6.28E-19 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 SUPERFAMILY SSF82693 268 324 6.28E-19 T 22-04-2016 NHAM_RS18470 f0f17a9ba7dd0885c6098ee5834887b1 1096 SUPERFAMILY SSF82866 290 491 1.31E-42 T 22-04-2016 NHAM_RS09345 6b3a1a50fc021b5cbfe39366c112c63f 465 PANTHER PTHR30026:SF3 11 455 2.9E-122 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 NHAM_RS09345 6b3a1a50fc021b5cbfe39366c112c63f 465 Gene3D G3DSA:1.20.1600.10 28 432 2.4E-77 T 22-04-2016 NHAM_RS09345 6b3a1a50fc021b5cbfe39366c112c63f 465 Pfam PF02321 Outer membrane efflux protein 32 225 8.1E-35 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NHAM_RS09345 6b3a1a50fc021b5cbfe39366c112c63f 465 Pfam PF02321 Outer membrane efflux protein 248 424 2.5E-30 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NHAM_RS09345 6b3a1a50fc021b5cbfe39366c112c63f 465 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 28 444 9.7E-97 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 NHAM_RS09345 6b3a1a50fc021b5cbfe39366c112c63f 465 SUPERFAMILY SSF56954 7 432 1.96E-87 T 22-04-2016 NHAM_RS09345 6b3a1a50fc021b5cbfe39366c112c63f 465 PANTHER PTHR30026 11 455 2.9E-122 T 22-04-2016 NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 SMART SM00271 2 60 1.3E-25 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 PRINTS PR00625 DnaJ domain signature 23 38 2.6E-15 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 PRINTS PR00625 DnaJ domain signature 5 23 2.6E-15 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 PRINTS PR00625 DnaJ domain signature 40 60 2.6E-15 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 Gene3D G3DSA:1.10.287.110 1 125 2.3E-25 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 Pfam PF01556 DnaJ C terminal domain 152 293 1.2E-37 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 22-04-2016 IPR018253 DnaJ domain, conserved site NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 PANTHER PTHR24078 1 294 4.2E-67 T 22-04-2016 NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 Gene3D G3DSA:2.60.260.20 147 215 1.6E-18 T 22-04-2016 NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 SUPERFAMILY SSF49493 220 294 7.98E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 Pfam PF00226 DnaJ domain 3 65 2.4E-22 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 SUPERFAMILY SSF49493 149 224 9.55E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 Gene3D G3DSA:2.60.260.20 218 294 4.2E-19 T 22-04-2016 NHAM_RS03970 e75364d6db5316a03fa3cde4ea5ca2da 319 SUPERFAMILY SSF46565 1 105 1.14E-25 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS09030 88efd908fd47d8d931047b1a1df576db 186 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 33 180 5.6E-46 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NHAM_RS09030 88efd908fd47d8d931047b1a1df576db 186 PANTHER PTHR11071 28 162 2.5E-49 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 NHAM_RS09030 88efd908fd47d8d931047b1a1df576db 186 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 71 83 3.4E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NHAM_RS09030 88efd908fd47d8d931047b1a1df576db 186 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 140 155 3.4E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NHAM_RS09030 88efd908fd47d8d931047b1a1df576db 186 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 127 139 3.4E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NHAM_RS09030 88efd908fd47d8d931047b1a1df576db 186 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 60 3.4E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NHAM_RS09030 88efd908fd47d8d931047b1a1df576db 186 SUPERFAMILY SSF50891 14 180 5.99E-51 T 22-04-2016 IPR029000 Cyclophilin-like domain NHAM_RS09030 88efd908fd47d8d931047b1a1df576db 186 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 66 83 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 NHAM_RS09030 88efd908fd47d8d931047b1a1df576db 186 Gene3D G3DSA:2.40.100.10 25 183 8.9E-50 T 22-04-2016 IPR029000 Cyclophilin-like domain NHAM_RS01910 2e673dc649aec76891f0b256cf076c19 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 4.7E-25 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS01910 2e673dc649aec76891f0b256cf076c19 67 PRINTS PR00050 Cold shock protein signature 40 58 3.2E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS01910 2e673dc649aec76891f0b256cf076c19 67 PRINTS PR00050 Cold shock protein signature 4 19 3.2E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS01910 2e673dc649aec76891f0b256cf076c19 67 PRINTS PR00050 Cold shock protein signature 25 34 3.2E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS01910 2e673dc649aec76891f0b256cf076c19 67 PANTHER PTHR11544 2 66 4.1E-23 T 22-04-2016 NHAM_RS01910 2e673dc649aec76891f0b256cf076c19 67 SUPERFAMILY SSF50249 2 65 4.29E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS01910 2e673dc649aec76891f0b256cf076c19 67 Gene3D G3DSA:2.40.50.140 2 65 5.0E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS01910 2e673dc649aec76891f0b256cf076c19 67 PIRSF PIRSF002599 1 67 3.3E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 NHAM_RS01910 2e673dc649aec76891f0b256cf076c19 67 SMART SM00357 3 67 1.6E-24 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS01910 2e673dc649aec76891f0b256cf076c19 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site NHAM_RS15360 97efa0500f91f97da70240582d12126c 135 PANTHER PTHR37936 3 135 1.3E-12 T 22-04-2016 NHAM_RS15360 97efa0500f91f97da70240582d12126c 135 Gene3D G3DSA:1.10.10.10 22 68 9.6E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS15360 97efa0500f91f97da70240582d12126c 135 Pfam PF01527 Transposase 24 78 4.3E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NHAM_RS15360 97efa0500f91f97da70240582d12126c 135 SUPERFAMILY SSF48295 20 63 5.75E-9 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS00725 bb5eaa0cbb91046ba05b656bfd13b816 313 Hamap MF_00162 Glutathione synthetase [gshB]. 1 313 156.684 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 NHAM_RS00725 bb5eaa0cbb91046ba05b656bfd13b816 313 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 120 1.3E-41 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 NHAM_RS00725 bb5eaa0cbb91046ba05b656bfd13b816 313 PANTHER PTHR21621 1 312 3.2E-127 T 22-04-2016 NHAM_RS00725 bb5eaa0cbb91046ba05b656bfd13b816 313 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 294 1.6E-69 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 NHAM_RS00725 bb5eaa0cbb91046ba05b656bfd13b816 313 Gene3D G3DSA:3.30.1490.20 137 191 7.9E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS00725 bb5eaa0cbb91046ba05b656bfd13b816 313 SUPERFAMILY SSF56059 124 309 5.61E-55 T 22-04-2016 NHAM_RS00725 bb5eaa0cbb91046ba05b656bfd13b816 313 Gene3D G3DSA:3.40.50.20 3 129 1.8E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS00725 bb5eaa0cbb91046ba05b656bfd13b816 313 Gene3D G3DSA:3.30.470.20 192 297 1.4E-42 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS00725 bb5eaa0cbb91046ba05b656bfd13b816 313 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 311 6.0E-119 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 NHAM_RS00725 bb5eaa0cbb91046ba05b656bfd13b816 313 SUPERFAMILY SSF52440 3 122 1.09E-40 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS00725 bb5eaa0cbb91046ba05b656bfd13b816 313 PANTHER PTHR21621:SF4 1 312 3.2E-127 T 22-04-2016 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 154 170 3.8E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 501 519 3.8E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 540 562 3.8E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 573 583 3.8E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 3.8E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 3.8E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 128 145 3.8E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 432 592 1.7E-9 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 629 669 5.7E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 SUPERFAMILY SSF50677 227 415 1.15E-44 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 Pfam PF09334 tRNA synthetases class I (M) 38 172 9.3E-17 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 Gene3D G3DSA:3.90.740.10 224 438 1.6E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 SUPERFAMILY SSF52374 4 227 1.58E-145 T 22-04-2016 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 SUPERFAMILY SSF52374 430 678 1.58E-145 T 22-04-2016 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 Gene3D G3DSA:3.40.50.620 439 589 4.0E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 Gene3D G3DSA:3.40.50.620 5 223 4.0E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 Gene3D G3DSA:3.40.50.620 629 658 4.0E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 Pfam PF08264 Anticodon-binding domain of tRNA 717 840 9.4E-15 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 222 413 9.2E-66 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PANTHER PTHR11946 1 207 0.0 T 22-04-2016 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PANTHER PTHR11946 246 590 0.0 T 22-04-2016 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PANTHER PTHR11946 629 877 0.0 T 22-04-2016 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 877 1.3E-304 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 SUPERFAMILY SSF47323 674 877 1.25E-30 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 5 878 22.075 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 Gene3D G3DSA:1.10.730.10 659 814 2.3E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PANTHER PTHR11946:SF7 1 207 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PANTHER PTHR11946:SF7 246 590 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS00490 739c46352f1b3d5155b33b3cc1ebb91e 878 PANTHER PTHR11946:SF7 629 877 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS02500 f29f4f1c55208b31adf069b5bb930607 413 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 26 411 0.0 T 22-04-2016 NHAM_RS02500 f29f4f1c55208b31adf069b5bb930607 413 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 17 413 6.8E-112 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 NHAM_RS02500 f29f4f1c55208b31adf069b5bb930607 413 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 413 152.645 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 NHAM_RS02500 f29f4f1c55208b31adf069b5bb930607 413 Gene3D G3DSA:3.60.70.12 16 285 4.6E-93 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 NHAM_RS02500 f29f4f1c55208b31adf069b5bb930607 413 PANTHER PTHR23100 5 413 7.6E-169 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 NHAM_RS02500 f29f4f1c55208b31adf069b5bb930607 413 PANTHER PTHR23100:SF0 5 413 7.6E-169 T 22-04-2016 NHAM_RS02500 f29f4f1c55208b31adf069b5bb930607 413 Pfam PF01960 ArgJ family 24 413 2.7E-138 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 NHAM_RS02500 f29f4f1c55208b31adf069b5bb930607 413 SUPERFAMILY SSF56266 19 410 4.58E-133 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 3.4E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 PRINTS PR00083 Histidinol dehydrogenase signature 34 58 3.4E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 3.4E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 3.4E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 3.4E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 3.4E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 3.4E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 3.4E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 PIRSF PIRSF000099 3 430 4.1E-159 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 Pfam PF00815 Histidinol dehydrogenase 24 428 8.7E-166 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 PANTHER PTHR21256 3 431 4.8E-202 T 22-04-2016 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 Gene3D G3DSA:3.40.50.1980 29 240 5.8E-77 T 22-04-2016 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 SUPERFAMILY SSF53720 28 429 1.33E-82 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 427 2.6E-158 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS01450 4115220db344ce01a5c1dcc6fa198aa4 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 3 428 41.441 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 NHAM_RS07110 c158c175350b975c50a4a532a6186c52 141 Pfam PF00460 Flagella basal body rod protein 12 39 1.7E-6 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 NHAM_RS07110 c158c175350b975c50a4a532a6186c52 141 PANTHER PTHR30435:SF2 7 140 2.2E-54 T 22-04-2016 NHAM_RS07110 c158c175350b975c50a4a532a6186c52 141 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 10 140 6.4E-42 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 NHAM_RS07110 c158c175350b975c50a4a532a6186c52 141 PANTHER PTHR30435 7 140 2.2E-54 T 22-04-2016 NHAM_RS07110 c158c175350b975c50a4a532a6186c52 141 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 93 137 4.5E-11 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PANTHER PTHR22912:SF48 1 311 1.2E-159 T 22-04-2016 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PANTHER PTHR22912 1 311 1.2E-159 T 22-04-2016 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 Gene3D G3DSA:3.50.50.60 232 309 3.9E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 Gene3D G3DSA:3.50.50.60 5 120 4.7E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 296 9.7E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 310 7.8E-124 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 9.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 9.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 9.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 9.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 9.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 9.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 9.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 9.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 273 291 9.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 Gene3D G3DSA:3.50.50.60 121 231 8.3E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 SUPERFAMILY SSF51905 1 309 2.45E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.1E-41 T 22-04-2016 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 2.1E-41 T 22-04-2016 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 2.1E-41 T 22-04-2016 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.1E-41 T 22-04-2016 NHAM_RS14785 70a561527191e228c24b2b37f653af82 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 2.1E-41 T 22-04-2016 NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 7.7E-93 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 183 3.1E-7 T 22-04-2016 NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 Gene3D G3DSA:3.40.50.720 1 244 1.9E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PANTHER PTHR24322 152 184 4.9E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PANTHER PTHR24322 11 136 4.9E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PANTHER PTHR24322:SF328 152 184 4.9E-51 T 22-04-2016 NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PANTHER PTHR24322:SF328 11 136 4.9E-51 T 22-04-2016 NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 9.5E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 9.5E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.5E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.5E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 9.5E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 9.5E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 9.0E-66 T 22-04-2016 NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NHAM_RS11990 8f56c5d192a5b7814103c89bd21c0b02 245 SUPERFAMILY SSF51735 6 244 6.78E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00220 3c1878dfbac0697f575c2f61824e3084 333 SUPERFAMILY SSF52283 6 140 1.59E-33 T 22-04-2016 NHAM_RS00220 3c1878dfbac0697f575c2f61824e3084 333 SUPERFAMILY SSF51735 106 298 1.1E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00220 3c1878dfbac0697f575c2f61824e3084 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 155 182 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NHAM_RS00220 3c1878dfbac0697f575c2f61824e3084 333 Gene3D G3DSA:3.40.50.720 6 115 2.0E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00220 3c1878dfbac0697f575c2f61824e3084 333 PANTHER PTHR10996 1 333 3.7E-112 T 22-04-2016 NHAM_RS00220 3c1878dfbac0697f575c2f61824e3084 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 18 328 5.5E-30 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NHAM_RS00220 3c1878dfbac0697f575c2f61824e3084 333 Gene3D G3DSA:3.40.50.720 116 298 2.0E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00220 3c1878dfbac0697f575c2f61824e3084 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 297 1.3E-52 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NHAM_RS03845 c6608a2185984f77b5f57af53a8cb554 757 PANTHER PTHR30332 76 741 4.4E-117 T 22-04-2016 NHAM_RS03845 c6608a2185984f77b5f57af53a8cb554 757 PRINTS PR00811 Bacterial general secretion pathway protein D signature 591 601 4.4E-17 T 22-04-2016 IPR001775 GspD/PilQ family NHAM_RS03845 c6608a2185984f77b5f57af53a8cb554 757 PRINTS PR00811 Bacterial general secretion pathway protein D signature 711 725 4.4E-17 T 22-04-2016 IPR001775 GspD/PilQ family NHAM_RS03845 c6608a2185984f77b5f57af53a8cb554 757 PRINTS PR00811 Bacterial general secretion pathway protein D signature 688 706 4.4E-17 T 22-04-2016 IPR001775 GspD/PilQ family NHAM_RS03845 c6608a2185984f77b5f57af53a8cb554 757 PRINTS PR00811 Bacterial general secretion pathway protein D signature 468 478 4.4E-17 T 22-04-2016 IPR001775 GspD/PilQ family NHAM_RS03845 c6608a2185984f77b5f57af53a8cb554 757 PRINTS PR00811 Bacterial general secretion pathway protein D signature 556 580 4.4E-17 T 22-04-2016 IPR001775 GspD/PilQ family NHAM_RS03845 c6608a2185984f77b5f57af53a8cb554 757 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 79 732 1.1E-129 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 NHAM_RS03845 c6608a2185984f77b5f57af53a8cb554 757 Pfam PF00263 Bacterial type II and III secretion system protein 560 724 8.0E-44 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 NHAM_RS03845 c6608a2185984f77b5f57af53a8cb554 757 PANTHER PTHR30332:SF0 76 741 4.4E-117 T 22-04-2016 NHAM_RS03845 c6608a2185984f77b5f57af53a8cb554 757 PRINTS PR01032 Gene IV protein signature 581 604 5.9E-5 T 22-04-2016 NHAM_RS03845 c6608a2185984f77b5f57af53a8cb554 757 PRINTS PR01032 Gene IV protein signature 651 679 5.9E-5 T 22-04-2016 NHAM_RS03845 c6608a2185984f77b5f57af53a8cb554 757 Pfam PF03958 Bacterial type II/III secretion system short domain 312 468 2.2E-8 T 22-04-2016 IPR005644 NolW-like NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PANTHER PTHR11670 1 309 3.0E-303 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PANTHER PTHR11670 329 467 3.0E-303 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 466 5.8E-239 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PRINTS PR00415 Aconitase family signature 288 302 4.07E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PRINTS PR00415 Aconitase family signature 211 224 4.07E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PRINTS PR00415 Aconitase family signature 121 134 4.07E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PRINTS PR00415 Aconitase family signature 197 210 4.07E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PRINTS PR00415 Aconitase family signature 135 150 4.07E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PRINTS PR00415 Aconitase family signature 84 97 4.07E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PRINTS PR00415 Aconitase family signature 401 414 4.07E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PRINTS PR00415 Aconitase family signature 345 356 4.07E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PRINTS PR00415 Aconitase family signature 110 118 4.07E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 3.7E-152 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 SUPERFAMILY SSF53732 4 467 3.79E-164 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 Gene3D G3DSA:3.40.1060.10 169 283 6.2E-39 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PANTHER PTHR11670:SF38 1 309 3.0E-303 T 22-04-2016 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 PANTHER PTHR11670:SF38 329 467 3.0E-303 T 22-04-2016 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 Gene3D G3DSA:3.30.499.10 3 160 1.8E-25 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 468 59.855 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 Gene3D G3DSA:3.30.499.10 337 467 5.0E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 Gene3D G3DSA:3.30.499.10 295 305 5.0E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18380 f5742d087c6fb4ac26b98827fab7009e 468 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS23840 e665f94bf761c73415538957275d5c0a 60 SUPERFAMILY SSF47598 8 53 3.11E-15 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 NHAM_RS23840 e665f94bf761c73415538957275d5c0a 60 Gene3D G3DSA:1.10.1220.10 8 52 1.4E-17 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 Pfam PF01266 FAD dependent oxidoreductase 6 328 4.0E-44 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 387 492 1.5E-14 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 79 91 1.5E-27 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 1.5E-27 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 351 363 1.5E-27 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 1.5E-27 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 318 324 1.5E-27 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 1.5E-27 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 SUPERFAMILY SSF54373 231 324 1.06E-6 T 22-04-2016 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 10 27 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 SUPERFAMILY SSF51905 5 265 1.79E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 SUPERFAMILY SSF51905 317 379 1.79E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 PANTHER PTHR11985:SF1 1 496 2.7E-177 T 22-04-2016 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 Gene3D G3DSA:3.50.50.60 5 246 2.0E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS05560 f99cf192901326e8df6ce475ecc79029 514 PANTHER PTHR11985 1 496 2.7E-177 T 22-04-2016 NHAM_RS08395 1f2d4b45fe148cbe930a30c006f4adba 205 Gene3D G3DSA:1.10.1050.10 1 96 4.1E-31 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 NHAM_RS08395 1f2d4b45fe148cbe930a30c006f4adba 205 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 6 93 4.3E-19 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 NHAM_RS08395 1f2d4b45fe148cbe930a30c006f4adba 205 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 205 30.588 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 NHAM_RS08395 1f2d4b45fe148cbe930a30c006f4adba 205 Gene3D G3DSA:3.10.290.10 97 194 4.6E-30 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS08395 1f2d4b45fe148cbe930a30c006f4adba 205 SUPERFAMILY SSF55174 6 205 4.97E-60 T 22-04-2016 NHAM_RS08395 1f2d4b45fe148cbe930a30c006f4adba 205 Pfam PF01479 S4 domain 94 141 3.2E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS08395 1f2d4b45fe148cbe930a30c006f4adba 205 SMART SM00363 94 158 4.1E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS08395 1f2d4b45fe148cbe930a30c006f4adba 205 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 6 205 1.5E-67 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 NHAM_RS08395 1f2d4b45fe148cbe930a30c006f4adba 205 PANTHER PTHR11831 1 205 3.3E-69 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 NHAM_RS08395 1f2d4b45fe148cbe930a30c006f4adba 205 SMART SM01390 3 93 2.7E-34 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 NHAM_RS08395 1f2d4b45fe148cbe930a30c006f4adba 205 PANTHER PTHR11831:SF4 1 205 3.3E-69 T 22-04-2016 NHAM_RS08395 1f2d4b45fe148cbe930a30c006f4adba 205 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 416 40.048 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 287 392 1.4E-15 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 SUPERFAMILY SSF50621 255 416 2.09E-52 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 PANTHER PTHR11482:SF5 1 421 1.7E-171 T 22-04-2016 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 1.4E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 383 405 1.4E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 1.4E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 1.4E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 37 282 2.3E-61 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 2.6E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 2.6E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 2.6E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 373 386 2.6E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 2.6E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 Gene3D G3DSA:2.40.37.10 270 418 2.1E-46 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 SUPERFAMILY SSF51419 26 284 1.06E-81 T 22-04-2016 IPR029066 PLP-binding barrel NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 Gene3D G3DSA:3.20.20.10 36 269 4.8E-84 T 22-04-2016 IPR029066 PLP-binding barrel NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 PANTHER PTHR11482 1 421 1.7E-171 T 22-04-2016 NHAM_RS17835 f6030f59fdc45c537b74843c1b37fe80 421 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 415 2.6E-146 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS16690 27d80302ff8ab35e6ad88f7ef3e5027c 782 Gene3D G3DSA:2.170.130.10 100 210 7.8E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS16690 27d80302ff8ab35e6ad88f7ef3e5027c 782 SUPERFAMILY SSF56935 511 781 2.29E-72 T 22-04-2016 NHAM_RS16690 27d80302ff8ab35e6ad88f7ef3e5027c 782 SUPERFAMILY SSF56935 102 481 2.29E-72 T 22-04-2016 NHAM_RS16690 27d80302ff8ab35e6ad88f7ef3e5027c 782 Pfam PF07715 TonB-dependent Receptor Plug Domain 105 206 1.7E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS16690 27d80302ff8ab35e6ad88f7ef3e5027c 782 PANTHER PTHR32552 95 782 3.3E-218 T 22-04-2016 NHAM_RS16690 27d80302ff8ab35e6ad88f7ef3e5027c 782 PANTHER PTHR32552:SF19 95 782 3.3E-218 T 22-04-2016 NHAM_RS16690 27d80302ff8ab35e6ad88f7ef3e5027c 782 Pfam PF00593 TonB dependent receptor 529 779 2.6E-18 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS16690 27d80302ff8ab35e6ad88f7ef3e5027c 782 Gene3D G3DSA:2.40.170.20 247 781 8.6E-44 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS09145 cba106e88766d9a741e372070d698de4 79 Pfam PF02416 mttA/Hcf106 family 4 54 1.9E-11 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 NHAM_RS09145 cba106e88766d9a741e372070d698de4 79 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 6.9E-21 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 NHAM_RS09145 cba106e88766d9a741e372070d698de4 79 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 65 21.005 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 NHAM_RS09145 cba106e88766d9a741e372070d698de4 79 PANTHER PTHR33162 1 52 4.8E-13 T 22-04-2016 NHAM_RS04800 fc544d5abbd3212f4cbcbf45fd8459d9 691 PANTHER PTHR11699:SF12 2 529 1.1E-139 T 22-04-2016 IPR011966 Phenylacetic acid degradation protein PaaN NHAM_RS04800 fc544d5abbd3212f4cbcbf45fd8459d9 691 Pfam PF01575 MaoC like domain 545 655 7.6E-22 T 22-04-2016 IPR002539 MaoC-like domain NHAM_RS04800 fc544d5abbd3212f4cbcbf45fd8459d9 691 Gene3D G3DSA:3.40.605.10 9 269 3.0E-36 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS04800 fc544d5abbd3212f4cbcbf45fd8459d9 691 SUPERFAMILY SSF54637 535 679 2.07E-36 T 22-04-2016 IPR029069 HotDog domain NHAM_RS04800 fc544d5abbd3212f4cbcbf45fd8459d9 691 Pfam PF00171 Aldehyde dehydrogenase family 59 505 6.5E-61 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS04800 fc544d5abbd3212f4cbcbf45fd8459d9 691 Gene3D G3DSA:3.40.309.10 270 461 7.1E-38 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NHAM_RS04800 fc544d5abbd3212f4cbcbf45fd8459d9 691 Gene3D G3DSA:3.10.129.10 533 679 3.2E-42 T 22-04-2016 IPR029069 HotDog domain NHAM_RS04800 fc544d5abbd3212f4cbcbf45fd8459d9 691 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 9 679 1.2E-304 T 22-04-2016 IPR011966 Phenylacetic acid degradation protein PaaN NHAM_RS04800 fc544d5abbd3212f4cbcbf45fd8459d9 691 SUPERFAMILY SSF53720 9 510 3.8E-83 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NHAM_RS04800 fc544d5abbd3212f4cbcbf45fd8459d9 691 PANTHER PTHR11699 2 529 1.1E-139 T 22-04-2016 NHAM_RS05235 22b2ee592bf9b3d6ee629e25883106aa 402 Gene3D G3DSA:2.120.10.10 48 233 8.8E-19 T 22-04-2016 IPR011040 Sialidases NHAM_RS05235 22b2ee592bf9b3d6ee629e25883106aa 402 SUPERFAMILY SSF50939 46 340 9.81E-25 T 22-04-2016 IPR011040 Sialidases NHAM_RS05235 22b2ee592bf9b3d6ee629e25883106aa 402 Gene3D G3DSA:2.120.10.10 269 382 3.7E-14 T 22-04-2016 IPR011040 Sialidases NHAM_RS05235 22b2ee592bf9b3d6ee629e25883106aa 402 Pfam PF13088 BNR repeat-like domain 63 370 1.5E-9 T 22-04-2016 IPR011040 Sialidases NHAM_RS11330 46f6317000deb4ca24bc033684333e27 285 Pfam PF13649 Methyltransferase domain 54 148 1.5E-17 T 22-04-2016 NHAM_RS11330 46f6317000deb4ca24bc033684333e27 285 Gene3D G3DSA:3.40.50.150 21 269 2.0E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS11330 46f6317000deb4ca24bc033684333e27 285 PANTHER PTHR10108:SF855 15 212 6.0E-39 T 22-04-2016 NHAM_RS11330 46f6317000deb4ca24bc033684333e27 285 PANTHER PTHR10108 15 212 6.0E-39 T 22-04-2016 NHAM_RS11330 46f6317000deb4ca24bc033684333e27 285 SUPERFAMILY SSF53335 15 213 2.39E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS13115 cc86961cf46537770607d57a456ce5c5 230 PANTHER PTHR12714:SF2 12 230 7.4E-63 T 22-04-2016 NHAM_RS13115 cc86961cf46537770607d57a456ce5c5 230 Pfam PF04191 Phospholipid methyltransferase 115 207 2.6E-12 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 NHAM_RS13115 cc86961cf46537770607d57a456ce5c5 230 PANTHER PTHR12714 12 230 7.4E-63 T 22-04-2016 NHAM_RS16265 e37bc6dcc2a85565d83187e6c9e34525 148 Pfam PF14437 MafB19-like deaminase 5 148 1.4E-30 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 NHAM_RS16265 e37bc6dcc2a85565d83187e6c9e34525 148 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 148 47.068 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 NHAM_RS16265 e37bc6dcc2a85565d83187e6c9e34525 148 PANTHER PTHR11079 6 148 1.2E-42 T 22-04-2016 NHAM_RS16265 e37bc6dcc2a85565d83187e6c9e34525 148 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 NHAM_RS16265 e37bc6dcc2a85565d83187e6c9e34525 148 Gene3D G3DSA:3.40.140.10 3 146 6.4E-55 T 22-04-2016 NHAM_RS16265 e37bc6dcc2a85565d83187e6c9e34525 148 SUPERFAMILY SSF53927 5 148 8.03E-52 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 7.6E-41 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 8.4E-99 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 Pfam PF00303 Thymidylate synthase 2 264 3.1E-122 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 8.5E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 8.5E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 8.5E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 8.5E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 8.5E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 SUPERFAMILY SSF55831 1 264 9.29E-129 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 PANTHER PTHR11548 1 264 7.3E-193 T 22-04-2016 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 Gene3D G3DSA:3.30.572.10 1 264 8.1E-133 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NHAM_RS13990 aab9ae82d39c4cdbbc2d5210b4e3fea2 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 46.164 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 NHAM_RS07235 f388e0a5e7c54464af76219746d02872 253 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 189 201 2.8E-9 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 NHAM_RS07235 f388e0a5e7c54464af76219746d02872 253 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 51 66 2.8E-9 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 NHAM_RS07235 f388e0a5e7c54464af76219746d02872 253 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 106 120 2.8E-9 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 NHAM_RS07235 f388e0a5e7c54464af76219746d02872 253 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 61 66 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 NHAM_RS07235 f388e0a5e7c54464af76219746d02872 253 SMART SM00020 23 242 2.3E-8 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 NHAM_RS07235 f388e0a5e7c54464af76219746d02872 253 PANTHER PTHR24258 50 251 2.1E-19 T 22-04-2016 NHAM_RS07235 f388e0a5e7c54464af76219746d02872 253 Pfam PF00089 Trypsin 39 242 7.3E-22 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 NHAM_RS07235 f388e0a5e7c54464af76219746d02872 253 Gene3D G3DSA:2.40.10.10 42 116 3.7E-13 T 22-04-2016 NHAM_RS07235 f388e0a5e7c54464af76219746d02872 253 SUPERFAMILY SSF50494 32 247 1.01E-32 T 22-04-2016 IPR009003 Peptidase S1, PA clan NHAM_RS07235 f388e0a5e7c54464af76219746d02872 253 Gene3D G3DSA:2.40.10.10 117 246 1.7E-10 T 22-04-2016 NHAM_RS13690 b9808062cab9f8e6d3986b14c3e4c1a7 394 PIRSF PIRSF005962 2 394 6.0E-125 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 NHAM_RS13690 b9808062cab9f8e6d3986b14c3e4c1a7 394 SUPERFAMILY SSF53187 2 207 6.95E-87 T 22-04-2016 NHAM_RS13690 b9808062cab9f8e6d3986b14c3e4c1a7 394 SUPERFAMILY SSF53187 308 392 6.95E-87 T 22-04-2016 NHAM_RS13690 b9808062cab9f8e6d3986b14c3e4c1a7 394 Gene3D G3DSA:3.30.70.360 191 307 5.5E-43 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS13690 b9808062cab9f8e6d3986b14c3e4c1a7 394 SUPERFAMILY SSF55031 194 306 3.66E-31 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS13690 b9808062cab9f8e6d3986b14c3e4c1a7 394 Pfam PF01546 Peptidase family M20/M25/M40 83 389 2.6E-40 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NHAM_RS13690 b9808062cab9f8e6d3986b14c3e4c1a7 394 PANTHER PTHR11014 1 394 6.8E-161 T 22-04-2016 NHAM_RS13690 b9808062cab9f8e6d3986b14c3e4c1a7 394 Pfam PF07687 Peptidase dimerisation domain 197 287 2.0E-9 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS13690 b9808062cab9f8e6d3986b14c3e4c1a7 394 Gene3D G3DSA:3.40.630.10 308 392 5.6E-101 T 22-04-2016 NHAM_RS13690 b9808062cab9f8e6d3986b14c3e4c1a7 394 Gene3D G3DSA:3.40.630.10 3 188 5.6E-101 T 22-04-2016 NHAM_RS13690 b9808062cab9f8e6d3986b14c3e4c1a7 394 PANTHER PTHR11014:SF63 1 394 6.8E-161 T 22-04-2016 NHAM_RS13690 b9808062cab9f8e6d3986b14c3e4c1a7 394 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 379 9.0E-113 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 NHAM_RS20265 5cbc4567c0d25535e76119b76c0d47f4 171 Pfam PF00565 Staphylococcal nuclease homologue 39 142 3.4E-13 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold NHAM_RS20265 5cbc4567c0d25535e76119b76c0d47f4 171 PANTHER PTHR12302 26 157 5.2E-26 T 22-04-2016 NHAM_RS20265 5cbc4567c0d25535e76119b76c0d47f4 171 PANTHER PTHR12302:SF0 26 157 5.2E-26 T 22-04-2016 NHAM_RS20265 5cbc4567c0d25535e76119b76c0d47f4 171 Gene3D G3DSA:2.40.50.90 26 143 6.6E-21 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold NHAM_RS20265 5cbc4567c0d25535e76119b76c0d47f4 171 SMART SM00318 18 143 1.9E-19 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold NHAM_RS20265 5cbc4567c0d25535e76119b76c0d47f4 171 SUPERFAMILY SSF50199 26 149 2.09E-31 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold NHAM_RS11755 ef09d8798306f349e09f430f378e05f5 613 Pfam PF01368 DHH family 105 201 5.5E-11 T 22-04-2016 IPR001667 DDH domain NHAM_RS11755 ef09d8798306f349e09f430f378e05f5 613 Pfam PF02272 DHHA1 domain 408 474 3.8E-11 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 NHAM_RS11755 ef09d8798306f349e09f430f378e05f5 613 PANTHER PTHR30255:SF2 22 613 5.2E-190 T 22-04-2016 NHAM_RS11755 ef09d8798306f349e09f430f378e05f5 613 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 51 601 2.8E-153 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 NHAM_RS11755 ef09d8798306f349e09f430f378e05f5 613 SUPERFAMILY SSF64182 79 479 1.7E-110 T 22-04-2016 NHAM_RS11755 ef09d8798306f349e09f430f378e05f5 613 PANTHER PTHR30255 22 613 5.2E-190 T 22-04-2016 NHAM_RS20445 825b986ca4ff329d6d5c84ae39ded2f4 161 PANTHER PTHR30007:SF0 16 148 2.0E-37 T 22-04-2016 NHAM_RS20445 825b986ca4ff329d6d5c84ae39ded2f4 161 PANTHER PTHR30007 16 148 2.0E-37 T 22-04-2016 NHAM_RS20445 825b986ca4ff329d6d5c84ae39ded2f4 161 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 23 94 3.8E-24 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS13650 e91dafff7cb70e7944d792c13ab4a8de 616 Gene3D G3DSA:3.40.810.20 401 478 2.6E-4 T 22-04-2016 NHAM_RS13650 e91dafff7cb70e7944d792c13ab4a8de 616 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 334 497 1.3E-45 T 22-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain NHAM_RS13650 e91dafff7cb70e7944d792c13ab4a8de 616 SUPERFAMILY SSF100950 225 518 1.05E-47 T 22-04-2016 NHAM_RS13650 e91dafff7cb70e7944d792c13ab4a8de 616 PANTHER PTHR21432 19 67 9.8E-124 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 NHAM_RS13650 e91dafff7cb70e7944d792c13ab4a8de 616 PANTHER PTHR21432 302 554 9.8E-124 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 NHAM_RS13650 e91dafff7cb70e7944d792c13ab4a8de 616 PANTHER PTHR21432 94 275 9.8E-124 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 NHAM_RS13650 e91dafff7cb70e7944d792c13ab4a8de 616 PANTHER PTHR21432:SF18 19 67 9.8E-124 T 22-04-2016 NHAM_RS13650 e91dafff7cb70e7944d792c13ab4a8de 616 PANTHER PTHR21432:SF18 302 554 9.8E-124 T 22-04-2016 NHAM_RS13650 e91dafff7cb70e7944d792c13ab4a8de 616 PANTHER PTHR21432:SF18 94 275 9.8E-124 T 22-04-2016 NHAM_RS13650 e91dafff7cb70e7944d792c13ab4a8de 616 Gene3D G3DSA:3.30.750.70 224 347 3.6E-29 T 22-04-2016 NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 Pfam PF03453 MoeA N-terminal region (domain I and II) 17 179 1.2E-34 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 Gene3D G3DSA:2.40.340.10 344 414 5.4E-15 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 PANTHER PTHR10192 13 418 2.9E-184 T 22-04-2016 NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 189 325 1.5E-30 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 Gene3D G3DSA:3.90.105.10 144 174 5.1E-17 T 22-04-2016 NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 SUPERFAMILY SSF53218 189 333 1.27E-41 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 Gene3D G3DSA:3.40.980.10 175 343 7.7E-57 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 SUPERFAMILY SSF63867 339 417 4.84E-17 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 SUPERFAMILY SSF63882 14 187 5.89E-52 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 PANTHER PTHR10192:SF17 13 418 2.9E-184 T 22-04-2016 NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 SMART SM00852 192 329 4.4E-40 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 Gene3D G3DSA:2.170.190.11 59 143 7.3E-29 T 22-04-2016 NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 Pfam PF00994 Probable molybdopterin binding domain 192 327 1.9E-24 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16055 8bfd3f8443d0c103d0de9842eb9da3c9 418 Pfam PF03454 MoeA C-terminal region (domain IV) 343 413 1.5E-14 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS18725 6e53a8092c2a98e426a58ba2b047dacf 243 SUPERFAMILY SSF52540 9 241 8.31E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18725 6e53a8092c2a98e426a58ba2b047dacf 243 PANTHER PTHR24220:SF568 13 242 2.7E-105 T 22-04-2016 NHAM_RS18725 6e53a8092c2a98e426a58ba2b047dacf 243 SMART SM00382 36 220 1.1E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS18725 6e53a8092c2a98e426a58ba2b047dacf 243 Pfam PF00005 ABC transporter 27 169 1.5E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS18725 6e53a8092c2a98e426a58ba2b047dacf 243 PANTHER PTHR24220 13 242 2.7E-105 T 22-04-2016 NHAM_RS18725 6e53a8092c2a98e426a58ba2b047dacf 243 Gene3D G3DSA:3.40.50.300 8 240 2.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11250 5b876ee786ba227cbabf1ae82a804fe2 212 PANTHER PTHR33269 1 197 1.1E-71 T 22-04-2016 NHAM_RS11250 5b876ee786ba227cbabf1ae82a804fe2 212 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 166 7.3E-39 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 NHAM_RS11250 5b876ee786ba227cbabf1ae82a804fe2 212 PANTHER PTHR33269:SF4 1 197 1.1E-71 T 22-04-2016 NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 Pfam PF13541 Subunit ChlI of Mg-chelatase 343 428 1.6E-7 T 22-04-2016 NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 SUPERFAMILY SSF52540 65 291 2.98E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 PRINTS PR01874 DNA repair protein radA signature 80 108 3.8E-90 T 22-04-2016 NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 PRINTS PR01874 DNA repair protein radA signature 321 344 3.8E-90 T 22-04-2016 NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 PRINTS PR01874 DNA repair protein radA signature 173 197 3.8E-90 T 22-04-2016 NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 PRINTS PR01874 DNA repair protein radA signature 122 139 3.8E-90 T 22-04-2016 NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 PRINTS PR01874 DNA repair protein radA signature 212 240 3.8E-90 T 22-04-2016 NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 PRINTS PR01874 DNA repair protein radA signature 10 34 3.8E-90 T 22-04-2016 NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 PRINTS PR01874 DNA repair protein radA signature 247 273 3.8E-90 T 22-04-2016 NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 PANTHER PTHR32472 1 434 1.9E-184 T 22-04-2016 NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 Gene3D G3DSA:3.40.50.300 65 276 7.0E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 SUPERFAMILY SSF54211 254 268 3.15E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 SUPERFAMILY SSF54211 302 449 3.15E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 Gene3D G3DSA:3.30.230.10 283 434 1.3E-30 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 445 4.8E-166 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 Pfam PF13481 AAA domain 66 221 3.1E-15 T 22-04-2016 NHAM_RS11675 6276952bc583f06806f4ef9e8bff34ba 482 SMART SM00382 88 243 1.9E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS14135 202077096f9dbe01a181a3c4fcc6574b 174 PANTHER PTHR35604:SF1 22 150 1.4E-18 T 22-04-2016 NHAM_RS14135 202077096f9dbe01a181a3c4fcc6574b 174 PANTHER PTHR35604 22 150 1.4E-18 T 22-04-2016 NHAM_RS14135 202077096f9dbe01a181a3c4fcc6574b 174 Pfam PF05598 Transposase domain (DUF772) 54 126 3.4E-21 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS06135 748973c92504149527ea3145a6798985 241 Pfam PF02348 Cytidylyltransferase 6 112 7.8E-14 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 NHAM_RS06135 748973c92504149527ea3145a6798985 241 SUPERFAMILY SSF53448 5 210 4.79E-20 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS06135 748973c92504149527ea3145a6798985 241 Gene3D G3DSA:3.90.550.10 5 163 4.1E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS06135 748973c92504149527ea3145a6798985 241 PANTHER PTHR21485:SF16 1 110 1.4E-13 T 22-04-2016 NHAM_RS06135 748973c92504149527ea3145a6798985 241 PANTHER PTHR21485 1 110 1.4E-13 T 22-04-2016 NHAM_RS17985 90e23bf66c9bd20fb428c651d8fd0566 466 Pfam PF07486 Cell Wall Hydrolase 313 423 2.7E-23 T 22-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 NHAM_RS17985 90e23bf66c9bd20fb428c651d8fd0566 466 PANTHER PTHR21666:SF178 71 428 1.4E-87 T 22-04-2016 NHAM_RS17985 90e23bf66c9bd20fb428c651d8fd0566 466 PANTHER PTHR21666 71 428 1.4E-87 T 22-04-2016 NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 SMART SM00490 506 592 9.2E-18 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 Pfam PF02151 UvrB/uvrC motif 674 707 1.2E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 Gene3D G3DSA:3.40.50.300 54 206 2.9E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 Gene3D G3DSA:3.40.50.300 304 384 1.8E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 Gene3D G3DSA:3.40.50.300 434 455 1.8E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 51 706 1.6E-304 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 Hamap MF_00204 UvrABC system protein B [uvrB]. 49 708 41.611 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 Pfam PF00271 Helicase conserved C-terminal domain 489 591 1.0E-17 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 Gene3D G3DSA:4.10.860.10 669 710 5.5E-16 T 22-04-2016 IPR001943 UVR domain GO:0005515 NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 SMART SM00487 55 472 2.3E-22 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 SUPERFAMILY SSF52540 80 128 1.48E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 SUPERFAMILY SSF46600 668 707 1.01E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 Pfam PF04851 Type III restriction enzyme, res subunit 58 185 3.9E-12 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 PANTHER PTHR24029 45 730 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 SUPERFAMILY SSF52540 51 461 1.24E-128 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 Pfam PF12344 Ultra-violet resistance protein B 598 639 9.9E-22 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 SUPERFAMILY SSF52540 505 627 1.48E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 Gene3D G3DSA:3.40.50.300 473 625 7.9E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14995 e471f7a166a155dc084436ce1235e4fe 842 Gene3D G3DSA:3.30.2060.10 207 285 6.3E-14 T 22-04-2016 NHAM_RS02865 af2f919ab712c17bb11251a86bc9179b 347 PANTHER PTHR11203 1 222 1.7E-107 T 22-04-2016 NHAM_RS02865 af2f919ab712c17bb11251a86bc9179b 347 Pfam PF00753 Metallo-beta-lactamase superfamily 25 164 3.8E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS02865 af2f919ab712c17bb11251a86bc9179b 347 PANTHER PTHR11203:SF35 1 222 1.7E-107 T 22-04-2016 NHAM_RS02865 af2f919ab712c17bb11251a86bc9179b 347 Gene3D G3DSA:3.60.15.10 26 187 9.7E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS02865 af2f919ab712c17bb11251a86bc9179b 347 SUPERFAMILY SSF56281 9 312 6.63E-62 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS02865 af2f919ab712c17bb11251a86bc9179b 347 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 8 332 6.9E-146 T 22-04-2016 IPR026360 Putative exonuclease, DNA ligase-associated NHAM_RS04485 3cb0052777571757c658d303192ba75f 262 PANTHER PTHR24322 21 150 3.4E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS04485 3cb0052777571757c658d303192ba75f 262 PANTHER PTHR24322 166 198 3.4E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS04485 3cb0052777571757c658d303192ba75f 262 Gene3D G3DSA:3.40.50.720 11 260 8.2E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS04485 3cb0052777571757c658d303192ba75f 262 SUPERFAMILY SSF51735 13 260 1.27E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS04485 3cb0052777571757c658d303192ba75f 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 259 4.3E-85 T 22-04-2016 NHAM_RS04485 3cb0052777571757c658d303192ba75f 262 PANTHER PTHR24322:SF317 21 150 3.4E-52 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 NHAM_RS04485 3cb0052777571757c658d303192ba75f 262 PANTHER PTHR24322:SF317 166 198 3.4E-52 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 NHAM_RS04485 3cb0052777571757c658d303192ba75f 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 6.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS04485 3cb0052777571757c658d303192ba75f 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 6.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS04485 3cb0052777571757c658d303192ba75f 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 6.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS04485 3cb0052777571757c658d303192ba75f 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 6.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS04485 3cb0052777571757c658d303192ba75f 262 PIRSF PIRSF000094 9 262 2.0E-93 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 NHAM_RS00515 e3543d5f97e3bf5148b5478cfa29cbea 286 PANTHER PTHR13696:SF52 22 285 3.4E-90 T 22-04-2016 NHAM_RS00515 e3543d5f97e3bf5148b5478cfa29cbea 286 PANTHER PTHR13696 22 285 3.4E-90 T 22-04-2016 NHAM_RS00515 e3543d5f97e3bf5148b5478cfa29cbea 286 SUPERFAMILY SSF52540 22 282 7.27E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00515 e3543d5f97e3bf5148b5478cfa29cbea 286 Gene3D G3DSA:3.40.50.300 23 282 1.3E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00515 e3543d5f97e3bf5148b5478cfa29cbea 286 Pfam PF13614 AAA domain 23 204 5.5E-58 T 22-04-2016 IPR025669 AAA domain NHAM_RS19345 07a1cb3d438bd3ccb8ee614d0ca7045f 459 Gene3D G3DSA:1.20.1250.20 333 448 1.9E-7 T 22-04-2016 NHAM_RS19345 07a1cb3d438bd3ccb8ee614d0ca7045f 459 Gene3D G3DSA:1.20.1250.20 27 230 5.4E-15 T 22-04-2016 NHAM_RS19345 07a1cb3d438bd3ccb8ee614d0ca7045f 459 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 173 185 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 NHAM_RS19345 07a1cb3d438bd3ccb8ee614d0ca7045f 459 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 102 126 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 NHAM_RS19345 07a1cb3d438bd3ccb8ee614d0ca7045f 459 PANTHER PTHR11654:SF119 85 459 3.2E-130 T 22-04-2016 NHAM_RS19345 07a1cb3d438bd3ccb8ee614d0ca7045f 459 PANTHER PTHR11654:SF119 12 59 3.2E-130 T 22-04-2016 NHAM_RS19345 07a1cb3d438bd3ccb8ee614d0ca7045f 459 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 14 226 2.3E-52 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 NHAM_RS19345 07a1cb3d438bd3ccb8ee614d0ca7045f 459 SUPERFAMILY SSF103473 11 450 1.96E-32 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS19345 07a1cb3d438bd3ccb8ee614d0ca7045f 459 PANTHER PTHR11654 85 459 3.2E-130 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 NHAM_RS19345 07a1cb3d438bd3ccb8ee614d0ca7045f 459 PANTHER PTHR11654 12 59 3.2E-130 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 NHAM_RS19345 07a1cb3d438bd3ccb8ee614d0ca7045f 459 Pfam PF00854 POT family 242 422 2.2E-29 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 NHAM_RS19345 07a1cb3d438bd3ccb8ee614d0ca7045f 459 Pfam PF00854 POT family 114 223 9.3E-29 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 NHAM_RS00975 dcf7df90015647ee51909820c8410ef5 220 PANTHER PTHR33751 26 213 9.6E-53 T 22-04-2016 NHAM_RS00975 dcf7df90015647ee51909820c8410ef5 220 Gene3D G3DSA:1.10.760.10 117 208 6.5E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS00975 dcf7df90015647ee51909820c8410ef5 220 Gene3D G3DSA:1.10.760.10 18 104 2.1E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS00975 dcf7df90015647ee51909820c8410ef5 220 PRINTS PR00605 Class IC cytochrome C signature 182 204 8.9E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 NHAM_RS00975 dcf7df90015647ee51909820c8410ef5 220 PRINTS PR00605 Class IC cytochrome C signature 37 48 8.9E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 NHAM_RS00975 dcf7df90015647ee51909820c8410ef5 220 PANTHER PTHR33751:SF3 26 213 9.6E-53 T 22-04-2016 NHAM_RS00975 dcf7df90015647ee51909820c8410ef5 220 SUPERFAMILY SSF46626 116 207 8.44E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS00975 dcf7df90015647ee51909820c8410ef5 220 Pfam PF00034 Cytochrome c 121 206 1.6E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS00975 dcf7df90015647ee51909820c8410ef5 220 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 34 101 5.5E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS00975 dcf7df90015647ee51909820c8410ef5 220 PIRSF PIRSF000005 1 209 1.2E-60 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 NHAM_RS00975 dcf7df90015647ee51909820c8410ef5 220 SUPERFAMILY SSF46626 37 107 1.89E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 SMART SM01382 124 252 8.2E-89 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 PIRSF PIRSF002158 4 275 3.6E-100 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.8E-32 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 277 45.829 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 SUPERFAMILY SSF50104 126 272 1.14E-60 T 22-04-2016 IPR008991 Translation protein SH3-like domain NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 Gene3D G3DSA:2.40.50.140 1 114 3.2E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 SUPERFAMILY SSF50249 2 125 3.77E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 PANTHER PTHR13691:SF5 1 277 3.9E-136 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 3.9E-56 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 4.2E-123 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 SMART SM01383 42 118 1.0E-43 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 Gene3D G3DSA:2.30.30.30 119 195 5.9E-33 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 Gene3D G3DSA:4.10.950.10 196 274 3.6E-33 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 NHAM_RS07925 37b46e73ca525f247a8d116cafc3f306 277 PANTHER PTHR13691 1 277 3.9E-136 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08860 3a5d1931d9bfaeff052a18c1d5f1fa1c 281 SUPERFAMILY SSF51366 12 262 2.0E-86 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NHAM_RS08860 3a5d1931d9bfaeff052a18c1d5f1fa1c 281 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 36.386 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 NHAM_RS08860 3a5d1931d9bfaeff052a18c1d5f1fa1c 281 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 NHAM_RS08860 3a5d1931d9bfaeff052a18c1d5f1fa1c 281 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 260 7.2E-94 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 NHAM_RS08860 3a5d1931d9bfaeff052a18c1d5f1fa1c 281 PANTHER PTHR22854:SF2 1 262 3.2E-107 T 22-04-2016 NHAM_RS08860 3a5d1931d9bfaeff052a18c1d5f1fa1c 281 Gene3D G3DSA:3.20.20.70 3 262 1.2E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS08860 3a5d1931d9bfaeff052a18c1d5f1fa1c 281 PANTHER PTHR22854 1 262 3.2E-107 T 22-04-2016 NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 PANTHER PTHR24322:SF320 157 189 1.3E-45 T 22-04-2016 NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 PANTHER PTHR24322:SF320 12 141 1.3E-45 T 22-04-2016 NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 Pfam PF00106 short chain dehydrogenase 9 200 6.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 SUPERFAMILY SSF51735 2 238 6.59E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 193 0.003 T 22-04-2016 NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.0E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.0E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 PANTHER PTHR24322 157 189 1.3E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 PANTHER PTHR24322 12 141 1.3E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 Gene3D G3DSA:3.40.50.720 2 233 6.8E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 4.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS08615 a1a14b6d5f3203b2215beddf9d51222a 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS05305 cfabc2c6f700bcec7c0c121cba655b19 168 SUPERFAMILY SSF47741 100 166 3.53E-30 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NHAM_RS05305 cfabc2c6f700bcec7c0c121cba655b19 168 SUPERFAMILY SSF54292 18 104 1.14E-27 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS05305 cfabc2c6f700bcec7c0c121cba655b19 168 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 55 63 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NHAM_RS05305 cfabc2c6f700bcec7c0c121cba655b19 168 PANTHER PTHR11908 18 151 1.8E-42 T 22-04-2016 NHAM_RS05305 cfabc2c6f700bcec7c0c121cba655b19 168 Pfam PF01799 [2Fe-2S] binding domain 89 161 2.8E-30 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NHAM_RS05305 cfabc2c6f700bcec7c0c121cba655b19 168 Gene3D G3DSA:1.10.150.120 91 166 4.0E-33 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NHAM_RS05305 cfabc2c6f700bcec7c0c121cba655b19 168 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 22 70 6.0E-9 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS05305 cfabc2c6f700bcec7c0c121cba655b19 168 Gene3D G3DSA:3.10.20.30 18 90 9.6E-33 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS12395 c235ab47fd7c2e0baf74365cb7059a29 218 Gene3D G3DSA:3.40.30.10 12 93 5.3E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS12395 c235ab47fd7c2e0baf74365cb7059a29 218 Gene3D G3DSA:1.20.1050.10 94 209 6.5E-41 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS12395 c235ab47fd7c2e0baf74365cb7059a29 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 11 82 1.1E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NHAM_RS12395 c235ab47fd7c2e0baf74365cb7059a29 218 PANTHER PTHR11260:SF144 9 200 4.0E-64 T 22-04-2016 NHAM_RS12395 c235ab47fd7c2e0baf74365cb7059a29 218 PANTHER PTHR11260 9 200 4.0E-64 T 22-04-2016 NHAM_RS12395 c235ab47fd7c2e0baf74365cb7059a29 218 SUPERFAMILY SSF47616 85 203 5.22E-18 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS12395 c235ab47fd7c2e0baf74365cb7059a29 218 Pfam PF13410 Glutathione S-transferase, C-terminal domain 130 201 9.0E-6 T 22-04-2016 NHAM_RS12395 c235ab47fd7c2e0baf74365cb7059a29 218 SUPERFAMILY SSF52833 5 88 3.17E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 Pfam PF00117 Glutamine amidotransferase class-I 211 388 1.1E-46 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 PRINTS PR00096 Glutamine amidotransferase superfamily signature 365 378 9.8E-12 T 22-04-2016 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 PRINTS PR00096 Glutamine amidotransferase superfamily signature 280 291 9.8E-12 T 22-04-2016 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 PRINTS PR00096 Glutamine amidotransferase superfamily signature 251 260 9.8E-12 T 22-04-2016 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 SUPERFAMILY SSF52317 173 393 8.73E-61 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 17 147 8.5E-47 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 17 391 8.6E-134 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 SMART SM01097 15 149 1.8E-79 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 Gene3D G3DSA:3.50.30.20 17 161 2.1E-53 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 Gene3D G3DSA:3.40.50.880 172 393 1.9E-77 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 SUPERFAMILY SSF52021 16 164 1.44E-50 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 209 223 7.5E-37 T 22-04-2016 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 322 333 7.5E-37 T 22-04-2016 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 248 262 7.5E-37 T 22-04-2016 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 297 314 7.5E-37 T 22-04-2016 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 296 7.5E-37 T 22-04-2016 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 PRINTS PR00097 Anthranilate synthase component II signature 251 260 4.4E-6 T 22-04-2016 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 PRINTS PR00097 Anthranilate synthase component II signature 365 378 4.4E-6 T 22-04-2016 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 PRINTS PR00097 Anthranilate synthase component II signature 280 291 4.4E-6 T 22-04-2016 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 15 394 46.868 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 NHAM_RS14720 4222655222f4055e5ab18d54f884b2e4 396 PANTHER PTHR11405 15 395 3.5E-207 T 22-04-2016 NHAM_RS16440 a6de324acbc0f6eb0939d05cbc5f3b28 125 Pfam PF06823 Protein of unknown function (DUF1236) 61 125 9.2E-21 T 22-04-2016 IPR009642 Protein of unknown function DUF1236 NHAM_RS17285 ba14abd4519408056cc95bcda69ddac9 710 PANTHER PTHR30161 11 710 0.0 T 22-04-2016 NHAM_RS17285 ba14abd4519408056cc95bcda69ddac9 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 167 5.0E-53 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NHAM_RS17285 ba14abd4519408056cc95bcda69ddac9 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 47 60 5.0E-53 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NHAM_RS17285 ba14abd4519408056cc95bcda69ddac9 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 188 5.0E-53 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NHAM_RS17285 ba14abd4519408056cc95bcda69ddac9 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 251 265 5.0E-53 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NHAM_RS17285 ba14abd4519408056cc95bcda69ddac9 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 200 217 5.0E-53 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NHAM_RS17285 ba14abd4519408056cc95bcda69ddac9 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 84 103 5.0E-53 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NHAM_RS17285 ba14abd4519408056cc95bcda69ddac9 710 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 30 710 4.3E-274 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 NHAM_RS17285 ba14abd4519408056cc95bcda69ddac9 710 PANTHER PTHR30161:SF1 11 710 0.0 T 22-04-2016 NHAM_RS17285 ba14abd4519408056cc95bcda69ddac9 710 Pfam PF00771 FHIPEP family 40 701 5.1E-259 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NHAM_RS17285 ba14abd4519408056cc95bcda69ddac9 710 PIRSF PIRSF005419 18 710 4.7E-239 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NHAM_RS16315 1b3569f5b16ea3a21750f79e43bb4a2e 463 PANTHER PTHR30624:SF1 15 463 4.5E-147 T 22-04-2016 NHAM_RS16315 1b3569f5b16ea3a21750f79e43bb4a2e 463 PANTHER PTHR30624 15 463 4.5E-147 T 22-04-2016 NHAM_RS16315 1b3569f5b16ea3a21750f79e43bb4a2e 463 SUPERFAMILY SSF111283 23 463 6.54E-126 T 22-04-2016 NHAM_RS16315 1b3569f5b16ea3a21750f79e43bb4a2e 463 Pfam PF01523 Putative modulator of DNA gyrase 42 331 1.3E-49 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS11835 b499c953914fef2bdc3efd923e61fef8 134 Gene3D G3DSA:2.60.300.12 21 115 5.2E-33 T 22-04-2016 IPR000361 FeS cluster biogenesis NHAM_RS11835 b499c953914fef2bdc3efd923e61fef8 134 Pfam PF01521 Iron-sulphur cluster biosynthesis 22 123 1.6E-16 T 22-04-2016 IPR000361 FeS cluster biogenesis NHAM_RS11835 b499c953914fef2bdc3efd923e61fef8 134 PANTHER PTHR10072 15 124 5.3E-47 T 22-04-2016 NHAM_RS11835 b499c953914fef2bdc3efd923e61fef8 134 SUPERFAMILY SSF89360 18 113 2.75E-28 T 22-04-2016 IPR000361 FeS cluster biogenesis NHAM_RS11835 b499c953914fef2bdc3efd923e61fef8 134 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 23 125 1.5E-34 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 NHAM_RS17270 f35b9d8492a34dcad951bcc1ef48d85e 412 Pfam PF00589 Phage integrase family 224 370 1.4E-9 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS17270 f35b9d8492a34dcad951bcc1ef48d85e 412 Gene3D G3DSA:1.10.443.10 176 384 3.2E-19 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS17270 f35b9d8492a34dcad951bcc1ef48d85e 412 SUPERFAMILY SSF56349 81 380 2.0E-25 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS17270 f35b9d8492a34dcad951bcc1ef48d85e 412 PANTHER PTHR30349 212 401 4.0E-20 T 22-04-2016 NHAM_RS17270 f35b9d8492a34dcad951bcc1ef48d85e 412 PANTHER PTHR30349 98 191 4.0E-20 T 22-04-2016 NHAM_RS17270 f35b9d8492a34dcad951bcc1ef48d85e 412 PANTHER PTHR30349 45 71 4.0E-20 T 22-04-2016 NHAM_RS17270 f35b9d8492a34dcad951bcc1ef48d85e 412 PANTHER PTHR30349:SF20 212 401 4.0E-20 T 22-04-2016 NHAM_RS17270 f35b9d8492a34dcad951bcc1ef48d85e 412 PANTHER PTHR30349:SF20 98 191 4.0E-20 T 22-04-2016 NHAM_RS17270 f35b9d8492a34dcad951bcc1ef48d85e 412 PANTHER PTHR30349:SF20 45 71 4.0E-20 T 22-04-2016 NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 PANTHER PTHR23135:SF2 1 461 1.0E-142 T 22-04-2016 NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 117 140 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 Gene3D G3DSA:3.90.190.20 321 456 1.3E-41 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 458 2.2E-109 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 PANTHER PTHR23135 1 461 1.0E-142 T 22-04-2016 NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 SUPERFAMILY SSF51984 6 98 3.92E-12 T 22-04-2016 NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 SUPERFAMILY SSF53623 108 317 2.09E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 Gene3D G3DSA:3.40.1190.10 98 319 1.1E-59 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 Gene3D G3DSA:3.40.50.720 7 97 9.5E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 Pfam PF08245 Mur ligase middle domain 119 300 2.4E-33 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 SUPERFAMILY SSF53244 319 459 2.43E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 459 31.937 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS06515 60e76bef9a3c2560f81f870505612d7d 466 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 359 7.5E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 Pfam PF13662 Toprim domain 258 323 1.3E-15 T 22-04-2016 IPR006171 Toprim domain NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 Pfam PF01807 CHC2 zinc finger 5 97 4.8E-29 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 PANTHER PTHR30313 1 405 1.5E-125 T 22-04-2016 NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 SMART SM00400 34 88 2.2E-21 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 Gene3D G3DSA:3.90.580.10 1 98 6.0E-36 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 250 9.1E-39 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 Hamap MF_00974 DNA primase [dnaG]. 2 595 24.842 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 SMART SM00493 257 328 1.8E-13 T 22-04-2016 IPR006171 Toprim domain NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 SUPERFAMILY SSF57783 1 97 7.99E-34 T 22-04-2016 NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 Gene3D G3DSA:3.40.1360.10 239 363 1.4E-42 T 22-04-2016 NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 SUPERFAMILY SSF56731 111 411 5.36E-97 T 22-04-2016 NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 Gene3D G3DSA:3.90.980.10 112 238 3.8E-39 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal NHAM_RS14705 b4a78b35156242de81e12c67e745fb44 633 TIGRFAM TIGR01391 dnaG: DNA primase 3 411 2.6E-131 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 NHAM_RS15075 3c4b551a3efac105b0ce0a973edd8f14 149 Gene3D G3DSA:3.10.180.10 7 131 1.1E-11 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS15075 3c4b551a3efac105b0ce0a973edd8f14 149 SUPERFAMILY SSF54593 8 132 5.64E-15 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS08975 327fc15220794307e7a64f4663eea84e 110 PANTHER PTHR10072 6 110 8.3E-49 T 22-04-2016 NHAM_RS08975 327fc15220794307e7a64f4663eea84e 110 SUPERFAMILY SSF89360 5 99 2.35E-29 T 22-04-2016 IPR000361 FeS cluster biogenesis NHAM_RS08975 327fc15220794307e7a64f4663eea84e 110 Gene3D G3DSA:2.60.300.12 3 96 9.9E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis NHAM_RS08975 327fc15220794307e7a64f4663eea84e 110 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 105 1.1E-17 T 22-04-2016 IPR000361 FeS cluster biogenesis NHAM_RS08975 327fc15220794307e7a64f4663eea84e 110 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site NHAM_RS08975 327fc15220794307e7a64f4663eea84e 110 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 6 109 1.0E-35 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 NHAM_RS08890 507e7474d9a02a80c2f6e21616432e05 287 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 23 279 2.3E-121 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 NHAM_RS08890 507e7474d9a02a80c2f6e21616432e05 287 SUPERFAMILY SSF51569 10 279 2.66E-104 T 22-04-2016 NHAM_RS08890 507e7474d9a02a80c2f6e21616432e05 287 Gene3D G3DSA:3.20.20.70 22 279 9.9E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS08890 507e7474d9a02a80c2f6e21616432e05 287 PANTHER PTHR21057:SF2 9 282 1.9E-160 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 NHAM_RS08890 507e7474d9a02a80c2f6e21616432e05 287 Pfam PF00793 DAHP synthetase I family 15 267 1.7E-69 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 NHAM_RS08890 507e7474d9a02a80c2f6e21616432e05 287 PANTHER PTHR21057 9 282 1.9E-160 T 22-04-2016 NHAM_RS08890 507e7474d9a02a80c2f6e21616432e05 287 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 18 281 53.678 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 NHAM_RS11795 b886854e9a42fac967fdfbfcc732bb6c 176 PANTHER PTHR30353:SF5 1 176 1.5E-54 T 22-04-2016 NHAM_RS11795 b886854e9a42fac967fdfbfcc732bb6c 176 Pfam PF09335 SNARE associated Golgi protein 39 163 7.6E-16 T 22-04-2016 IPR032816 SNARE associated Golgi protein NHAM_RS11795 b886854e9a42fac967fdfbfcc732bb6c 176 PANTHER PTHR30353 1 176 1.5E-54 T 22-04-2016 IPR032818 DedA family NHAM_RS07295 16824bc37c788dd970bb6e02c9771a48 602 Pfam PF06662 D-glucuronyl C5-epimerase C-terminus 160 337 7.8E-49 T 22-04-2016 IPR010598 D-glucuronyl C5-epimerase GO:0006024|GO:0016021|GO:0016857 KEGG: 00534+5.1.3.17|MetaCyc: PWY-6558|UniPathway: UPA00756|UniPathway: UPA00862 NHAM_RS07295 16824bc37c788dd970bb6e02c9771a48 602 SUPERFAMILY SSF48208 122 299 7.4E-11 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 4.9E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 4.9E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 4.9E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 Pfam PF01037 Lrp/AsnC ligand binding domain 73 143 6.5E-19 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 Gene3D G3DSA:1.10.10.10 4 55 1.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 Gene3D G3DSA:3.30.70.920 58 141 1.2E-25 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 PANTHER PTHR30154:SF22 2 154 4.1E-102 T 22-04-2016 NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 SUPERFAMILY SSF46785 5 65 8.14E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 SMART SM00344 5 114 6.6E-42 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 SUPERFAMILY SSF54909 65 153 2.01E-18 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 2.0E-22 T 22-04-2016 NHAM_RS14780 9c7b2c5e4b47e80046abc71373ad2257 159 PANTHER PTHR30154 2 154 4.1E-102 T 22-04-2016 NHAM_RS04620 de49214a18dc7becc93d5030f8c6e461 537 Gene3D G3DSA:1.10.443.10 445 516 9.1E-4 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS04620 de49214a18dc7becc93d5030f8c6e461 537 SUPERFAMILY SSF56349 332 529 1.71E-8 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS11015 6d4e1b7c2372a17c0efe6b1bb10f7276 80 SUPERFAMILY SSF101801 3 76 5.62E-18 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) NHAM_RS11015 6d4e1b7c2372a17c0efe6b1bb10f7276 80 PANTHER PTHR41277 1 80 1.1E-28 T 22-04-2016 NHAM_RS11015 6d4e1b7c2372a17c0efe6b1bb10f7276 80 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 4 73 5.6E-19 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) NHAM_RS11015 6d4e1b7c2372a17c0efe6b1bb10f7276 80 PRINTS PR00956 Flagellar motor switch protein FliN signature 20 36 7.2E-11 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 NHAM_RS11015 6d4e1b7c2372a17c0efe6b1bb10f7276 80 PRINTS PR00956 Flagellar motor switch protein FliN signature 3 19 7.2E-11 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 NHAM_RS11015 6d4e1b7c2372a17c0efe6b1bb10f7276 80 PRINTS PR00956 Flagellar motor switch protein FliN signature 36 49 7.2E-11 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 NHAM_RS11015 6d4e1b7c2372a17c0efe6b1bb10f7276 80 PRINTS PR00956 Flagellar motor switch protein FliN signature 49 64 7.2E-11 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 NHAM_RS11015 6d4e1b7c2372a17c0efe6b1bb10f7276 80 Gene3D G3DSA:2.30.330.10 3 75 1.1E-19 T 22-04-2016 NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 PANTHER PTHR10804:SF105 1 194 2.1E-258 T 22-04-2016 NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 PANTHER PTHR10804 1 194 2.1E-258 T 22-04-2016 NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 Gene3D G3DSA:3.90.230.10 316 569 1.2E-65 T 22-04-2016 IPR000994 Peptidase M24, structural domain NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 Pfam PF16188 C-terminal region of peptidase_M24 548 601 5.4E-16 T 22-04-2016 IPR032416 Peptidase M24, C-terminal domain NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 Pfam PF00557 Metallopeptidase family M24 326 538 2.6E-51 T 22-04-2016 IPR000994 Peptidase M24, structural domain NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 PANTHER PTHR10804 298 602 2.1E-258 T 22-04-2016 NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 Pfam PF01321 Creatinase/Prolidase N-terminal domain 21 153 5.6E-16 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 PANTHER PTHR10804:SF105 298 602 2.1E-258 T 22-04-2016 NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 Gene3D G3DSA:3.40.350.10 184 289 5.4E-8 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 SUPERFAMILY SSF55920 319 568 4.32E-64 T 22-04-2016 IPR000994 Peptidase M24, structural domain NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 Pfam PF16189 Creatinase/Prolidase N-terminal domain 162 322 1.8E-34 T 22-04-2016 NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 Gene3D G3DSA:3.40.350.10 19 152 2.4E-17 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 SUPERFAMILY SSF53092 21 151 5.58E-9 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal NHAM_RS14075 6ea83ab45426937975fbf917db639ea1 602 SUPERFAMILY SSF53092 178 294 1.52E-7 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal NHAM_RS07730 27924c636d51012deb17a82c2acf2248 390 PANTHER PTHR30469:SF0 1 384 2.9E-166 T 22-04-2016 NHAM_RS07730 27924c636d51012deb17a82c2acf2248 390 Gene3D G3DSA:2.40.50.100 179 212 5.5E-20 T 22-04-2016 NHAM_RS07730 27924c636d51012deb17a82c2acf2248 390 Gene3D G3DSA:2.40.50.100 73 106 5.5E-20 T 22-04-2016 NHAM_RS07730 27924c636d51012deb17a82c2acf2248 390 PANTHER PTHR30469 1 384 2.9E-166 T 22-04-2016 NHAM_RS07730 27924c636d51012deb17a82c2acf2248 390 SUPERFAMILY SSF111369 64 296 8.24E-54 T 22-04-2016 NHAM_RS07730 27924c636d51012deb17a82c2acf2248 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 72 290 9.5E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS07730 27924c636d51012deb17a82c2acf2248 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 372 4.4E-75 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS15945 ad1042bf7801b91eae7aaa02dd68c6fb 326 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 3.0E-47 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NHAM_RS15945 ad1042bf7801b91eae7aaa02dd68c6fb 326 Gene3D G3DSA:3.40.50.970 2 195 3.0E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS15945 ad1042bf7801b91eae7aaa02dd68c6fb 326 PANTHER PTHR11624 3 316 6.3E-138 T 22-04-2016 IPR033247 Transketolase family NHAM_RS15945 ad1042bf7801b91eae7aaa02dd68c6fb 326 SMART SM00861 4 179 5.1E-63 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain NHAM_RS15945 ad1042bf7801b91eae7aaa02dd68c6fb 326 SUPERFAMILY SSF52518 2 204 1.66E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS15945 ad1042bf7801b91eae7aaa02dd68c6fb 326 SUPERFAMILY SSF52922 190 321 6.41E-41 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NHAM_RS15945 ad1042bf7801b91eae7aaa02dd68c6fb 326 Gene3D G3DSA:3.40.50.920 198 318 1.1E-45 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NHAM_RS15945 ad1042bf7801b91eae7aaa02dd68c6fb 326 Pfam PF02780 Transketolase, C-terminal domain 198 315 1.7E-39 T 22-04-2016 IPR033248 Transketolase, C-terminal domain NHAM_RS15945 ad1042bf7801b91eae7aaa02dd68c6fb 326 PANTHER PTHR11624:SF79 3 316 6.3E-138 T 22-04-2016 NHAM_RS04830 9d1004d3d17e4dd85069aea6ea4e3f71 206 PANTHER PTHR22912:SF1 1 165 4.2E-59 T 22-04-2016 NHAM_RS04830 9d1004d3d17e4dd85069aea6ea4e3f71 206 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 160 1.7E-8 T 22-04-2016 NHAM_RS04830 9d1004d3d17e4dd85069aea6ea4e3f71 206 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 93 102 1.7E-8 T 22-04-2016 NHAM_RS04830 9d1004d3d17e4dd85069aea6ea4e3f71 206 Gene3D G3DSA:3.50.50.60 1 97 2.4E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS04830 9d1004d3d17e4dd85069aea6ea4e3f71 206 PANTHER PTHR22912 1 165 4.2E-59 T 22-04-2016 NHAM_RS04830 9d1004d3d17e4dd85069aea6ea4e3f71 206 SUPERFAMILY SSF51905 1 166 1.88E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS04830 9d1004d3d17e4dd85069aea6ea4e3f71 206 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 164 1.3E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS04830 9d1004d3d17e4dd85069aea6ea4e3f71 206 Gene3D G3DSA:3.50.50.60 98 165 7.2E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS04830 9d1004d3d17e4dd85069aea6ea4e3f71 206 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 90 108 2.9E-8 T 22-04-2016 NHAM_RS04830 9d1004d3d17e4dd85069aea6ea4e3f71 206 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 2.9E-8 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 Pfam PF00425 chorismate binding enzyme 417 672 1.8E-86 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PANTHER PTHR11236:SF18 1 680 3.2E-232 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 1.4E-12 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.4E-12 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 1.4E-12 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PRINTS PR00097 Anthranilate synthase component II signature 102 110 7.0E-30 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PRINTS PR00097 Anthranilate synthase component II signature 3 17 7.0E-30 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PRINTS PR00097 Anthranilate synthase component II signature 166 179 7.0E-30 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PRINTS PR00097 Anthranilate synthase component II signature 49 58 7.0E-30 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PRINTS PR00097 Anthranilate synthase component II signature 122 134 7.0E-30 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PRINTS PR00097 Anthranilate synthase component II signature 77 88 7.0E-30 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 323 674 2.9E-102 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 Pfam PF00117 Glutamine amidotransferase class-I 5 186 1.4E-37 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 SUPERFAMILY SSF52317 2 190 1.41E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS05325 5625179374795e5566d93db70db0db23 704 Gene3D G3DSA:3.40.50.880 2 188 1.8E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 1.6E-7 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 46 60 1.6E-7 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 SUPERFAMILY SSF56322 222 680 2.35E-122 T 22-04-2016 IPR005801 ADC synthase GO:0009058 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 1.9E-45 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 PANTHER PTHR11236 1 680 3.2E-232 T 22-04-2016 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 Pfam PF04715 Anthranilate synthase component I, N terminal region 238 367 3.9E-11 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 NHAM_RS05325 5625179374795e5566d93db70db0db23 704 Gene3D G3DSA:3.60.120.10 225 680 5.3E-135 T 22-04-2016 IPR005801 ADC synthase GO:0009058 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 Pfam PF03144 Elongation factor Tu domain 2 322 389 7.7E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 Pfam PF14492 Elongation Factor G, domain II 402 475 2.4E-31 T 22-04-2016 IPR009022 Elongation factor G, III-V domain NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 SUPERFAMILY SSF52540 7 281 2.4E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 Gene3D G3DSA:3.30.230.10 482 596 1.2E-46 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 Gene3D G3DSA:2.40.30.10 303 402 6.5E-37 T 22-04-2016 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 Pfam PF00009 Elongation factor Tu GTP binding domain 9 281 6.3E-68 T 22-04-2016 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 106.25 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 Gene3D G3DSA:3.40.50.300 6 286 3.7E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 SUPERFAMILY SSF54211 477 596 2.2E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 Pfam PF00679 Elongation factor G C-terminus 598 682 5.0E-29 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 180 7.3E-37 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.0E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 PRINTS PR00315 GTP-binding elongation factor signature 130 139 5.0E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 PRINTS PR00315 GTP-binding elongation factor signature 94 105 5.0E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.0E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 PRINTS PR00315 GTP-binding elongation factor signature 78 88 5.0E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 688 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 SMART SM00838 598 685 2.0E-52 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 SMART SM00889 478 596 3.5E-62 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 Gene3D G3DSA:3.30.70.240 597 682 1.1E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 SUPERFAMILY SSF54980 400 478 4.32E-22 T 22-04-2016 IPR009022 Elongation factor G, III-V domain NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 PANTHER PTHR23115 301 689 0.0 T 22-04-2016 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 PANTHER PTHR23115 254 282 0.0 T 22-04-2016 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 PANTHER PTHR23115 7 177 0.0 T 22-04-2016 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 PANTHER PTHR23115:SF66 301 689 0.0 T 22-04-2016 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 PANTHER PTHR23115:SF66 254 282 0.0 T 22-04-2016 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 PANTHER PTHR23115:SF66 7 177 0.0 T 22-04-2016 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 Gene3D G3DSA:3.30.70.870 403 478 1.9E-35 T 22-04-2016 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 SUPERFAMILY SSF50447 264 402 1.48E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 Pfam PF03764 Elongation factor G, domain IV 477 595 1.6E-43 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NHAM_RS07895 d3b1a43f6d84144bb64f63fbcb23c01c 690 SUPERFAMILY SSF54980 598 687 8.15E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1105 1132 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 Pfam PF00384 Molybdopterin oxidoreductase 91 805 2.3E-119 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 Gene3D G3DSA:3.40.50.740 83 236 5.8E-50 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 Gene3D G3DSA:3.40.50.740 552 636 3.8E-46 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 Gene3D G3DSA:3.40.50.740 671 751 3.8E-46 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 Gene3D G3DSA:3.40.228.10 237 305 1.1E-45 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 Gene3D G3DSA:3.40.228.10 507 551 1.1E-45 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 11 1214 0.0 T 22-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 SUPERFAMILY SSF53706 6 1055 1.15E-295 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 PANTHER PTHR11615 976 1209 2.1E-283 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 PANTHER PTHR11615 672 808 2.1E-283 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 PANTHER PTHR11615 825 849 2.1E-283 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 PANTHER PTHR11615 17 395 2.1E-283 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 SMART SM00926 26 88 0.0015 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 Gene3D G3DSA:3.90.55.10 752 806 1.1E-5 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 Pfam PF01568 Molydopterin dinucleotide binding domain 1067 1176 2.4E-20 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 Gene3D G3DSA:2.20.25.90 35 81 8.5E-28 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 PANTHER PTHR11615:SF35 976 1209 2.1E-283 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 PANTHER PTHR11615:SF35 672 808 2.1E-283 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 PANTHER PTHR11615:SF35 825 849 2.1E-283 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 PANTHER PTHR11615:SF35 17 395 2.1E-283 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 Gene3D G3DSA:2.40.40.20 1036 1212 8.8E-39 T 22-04-2016 NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 SUPERFAMILY SSF50692 1064 1212 3.39E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain NHAM_RS17695 df01a891b9545826cb09601098f0fb1d 1214 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 31 49 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 NHAM_RS11575 544669a4fd599fd3dd35fee382efd464 403 PANTHER PTHR33055 37 329 4.7E-27 T 22-04-2016 NHAM_RS11575 544669a4fd599fd3dd35fee382efd464 403 PANTHER PTHR33055:SF3 37 329 4.7E-27 T 22-04-2016 NHAM_RS11575 544669a4fd599fd3dd35fee382efd464 403 Pfam PF02371 Transposase IS116/IS110/IS902 family 257 331 1.7E-20 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS11575 544669a4fd599fd3dd35fee382efd464 403 Pfam PF01548 Transposase 41 187 1.1E-13 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS15685 544669a4fd599fd3dd35fee382efd464 403 PANTHER PTHR33055 37 329 4.7E-27 T 22-04-2016 NHAM_RS15685 544669a4fd599fd3dd35fee382efd464 403 PANTHER PTHR33055:SF3 37 329 4.7E-27 T 22-04-2016 NHAM_RS15685 544669a4fd599fd3dd35fee382efd464 403 Pfam PF02371 Transposase IS116/IS110/IS902 family 257 331 1.7E-20 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS15685 544669a4fd599fd3dd35fee382efd464 403 Pfam PF01548 Transposase 41 187 1.1E-13 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS00635 50fbfc2acd389509353020b92f585b2c 107 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 3 89 18.481 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 NHAM_RS00635 50fbfc2acd389509353020b92f585b2c 107 SUPERFAMILY SSF101386 6 92 1.51E-21 T 22-04-2016 NHAM_RS00635 50fbfc2acd389509353020b92f585b2c 107 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 92 1.9E-13 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 NHAM_RS00635 50fbfc2acd389509353020b92f585b2c 107 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 7 86 2.6E-28 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 NHAM_RS00635 50fbfc2acd389509353020b92f585b2c 107 PANTHER PTHR21256 1 107 1.4E-38 T 22-04-2016 NHAM_RS11120 0cfd7eeab590e4641c2071d44c512c70 395 Pfam PF00155 Aminotransferase class I and II 44 390 1.2E-52 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NHAM_RS11120 0cfd7eeab590e4641c2071d44c512c70 395 PANTHER PTHR11751 18 394 9.5E-202 T 22-04-2016 NHAM_RS11120 0cfd7eeab590e4641c2071d44c512c70 395 PANTHER PTHR11751:SF401 18 394 9.5E-202 T 22-04-2016 NHAM_RS11120 0cfd7eeab590e4641c2071d44c512c70 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 126 147 3.6E-11 T 22-04-2016 NHAM_RS11120 0cfd7eeab590e4641c2071d44c512c70 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 210 233 3.6E-11 T 22-04-2016 NHAM_RS11120 0cfd7eeab590e4641c2071d44c512c70 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 104 124 3.6E-11 T 22-04-2016 NHAM_RS11120 0cfd7eeab590e4641c2071d44c512c70 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 174 198 3.6E-11 T 22-04-2016 NHAM_RS11120 0cfd7eeab590e4641c2071d44c512c70 395 Gene3D G3DSA:3.90.1150.10 265 394 3.4E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS11120 0cfd7eeab590e4641c2071d44c512c70 395 Gene3D G3DSA:3.40.640.10 57 264 6.2E-59 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS11120 0cfd7eeab590e4641c2071d44c512c70 395 SUPERFAMILY SSF53383 19 394 2.99E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 54 77 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 PANTHER PTHR10584 1 351 7.2E-120 T 22-04-2016 NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 PANTHER PTHR10584:SF159 1 351 7.2E-120 T 22-04-2016 NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 Gene3D G3DSA:3.40.1190.20 16 321 1.4E-66 T 22-04-2016 IPR029056 Ribokinase-like NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 10 322 2.3E-114 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 347 485 7.8E-62 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 Gene3D G3DSA:3.40.50.620 355 471 6.1E-33 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 356 421 5.4E-14 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 Pfam PF00294 pfkB family carbohydrate kinase 16 312 1.4E-41 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 SUPERFAMILY SSF53613 15 321 4.21E-58 T 22-04-2016 IPR029056 Ribokinase-like NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 Hamap MF_01603 Bifunctional protein HldE [hldE]. 7 488 40.472 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 Pfam PF01467 Cytidylyltransferase-like 359 449 2.4E-12 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NHAM_RS06630 5ecc01842fe808dbebad3406244f0dc7 489 SUPERFAMILY SSF52374 355 483 1.97E-22 T 22-04-2016 NHAM_RS18230 43326b4999b1f13eaef05b26526f6598 458 Pfam PF01943 Polysaccharide biosynthesis protein 41 302 1.8E-18 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 NHAM_RS18230 43326b4999b1f13eaef05b26526f6598 458 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 366 450 4.4E-13 T 22-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain NHAM_RS18230 43326b4999b1f13eaef05b26526f6598 458 PANTHER PTHR11206 241 446 2.9E-23 T 22-04-2016 NHAM_RS18230 43326b4999b1f13eaef05b26526f6598 458 PANTHER PTHR11206:SF90 241 446 2.9E-23 T 22-04-2016 NHAM_RS00230 85a66b748c6f4326ed0bb14b43d5ac83 448 Gene3D G3DSA:1.10.101.10 52 112 1.8E-7 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS00230 85a66b748c6f4326ed0bb14b43d5ac83 448 Pfam PF01471 Putative peptidoglycan binding domain 54 106 1.4E-6 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS00230 85a66b748c6f4326ed0bb14b43d5ac83 448 SUPERFAMILY SSF50494 225 400 5.97E-15 T 22-04-2016 IPR009003 Peptidase S1, PA clan NHAM_RS00230 85a66b748c6f4326ed0bb14b43d5ac83 448 SUPERFAMILY SSF47090 48 109 2.94E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS00230 85a66b748c6f4326ed0bb14b43d5ac83 448 Gene3D G3DSA:2.40.10.10 240 323 2.9E-5 T 22-04-2016 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 SUPERFAMILY SSF55785 32 144 6.6E-27 T 22-04-2016 IPR000014 PAS domain NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 SUPERFAMILY SSF52172 396 506 1.32E-25 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 SMART SM00448 395 503 1.8E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 376 4.2E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 322 4.2E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 336 4.2E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 357 4.2E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 Gene3D G3DSA:1.10.287.130 152 209 4.8E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 PANTHER PTHR24423 3 506 9.1E-177 T 22-04-2016 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 SMART SM00086 93 135 0.0011 T 22-04-2016 IPR001610 PAC motif NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 Gene3D G3DSA:3.40.50.2300 394 506 1.4E-28 T 22-04-2016 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 SMART SM00388 157 223 3.1E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 SUPERFAMILY SSF47384 150 221 2.75E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 SMART SM00387 264 379 2.7E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 Pfam PF13426 PAS domain 32 134 9.0E-15 T 22-04-2016 IPR000014 PAS domain NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 266 378 3.3E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 Pfam PF00072 Response regulator receiver domain 397 503 2.0E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 SUPERFAMILY SSF55874 213 376 9.82E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 142 1.0E-24 T 22-04-2016 IPR000014 PAS domain NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 SMART SM00091 19 86 2.4E-5 T 22-04-2016 IPR000014 PAS domain NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 PANTHER PTHR24423:SF544 3 506 9.1E-177 T 22-04-2016 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 Pfam PF00512 His Kinase A (phospho-acceptor) domain 157 222 1.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 Gene3D G3DSA:3.30.565.10 210 377 8.9E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17900 46e8f300a4296e38c45afba9b8b91535 508 Gene3D G3DSA:3.30.450.20 31 134 9.0E-24 T 22-04-2016 NHAM_RS10875 b43bc6d79d1ca8b4160826d47323a4c3 258 Pfam PF13751 Transposase DDE domain 177 252 9.1E-8 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS10365 bac88829653fbbe4948d96f6ce2d2e47 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 8.3E-25 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10365 bac88829653fbbe4948d96f6ce2d2e47 67 SMART SM00357 3 67 5.2E-23 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS10365 bac88829653fbbe4948d96f6ce2d2e47 67 PRINTS PR00050 Cold shock protein signature 40 58 3.7E-11 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10365 bac88829653fbbe4948d96f6ce2d2e47 67 PRINTS PR00050 Cold shock protein signature 4 19 3.7E-11 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10365 bac88829653fbbe4948d96f6ce2d2e47 67 PRINTS PR00050 Cold shock protein signature 25 34 3.7E-11 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10365 bac88829653fbbe4948d96f6ce2d2e47 67 PANTHER PTHR11544 2 66 7.6E-22 T 22-04-2016 NHAM_RS10365 bac88829653fbbe4948d96f6ce2d2e47 67 SUPERFAMILY SSF50249 2 65 3.86E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10365 bac88829653fbbe4948d96f6ce2d2e47 67 Gene3D G3DSA:2.40.50.140 2 66 9.9E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10365 bac88829653fbbe4948d96f6ce2d2e47 67 PIRSF PIRSF002599 1 67 5.3E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 NHAM_RS10365 bac88829653fbbe4948d96f6ce2d2e47 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site NHAM_RS11405 8778e9452ff49f8e9df5a134a8c9343e 171 Gene3D G3DSA:1.10.10.10 23 166 7.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS11405 8778e9452ff49f8e9df5a134a8c9343e 171 Pfam PF13463 Winged helix DNA-binding domain 56 120 4.0E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS11405 8778e9452ff49f8e9df5a134a8c9343e 171 SUPERFAMILY SSF46785 22 163 1.69E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS11405 8778e9452ff49f8e9df5a134a8c9343e 171 SMART SM00347 48 149 5.0E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS11405 8778e9452ff49f8e9df5a134a8c9343e 171 ProSitePatterns PS01117 MarR-type HTH domain signature. 86 120 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 Gene3D G3DSA:3.30.70.1430 554 649 3.2E-13 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 SUPERFAMILY SSF82693 42 131 1.88E-23 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 SUPERFAMILY SSF82866 292 489 1.06E-48 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 SUPERFAMILY SSF82714 183 264 1.06E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 Gene3D G3DSA:3.30.70.1440 793 820 2.9E-11 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 Gene3D G3DSA:3.30.70.1440 650 696 2.9E-11 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 PANTHER PTHR32063:SF28 1 1022 0.0 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 SUPERFAMILY SSF82866 782 1001 3.53E-40 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 Gene3D G3DSA:3.30.70.1430 42 141 9.0E-27 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 SUPERFAMILY SSF82693 552 649 4.45E-20 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 Pfam PF00873 AcrB/AcrD/AcrF family 4 1002 3.0E-271 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 PRINTS PR00702 Acriflavin resistance protein family signature 602 616 1.4E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.4E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.4E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.4E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.4E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 1.4E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.4E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.4E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.4E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 Gene3D G3DSA:3.30.2090.10 697 786 3.5E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 Gene3D G3DSA:1.10.3850.10 275 490 2.2E-58 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 Gene3D G3DSA:1.20.1640.10 821 1003 1.7E-42 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 SUPERFAMILY SSF82693 267 323 9.42E-21 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 SUPERFAMILY SSF82693 137 181 9.42E-21 T 22-04-2016 NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 Gene3D G3DSA:3.30.2090.10 183 264 8.2E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 SUPERFAMILY SSF82714 698 783 6.02E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS13830 80eefdde535c20d78c5e3193ec4c6adc 1029 PANTHER PTHR32063 1 1022 0.0 T 22-04-2016 NHAM_RS18460 ac40fccf0515343a1cb7cc857d5342bb 505 Gene3D G3DSA:3.40.50.980 18 165 8.3E-34 T 22-04-2016 NHAM_RS18460 ac40fccf0515343a1cb7cc857d5342bb 505 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 488 3.5E-14 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NHAM_RS18460 ac40fccf0515343a1cb7cc857d5342bb 505 PANTHER PTHR24096:SF206 1 496 1.2E-242 T 22-04-2016 NHAM_RS18460 ac40fccf0515343a1cb7cc857d5342bb 505 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 22-04-2016 IPR020845 AMP-binding, conserved site NHAM_RS18460 ac40fccf0515343a1cb7cc857d5342bb 505 Pfam PF00501 AMP-binding enzyme 18 404 8.2E-93 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NHAM_RS18460 ac40fccf0515343a1cb7cc857d5342bb 505 Gene3D G3DSA:3.40.50.980 166 314 8.4E-41 T 22-04-2016 NHAM_RS18460 ac40fccf0515343a1cb7cc857d5342bb 505 Gene3D G3DSA:2.30.38.10 319 394 1.6E-23 T 22-04-2016 NHAM_RS18460 ac40fccf0515343a1cb7cc857d5342bb 505 PANTHER PTHR24096 1 496 1.2E-242 T 22-04-2016 NHAM_RS18460 ac40fccf0515343a1cb7cc857d5342bb 505 Gene3D G3DSA:3.30.300.30 399 498 1.7E-28 T 22-04-2016 NHAM_RS18460 ac40fccf0515343a1cb7cc857d5342bb 505 SUPERFAMILY SSF56801 17 501 5.76E-140 T 22-04-2016 NHAM_RS18090 8a9e59e3f17eb31e48f07c177afac4ed 248 PANTHER PTHR12532:SF0 1 240 5.8E-106 T 22-04-2016 NHAM_RS18090 8a9e59e3f17eb31e48f07c177afac4ed 248 PANTHER PTHR12532 1 240 5.8E-106 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like NHAM_RS18090 8a9e59e3f17eb31e48f07c177afac4ed 248 Gene3D G3DSA:1.10.10.200 1 80 5.3E-35 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like NHAM_RS18090 8a9e59e3f17eb31e48f07c177afac4ed 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 33.714 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like NHAM_RS18090 8a9e59e3f17eb31e48f07c177afac4ed 248 Gene3D G3DSA:3.30.70.980 134 204 1.2E-20 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 NHAM_RS18090 8a9e59e3f17eb31e48f07c177afac4ed 248 Pfam PF01709 Transcriptional regulator 5 236 1.4E-89 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like NHAM_RS18090 8a9e59e3f17eb31e48f07c177afac4ed 248 Gene3D G3DSA:3.30.1270.10 211 246 4.9E-39 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 NHAM_RS18090 8a9e59e3f17eb31e48f07c177afac4ed 248 Gene3D G3DSA:3.30.1270.10 81 133 4.9E-39 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 NHAM_RS18090 8a9e59e3f17eb31e48f07c177afac4ed 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.8E-93 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like NHAM_RS18090 8a9e59e3f17eb31e48f07c177afac4ed 248 SUPERFAMILY SSF75625 3 245 3.79E-91 T 22-04-2016 IPR029072 YebC-like NHAM_RS16250 43d41a25278814134a8da29740450573 603 Gene3D G3DSA:3.30.565.10 2 199 2.8E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16250 43d41a25278814134a8da29740450573 603 PANTHER PTHR10073 3 603 1.1E-154 T 22-04-2016 NHAM_RS16250 43d41a25278814134a8da29740450573 603 Gene3D G3DSA:3.30.230.10 217 326 6.2E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS16250 43d41a25278814134a8da29740450573 603 SUPERFAMILY SSF118116 413 602 6.67E-58 T 22-04-2016 NHAM_RS16250 43d41a25278814134a8da29740450573 603 Pfam PF08676 MutL C terminal dimerisation domain 413 560 3.3E-47 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 NHAM_RS16250 43d41a25278814134a8da29740450573 603 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 2 309 4.0E-88 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 NHAM_RS16250 43d41a25278814134a8da29740450573 603 SUPERFAMILY SSF55874 2 198 6.81E-49 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16250 43d41a25278814134a8da29740450573 603 SUPERFAMILY SSF54211 200 328 3.26E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS16250 43d41a25278814134a8da29740450573 603 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 600 27.232 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 NHAM_RS16250 43d41a25278814134a8da29740450573 603 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 328 1.1E-33 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 NHAM_RS16250 43d41a25278814134a8da29740450573 603 SMART SM00853 417 560 7.6E-53 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 NHAM_RS16250 43d41a25278814134a8da29740450573 603 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 124 1.1E-9 T 22-04-2016 NHAM_RS16250 43d41a25278814134a8da29740450573 603 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 92 98 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site NHAM_RS16250 43d41a25278814134a8da29740450573 603 SMART SM01340 211 329 1.4E-51 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 PRINTS PR00298 60kDa chaperonin signature 268 291 1.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 PRINTS PR00298 60kDa chaperonin signature 398 419 1.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 PRINTS PR00298 60kDa chaperonin signature 350 375 1.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 PRINTS PR00298 60kDa chaperonin signature 83 110 1.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 PRINTS PR00298 60kDa chaperonin signature 27 53 1.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 SUPERFAMILY SSF54849 137 204 2.75E-22 T 22-04-2016 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 1.1E-255 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 Gene3D G3DSA:3.50.7.10 189 366 2.2E-100 T 22-04-2016 IPR027409 GroEL-like apical domain NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 Gene3D G3DSA:1.10.560.10 367 519 6.0E-44 T 22-04-2016 IPR027413 GroEL-like equatorial domain NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 42.247 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 PANTHER PTHR11353 3 544 4.9E-260 T 22-04-2016 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 SUPERFAMILY SSF52029 184 376 1.38E-84 T 22-04-2016 IPR027409 GroEL-like apical domain NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 SUPERFAMILY SSF48592 406 522 1.6E-77 T 22-04-2016 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 SUPERFAMILY SSF48592 7 134 1.6E-77 T 22-04-2016 NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 Gene3D G3DSA:1.10.560.10 3 188 1.3E-45 T 22-04-2016 IPR027413 GroEL-like equatorial domain NHAM_RS16385 98a8d16b8321fca3d7a643eebfb5deba 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 4.1E-98 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 Pfam PF01751 Toprim domain 434 546 4.9E-18 T 22-04-2016 IPR006171 Toprim domain NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 Gene3D G3DSA:3.30.230.10 237 407 2.1E-68 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 Gene3D G3DSA:3.30.565.10 20 230 8.9E-88 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR00418 DNA topoisomerase II family signature 285 298 3.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR00418 DNA topoisomerase II family signature 435 449 3.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR00418 DNA topoisomerase II family signature 128 142 3.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR00418 DNA topoisomerase II family signature 85 98 3.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR00418 DNA topoisomerase II family signature 50 65 3.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR00418 DNA topoisomerase II family signature 540 552 3.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR00418 DNA topoisomerase II family signature 520 537 3.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR00418 DNA topoisomerase II family signature 746 762 3.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR00418 DNA topoisomerase II family signature 502 518 3.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 Pfam PF00204 DNA gyrase B 238 405 8.2E-54 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 742 803 4.2E-27 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 SUPERFAMILY SSF54211 238 406 7.59E-56 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 SMART SM00387 46 191 1.5E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 SMART SM00433 50 807 4.1E-248 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 17 813 98.362 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 20 809 2.5E-294 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR01159 DNA gyrase subunit B signature 767 779 4.7E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR01159 DNA gyrase subunit B signature 389 409 4.7E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR01159 DNA gyrase subunit B signature 196 211 4.7E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR01159 DNA gyrase subunit B signature 375 389 4.7E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR01159 DNA gyrase subunit B signature 237 259 4.7E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR01159 DNA gyrase subunit B signature 327 343 4.7E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR01159 DNA gyrase subunit B signature 20 30 4.7E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR01159 DNA gyrase subunit B signature 211 224 4.7E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR01159 DNA gyrase subunit B signature 485 494 4.7E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PRINTS PR01159 DNA gyrase subunit B signature 783 799 4.7E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 ProSitePatterns PS00177 DNA topoisomerase II signature. 437 445 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PANTHER PTHR10169 1 568 2.9E-288 T 22-04-2016 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 PANTHER PTHR10169 731 806 2.9E-288 T 22-04-2016 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 SUPERFAMILY SSF55874 20 229 1.7E-70 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 SUPERFAMILY SSF56719 409 575 2.22E-85 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 SUPERFAMILY SSF56719 740 805 2.22E-85 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 Gene3D G3DSA:3.40.50.670 731 796 1.9E-93 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 Gene3D G3DSA:3.40.50.670 419 565 1.9E-93 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS00020 43f07f9e7e1e25c157ba2aa79449428b 813 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 47 188 9.1E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17880 e50939b8ed00782a564ca8d056ea6856 297 Pfam PF03631 Virulence factor BrkB 21 275 2.1E-50 T 22-04-2016 IPR017039 Virulence factor BrkB NHAM_RS17880 e50939b8ed00782a564ca8d056ea6856 297 PANTHER PTHR30213 13 277 5.8E-55 T 22-04-2016 NHAM_RS17880 e50939b8ed00782a564ca8d056ea6856 297 PIRSF PIRSF035875 1 296 1.8E-57 T 22-04-2016 IPR017039 Virulence factor BrkB NHAM_RS17880 e50939b8ed00782a564ca8d056ea6856 297 PANTHER PTHR30213:SF1 13 277 5.8E-55 T 22-04-2016 NHAM_RS16340 76bbe4db4e3fdc7942f98eb6f3983510 391 SUPERFAMILY SSF55681 258 379 1.74E-49 T 22-04-2016 NHAM_RS16340 76bbe4db4e3fdc7942f98eb6f3983510 391 SUPERFAMILY SSF55681 20 175 1.74E-49 T 22-04-2016 NHAM_RS16340 76bbe4db4e3fdc7942f98eb6f3983510 391 Pfam PF13393 Histidyl-tRNA synthetase 10 191 3.7E-27 T 22-04-2016 NHAM_RS16340 76bbe4db4e3fdc7942f98eb6f3983510 391 Pfam PF13393 Histidyl-tRNA synthetase 249 374 4.0E-13 T 22-04-2016 NHAM_RS16340 76bbe4db4e3fdc7942f98eb6f3983510 391 PANTHER PTHR11476 237 377 1.7E-60 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 NHAM_RS16340 76bbe4db4e3fdc7942f98eb6f3983510 391 PANTHER PTHR11476 23 180 1.7E-60 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 NHAM_RS16340 76bbe4db4e3fdc7942f98eb6f3983510 391 Gene3D G3DSA:3.30.930.10 243 244 2.4E-51 T 22-04-2016 NHAM_RS16340 76bbe4db4e3fdc7942f98eb6f3983510 391 Gene3D G3DSA:3.30.930.10 22 171 2.4E-51 T 22-04-2016 NHAM_RS16340 76bbe4db4e3fdc7942f98eb6f3983510 391 Gene3D G3DSA:3.30.930.10 291 377 2.4E-51 T 22-04-2016 NHAM_RS16340 76bbe4db4e3fdc7942f98eb6f3983510 391 PANTHER PTHR11476:SF5 237 377 1.7E-60 T 22-04-2016 NHAM_RS16340 76bbe4db4e3fdc7942f98eb6f3983510 391 PANTHER PTHR11476:SF5 23 180 1.7E-60 T 22-04-2016 NHAM_RS07495 6714ae97fad525d4e25759da5ac07bdc 646 SUPERFAMILY SSF51445 125 646 9.01E-139 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07495 6714ae97fad525d4e25759da5ac07bdc 646 PANTHER PTHR32438 134 646 1.2E-129 T 22-04-2016 NHAM_RS07495 6714ae97fad525d4e25759da5ac07bdc 646 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 99 627 1.3E-103 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 NHAM_RS07495 6714ae97fad525d4e25759da5ac07bdc 646 Pfam PF02446 4-alpha-glucanotransferase 140 625 5.1E-111 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 NHAM_RS07495 6714ae97fad525d4e25759da5ac07bdc 646 Gene3D G3DSA:3.20.20.80 133 630 8.3E-143 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07495 6714ae97fad525d4e25759da5ac07bdc 646 PANTHER PTHR32438:SF5 134 646 1.2E-129 T 22-04-2016 NHAM_RS14405 dadfd13cd2ed4a3d19d221868b043f7a 243 SUPERFAMILY SSF51206 11 150 1.7E-27 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like NHAM_RS14405 dadfd13cd2ed4a3d19d221868b043f7a 243 PANTHER PTHR24567:SF32 10 238 2.0E-46 T 22-04-2016 NHAM_RS14405 dadfd13cd2ed4a3d19d221868b043f7a 243 Gene3D G3DSA:1.10.10.10 153 234 3.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS14405 dadfd13cd2ed4a3d19d221868b043f7a 243 PANTHER PTHR24567 10 238 2.0E-46 T 22-04-2016 NHAM_RS14405 dadfd13cd2ed4a3d19d221868b043f7a 243 Pfam PF13545 Crp-like helix-turn-helix domain 156 228 2.9E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS14405 dadfd13cd2ed4a3d19d221868b043f7a 243 SMART SM00419 174 222 3.6E-7 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS14405 dadfd13cd2ed4a3d19d221868b043f7a 243 SMART SM00100 17 135 9.3E-14 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS14405 dadfd13cd2ed4a3d19d221868b043f7a 243 SUPERFAMILY SSF46785 153 231 7.69E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS14405 dadfd13cd2ed4a3d19d221868b043f7a 243 Gene3D G3DSA:2.60.120.10 12 149 9.5E-28 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS14405 dadfd13cd2ed4a3d19d221868b043f7a 243 Pfam PF00027 Cyclic nucleotide-binding domain 36 123 2.2E-14 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 Gene3D G3DSA:3.20.20.70 27 351 2.3E-149 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 PIRSF PIRSF001415 21 352 1.1E-149 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 Pfam PF00490 Delta-aminolevulinic acid dehydratase 30 347 7.9E-142 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 293 308 1.1E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 215 234 1.1E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 268 284 1.1E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 177 196 1.1E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 147 161 1.1E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 323 342 1.1E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 SMART SM01004 27 349 1.9E-232 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 268 280 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 PANTHER PTHR11458 1 351 1.2E-184 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS11415 aea07c9037c1dcae3fc9e7a007617efe 353 SUPERFAMILY SSF51569 25 351 4.83E-142 T 22-04-2016 NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 SUPERFAMILY SSF47005 142 187 5.89E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 PANTHER PTHR23151:SF9 5 453 5.2E-194 T 22-04-2016 NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 Gene3D G3DSA:3.30.559.10 221 453 1.8E-86 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 454 2.5E-170 T 22-04-2016 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 SUPERFAMILY SSF52777 221 453 1.25E-78 T 22-04-2016 NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 PANTHER PTHR23151 5 453 5.2E-194 T 22-04-2016 NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 Pfam PF00364 Biotin-requiring enzyme 5 77 1.0E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 SUPERFAMILY SSF51230 1 93 5.89E-29 T 22-04-2016 IPR011053 Single hybrid motif NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 Gene3D G3DSA:4.10.320.10 140 188 6.1E-17 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 Pfam PF02817 e3 binding domain 149 184 9.8E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 Gene3D G3DSA:2.40.50.100 2 95 2.3E-34 T 22-04-2016 NHAM_RS08950 a345ae6464eaf0440dd415b78d749085 454 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 222 453 8.0E-80 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 NHAM_RS08125 78b6ed06873b453746895f05dbcc6ce0 195 SUPERFAMILY SSF46955 10 77 3.39E-15 T 22-04-2016 IPR009061 Putative DNA-binding domain NHAM_RS08125 78b6ed06873b453746895f05dbcc6ce0 195 PANTHER PTHR30204 1 86 2.4E-21 T 22-04-2016 NHAM_RS08125 78b6ed06873b453746895f05dbcc6ce0 195 SMART SM00422 10 79 2.1E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NHAM_RS08125 78b6ed06873b453746895f05dbcc6ce0 195 PANTHER PTHR30204:SF15 1 86 2.4E-21 T 22-04-2016 NHAM_RS08125 78b6ed06873b453746895f05dbcc6ce0 195 Gene3D G3DSA:1.10.1660.10 10 91 1.6E-14 T 22-04-2016 NHAM_RS08125 78b6ed06873b453746895f05dbcc6ce0 195 Pfam PF13411 MerR HTH family regulatory protein 10 78 9.5E-25 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NHAM_RS01230 fb2e2cb3de430c882c16b93419afbc6f 312 PANTHER PTHR12715 28 311 5.7E-74 T 22-04-2016 NHAM_RS01230 fb2e2cb3de430c882c16b93419afbc6f 312 SUPERFAMILY SSF103481 202 303 4.71E-14 T 22-04-2016 NHAM_RS01230 fb2e2cb3de430c882c16b93419afbc6f 312 SUPERFAMILY SSF103481 56 157 2.62E-15 T 22-04-2016 NHAM_RS01230 fb2e2cb3de430c882c16b93419afbc6f 312 Pfam PF00892 EamA-like transporter family 167 301 2.0E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NHAM_RS01230 fb2e2cb3de430c882c16b93419afbc6f 312 Pfam PF00892 EamA-like transporter family 29 154 1.4E-25 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NHAM_RS01230 fb2e2cb3de430c882c16b93419afbc6f 312 PANTHER PTHR12715:SF4 28 311 5.7E-74 T 22-04-2016 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 SUPERFAMILY SSF46977 416 482 4.45E-15 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 Gene3D G3DSA:3.90.700.10 232 333 9.6E-32 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 SUPERFAMILY SSF51905 341 404 4.83E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 SUPERFAMILY SSF51905 11 252 4.83E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 340 362 1.7E-8 T 22-04-2016 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.7E-8 T 22-04-2016 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 PANTHER PTHR11632 11 491 8.0E-157 T 22-04-2016 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 Gene3D G3DSA:1.20.58.100 419 483 5.5E-9 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 SUPERFAMILY SSF56425 226 337 9.87E-34 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 10 480 1.1E-141 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 Pfam PF02910 Fumarate reductase flavoprotein C-term 455 482 1.3E-6 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 Gene3D G3DSA:3.50.50.60 6 231 6.1E-85 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 Gene3D G3DSA:3.50.50.60 334 398 6.1E-85 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 PANTHER PTHR11632:SF27 11 491 8.0E-157 T 22-04-2016 NHAM_RS14445 dcdc70f243ff8a10eabb3c594508d6ad 509 Pfam PF00890 FAD binding domain 11 377 3.9E-84 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain NHAM_RS00375 80f50a5131ddc43e2c150e11e0349ac5 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.0E-13 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NHAM_RS00375 80f50a5131ddc43e2c150e11e0349ac5 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.0E-13 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NHAM_RS00375 80f50a5131ddc43e2c150e11e0349ac5 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.0E-13 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NHAM_RS00375 80f50a5131ddc43e2c150e11e0349ac5 66 SUPERFAMILY SSF143034 2 62 4.71E-20 T 22-04-2016 NHAM_RS00375 80f50a5131ddc43e2c150e11e0349ac5 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.8E-23 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NHAM_RS00375 80f50a5131ddc43e2c150e11e0349ac5 66 Pfam PF01632 Ribosomal protein L35 2 60 1.7E-21 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS00375 80f50a5131ddc43e2c150e11e0349ac5 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.282 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NHAM_RS00375 80f50a5131ddc43e2c150e11e0349ac5 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS00375 80f50a5131ddc43e2c150e11e0349ac5 66 PANTHER PTHR33343 1 66 5.3E-23 T 22-04-2016 NHAM_RS00495 2e5990f477714327f6979e5227716156 194 Pfam PF04390 Lipopolysaccharide-assembly 28 186 3.1E-9 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 Gene3D G3DSA:3.40.50.300 5 110 2.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 Gene3D G3DSA:3.40.50.300 235 321 2.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 PANTHER PTHR11262 208 433 4.9E-203 T 22-04-2016 NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 PANTHER PTHR11262 1 105 4.9E-203 T 22-04-2016 NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 PANTHER PTHR11262:SF3 208 433 4.9E-203 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 PANTHER PTHR11262:SF3 1 105 4.9E-203 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 433 4.7E-185 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 Pfam PF07724 AAA domain (Cdc48 subfamily) 197 319 5.3E-39 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 Gene3D G3DSA:1.10.8.10 203 233 1.9E-24 T 22-04-2016 NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 Gene3D G3DSA:1.10.8.10 111 166 1.9E-24 T 22-04-2016 NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 Gene3D G3DSA:1.10.8.60 325 433 1.4E-35 T 22-04-2016 NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 SMART SM00382 49 322 4.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 SMART SM01086 325 419 5.2E-26 T 22-04-2016 IPR019489 Clp ATPase, C-terminal NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 325 395 7.3E-8 T 22-04-2016 IPR019489 Clp ATPase, C-terminal NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 433 41.516 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 SUPERFAMILY SSF52540 6 431 1.68E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00600 02f5a5ecb261e0d3684bbfa2e4e8eb2f 433 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 101 1.4E-6 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS13380 6a8e8f1f3ccdf131bc51ead39fa6536e 373 PANTHER PTHR30483 1 360 1.7E-120 T 22-04-2016 NHAM_RS13380 6a8e8f1f3ccdf131bc51ead39fa6536e 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 4.0E-26 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NHAM_RS13380 6a8e8f1f3ccdf131bc51ead39fa6536e 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 328 343 4.0E-26 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NHAM_RS13380 6a8e8f1f3ccdf131bc51ead39fa6536e 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 4.0E-26 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NHAM_RS13380 6a8e8f1f3ccdf131bc51ead39fa6536e 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 4.0E-26 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NHAM_RS13380 6a8e8f1f3ccdf131bc51ead39fa6536e 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 4.0E-26 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NHAM_RS13380 6a8e8f1f3ccdf131bc51ead39fa6536e 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 4.0E-26 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NHAM_RS13380 6a8e8f1f3ccdf131bc51ead39fa6536e 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 4.0E-26 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NHAM_RS13380 6a8e8f1f3ccdf131bc51ead39fa6536e 373 PANTHER PTHR30483:SF20 1 360 1.7E-120 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NHAM_RS13380 6a8e8f1f3ccdf131bc51ead39fa6536e 373 Gene3D G3DSA:3.40.50.2300 25 224 8.4E-60 T 22-04-2016 NHAM_RS13380 6a8e8f1f3ccdf131bc51ead39fa6536e 373 SUPERFAMILY SSF53822 25 362 6.48E-90 T 22-04-2016 IPR028082 Periplasmic binding protein-like I NHAM_RS13380 6a8e8f1f3ccdf131bc51ead39fa6536e 373 Pfam PF13458 Periplasmic binding protein 26 361 1.8E-55 T 22-04-2016 IPR028081 Leucine-binding protein domain NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 Hamap MF_00900 GTPase HflX [hflX]. 54 425 46.01 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 Pfam PF16360 GTP-binding GTPase Middle Region 141 220 3.2E-29 T 22-04-2016 IPR032305 GTP-binding protein, middle domain NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 48 395 1.2E-134 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 SUPERFAMILY SSF52540 227 400 1.39E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 Pfam PF01926 50S ribosome-binding GTPase 228 348 4.0E-19 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 Pfam PF13167 GTP-binding GTPase N-terminal 52 138 2.1E-27 T 22-04-2016 IPR025121 GTPase HflX, N-terminal NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 PANTHER PTHR10229:SF0 15 440 2.3E-172 T 22-04-2016 NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 248 9.7E-11 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 249 267 9.7E-11 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 295 313 9.7E-11 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 PIRSF PIRSF006809 27 457 2.1E-143 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 Gene3D G3DSA:3.40.50.300 226 396 8.3E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09425 b055b36832c4121701c0af1ea42dfab8 459 PANTHER PTHR10229 15 440 2.3E-172 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 NHAM_RS18660 c17d17f29db45248cafce3b8912e7340 228 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 228 45.618 T 22-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 NHAM_RS18660 c17d17f29db45248cafce3b8912e7340 228 SUPERFAMILY SSF51197 3 176 1.65E-5 T 22-04-2016 NHAM_RS18660 c17d17f29db45248cafce3b8912e7340 228 SMART SM00702 2 179 3.8E-16 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 NHAM_RS18660 c17d17f29db45248cafce3b8912e7340 228 PANTHER PTHR41536 2 228 7.4E-111 T 22-04-2016 NHAM_RS18660 c17d17f29db45248cafce3b8912e7340 228 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 178 1.0E-10 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 NHAM_RS18660 c17d17f29db45248cafce3b8912e7340 228 PANTHER PTHR41536:SF1 2 228 7.4E-111 T 22-04-2016 NHAM_RS08190 9e16dab6997a60b2406e9bcf91e325bf 97 PANTHER PTHR30007 7 76 2.7E-18 T 22-04-2016 NHAM_RS08190 9e16dab6997a60b2406e9bcf91e325bf 97 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 7 76 3.4E-21 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS08190 9e16dab6997a60b2406e9bcf91e325bf 97 PANTHER PTHR30007:SF0 7 76 2.7E-18 T 22-04-2016 NHAM_RS07630 5d0e61b3fec87bfc76f2f69210b8d231 652 Gene3D G3DSA:1.20.1560.10 32 360 2.3E-61 T 22-04-2016 NHAM_RS07630 5d0e61b3fec87bfc76f2f69210b8d231 652 Pfam PF00005 ABC transporter 394 543 3.9E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS07630 5d0e61b3fec87bfc76f2f69210b8d231 652 SMART SM00382 403 589 1.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS07630 5d0e61b3fec87bfc76f2f69210b8d231 652 PANTHER PTHR24221:SF250 27 622 0.0 T 22-04-2016 NHAM_RS07630 5d0e61b3fec87bfc76f2f69210b8d231 652 ProSitePatterns PS00211 ABC transporters family signature. 515 529 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS07630 5d0e61b3fec87bfc76f2f69210b8d231 652 SUPERFAMILY SSF90123 32 361 1.2E-59 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS07630 5d0e61b3fec87bfc76f2f69210b8d231 652 PANTHER PTHR24221 27 622 0.0 T 22-04-2016 NHAM_RS07630 5d0e61b3fec87bfc76f2f69210b8d231 652 Gene3D G3DSA:3.40.50.300 378 608 2.2E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07630 5d0e61b3fec87bfc76f2f69210b8d231 652 Pfam PF00664 ABC transporter transmembrane region 51 332 2.5E-33 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS07630 5d0e61b3fec87bfc76f2f69210b8d231 652 SUPERFAMILY SSF52540 369 613 1.21E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02220 eb5905fe4dd505d1ce067d83f01e89ce 268 SMART SM00382 46 222 2.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS02220 eb5905fe4dd505d1ce067d83f01e89ce 268 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS02220 eb5905fe4dd505d1ce067d83f01e89ce 268 PANTHER PTHR24220:SF589 22 255 1.5E-90 T 22-04-2016 NHAM_RS02220 eb5905fe4dd505d1ce067d83f01e89ce 268 PANTHER PTHR24220 22 255 1.5E-90 T 22-04-2016 NHAM_RS02220 eb5905fe4dd505d1ce067d83f01e89ce 268 Pfam PF00005 ABC transporter 39 172 3.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS02220 eb5905fe4dd505d1ce067d83f01e89ce 268 Gene3D G3DSA:3.40.50.300 20 232 2.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02220 eb5905fe4dd505d1ce067d83f01e89ce 268 SUPERFAMILY SSF52540 21 239 7.27E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS21000 278739e7e90be296b56406c7e27b6663 117 Gene3D G3DSA:3.30.450.20 7 115 3.0E-12 T 22-04-2016 NHAM_RS21000 278739e7e90be296b56406c7e27b6663 117 Pfam PF12860 PAS fold 10 116 7.8E-13 T 22-04-2016 NHAM_RS21000 278739e7e90be296b56406c7e27b6663 117 SUPERFAMILY SSF55785 7 115 5.41E-10 T 22-04-2016 IPR000014 PAS domain NHAM_RS18795 f7bc3566087082e1b14c7326dc0b4a77 391 PIRSF PIRSF000355 47 391 9.5E-125 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 NHAM_RS18795 f7bc3566087082e1b14c7326dc0b4a77 391 PANTHER PTHR23409:SF18 28 386 1.4E-149 T 22-04-2016 NHAM_RS18795 f7bc3566087082e1b14c7326dc0b4a77 391 Gene3D G3DSA:1.10.620.20 60 364 1.5E-103 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 NHAM_RS18795 f7bc3566087082e1b14c7326dc0b4a77 391 PANTHER PTHR23409 28 386 1.4E-149 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 NHAM_RS18795 f7bc3566087082e1b14c7326dc0b4a77 391 SUPERFAMILY SSF47240 41 364 5.58E-92 T 22-04-2016 IPR009078 Ferritin-like superfamily NHAM_RS18795 f7bc3566087082e1b14c7326dc0b4a77 391 Pfam PF00268 Ribonucleotide reductase, small chain 71 358 1.1E-81 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 NHAM_RS16520 3b8bb6339d5892b1eaa5b4c4838c05d1 307 Pfam PF04228 Putative neutral zinc metallopeptidase 1 302 2.5E-102 T 22-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative NHAM_RS16520 3b8bb6339d5892b1eaa5b4c4838c05d1 307 PANTHER PTHR30168 2 307 2.5E-139 T 22-04-2016 NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 SMART SM00091 338 405 0.013 T 22-04-2016 IPR000014 PAS domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 SMART SM00091 91 158 0.46 T 22-04-2016 IPR000014 PAS domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 SMART SM00091 211 278 2.4 T 22-04-2016 IPR000014 PAS domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 SUPERFAMILY SSF55785 322 444 5.41E-18 T 22-04-2016 IPR000014 PAS domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 Pfam PF00563 EAL domain 638 873 1.2E-69 T 22-04-2016 IPR001633 EAL domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 Pfam PF12860 PAS fold 97 201 1.3E-13 T 22-04-2016 NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 Gene3D G3DSA:3.30.450.20 199 323 9.3E-16 T 22-04-2016 NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 SUPERFAMILY SSF55785 197 324 8.72E-14 T 22-04-2016 IPR000014 PAS domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 460 621 3.4E-30 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 PANTHER PTHR10799 365 716 3.4E-87 T 22-04-2016 NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 PANTHER PTHR10799 771 790 3.4E-87 T 22-04-2016 NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 Pfam PF00990 Diguanylate cyclase, GGDEF domain 463 616 1.2E-34 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 SUPERFAMILY SSF55073 468 624 4.32E-38 T 22-04-2016 IPR029787 Nucleotide cyclase NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 Gene3D G3DSA:3.30.450.20 324 444 9.2E-18 T 22-04-2016 NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 PANTHER PTHR10799:SF641 365 716 3.4E-87 T 22-04-2016 NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 PANTHER PTHR10799:SF641 771 790 3.4E-87 T 22-04-2016 NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 SMART SM00052 632 878 4.9E-108 T 22-04-2016 IPR001633 EAL domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 SUPERFAMILY SSF55785 81 132 4.36E-5 T 22-04-2016 IPR000014 PAS domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 SMART SM00086 411 452 4.8 T 22-04-2016 IPR001610 PAC motif NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 SMART SM00086 283 326 15.0 T 22-04-2016 IPR001610 PAC motif NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 Gene3D G3DSA:3.30.70.270 464 630 1.3E-46 T 22-04-2016 NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 Gene3D G3DSA:3.20.20.450 636 883 1.2E-91 T 22-04-2016 IPR001633 EAL domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 Gene3D G3DSA:3.30.450.20 89 198 4.3E-5 T 22-04-2016 NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 SUPERFAMILY SSF141868 638 883 1.57E-87 T 22-04-2016 IPR001633 EAL domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 337 458 1.3E-6 T 22-04-2016 IPR000014 PAS domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 210 333 9.2E-8 T 22-04-2016 IPR000014 PAS domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 SMART SM00267 452 622 9.4E-49 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 Pfam PF08448 PAS fold 344 454 6.3E-10 T 22-04-2016 IPR013656 PAS fold-4 NHAM_RS06330 d70680ddf03efd23bebe40e9aa35e339 898 Pfam PF08448 PAS fold 218 327 1.3E-11 T 22-04-2016 IPR013656 PAS fold-4 NHAM_RS07050 d3490074a174e00284e0ffb653a013b9 252 Pfam PF02107 Flagellar L-ring protein 69 251 3.2E-56 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NHAM_RS07050 d3490074a174e00284e0ffb653a013b9 252 PRINTS PR01008 Flagellar L-ring protein signature 192 208 5.5E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NHAM_RS07050 d3490074a174e00284e0ffb653a013b9 252 PRINTS PR01008 Flagellar L-ring protein signature 89 101 5.5E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NHAM_RS07050 d3490074a174e00284e0ffb653a013b9 252 PRINTS PR01008 Flagellar L-ring protein signature 166 181 5.5E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NHAM_RS07050 d3490074a174e00284e0ffb653a013b9 252 PRINTS PR01008 Flagellar L-ring protein signature 229 243 5.5E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NHAM_RS07050 d3490074a174e00284e0ffb653a013b9 252 PRINTS PR01008 Flagellar L-ring protein signature 213 227 5.5E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NHAM_RS07050 d3490074a174e00284e0ffb653a013b9 252 Hamap MF_00415 Flagellar L-ring protein [flgH]. 7 250 25.258 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NHAM_RS07050 d3490074a174e00284e0ffb653a013b9 252 PANTHER PTHR34933:SF1 41 252 5.3E-70 T 22-04-2016 NHAM_RS07050 d3490074a174e00284e0ffb653a013b9 252 PANTHER PTHR34933 41 252 5.3E-70 T 22-04-2016 NHAM_RS10130 4d48716c65d03fb6250085c0f23cc038 427 PANTHER PTHR33840 2 414 4.2E-119 T 22-04-2016 NHAM_RS10130 4d48716c65d03fb6250085c0f23cc038 427 Gene3D G3DSA:3.40.50.1820 75 123 4.7E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS10130 4d48716c65d03fb6250085c0f23cc038 427 SUPERFAMILY SSF53474 4 133 4.38E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS10130 4d48716c65d03fb6250085c0f23cc038 427 PANTHER PTHR33840:SF4 2 414 4.2E-119 T 22-04-2016 NHAM_RS10130 4d48716c65d03fb6250085c0f23cc038 427 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 2 300 3.4E-81 T 22-04-2016 IPR018712 Domain of unknown function DUF2235 NHAM_RS00505 ace026c6212ec9dd0aea0566437c0ae8 95 SUPERFAMILY SSF82771 3 89 1.44E-18 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily NHAM_RS00505 ace026c6212ec9dd0aea0566437c0ae8 95 Pfam PF01541 GIY-YIG catalytic domain 4 71 1.6E-13 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily NHAM_RS00505 ace026c6212ec9dd0aea0566437c0ae8 95 PANTHER PTHR34477 1 92 7.0E-32 T 22-04-2016 NHAM_RS00505 ace026c6212ec9dd0aea0566437c0ae8 95 Gene3D G3DSA:3.40.1440.10 3 42 3.0E-4 T 22-04-2016 IPR027299 GIY-YIG domain NHAM_RS00505 ace026c6212ec9dd0aea0566437c0ae8 95 PANTHER PTHR34477:SF2 1 92 7.0E-32 T 22-04-2016 NHAM_RS08935 2b22881e0d6b84a2bab8217bb91db23c 105 Pfam PF04977 Septum formation initiator 24 104 9.4E-20 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 NHAM_RS03660 9c8ad5b927f5fa0d19072b26ed5836b8 570 PANTHER PTHR11814:SF55 18 567 6.1E-117 T 22-04-2016 NHAM_RS03660 9c8ad5b927f5fa0d19072b26ed5836b8 570 PANTHER PTHR11814 18 567 6.1E-117 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 NHAM_RS03660 9c8ad5b927f5fa0d19072b26ed5836b8 570 SUPERFAMILY SSF52091 446 555 1.94E-11 T 22-04-2016 IPR002645 STAS domain NHAM_RS03660 9c8ad5b927f5fa0d19072b26ed5836b8 570 Pfam PF01740 STAS domain 444 551 8.1E-14 T 22-04-2016 IPR002645 STAS domain NHAM_RS03660 9c8ad5b927f5fa0d19072b26ed5836b8 570 Gene3D G3DSA:3.30.750.24 445 555 1.0E-12 T 22-04-2016 IPR002645 STAS domain NHAM_RS03660 9c8ad5b927f5fa0d19072b26ed5836b8 570 Pfam PF00916 Sulfate permease family 23 388 1.5E-62 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 NHAM_RS20580 0f4187295b10c807e9903063d66d54b1 444 Pfam PF01979 Amidohydrolase family 54 421 1.1E-24 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 NHAM_RS20580 0f4187295b10c807e9903063d66d54b1 444 Gene3D G3DSA:2.30.40.10 6 70 1.6E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NHAM_RS20580 0f4187295b10c807e9903063d66d54b1 444 Gene3D G3DSA:3.20.20.140 71 408 3.4E-95 T 22-04-2016 NHAM_RS20580 0f4187295b10c807e9903063d66d54b1 444 SUPERFAMILY SSF51338 367 432 7.93E-33 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NHAM_RS20580 0f4187295b10c807e9903063d66d54b1 444 SUPERFAMILY SSF51338 5 56 7.93E-33 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NHAM_RS20580 0f4187295b10c807e9903063d66d54b1 444 PANTHER PTHR11647 1 437 4.7E-140 T 22-04-2016 NHAM_RS20580 0f4187295b10c807e9903063d66d54b1 444 ProSitePatterns PS00483 Dihydroorotase signature 2. 303 314 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS20580 0f4187295b10c807e9903063d66d54b1 444 SUPERFAMILY SSF51556 57 368 4.68E-91 T 22-04-2016 IPR032466 Metal-dependent hydrolase NHAM_RS20580 0f4187295b10c807e9903063d66d54b1 444 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 23 424 2.6E-95 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS20580 0f4187295b10c807e9903063d66d54b1 444 PANTHER PTHR11647:SF1 1 437 4.7E-140 T 22-04-2016 NHAM_RS11255 8a4768a7d1bab81a2b9f102aede7df4c 162 Pfam PF12838 4Fe-4S dicluster domain 61 116 1.1E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NHAM_RS11255 8a4768a7d1bab81a2b9f102aede7df4c 162 SUPERFAMILY SSF54862 35 146 2.43E-28 T 22-04-2016 NHAM_RS11255 8a4768a7d1bab81a2b9f102aede7df4c 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 9 159 27.987 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 NHAM_RS11255 8a4768a7d1bab81a2b9f102aede7df4c 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NHAM_RS11255 8a4768a7d1bab81a2b9f102aede7df4c 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NHAM_RS11255 8a4768a7d1bab81a2b9f102aede7df4c 162 Gene3D G3DSA:1.10.1060.10 14 139 5.7E-25 T 22-04-2016 NHAM_RS11255 8a4768a7d1bab81a2b9f102aede7df4c 162 PANTHER PTHR10849 3 162 5.3E-107 T 22-04-2016 NHAM_RS11255 8a4768a7d1bab81a2b9f102aede7df4c 162 PANTHER PTHR10849:SF20 3 162 5.3E-107 T 22-04-2016 NHAM_RS11255 8a4768a7d1bab81a2b9f102aede7df4c 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 1.7E-48 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 NHAM_RS13100 8f5e7ca9dfec2d2cdd676f61160e389f 197 SUPERFAMILY SSF82199 16 134 3.4E-34 T 22-04-2016 NHAM_RS13100 8f5e7ca9dfec2d2cdd676f61160e389f 197 PANTHER PTHR22884:SF336 15 130 1.8E-22 T 22-04-2016 NHAM_RS13100 8f5e7ca9dfec2d2cdd676f61160e389f 197 SMART SM00317 8 121 8.1E-31 T 22-04-2016 IPR001214 SET domain GO:0005515 NHAM_RS13100 8f5e7ca9dfec2d2cdd676f61160e389f 197 PANTHER PTHR22884 15 130 1.8E-22 T 22-04-2016 NHAM_RS13100 8f5e7ca9dfec2d2cdd676f61160e389f 197 Pfam PF00856 SET domain 18 115 8.3E-19 T 22-04-2016 IPR001214 SET domain GO:0005515 NHAM_RS13100 8f5e7ca9dfec2d2cdd676f61160e389f 197 Gene3D G3DSA:2.170.270.10 16 134 1.7E-29 T 22-04-2016 NHAM_RS05655 0471f2969fbbbd62edff21ccf2ce2d8c 583 Gene3D G3DSA:3.30.750.24 462 566 1.5E-17 T 22-04-2016 IPR002645 STAS domain NHAM_RS05655 0471f2969fbbbd62edff21ccf2ce2d8c 583 PANTHER PTHR11814:SF112 25 568 3.1E-189 T 22-04-2016 NHAM_RS05655 0471f2969fbbbd62edff21ccf2ce2d8c 583 SUPERFAMILY SSF52091 461 563 2.16E-17 T 22-04-2016 IPR002645 STAS domain NHAM_RS05655 0471f2969fbbbd62edff21ccf2ce2d8c 583 PANTHER PTHR11814 25 568 3.1E-189 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 NHAM_RS05655 0471f2969fbbbd62edff21ccf2ce2d8c 583 Pfam PF00916 Sulfate permease family 37 400 2.0E-81 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 NHAM_RS05655 0471f2969fbbbd62edff21ccf2ce2d8c 583 Pfam PF01740 STAS domain 460 548 4.4E-12 T 22-04-2016 IPR002645 STAS domain NHAM_RS08495 d1d6483cd3d7e81ad3ad27e29a92e547 259 PANTHER PTHR20275 19 257 2.4E-91 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NHAM_RS08495 d1d6483cd3d7e81ad3ad27e29a92e547 259 Pfam PF01513 ATP-NAD kinase 32 185 4.8E-16 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NHAM_RS08495 d1d6483cd3d7e81ad3ad27e29a92e547 259 PANTHER PTHR20275:SF7 19 257 2.4E-91 T 22-04-2016 NHAM_RS08495 d1d6483cd3d7e81ad3ad27e29a92e547 259 Gene3D G3DSA:3.40.50.10330 17 114 1.2E-17 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NHAM_RS08495 d1d6483cd3d7e81ad3ad27e29a92e547 259 Hamap MF_00361 NAD kinase [nadK]. 8 259 19.898 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NHAM_RS08495 d1d6483cd3d7e81ad3ad27e29a92e547 259 SUPERFAMILY SSF111331 27 244 4.19E-55 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain NHAM_RS08495 d1d6483cd3d7e81ad3ad27e29a92e547 259 Gene3D G3DSA:2.60.200.30 115 230 6.5E-28 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NHAM_RS08900 79c4336f76dd364932b66c9d7eaff0a0 238 Pfam PF13505 Outer membrane protein beta-barrel domain 10 207 1.7E-8 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel NHAM_RS08900 79c4336f76dd364932b66c9d7eaff0a0 238 Gene3D G3DSA:2.40.160.20 11 194 2.5E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS08900 79c4336f76dd364932b66c9d7eaff0a0 238 SUPERFAMILY SSF56925 35 204 4.19E-8 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 PANTHER PTHR19211:SF45 1 568 5.1E-238 T 22-04-2016 NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 SUPERFAMILY SSF52540 2 241 9.7E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 Gene3D G3DSA:3.40.50.300 309 516 1.3E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 Gene3D G3DSA:3.40.50.300 1 262 1.2E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 SMART SM00382 26 220 7.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 SMART SM00382 336 503 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 SUPERFAMILY SSF52540 298 509 4.84E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 Pfam PF12848 ABC transporter 214 295 8.9E-24 T 22-04-2016 IPR032781 ABC-transporter extension domain NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 PANTHER PTHR19211 1 568 5.1E-238 T 22-04-2016 NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 Pfam PF00005 ABC transporter 327 458 7.8E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS11905 22108f3b4b4a79133de537d0a2b5b326 625 Pfam PF00005 ABC transporter 18 175 6.2E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 Gene3D G3DSA:2.70.98.40 1559 1844 2.3E-94 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 Gene3D G3DSA:2.70.98.40 2045 2367 2.8E-98 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 SUPERFAMILY SSF48208 2321 2838 7.48E-96 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 SUPERFAMILY SSF74650 2045 2310 6.91E-94 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 Pfam PF10091 Putative glucoamylase 1301 1508 1.0E-12 T 22-04-2016 IPR019282 Domain of unknown function DUF2329 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 SUPERFAMILY SSF74650 1558 1811 2.82E-81 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 PANTHER PTHR37469:SF2 1779 2845 0.0 T 22-04-2016 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 PANTHER PTHR37469:SF2 62 1763 0.0 T 22-04-2016 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 PANTHER PTHR37469 1779 2845 0.0 T 22-04-2016 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 PANTHER PTHR37469 62 1763 0.0 T 22-04-2016 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 SMART SM01068 2045 2110 5.4E-33 T 22-04-2016 IPR009342 Putative carbohydrate binding domain NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 SMART SM01068 1539 1598 1.7E-23 T 22-04-2016 IPR009342 Putative carbohydrate binding domain NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 Pfam PF06165 Glycosyltransferase family 36 1561 1808 3.7E-75 T 22-04-2016 IPR010383 Glycosyl hydrolase 94 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 Pfam PF06165 Glycosyltransferase family 36 2068 2308 1.0E-84 T 22-04-2016 IPR010383 Glycosyl hydrolase 94 NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2338 2764 4.2E-118 T 22-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain NHAM_RS12935 7218d2a6a3833d079cd559a82d9e45b7 2845 Gene3D G3DSA:2.60.420.10 2757 2806 3.9E-5 T 22-04-2016 NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 Gene3D G3DSA:3.40.50.300 654 822 1.3E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 Pfam PF00271 Helicase conserved C-terminal domain 662 800 2.2E-13 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 Pfam PF00176 SNF2 family N-terminal domain 240 290 4.7E-6 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 SMART SM00487 224 414 4.0E-8 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 SMART SM00490 698 800 3.6E-10 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 Gene3D G3DSA:3.40.50.300 225 398 7.0E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 SUPERFAMILY SSF52540 276 418 1.03E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 SUPERFAMILY SSF52540 660 823 1.03E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 PANTHER PTHR10799:SF712 728 830 6.6E-127 T 22-04-2016 NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 PANTHER PTHR10799:SF712 615 700 6.6E-127 T 22-04-2016 NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 PANTHER PTHR10799:SF712 425 447 6.6E-127 T 22-04-2016 NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 PANTHER PTHR10799:SF712 508 543 6.6E-127 T 22-04-2016 NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 PANTHER PTHR10799:SF712 198 408 6.6E-127 T 22-04-2016 NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 PANTHER PTHR10799 728 830 6.6E-127 T 22-04-2016 NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 PANTHER PTHR10799 615 700 6.6E-127 T 22-04-2016 NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 PANTHER PTHR10799 425 447 6.6E-127 T 22-04-2016 NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 PANTHER PTHR10799 508 543 6.6E-127 T 22-04-2016 NHAM_RS03020 44a83cdcb58948647afdb78fef3ab5ce 1071 PANTHER PTHR10799 198 408 6.6E-127 T 22-04-2016 NHAM_RS03220 b7be109bdaaede84a5acfd9a815ce34d 431 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 16 410 29.56 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 NHAM_RS03220 b7be109bdaaede84a5acfd9a815ce34d 431 SUPERFAMILY SSF56014 307 403 3.92E-7 T 22-04-2016 NHAM_RS03220 b7be109bdaaede84a5acfd9a815ce34d 431 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 18 406 8.7E-126 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 NHAM_RS03220 b7be109bdaaede84a5acfd9a815ce34d 431 PIRSF PIRSF004640 11 418 3.5E-129 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 NHAM_RS03220 b7be109bdaaede84a5acfd9a815ce34d 431 Pfam PF04551 GcpE protein 21 407 7.4E-111 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 NHAM_RS03220 b7be109bdaaede84a5acfd9a815ce34d 431 PANTHER PTHR30454 13 415 1.7E-151 T 22-04-2016 NHAM_RS02715 e54076d4508666c709313bc4485651ce 98 Gene3D G3DSA:3.30.460.10 2 90 8.4E-35 T 22-04-2016 NHAM_RS02715 e54076d4508666c709313bc4485651ce 98 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 89 19.556 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS NHAM_RS02715 e54076d4508666c709313bc4485651ce 98 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 2 88 3.4E-34 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS NHAM_RS02715 e54076d4508666c709313bc4485651ce 98 PANTHER PTHR21043 1 88 1.6E-38 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS NHAM_RS02715 e54076d4508666c709313bc4485651ce 98 Pfam PF02410 Ribosomal silencing factor during starvation 2 88 1.6E-26 T 22-04-2016 NHAM_RS02715 e54076d4508666c709313bc4485651ce 98 SUPERFAMILY SSF81301 1 92 1.05E-35 T 22-04-2016 NHAM_RS08535 e57693627bf6f55a9343a61dafd77bfb 121 Gene3D G3DSA:3.40.30.10 2 113 1.1E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS08535 e57693627bf6f55a9343a61dafd77bfb 121 PANTHER PTHR30041:SF3 2 112 1.7E-44 T 22-04-2016 NHAM_RS08535 e57693627bf6f55a9343a61dafd77bfb 121 SUPERFAMILY SSF52833 2 114 1.12E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS08535 e57693627bf6f55a9343a61dafd77bfb 121 Pfam PF03960 ArsC family 6 112 3.3E-19 T 22-04-2016 IPR006660 Arsenate reductase-like NHAM_RS08535 e57693627bf6f55a9343a61dafd77bfb 121 PANTHER PTHR30041 2 112 1.7E-44 T 22-04-2016 NHAM_RS08535 e57693627bf6f55a9343a61dafd77bfb 121 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 4.1E-30 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR NHAM_RS09380 bce40a23239b7d009190ce1530f66bf0 208 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 16 159 5.6E-50 T 22-04-2016 IPR008136 CinA, C-terminal NHAM_RS09380 bce40a23239b7d009190ce1530f66bf0 208 Pfam PF02464 Competence-damaged protein 9 160 2.6E-57 T 22-04-2016 IPR008136 CinA, C-terminal NHAM_RS09380 bce40a23239b7d009190ce1530f66bf0 208 SUPERFAMILY SSF142433 4 161 1.2E-55 T 22-04-2016 IPR008136 CinA, C-terminal NHAM_RS09380 bce40a23239b7d009190ce1530f66bf0 208 Gene3D G3DSA:3.90.950.20 4 162 1.2E-57 T 22-04-2016 IPR008136 CinA, C-terminal NHAM_RS09380 bce40a23239b7d009190ce1530f66bf0 208 PANTHER PTHR13939 1 170 5.9E-72 T 22-04-2016 NHAM_RS07575 20e84d7428efb6a97e35f671c6bfbf64 462 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 448 4.8E-218 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 NHAM_RS07575 20e84d7428efb6a97e35f671c6bfbf64 462 SUPERFAMILY SSF51569 2 446 1.1E-204 T 22-04-2016 NHAM_RS07575 20e84d7428efb6a97e35f671c6bfbf64 462 PANTHER PTHR21337 3 451 0.0 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 NHAM_RS07575 20e84d7428efb6a97e35f671c6bfbf64 462 Pfam PF01474 Class-II DAHP synthetase family 5 442 1.5E-207 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 NHAM_RS01210 01a4afca153b32a868c96ebe2d4cf396 452 Gene3D G3DSA:2.40.160.20 236 449 1.6E-33 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS01210 01a4afca153b32a868c96ebe2d4cf396 452 Gene3D G3DSA:2.40.160.20 37 230 4.7E-27 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS01210 01a4afca153b32a868c96ebe2d4cf396 452 PANTHER PTHR34001 1 88 2.3E-55 T 22-04-2016 NHAM_RS01210 01a4afca153b32a868c96ebe2d4cf396 452 PANTHER PTHR34001 294 452 2.3E-55 T 22-04-2016 NHAM_RS01210 01a4afca153b32a868c96ebe2d4cf396 452 SUPERFAMILY SSF56925 36 233 4.79E-21 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS01210 01a4afca153b32a868c96ebe2d4cf396 452 SUPERFAMILY SSF56925 242 447 1.96E-25 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS01210 01a4afca153b32a868c96ebe2d4cf396 452 Pfam PF13505 Outer membrane protein beta-barrel domain 237 444 5.3E-17 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel NHAM_RS01210 01a4afca153b32a868c96ebe2d4cf396 452 Pfam PF13505 Outer membrane protein beta-barrel domain 9 229 1.7E-16 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel NHAM_RS07830 e134f9dc3d8cef994354882d3fc23ed6 172 SUPERFAMILY SSF160369 3 168 3.92E-51 T 22-04-2016 NHAM_RS07830 e134f9dc3d8cef994354882d3fc23ed6 172 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07830 e134f9dc3d8cef994354882d3fc23ed6 172 Pfam PF00466 Ribosomal protein L10 3 98 1.6E-23 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 NHAM_RS07830 e134f9dc3d8cef994354882d3fc23ed6 172 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 22 140 2.0E-9 T 22-04-2016 NHAM_RS07830 e134f9dc3d8cef994354882d3fc23ed6 172 PANTHER PTHR11560 1 168 7.3E-49 T 22-04-2016 NHAM_RS07830 e134f9dc3d8cef994354882d3fc23ed6 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 24.514 T 22-04-2016 IPR022973 Ribosomal protein L10 NHAM_RS18930 7f058fdc82b3c6e8763066b87f8a3296 288 Pfam PF00892 EamA-like transporter family 7 136 9.1E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NHAM_RS18930 7f058fdc82b3c6e8763066b87f8a3296 288 Pfam PF00892 EamA-like transporter family 150 277 2.8E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NHAM_RS18930 7f058fdc82b3c6e8763066b87f8a3296 288 PANTHER PTHR12715:SF7 4 280 4.6E-70 T 22-04-2016 NHAM_RS18930 7f058fdc82b3c6e8763066b87f8a3296 288 PANTHER PTHR12715 4 280 4.6E-70 T 22-04-2016 NHAM_RS18930 7f058fdc82b3c6e8763066b87f8a3296 288 SUPERFAMILY SSF103481 52 138 5.23E-13 T 22-04-2016 NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 SUPERFAMILY SSF57716 13 48 1.2E-11 T 22-04-2016 NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 SMART SM00382 110 330 2.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 412 53.441 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 314 385 6.8E-16 T 22-04-2016 IPR019489 Clp ATPase, C-terminal NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 Gene3D G3DSA:1.10.8.60 314 414 2.1E-36 T 22-04-2016 NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 307 1.8E-50 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 PANTHER PTHR11262 7 417 3.1E-251 T 22-04-2016 NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 2.7E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 SMART SM00994 12 51 1.7E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 407 9.8E-201 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 SMART SM01086 314 409 1.8E-31 T 22-04-2016 IPR019489 Clp ATPase, C-terminal NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 SUPERFAMILY SSF52540 61 394 3.37E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 Gene3D G3DSA:3.40.50.300 291 308 6.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11350 3807bc4402721bdcc20766cd8c670225 424 Gene3D G3DSA:3.40.50.300 64 252 6.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13620 eaf33d677e0bf149379a1c11ddcb23a3 627 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 357 367 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site NHAM_RS13620 eaf33d677e0bf149379a1c11ddcb23a3 627 PANTHER PTHR10795 279 569 4.8E-47 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related NHAM_RS13620 eaf33d677e0bf149379a1c11ddcb23a3 627 Pfam PF00082 Subtilase family 318 558 4.6E-38 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NHAM_RS13620 eaf33d677e0bf149379a1c11ddcb23a3 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 507 523 1.2E-14 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related NHAM_RS13620 eaf33d677e0bf149379a1c11ddcb23a3 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 353 366 1.2E-14 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related NHAM_RS13620 eaf33d677e0bf149379a1c11ddcb23a3 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 318 337 1.2E-14 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related NHAM_RS13620 eaf33d677e0bf149379a1c11ddcb23a3 627 Gene3D G3DSA:3.40.50.200 276 568 2.6E-72 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NHAM_RS13620 eaf33d677e0bf149379a1c11ddcb23a3 627 SUPERFAMILY SSF52743 299 571 6.55E-67 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 NHAM_RS13620 eaf33d677e0bf149379a1c11ddcb23a3 627 PANTHER PTHR10795:SF419 279 569 4.8E-47 T 22-04-2016 NHAM_RS09965 fed67432d184199d1a2508a0b908d0c2 385 Pfam PF02371 Transposase IS116/IS110/IS902 family 256 331 1.4E-11 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS09965 fed67432d184199d1a2508a0b908d0c2 385 Pfam PF01548 Transposase 75 182 3.4E-9 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS09965 fed67432d184199d1a2508a0b908d0c2 385 PANTHER PTHR33055:SF3 73 375 2.4E-25 T 22-04-2016 NHAM_RS09965 fed67432d184199d1a2508a0b908d0c2 385 PANTHER PTHR33055 73 375 2.4E-25 T 22-04-2016 NHAM_RS18970 3499f319598f66864ee86b5790754e08 281 PANTHER PTHR19136:SF52 17 280 3.3E-113 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 NHAM_RS18970 3499f319598f66864ee86b5790754e08 281 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 6 280 2.1E-123 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 NHAM_RS18970 3499f319598f66864ee86b5790754e08 281 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 5 71 1.2E-23 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 NHAM_RS18970 3499f319598f66864ee86b5790754e08 281 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 179 214 6.9E-12 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS18970 3499f319598f66864ee86b5790754e08 281 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 139 170 0.0024 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS18970 3499f319598f66864ee86b5790754e08 281 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 3 281 55.362 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 NHAM_RS18970 3499f319598f66864ee86b5790754e08 281 PANTHER PTHR19136 17 280 3.3E-113 T 22-04-2016 NHAM_RS18970 3499f319598f66864ee86b5790754e08 281 Gene3D G3DSA:2.160.10.10 93 261 2.1E-54 T 22-04-2016 NHAM_RS18970 3499f319598f66864ee86b5790754e08 281 Gene3D G3DSA:1.10.166.10 3 72 1.5E-27 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 NHAM_RS18970 3499f319598f66864ee86b5790754e08 281 SUPERFAMILY SSF51161 17 264 1.34E-63 T 22-04-2016 IPR011004 Trimeric LpxA-like NHAM_RS02740 27b0e6693bce871319910207796dd274 167 PANTHER PTHR11839 9 163 5.7E-33 T 22-04-2016 NHAM_RS02740 27b0e6693bce871319910207796dd274 167 SUPERFAMILY SSF55811 4 162 2.17E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS02740 27b0e6693bce871319910207796dd274 167 Pfam PF00293 NUDIX domain 9 156 1.7E-21 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NHAM_RS02740 27b0e6693bce871319910207796dd274 167 Gene3D G3DSA:3.90.79.10 4 161 4.5E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS02740 27b0e6693bce871319910207796dd274 167 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 3 166 31.92 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH NHAM_RS02740 27b0e6693bce871319910207796dd274 167 PANTHER PTHR11839:SF13 9 163 5.7E-33 T 22-04-2016 NHAM_RS18160 62ae4f57fceb416f8f4fa7000ef375b4 390 Gene3D G3DSA:2.40.50.100 163 198 1.8E-24 T 22-04-2016 NHAM_RS18160 62ae4f57fceb416f8f4fa7000ef375b4 390 Gene3D G3DSA:2.40.50.100 55 88 1.8E-24 T 22-04-2016 NHAM_RS18160 62ae4f57fceb416f8f4fa7000ef375b4 390 PANTHER PTHR30158:SF7 1 388 2.0E-179 T 22-04-2016 NHAM_RS18160 62ae4f57fceb416f8f4fa7000ef375b4 390 PANTHER PTHR30158 1 388 2.0E-179 T 22-04-2016 NHAM_RS18160 62ae4f57fceb416f8f4fa7000ef375b4 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 284 9.2E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS18160 62ae4f57fceb416f8f4fa7000ef375b4 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 32 352 5.0E-8 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS18160 62ae4f57fceb416f8f4fa7000ef375b4 390 SUPERFAMILY SSF111369 44 291 3.27E-74 T 22-04-2016 NHAM_RS18160 62ae4f57fceb416f8f4fa7000ef375b4 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 30 366 3.1E-79 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS07415 9bf29082e2a1ac35d82f226d6821c505 118 PIRSF PIRSF033367 1 118 2.9E-40 T 22-04-2016 IPR017015 Uncharacterised conserved protein UCP033367, VanZ, Bll3170 NHAM_RS07415 9bf29082e2a1ac35d82f226d6821c505 118 Pfam PF04892 VanZ like family 39 103 4.5E-7 T 22-04-2016 IPR006976 VanZ-like NHAM_RS24070 b3e08970919713044f98c218b6549b6e 390 PANTHER PTHR12526 1 390 6.6E-54 T 22-04-2016 NHAM_RS24070 b3e08970919713044f98c218b6549b6e 390 PANTHER PTHR12526:SF399 1 390 6.6E-54 T 22-04-2016 NHAM_RS24070 b3e08970919713044f98c218b6549b6e 390 SUPERFAMILY SSF53756 15 389 1.54E-65 T 22-04-2016 NHAM_RS24070 b3e08970919713044f98c218b6549b6e 390 Gene3D G3DSA:3.40.50.2000 175 367 2.6E-27 T 22-04-2016 NHAM_RS24070 b3e08970919713044f98c218b6549b6e 390 Pfam PF00534 Glycosyl transferases group 1 200 366 4.0E-31 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 NHAM_RS08875 86098a33837e74d298bb237f560f89fb 250 Gene3D G3DSA:3.20.20.70 5 248 6.7E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS08875 86098a33837e74d298bb237f560f89fb 250 PANTHER PTHR21139 5 250 2.1E-105 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 NHAM_RS08875 86098a33837e74d298bb237f560f89fb 250 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 4 249 38.33 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 NHAM_RS08875 86098a33837e74d298bb237f560f89fb 250 Pfam PF00121 Triosephosphate isomerase 7 245 1.0E-80 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 NHAM_RS08875 86098a33837e74d298bb237f560f89fb 250 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 239 3.2E-52 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 NHAM_RS08875 86098a33837e74d298bb237f560f89fb 250 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 NHAM_RS08875 86098a33837e74d298bb237f560f89fb 250 SUPERFAMILY SSF51351 5 248 4.97E-87 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 NHAM_RS02360 bcf46cc66d3de2740b66a31825673bfd 829 Pfam PF08482 ATP-dependent helicase C-terminal 683 815 1.0E-51 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal NHAM_RS02360 bcf46cc66d3de2740b66a31825673bfd 829 Pfam PF00271 Helicase conserved C-terminal domain 214 334 1.0E-10 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS02360 bcf46cc66d3de2740b66a31825673bfd 829 Gene3D G3DSA:3.40.50.300 9 167 1.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02360 bcf46cc66d3de2740b66a31825673bfd 829 SUPERFAMILY SSF52540 25 447 2.52E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02360 bcf46cc66d3de2740b66a31825673bfd 829 SMART SM00490 236 335 4.2E-14 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS02360 bcf46cc66d3de2740b66a31825673bfd 829 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 9 828 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type NHAM_RS02360 bcf46cc66d3de2740b66a31825673bfd 829 SMART SM00487 4 192 6.8E-14 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS02360 bcf46cc66d3de2740b66a31825673bfd 829 Pfam PF04408 Helicase associated domain (HA2) 396 454 4.1E-13 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 NHAM_RS02360 bcf46cc66d3de2740b66a31825673bfd 829 PANTHER PTHR18934 9 454 6.7E-156 T 22-04-2016 NHAM_RS02360 bcf46cc66d3de2740b66a31825673bfd 829 Gene3D G3DSA:3.40.50.300 216 352 6.6E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02360 bcf46cc66d3de2740b66a31825673bfd 829 SMART SM00847 395 485 4.0E-17 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 NHAM_RS02360 bcf46cc66d3de2740b66a31825673bfd 829 PIRSF PIRSF005496 4 829 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type NHAM_RS11565 fe4fd521baced3a9a1c34aebb28d8ed9 494 SUPERFAMILY SSF55931 19 310 2.35E-112 T 22-04-2016 NHAM_RS11565 fe4fd521baced3a9a1c34aebb28d8ed9 494 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 17 493 36.213 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 NHAM_RS11565 fe4fd521baced3a9a1c34aebb28d8ed9 494 PANTHER PTHR11659:SF0 17 492 4.5E-248 T 22-04-2016 NHAM_RS11565 fe4fd521baced3a9a1c34aebb28d8ed9 494 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 17 492 9.2E-156 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 NHAM_RS11565 fe4fd521baced3a9a1c34aebb28d8ed9 494 SUPERFAMILY SSF89095 311 421 4.54E-31 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 NHAM_RS11565 fe4fd521baced3a9a1c34aebb28d8ed9 494 PANTHER PTHR11659 17 492 4.5E-248 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 NHAM_RS11565 fe4fd521baced3a9a1c34aebb28d8ed9 494 Pfam PF02934 GatB/GatE catalytic domain 20 303 3.2E-112 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 NHAM_RS11565 fe4fd521baced3a9a1c34aebb28d8ed9 494 SMART SM00845 342 492 6.3E-72 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 NHAM_RS11565 fe4fd521baced3a9a1c34aebb28d8ed9 494 Pfam PF02637 GatB domain 352 492 3.6E-46 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 NHAM_RS11565 fe4fd521baced3a9a1c34aebb28d8ed9 494 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 159 173 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 NHAM_RS07765 74a42edadf8546cc7e6429925d09b0cc 264 Gene3D G3DSA:3.30.1150.10 150 262 4.6E-23 T 22-04-2016 NHAM_RS07765 74a42edadf8546cc7e6429925d09b0cc 264 PANTHER PTHR33446 76 262 2.7E-15 T 22-04-2016 NHAM_RS07765 74a42edadf8546cc7e6429925d09b0cc 264 SUPERFAMILY SSF74653 150 262 2.22E-22 T 22-04-2016 NHAM_RS07765 74a42edadf8546cc7e6429925d09b0cc 264 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 186 260 7.0E-14 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 NHAM_RS07765 74a42edadf8546cc7e6429925d09b0cc 264 Pfam PF13103 TonB C terminal 171 247 6.8E-11 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 NHAM_RS07765 74a42edadf8546cc7e6429925d09b0cc 264 PANTHER PTHR33446:SF2 76 262 2.7E-15 T 22-04-2016 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 153 164 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 212 220 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 150 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 SUPERFAMILY SSF63380 3 105 2.33E-23 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 PANTHER PTHR19370 1 264 7.8E-52 T 22-04-2016 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 Gene3D G3DSA:2.40.30.10 3 95 4.4E-22 T 22-04-2016 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 SUPERFAMILY SSF54292 262 357 5.9E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 SUPERFAMILY SSF52343 94 242 4.85E-35 T 22-04-2016 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 Gene3D G3DSA:3.40.50.80 96 237 2.2E-38 T 22-04-2016 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 Gene3D G3DSA:3.10.20.30 238 357 4.4E-31 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 PANTHER PTHR19370:SF93 1 264 7.8E-52 T 22-04-2016 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 273 347 1.3E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 PRINTS PR00406 Cytochrome B5 reductase signature 116 135 1.3E-10 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 PRINTS PR00406 Cytochrome B5 reductase signature 153 164 1.3E-10 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 PRINTS PR00406 Cytochrome B5 reductase signature 212 220 1.3E-10 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 PRINTS PR00406 Cytochrome B5 reductase signature 91 105 1.3E-10 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 Pfam PF00970 Oxidoreductase FAD-binding domain 8 103 1.4E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 Pfam PF00175 Oxidoreductase NAD-binding domain 119 225 2.0E-18 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NHAM_RS04790 484ff6e774246a4f64f956fc1985f74f 358 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 305 313 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NHAM_RS15935 9b6e9c034aeb583c276ce726ac9cdb3b 278 PIRSF PIRSF000193 15 278 2.2E-58 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 NHAM_RS15935 9b6e9c034aeb583c276ce726ac9cdb3b 278 PANTHER PTHR11645 21 278 6.8E-82 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 NHAM_RS15935 9b6e9c034aeb583c276ce726ac9cdb3b 278 PANTHER PTHR11645:SF0 21 278 6.8E-82 T 22-04-2016 NHAM_RS15935 9b6e9c034aeb583c276ce726ac9cdb3b 278 SUPERFAMILY SSF51735 16 168 8.31E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15935 9b6e9c034aeb583c276ce726ac9cdb3b 278 Gene3D G3DSA:1.10.3730.10 170 276 1.3E-35 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 NHAM_RS15935 9b6e9c034aeb583c276ce726ac9cdb3b 278 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 15 276 24.711 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 NHAM_RS15935 9b6e9c034aeb583c276ce726ac9cdb3b 278 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 18 109 3.9E-9 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal NHAM_RS15935 9b6e9c034aeb583c276ce726ac9cdb3b 278 SUPERFAMILY SSF48179 170 277 1.87E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS15935 9b6e9c034aeb583c276ce726ac9cdb3b 278 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 171 276 1.8E-34 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 NHAM_RS15935 9b6e9c034aeb583c276ce726ac9cdb3b 278 Gene3D G3DSA:3.40.50.720 16 168 8.8E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15935 9b6e9c034aeb583c276ce726ac9cdb3b 278 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 18 276 2.3E-72 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 327 498 5.8E-46 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 SUPERFAMILY SSF48179 502 605 5.7E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 SUPERFAMILY SSF52096 26 318 1.08E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 PANTHER PTHR23309 29 693 0.0 T 22-04-2016 NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 502 596 1.7E-26 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 PANTHER PTHR23309:SF11 29 693 0.0 T 22-04-2016 NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 Gene3D G3DSA:3.90.226.10 24 221 1.2E-55 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 Pfam PF00378 Enoyl-CoA hydratase/isomerase 36 217 5.7E-30 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 SUPERFAMILY SSF48179 614 690 1.87E-15 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 Gene3D G3DSA:3.40.50.720 314 503 3.9E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 Gene3D G3DSA:1.10.1040.10 616 688 8.7E-8 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 Gene3D G3DSA:1.10.1040.10 504 596 6.0E-28 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NHAM_RS05540 fcde7af49036ace266ac981979f81423 696 SUPERFAMILY SSF51735 323 498 4.87E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05520 4ba7aa1d00b0eba2d5c19180d41f7dc5 203 SUPERFAMILY SSF46689 3 87 4.46E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS05520 4ba7aa1d00b0eba2d5c19180d41f7dc5 203 PANTHER PTHR30055 1 198 4.5E-75 T 22-04-2016 NHAM_RS05520 4ba7aa1d00b0eba2d5c19180d41f7dc5 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 3.9E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS05520 4ba7aa1d00b0eba2d5c19180d41f7dc5 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 9.6E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS05520 4ba7aa1d00b0eba2d5c19180d41f7dc5 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 9.6E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS05520 4ba7aa1d00b0eba2d5c19180d41f7dc5 203 SUPERFAMILY SSF48498 85 199 1.67E-7 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NHAM_RS05520 4ba7aa1d00b0eba2d5c19180d41f7dc5 203 PANTHER PTHR30055:SF60 1 198 4.5E-75 T 22-04-2016 NHAM_RS05520 4ba7aa1d00b0eba2d5c19180d41f7dc5 203 Gene3D G3DSA:1.10.357.10 9 201 1.5E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NHAM_RS01130 b4a0eddd79cfce37ecd7a867a04ead3e 131 Hamap MF_00791 Protein ApaG [apaG]. 2 131 31.977 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG NHAM_RS01130 b4a0eddd79cfce37ecd7a867a04ead3e 131 Gene3D G3DSA:2.60.40.1470 3 125 1.9E-47 T 22-04-2016 IPR007474 ApaG domain NHAM_RS01130 b4a0eddd79cfce37ecd7a867a04ead3e 131 SUPERFAMILY SSF110069 5 126 5.1E-47 T 22-04-2016 IPR007474 ApaG domain NHAM_RS01130 b4a0eddd79cfce37ecd7a867a04ead3e 131 Pfam PF04379 Protein of unknown function (DUF525) 20 104 7.0E-35 T 22-04-2016 IPR007474 ApaG domain NHAM_RS01130 b4a0eddd79cfce37ecd7a867a04ead3e 131 PANTHER PTHR14289 4 131 2.4E-56 T 22-04-2016 NHAM_RS13085 ed2c2fe4d0b2ae603340a678e1560039 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 3.4E-30 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NHAM_RS13085 ed2c2fe4d0b2ae603340a678e1560039 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 376 2.7E-46 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS13085 ed2c2fe4d0b2ae603340a678e1560039 381 Gene3D G3DSA:1.10.540.10 1 117 2.1E-40 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NHAM_RS13085 ed2c2fe4d0b2ae603340a678e1560039 381 SUPERFAMILY SSF47203 226 378 4.03E-56 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS13085 ed2c2fe4d0b2ae603340a678e1560039 381 Gene3D G3DSA:2.40.110.10 121 216 8.2E-39 T 22-04-2016 NHAM_RS13085 ed2c2fe4d0b2ae603340a678e1560039 381 Gene3D G3DSA:1.20.140.10 217 378 1.9E-64 T 22-04-2016 NHAM_RS13085 ed2c2fe4d0b2ae603340a678e1560039 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NHAM_RS13085 ed2c2fe4d0b2ae603340a678e1560039 381 SUPERFAMILY SSF56645 2 240 1.13E-80 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NHAM_RS13085 ed2c2fe4d0b2ae603340a678e1560039 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 214 5.7E-26 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NHAM_RS13085 ed2c2fe4d0b2ae603340a678e1560039 381 PANTHER PTHR10909:SF305 1 381 9.2E-186 T 22-04-2016 NHAM_RS13085 ed2c2fe4d0b2ae603340a678e1560039 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NHAM_RS13085 ed2c2fe4d0b2ae603340a678e1560039 381 PANTHER PTHR10909 1 381 9.2E-186 T 22-04-2016 NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 Pfam PF13188 PAS domain 668 718 4.3E-7 T 22-04-2016 IPR000014 PAS domain NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 Pfam PF13188 PAS domain 552 582 3.9E-4 T 22-04-2016 IPR000014 PAS domain NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 PANTHER PTHR24423 15 142 5.2E-94 T 22-04-2016 NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 PANTHER PTHR24423 662 1027 5.2E-94 T 22-04-2016 NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 PANTHER PTHR24423:SF421 15 142 5.2E-94 T 22-04-2016 NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 PANTHER PTHR24423:SF421 662 1027 5.2E-94 T 22-04-2016 NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 Gene3D G3DSA:1.10.287.130 792 853 4.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 SUPERFAMILY SSF47384 784 869 2.94E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 SUPERFAMILY SSF55874 857 1022 1.11E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 SUPERFAMILY SSF55785 675 787 1.37E-16 T 22-04-2016 IPR000014 PAS domain NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 SMART SM00091 547 614 23.0 T 22-04-2016 IPR000014 PAS domain NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 SMART SM00091 131 203 170.0 T 22-04-2016 IPR000014 PAS domain NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 SMART SM00091 664 730 5.7E-9 T 22-04-2016 IPR000014 PAS domain NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 665 786 6.6E-13 T 22-04-2016 IPR000014 PAS domain NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 SMART SM00388 799 868 9.1E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 Gene3D G3DSA:3.30.565.10 854 1022 7.5E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 Pfam PF00512 His Kinase A (phospho-acceptor) domain 800 868 1.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 915 1022 2.8E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 Gene3D G3DSA:3.30.450.20 664 776 7.1E-14 T 22-04-2016 NHAM_RS06370 2dd784271061fb60fab67f70cb2a4ec3 1031 SMART SM00387 914 1026 7.9E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17630 76d485e3296d0d771c48cb32b310b923 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 9.4E-24 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS17630 76d485e3296d0d771c48cb32b310b923 69 SMART SM00357 3 69 6.9E-25 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS17630 76d485e3296d0d771c48cb32b310b923 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site NHAM_RS17630 76d485e3296d0d771c48cb32b310b923 69 Gene3D G3DSA:2.40.50.140 1 66 2.0E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS17630 76d485e3296d0d771c48cb32b310b923 69 PRINTS PR00050 Cold shock protein signature 40 58 5.8E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS17630 76d485e3296d0d771c48cb32b310b923 69 PRINTS PR00050 Cold shock protein signature 25 34 5.8E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS17630 76d485e3296d0d771c48cb32b310b923 69 PRINTS PR00050 Cold shock protein signature 4 19 5.8E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS17630 76d485e3296d0d771c48cb32b310b923 69 PANTHER PTHR11544 1 51 2.8E-21 T 22-04-2016 NHAM_RS17630 76d485e3296d0d771c48cb32b310b923 69 PIRSF PIRSF002599 1 68 7.2E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 NHAM_RS17630 76d485e3296d0d771c48cb32b310b923 69 SUPERFAMILY SSF50249 1 67 8.36E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS01455 b2940aeade4d6204041a7c51d175b694 164 Pfam PF06793 Uncharacterised protein family (UPF0262) 12 163 1.4E-71 T 22-04-2016 IPR008321 Uncharacterised conserved protein UCP032146 NHAM_RS01455 b2940aeade4d6204041a7c51d175b694 164 PIRSF PIRSF032146 4 164 6.2E-81 T 22-04-2016 IPR008321 Uncharacterised conserved protein UCP032146 NHAM_RS01455 b2940aeade4d6204041a7c51d175b694 164 Hamap MF_00678 UPF0262 protein . 11 163 40.395 T 22-04-2016 IPR008321 Uncharacterised conserved protein UCP032146 NHAM_RS20425 e3e008f34a1dab488eb3ccfe26d0d40b 69 SUPERFAMILY SSF69047 1 66 6.28E-26 T 22-04-2016 IPR008462 CsbD-like NHAM_RS20425 e3e008f34a1dab488eb3ccfe26d0d40b 69 Pfam PF05532 CsbD-like 4 56 7.1E-23 T 22-04-2016 IPR008462 CsbD-like NHAM_RS20425 e3e008f34a1dab488eb3ccfe26d0d40b 69 PIRSF PIRSF039008 1 66 6.5E-31 T 22-04-2016 IPR026042 Stress response protein YjbJ NHAM_RS20425 e3e008f34a1dab488eb3ccfe26d0d40b 69 PANTHER PTHR34977 1 69 1.3E-15 T 22-04-2016 NHAM_RS20425 e3e008f34a1dab488eb3ccfe26d0d40b 69 Gene3D G3DSA:1.10.1470.10 1 64 6.3E-31 T 22-04-2016 IPR008462 CsbD-like NHAM_RS11005 2faafafdfe3efc33f8a2074ccbbbfdd7 231 Pfam PF01569 PAP2 superfamily 67 181 8.8E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS11005 2faafafdfe3efc33f8a2074ccbbbfdd7 231 SUPERFAMILY SSF48317 5 195 1.7E-25 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS11005 2faafafdfe3efc33f8a2074ccbbbfdd7 231 SMART SM00014 64 177 0.0024 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS11005 2faafafdfe3efc33f8a2074ccbbbfdd7 231 Gene3D G3DSA:1.20.144.10 4 192 2.8E-18 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS07875 3cb02c2db00b746dc52c12436cd2b1be 236 SUPERFAMILY SSF51206 7 135 3.87E-7 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like NHAM_RS07875 3cb02c2db00b746dc52c12436cd2b1be 236 SUPERFAMILY SSF46785 147 219 4.21E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS07875 3cb02c2db00b746dc52c12436cd2b1be 236 Pfam PF13545 Crp-like helix-turn-helix domain 147 213 4.6E-14 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS07875 3cb02c2db00b746dc52c12436cd2b1be 236 Gene3D G3DSA:1.10.10.10 147 214 5.0E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS07875 3cb02c2db00b746dc52c12436cd2b1be 236 PANTHER PTHR24567 1 230 1.7E-57 T 22-04-2016 NHAM_RS07875 3cb02c2db00b746dc52c12436cd2b1be 236 Gene3D G3DSA:2.60.120.10 8 124 1.3E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS07875 3cb02c2db00b746dc52c12436cd2b1be 236 PANTHER PTHR24567:SF22 1 230 1.7E-57 T 22-04-2016 NHAM_RS02000 a9e6edf502f05515546f0fcfec71c923 281 Pfam PF00877 NlpC/P60 family 171 254 9.9E-17 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS02000 a9e6edf502f05515546f0fcfec71c923 281 PANTHER PTHR21666 161 262 5.1E-14 T 22-04-2016 NHAM_RS02000 a9e6edf502f05515546f0fcfec71c923 281 Gene3D G3DSA:2.30.30.40 58 88 1.4E-4 T 22-04-2016 NHAM_RS02000 a9e6edf502f05515546f0fcfec71c923 281 SUPERFAMILY SSF54001 148 272 2.45E-31 T 22-04-2016 NHAM_RS02000 a9e6edf502f05515546f0fcfec71c923 281 Gene3D G3DSA:3.90.1720.10 150 279 1.7E-27 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS02000 a9e6edf502f05515546f0fcfec71c923 281 SUPERFAMILY SSF50044 58 93 1.64E-5 T 22-04-2016 IPR001452 SH3 domain GO:0005515 NHAM_RS09190 3507b2bab099d6616a32e4831487cb4f 320 PANTHER PTHR13779 36 222 1.2E-88 T 22-04-2016 NHAM_RS09190 3507b2bab099d6616a32e4831487cb4f 320 PANTHER PTHR13779 245 318 1.2E-88 T 22-04-2016 NHAM_RS09190 3507b2bab099d6616a32e4831487cb4f 320 SUPERFAMILY SSF52540 79 286 2.25E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09190 3507b2bab099d6616a32e4831487cb4f 320 Pfam PF05673 Protein of unknown function (DUF815) 67 313 3.1E-105 T 22-04-2016 IPR008533 Domain of unknown function DUF815 NHAM_RS09190 3507b2bab099d6616a32e4831487cb4f 320 Gene3D G3DSA:3.40.50.300 104 227 3.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09190 3507b2bab099d6616a32e4831487cb4f 320 PANTHER PTHR13779:SF28 36 222 1.2E-88 T 22-04-2016 NHAM_RS09190 3507b2bab099d6616a32e4831487cb4f 320 PANTHER PTHR13779:SF28 245 318 1.2E-88 T 22-04-2016 NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 SMART SM01350 186 335 1.1E-5 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 SUPERFAMILY SSF48179 184 318 3.88E-39 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 154 2.7E-40 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 259 286 5.2E-19 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 23 5.2E-19 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 175 203 5.2E-19 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 SUPERFAMILY SSF51735 1 160 3.86E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 323 1.6E-118 T 22-04-2016 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 186 304 1.3E-19 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 PANTHER PTHR11811:SF28 1 323 2.5E-160 T 22-04-2016 NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 Gene3D G3DSA:3.40.50.720 1 187 9.7E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 PANTHER PTHR11811 1 323 2.5E-160 T 22-04-2016 NHAM_RS16755 0e9e7bbfb01c5395a23bb5e1cb88e120 337 Gene3D G3DSA:1.10.1040.10 188 319 5.1E-35 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NHAM_RS16420 e06915dda9a81c10a978ed0e6de6ed89 497 Pfam PF01565 FAD binding domain 54 192 1.7E-37 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NHAM_RS16420 e06915dda9a81c10a978ed0e6de6ed89 497 Gene3D G3DSA:1.10.45.10 430 469 1.3E-6 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NHAM_RS16420 e06915dda9a81c10a978ed0e6de6ed89 497 SUPERFAMILY SSF56176 17 229 5.14E-71 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NHAM_RS16420 e06915dda9a81c10a978ed0e6de6ed89 497 Pfam PF02913 FAD linked oxidases, C-terminal domain 228 469 3.9E-64 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NHAM_RS16420 e06915dda9a81c10a978ed0e6de6ed89 497 Gene3D G3DSA:3.30.43.10 14 107 1.5E-26 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NHAM_RS16420 e06915dda9a81c10a978ed0e6de6ed89 497 Gene3D G3DSA:3.30.465.10 109 229 1.8E-34 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NHAM_RS16420 e06915dda9a81c10a978ed0e6de6ed89 497 SUPERFAMILY SSF55103 202 471 7.52E-69 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NHAM_RS16420 e06915dda9a81c10a978ed0e6de6ed89 497 PANTHER PTHR11748 3 481 7.6E-209 T 22-04-2016 NHAM_RS16420 e06915dda9a81c10a978ed0e6de6ed89 497 PANTHER PTHR11748:SF78 3 481 7.6E-209 T 22-04-2016 NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 SUPERFAMILY SSF53686 3 462 2.16E-153 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 Pfam PF14821 Threonine synthase N terminus 3 81 1.3E-25 T 22-04-2016 IPR029144 Threonine synthase, N-terminal NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 PANTHER PTHR10314:SF1 26 37 3.9E-150 T 22-04-2016 NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 PANTHER PTHR10314:SF1 362 468 3.9E-150 T 22-04-2016 NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 Gene3D G3DSA:3.40.50.1100 112 203 9.0E-12 T 22-04-2016 NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 102 401 2.6E-20 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 103 117 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 PANTHER PTHR10314:SF1 54 330 3.9E-150 T 22-04-2016 NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 Gene3D G3DSA:3.90.1380.10 3 86 2.9E-26 T 22-04-2016 IPR029144 Threonine synthase, N-terminal NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 PANTHER PTHR10314 54 330 3.9E-150 T 22-04-2016 NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 TIGRFAM TIGR00260 thrC: threonine synthase 69 427 1.0E-81 T 22-04-2016 IPR004450 Threonine synthase-like NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 Gene3D G3DSA:3.40.50.1100 204 436 1.4E-91 T 22-04-2016 NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 PANTHER PTHR10314 362 468 3.9E-150 T 22-04-2016 NHAM_RS01320 ad180f9a82a47c0c9573b695a10e74f7 472 PANTHER PTHR10314 26 37 3.9E-150 T 22-04-2016 NHAM_RS00720 f03d60f9a94a4c457f13a8bba0a28813 214 PANTHER PTHR32039:SF7 1 214 2.8E-89 T 22-04-2016 IPR004482 Mg chelatase-related protein NHAM_RS00720 f03d60f9a94a4c457f13a8bba0a28813 214 Gene3D G3DSA:3.30.230.10 5 167 6.5E-28 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS00720 f03d60f9a94a4c457f13a8bba0a28813 214 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 214 5.4E-7 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain NHAM_RS00720 f03d60f9a94a4c457f13a8bba0a28813 214 PANTHER PTHR32039 1 214 2.8E-89 T 22-04-2016 NHAM_RS00720 f03d60f9a94a4c457f13a8bba0a28813 214 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 139 2.6E-41 T 22-04-2016 NHAM_RS00720 f03d60f9a94a4c457f13a8bba0a28813 214 SUPERFAMILY SSF54211 8 169 9.48E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 SUPERFAMILY SSF50249 56 120 8.78E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 PANTHER PTHR11544:SF43 2 222 2.1E-107 T 22-04-2016 NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 Gene3D G3DSA:2.40.50.140 57 119 1.2E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 Gene3D G3DSA:2.40.50.140 151 211 1.7E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 SMART SM00357 149 213 1.7E-10 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 SMART SM00357 57 121 3.9E-10 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 Pfam PF00313 'Cold-shock' DNA-binding domain 57 116 5.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 Pfam PF00313 'Cold-shock' DNA-binding domain 149 211 4.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 SUPERFAMILY SSF50249 148 211 1.59E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 PANTHER PTHR11544 2 222 2.1E-107 T 22-04-2016 NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 PRINTS PR00050 Cold shock protein signature 94 112 1.2E-6 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 PRINTS PR00050 Cold shock protein signature 79 88 1.2E-6 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10895 c18ade2e346ce67e2e9931b2b902de81 222 PRINTS PR00050 Cold shock protein signature 58 73 1.2E-6 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS19525 78da5b8bbb7f37f395496b48da5b79bb 117 PANTHER PTHR36455 2 117 7.0E-60 T 22-04-2016 NHAM_RS19525 78da5b8bbb7f37f395496b48da5b79bb 117 Pfam PF05717 IS66 Orf2 like protein 9 105 2.2E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 NHAM_RS19525 78da5b8bbb7f37f395496b48da5b79bb 117 PANTHER PTHR36455:SF1 2 117 7.0E-60 T 22-04-2016 NHAM_RS15145 2f5541cb8b2192c9cf673519b3b0df3c 298 Gene3D G3DSA:3.40.1160.10 62 290 4.2E-24 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS15145 2f5541cb8b2192c9cf673519b3b0df3c 298 Pfam PF00696 Amino acid kinase family 60 258 1.0E-19 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS15145 2f5541cb8b2192c9cf673519b3b0df3c 298 SUPERFAMILY SSF53633 61 290 5.37E-29 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS15145 2f5541cb8b2192c9cf673519b3b0df3c 298 PIRSF PIRSF039097 22 292 8.4E-100 T 22-04-2016 IPR030669 Molybdenum storage protein subunit alpha/beta GO:0005737|GO:0030151 NHAM_RS09320 687a080e013044440521d7d53eb00c47 1039 Hamap MF_00970 Ribonuclease E [rne]. 5 1034 32.16 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 NHAM_RS09320 687a080e013044440521d7d53eb00c47 1039 SUPERFAMILY SSF50249 43 84 5.9E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS09320 687a080e013044440521d7d53eb00c47 1039 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 336 685 1.3E-131 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 NHAM_RS09320 687a080e013044440521d7d53eb00c47 1039 Pfam PF10150 Ribonuclease E/G family 381 652 4.9E-92 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 NHAM_RS09320 687a080e013044440521d7d53eb00c47 1039 Gene3D G3DSA:2.40.50.140 34 86 8.8E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS09320 687a080e013044440521d7d53eb00c47 1039 Gene3D G3DSA:2.40.50.140 343 385 8.8E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS09320 687a080e013044440521d7d53eb00c47 1039 PANTHER PTHR30001 6 124 1.2E-265 T 22-04-2016 NHAM_RS09320 687a080e013044440521d7d53eb00c47 1039 PANTHER PTHR30001 331 1039 1.2E-265 T 22-04-2016 NHAM_RS09320 687a080e013044440521d7d53eb00c47 1039 PANTHER PTHR30001:SF1 6 124 1.2E-265 T 22-04-2016 NHAM_RS09320 687a080e013044440521d7d53eb00c47 1039 PANTHER PTHR30001:SF1 331 1039 1.2E-265 T 22-04-2016 NHAM_RS23155 350488314b76b12053b56e2c027c9828 207 SUPERFAMILY SSF54211 10 178 3.03E-57 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS23155 350488314b76b12053b56e2c027c9828 207 PANTHER PTHR10169 7 207 3.6E-71 T 22-04-2016 NHAM_RS23155 350488314b76b12053b56e2c027c9828 207 Gene3D G3DSA:3.40.50.670 177 207 3.7E-5 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS23155 350488314b76b12053b56e2c027c9828 207 Gene3D G3DSA:3.30.230.10 9 176 8.0E-70 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS23155 350488314b76b12053b56e2c027c9828 207 SMART SM00433 1 207 2.4E-5 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS23155 350488314b76b12053b56e2c027c9828 207 Pfam PF00204 DNA gyrase B 10 177 3.2E-55 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS23155 350488314b76b12053b56e2c027c9828 207 PRINTS PR01159 DNA gyrase subunit B signature 147 161 8.9E-35 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS23155 350488314b76b12053b56e2c027c9828 207 PRINTS PR01159 DNA gyrase subunit B signature 99 115 8.9E-35 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS23155 350488314b76b12053b56e2c027c9828 207 PRINTS PR01159 DNA gyrase subunit B signature 9 31 8.9E-35 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS23155 350488314b76b12053b56e2c027c9828 207 PRINTS PR01159 DNA gyrase subunit B signature 161 181 8.9E-35 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 3.8E-98 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.1E-260 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 SUPERFAMILY SSF48592 406 522 5.66E-77 T 22-04-2016 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 SUPERFAMILY SSF48592 7 134 5.66E-77 T 22-04-2016 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 PANTHER PTHR11353 3 546 4.3E-261 T 22-04-2016 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 SUPERFAMILY SSF52029 184 376 5.76E-86 T 22-04-2016 IPR027409 GroEL-like apical domain NHAM_RS13275 8d482b803623011be41bf8089319794b 546 Gene3D G3DSA:1.10.560.10 367 519 4.6E-45 T 22-04-2016 IPR027413 GroEL-like equatorial domain NHAM_RS13275 8d482b803623011be41bf8089319794b 546 Gene3D G3DSA:1.10.560.10 3 188 6.1E-46 T 22-04-2016 IPR027413 GroEL-like equatorial domain NHAM_RS13275 8d482b803623011be41bf8089319794b 546 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 SUPERFAMILY SSF54849 138 207 1.97E-23 T 22-04-2016 NHAM_RS13275 8d482b803623011be41bf8089319794b 546 Gene3D G3DSA:3.50.7.10 189 366 2.7E-102 T 22-04-2016 IPR027409 GroEL-like apical domain NHAM_RS13275 8d482b803623011be41bf8089319794b 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 42.146 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS05390 af7a807908a4138204d0d40a0b9afd2f 355 SUPERFAMILY SSF51735 2 341 6.93E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05390 af7a807908a4138204d0d40a0b9afd2f 355 PANTHER PTHR10366:SF41 7 354 1.7E-155 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NHAM_RS05390 af7a807908a4138204d0d40a0b9afd2f 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 8 341 1.1E-142 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NHAM_RS05390 af7a807908a4138204d0d40a0b9afd2f 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 327 2.1E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05390 af7a807908a4138204d0d40a0b9afd2f 355 Gene3D G3DSA:3.90.25.10 196 339 2.3E-53 T 22-04-2016 NHAM_RS05390 af7a807908a4138204d0d40a0b9afd2f 355 PANTHER PTHR10366 7 354 1.7E-155 T 22-04-2016 NHAM_RS05390 af7a807908a4138204d0d40a0b9afd2f 355 Gene3D G3DSA:3.40.50.720 3 195 6.1E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11950 3c0de121f87f244fcbf5e79c3b445704 287 Gene3D G3DSA:1.10.8.100 213 279 4.6E-19 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like NHAM_RS11950 3c0de121f87f244fcbf5e79c3b445704 287 SUPERFAMILY SSF53335 15 280 1.53E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS11950 3c0de121f87f244fcbf5e79c3b445704 287 Pfam PF00398 Ribosomal RNA adenine dimethylase 20 278 6.0E-45 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm NHAM_RS11950 3c0de121f87f244fcbf5e79c3b445704 287 PANTHER PTHR11727 4 286 6.2E-85 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm NHAM_RS11950 3c0de121f87f244fcbf5e79c3b445704 287 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 278 50.248 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 NHAM_RS11950 3c0de121f87f244fcbf5e79c3b445704 287 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 51 79 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 NHAM_RS11950 3c0de121f87f244fcbf5e79c3b445704 287 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 276 1.4E-65 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 NHAM_RS11950 3c0de121f87f244fcbf5e79c3b445704 287 SMART SM00650 35 211 1.6E-63 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 NHAM_RS11950 3c0de121f87f244fcbf5e79c3b445704 287 Gene3D G3DSA:3.40.50.150 4 212 2.2E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 19 208 2.0E-38 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 Gene3D G3DSA:3.40.50.300 316 505 7.4E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 Gene3D G3DSA:3.30.230.10 596 775 7.6E-73 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 PANTHER PTHR10046:SF43 20 781 0.0 T 22-04-2016 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 Gene3D G3DSA:1.10.8.60 506 589 4.8E-30 T 22-04-2016 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 TIGRFAM TIGR00763 lon: endopeptidase La 20 776 4.8E-302 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 600 616 7.2E-56 T 22-04-2016 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 678 697 7.2E-56 T 22-04-2016 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 362 381 7.2E-56 T 22-04-2016 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 708 727 7.2E-56 T 22-04-2016 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 731 749 7.2E-56 T 22-04-2016 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 358 494 2.8E-19 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 PANTHER PTHR10046 20 781 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 681 689 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 SMART SM00464 17 209 3.4E-74 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 PIRSF PIRSF001174 7 780 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 Hamap MF_01973 Lon protease [lon]. 18 777 71.298 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 SUPERFAMILY SSF52540 322 591 1.43E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 SMART SM00382 354 506 1.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 SUPERFAMILY SSF88697 19 208 1.57E-44 T 22-04-2016 IPR015947 PUA-like domain NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 SUPERFAMILY SSF54211 600 775 5.69E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS11345 d59c512b7f72a30643aad11214ed8094 807 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 574 777 2.4E-95 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 NHAM_RS05650 8b7fe9d4a006c977ca7c1963170c42be 91 Pfam PF13560 Helix-turn-helix domain 7 60 9.3E-7 T 22-04-2016 NHAM_RS05650 8b7fe9d4a006c977ca7c1963170c42be 91 SUPERFAMILY SSF47413 6 66 9.85E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS05650 8b7fe9d4a006c977ca7c1963170c42be 91 SMART SM00530 6 63 8.7E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS05650 8b7fe9d4a006c977ca7c1963170c42be 91 Gene3D G3DSA:1.10.260.40 7 66 9.5E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 SUPERFAMILY SSF50494 22 227 4.04E-53 T 22-04-2016 IPR009003 Peptidase S1, PA clan NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 Gene3D G3DSA:2.40.10.10 17 112 4.3E-25 T 22-04-2016 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 PANTHER PTHR22939:SF77 5 318 1.4E-89 T 22-04-2016 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 Pfam PF13180 PDZ domain 239 306 6.2E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 SUPERFAMILY SSF50156 193 315 1.14E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 Gene3D G3DSA:2.30.42.10 224 317 1.5E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 PRINTS PR00834 HtrA/DegQ protease family signature 178 195 1.9E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 PRINTS PR00834 HtrA/DegQ protease family signature 119 143 1.9E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 PRINTS PR00834 HtrA/DegQ protease family signature 156 173 1.9E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 PRINTS PR00834 HtrA/DegQ protease family signature 263 275 1.9E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 PRINTS PR00834 HtrA/DegQ protease family signature 79 99 1.9E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 PRINTS PR00834 HtrA/DegQ protease family signature 58 70 1.9E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 Pfam PF13365 Trypsin-like peptidase domain 49 185 9.9E-31 T 22-04-2016 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 Gene3D G3DSA:2.40.10.10 113 223 1.7E-38 T 22-04-2016 NHAM_RS09600 27b8be166ca48c4032ab05c5adf904f8 318 PANTHER PTHR22939 5 318 1.4E-89 T 22-04-2016 NHAM_RS10740 52b99c968205a4ebd7fba6bb7f918c23 382 Hamap MF_01899 Ribonuclease D [rnd]. 1 364 44.889 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 NHAM_RS10740 52b99c968205a4ebd7fba6bb7f918c23 382 Pfam PF00570 HRDC domain 212 275 2.7E-10 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 NHAM_RS10740 52b99c968205a4ebd7fba6bb7f918c23 382 SUPERFAMILY SSF47819 189 297 3.27E-21 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 NHAM_RS10740 52b99c968205a4ebd7fba6bb7f918c23 382 PANTHER PTHR12124 350 360 3.2E-60 T 22-04-2016 NHAM_RS10740 52b99c968205a4ebd7fba6bb7f918c23 382 PANTHER PTHR12124 3 284 3.2E-60 T 22-04-2016 NHAM_RS10740 52b99c968205a4ebd7fba6bb7f918c23 382 Pfam PF01612 3'-5' exonuclease 3 169 6.4E-36 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 NHAM_RS10740 52b99c968205a4ebd7fba6bb7f918c23 382 TIGRFAM TIGR01388 rnd: ribonuclease D 3 363 2.6E-119 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 NHAM_RS10740 52b99c968205a4ebd7fba6bb7f918c23 382 SMART SM00474 1 170 1.0E-30 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 NHAM_RS10740 52b99c968205a4ebd7fba6bb7f918c23 382 SUPERFAMILY SSF47819 302 366 4.91E-11 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 NHAM_RS10740 52b99c968205a4ebd7fba6bb7f918c23 382 Gene3D G3DSA:3.30.420.10 3 184 6.5E-18 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS10740 52b99c968205a4ebd7fba6bb7f918c23 382 SUPERFAMILY SSF53098 3 203 5.84E-66 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS19320 51d8b4f5db1d9ef02264be4d42789452 250 PIRSF PIRSF034285 1 250 1.5E-82 T 22-04-2016 IPR017026 Inducible mutagenesis protein A NHAM_RS19320 51d8b4f5db1d9ef02264be4d42789452 250 SUPERFAMILY SSF52540 48 165 1.95E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19320 51d8b4f5db1d9ef02264be4d42789452 250 Gene3D G3DSA:3.40.50.300 74 164 1.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 Gene3D G3DSA:3.40.50.300 7 261 1.2E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 Gene3D G3DSA:3.40.50.300 280 529 2.5E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 Pfam PF00005 ABC transporter 29 187 2.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 Pfam PF00005 ABC transporter 306 457 1.0E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 SMART SM00382 37 237 5.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 SMART SM00382 314 506 6.3E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 PANTHER PTHR24220 10 414 3.8E-194 T 22-04-2016 NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 268 8.4E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 508 536 0.0012 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 SUPERFAMILY SSF52540 8 259 8.91E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 SUPERFAMILY SSF52540 279 528 6.35E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01995 0a6342053d872288c2f31f2388ffcaba 543 PANTHER PTHR24220:SF574 10 414 3.8E-194 T 22-04-2016 NHAM_RS09040 e964b52d0b87a7d491ccc437582272ec 154 SUPERFAMILY SSF50891 8 150 1.45E-49 T 22-04-2016 IPR029000 Cyclophilin-like domain NHAM_RS09040 e964b52d0b87a7d491ccc437582272ec 154 PIRSF PIRSF001467 3 154 3.6E-30 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 NHAM_RS09040 e964b52d0b87a7d491ccc437582272ec 154 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 9 148 3.6E-45 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NHAM_RS09040 e964b52d0b87a7d491ccc437582272ec 154 PANTHER PTHR11071 9 143 1.5E-47 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 NHAM_RS09040 e964b52d0b87a7d491ccc437582272ec 154 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 129 1.8E-9 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NHAM_RS09040 e964b52d0b87a7d491ccc437582272ec 154 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 59 1.8E-9 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NHAM_RS09040 e964b52d0b87a7d491ccc437582272ec 154 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 101 113 1.8E-9 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NHAM_RS09040 e964b52d0b87a7d491ccc437582272ec 154 Gene3D G3DSA:2.40.100.10 4 137 3.4E-46 T 22-04-2016 IPR029000 Cyclophilin-like domain NHAM_RS04745 baddb000a585117a38f0bd28ce7c8a94 318 PANTHER PTHR11935 1 239 1.1E-74 T 22-04-2016 NHAM_RS04745 baddb000a585117a38f0bd28ce7c8a94 318 SUPERFAMILY SSF56281 14 308 3.08E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS04745 baddb000a585117a38f0bd28ce7c8a94 318 PANTHER PTHR11935:SF5 1 239 1.1E-74 T 22-04-2016 NHAM_RS04745 baddb000a585117a38f0bd28ce7c8a94 318 Gene3D G3DSA:3.60.15.10 11 242 8.1E-50 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS04745 baddb000a585117a38f0bd28ce7c8a94 318 Pfam PF00753 Metallo-beta-lactamase superfamily 34 186 1.7E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS04745 baddb000a585117a38f0bd28ce7c8a94 318 SMART SM00849 35 220 5.2E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 SUPERFAMILY SSF51735 3 239 9.57E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 3.0E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 3.0E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 3.0E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 Gene3D G3DSA:3.40.50.720 3 238 1.8E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PANTHER PTHR24322 147 179 6.2E-70 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PANTHER PTHR24322 7 131 6.2E-70 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.0E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.0E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 1.0E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.0E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.0E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PANTHER PTHR24322:SF559 147 179 6.2E-70 T 22-04-2016 NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 PANTHER PTHR24322:SF559 7 131 6.2E-70 T 22-04-2016 NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 239 6.5E-112 T 22-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 1.4E-62 T 22-04-2016 NHAM_RS18925 5e4731569104b4408af7fd9614cf5d7b 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 178 8.6E-4 T 22-04-2016 NHAM_RS12530 fa2179144a4ee1e0ec0892212075d4cb 154 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 142 5.1E-57 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 NHAM_RS12530 fa2179144a4ee1e0ec0892212075d4cb 154 Gene3D G3DSA:3.90.1180.10 3 142 2.8E-59 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 NHAM_RS12530 fa2179144a4ee1e0ec0892212075d4cb 154 Pfam PF00572 Ribosomal protein L13 14 139 5.0E-51 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NHAM_RS12530 fa2179144a4ee1e0ec0892212075d4cb 154 SUPERFAMILY SSF52161 1 140 2.35E-55 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 NHAM_RS12530 fa2179144a4ee1e0ec0892212075d4cb 154 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 144 27.374 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NHAM_RS12530 fa2179144a4ee1e0ec0892212075d4cb 154 PANTHER PTHR11545 1 140 2.3E-68 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NHAM_RS12530 fa2179144a4ee1e0ec0892212075d4cb 154 PIRSF PIRSF002181 1 154 6.3E-49 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NHAM_RS17415 517c9441cb1568269f1dde76e56d6569 540 PANTHER PTHR33908 3 518 2.4E-138 T 22-04-2016 NHAM_RS17415 517c9441cb1568269f1dde76e56d6569 540 PANTHER PTHR33908:SF1 3 518 2.4E-138 T 22-04-2016 NHAM_RS17415 517c9441cb1568269f1dde76e56d6569 540 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 64 225 2.3E-40 T 22-04-2016 NHAM_RS10775 205d48b5045f8cbd173119bf9392511f 216 PANTHER PTHR10520 2 195 1.1E-92 T 22-04-2016 NHAM_RS10775 205d48b5045f8cbd173119bf9392511f 216 Gene3D G3DSA:3.40.50.170 1 193 1.7E-66 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NHAM_RS10775 205d48b5045f8cbd173119bf9392511f 216 Pfam PF00551 Formyl transferase 2 183 3.5E-56 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NHAM_RS10775 205d48b5045f8cbd173119bf9392511f 216 PANTHER PTHR10520:SF10 2 195 1.1E-92 T 22-04-2016 NHAM_RS10775 205d48b5045f8cbd173119bf9392511f 216 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 189 31.153 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 NHAM_RS10775 205d48b5045f8cbd173119bf9392511f 216 SUPERFAMILY SSF53328 2 193 2.62E-58 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NHAM_RS10775 205d48b5045f8cbd173119bf9392511f 216 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 2.1E-66 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 Gene3D G3DSA:2.160.20.10 39 309 3.4E-21 T 22-04-2016 IPR012334 Pectin lyase fold NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 TIGRFAM TIGR03808 RR_plus_rpt_1: twin-arg-translocated uncharacterized repeat protein 1 455 1.3E-267 T 22-04-2016 IPR022388 Conserved hypothetical protein CHP03808 NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 SMART SM00710 380 401 1700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 SMART SM00710 188 210 48.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 SMART SM00710 215 244 2100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 SMART SM00710 247 269 500.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 SMART SM00710 143 165 0.31 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 SMART SM00710 320 355 9400.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 SMART SM00710 270 292 1800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 SMART SM00710 294 315 480.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 Pfam PF12708 Pectate lyase superfamily protein 38 210 4.3E-9 T 22-04-2016 IPR024535 Pectate lyase superfamily protein NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 Pfam PF13229 Right handed beta helix region 215 313 1.5E-6 T 22-04-2016 NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 SUPERFAMILY SSF51126 29 391 5.74E-41 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 TIGRFAM TIGR03807 RR_fam_repeat: putative cofactor-binding repeat 342 368 4.2E-13 T 22-04-2016 IPR022444 Cofactor-binding repeat, putative NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 TIGRFAM TIGR03807 RR_fam_repeat: putative cofactor-binding repeat 312 333 1.5E-9 T 22-04-2016 IPR022444 Cofactor-binding repeat, putative NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 TIGRFAM TIGR03807 RR_fam_repeat: putative cofactor-binding repeat 279 308 6.0E-6 T 22-04-2016 IPR022444 Cofactor-binding repeat, putative NHAM_RS13555 b3a01a06afc1aa969507fdabe65f07e0 455 TIGRFAM TIGR03807 RR_fam_repeat: putative cofactor-binding repeat 369 394 1.0E-10 T 22-04-2016 IPR022444 Cofactor-binding repeat, putative NHAM_RS00640 47c0fcfc2ec127c67753fb4263432595 318 PANTHER PTHR10285:SF7 279 317 7.1E-154 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 NHAM_RS00640 47c0fcfc2ec127c67753fb4263432595 318 PANTHER PTHR10285:SF7 2 263 7.1E-154 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 NHAM_RS00640 47c0fcfc2ec127c67753fb4263432595 318 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 91 244 5.8E-10 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 NHAM_RS00640 47c0fcfc2ec127c67753fb4263432595 318 Hamap MF_00215 Pantothenate kinase [coaA]. 1 318 182.26 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 NHAM_RS00640 47c0fcfc2ec127c67753fb4263432595 318 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 12 317 1.5E-129 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 NHAM_RS00640 47c0fcfc2ec127c67753fb4263432595 318 PANTHER PTHR10285 279 317 7.1E-154 T 22-04-2016 NHAM_RS00640 47c0fcfc2ec127c67753fb4263432595 318 PANTHER PTHR10285 2 263 7.1E-154 T 22-04-2016 NHAM_RS00640 47c0fcfc2ec127c67753fb4263432595 318 Gene3D G3DSA:3.40.50.300 12 316 6.1E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00640 47c0fcfc2ec127c67753fb4263432595 318 SUPERFAMILY SSF52540 9 316 8.88E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00640 47c0fcfc2ec127c67753fb4263432595 318 PIRSF PIRSF000545 2 318 4.4E-142 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 NHAM_RS03345 6d0b40a9bed83f401a1eb517f171e164 259 SUPERFAMILY SSF46785 153 241 3.77E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03345 6d0b40a9bed83f401a1eb517f171e164 259 PANTHER PTHR24567:SF22 12 239 3.4E-60 T 22-04-2016 NHAM_RS03345 6d0b40a9bed83f401a1eb517f171e164 259 Gene3D G3DSA:1.10.10.10 152 224 2.5E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03345 6d0b40a9bed83f401a1eb517f171e164 259 PANTHER PTHR24567 12 239 3.4E-60 T 22-04-2016 NHAM_RS03345 6d0b40a9bed83f401a1eb517f171e164 259 Pfam PF13545 Crp-like helix-turn-helix domain 156 221 8.8E-14 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS03345 6d0b40a9bed83f401a1eb517f171e164 259 SMART SM00419 167 216 4.7E-4 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 282 5.2E-31 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 SUPERFAMILY SSF88659 192 284 1.05E-19 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 Pfam PF00140 Sigma-70 factor, region 1.2 17 46 2.8E-6 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 Gene3D G3DSA:1.10.10.10 225 285 1.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 PRINTS PR00046 Major sigma-70 factor signature 234 246 2.1E-20 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 PRINTS PR00046 Major sigma-70 factor signature 77 90 2.1E-20 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 PRINTS PR00046 Major sigma-70 factor signature 101 109 2.1E-20 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 PRINTS PR00046 Major sigma-70 factor signature 268 279 2.1E-20 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 PRINTS PR00046 Major sigma-70 factor signature 253 268 2.1E-20 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 284 1.3E-113 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 Gene3D G3DSA:1.10.601.10 16 119 3.3E-36 T 22-04-2016 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 PANTHER PTHR30376 2 288 1.8E-110 T 22-04-2016 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 SUPERFAMILY SSF88946 13 121 1.26E-37 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 52.12 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 Pfam PF04545 Sigma-70, region 4 230 280 1.9E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 Pfam PF04542 Sigma-70 region 2 53 121 2.3E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS14665 526e6b79d5e5f617f74cfdee6dd0979c 299 PIRSF PIRSF000770 7 297 3.4E-34 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 Gene3D G3DSA:1.10.287.80 242 287 1.4E-25 T 22-04-2016 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 Pfam PF00231 ATP synthase 3 291 7.8E-85 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 Gene3D G3DSA:3.40.1380.10 75 197 3.7E-32 T 22-04-2016 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 SUPERFAMILY SSF52943 2 292 3.27E-84 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 Gene3D G3DSA:1.10.287.80 207 241 1.0E-30 T 22-04-2016 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 Gene3D G3DSA:1.10.287.80 19 60 1.0E-30 T 22-04-2016 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 PRINTS PR00126 ATP synthase gamma subunit signature 239 258 2.5E-27 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 2.5E-27 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 PRINTS PR00126 ATP synthase gamma subunit signature 270 291 2.5E-27 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 2.5E-27 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 PIRSF PIRSF039089 1 292 2.4E-99 T 22-04-2016 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 PANTHER PTHR11693 1 292 1.7E-117 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 292 32.167 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 278 291 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site NHAM_RS02765 79d8e261af406ed3819ddde0e494a4a4 292 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 292 1.0E-96 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 Pfam PF00684 DnaJ central domain 147 207 1.4E-11 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 Gene3D G3DSA:2.60.260.20 256 335 3.5E-24 T 22-04-2016 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 SUPERFAMILY SSF49493 213 257 1.01E-18 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 SUPERFAMILY SSF49493 119 152 1.01E-18 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 SUPERFAMILY SSF46565 2 105 2.36E-32 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 SMART SM00271 5 63 2.8E-28 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 Gene3D G3DSA:1.10.287.110 2 105 8.5E-33 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 Gene3D G3DSA:2.60.260.20 210 252 5.1E-23 T 22-04-2016 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 Gene3D G3DSA:2.60.260.20 109 140 5.1E-23 T 22-04-2016 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 PANTHER PTHR24078 1 351 1.9E-153 T 22-04-2016 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 Pfam PF01556 DnaJ C terminal domain 121 334 3.5E-42 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 PRINTS PR00625 DnaJ domain signature 8 26 7.3E-27 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 PRINTS PR00625 DnaJ domain signature 63 82 7.3E-27 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 PRINTS PR00625 DnaJ domain signature 26 41 7.3E-27 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 PRINTS PR00625 DnaJ domain signature 43 63 7.3E-27 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 Gene3D G3DSA:2.10.230.10 141 209 1.0E-21 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 Pfam PF00226 DnaJ domain 7 68 1.3E-24 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 SUPERFAMILY SSF57938 134 210 4.97E-20 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 7 350 4.0E-127 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 22-04-2016 IPR018253 DnaJ domain, conserved site NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 SUPERFAMILY SSF49493 258 345 4.71E-24 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 370 39.902 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 NHAM_RS00780 d63403cb84ad62e3d93233f1c68332cf 377 PANTHER PTHR24078:SF231 1 351 1.9E-153 T 22-04-2016 NHAM_RS11040 1bd6235bcec3651a67e3512e4af7a478 219 Pfam PF00578 AhpC/TSA family 5 143 1.2E-26 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NHAM_RS11040 1bd6235bcec3651a67e3512e4af7a478 219 SUPERFAMILY SSF52833 3 216 5.47E-64 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS11040 1bd6235bcec3651a67e3512e4af7a478 219 Gene3D G3DSA:3.30.1020.10 165 219 5.6E-24 T 22-04-2016 NHAM_RS11040 1bd6235bcec3651a67e3512e4af7a478 219 PANTHER PTHR10681:SF99 3 219 1.6E-77 T 22-04-2016 NHAM_RS11040 1bd6235bcec3651a67e3512e4af7a478 219 PIRSF PIRSF000239 1 217 2.3E-72 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 NHAM_RS11040 1bd6235bcec3651a67e3512e4af7a478 219 Gene3D G3DSA:3.40.30.10 4 164 2.2E-56 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS11040 1bd6235bcec3651a67e3512e4af7a478 219 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 165 204 1.1E-11 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NHAM_RS11040 1bd6235bcec3651a67e3512e4af7a478 219 PANTHER PTHR10681 3 219 1.6E-77 T 22-04-2016 NHAM_RS13310 510c69fc8272a0c6964d0a14c3c85ee1 534 SUPERFAMILY SSF53448 340 528 7.43E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS13310 510c69fc8272a0c6964d0a14c3c85ee1 534 Gene3D G3DSA:3.40.980.10 152 303 2.1E-13 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS13310 510c69fc8272a0c6964d0a14c3c85ee1 534 Gene3D G3DSA:3.90.105.10 20 53 3.8E-5 T 22-04-2016 NHAM_RS13310 510c69fc8272a0c6964d0a14c3c85ee1 534 Gene3D G3DSA:3.90.550.10 340 533 5.6E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS13310 510c69fc8272a0c6964d0a14c3c85ee1 534 PIRSF PIRSF036626 1 534 2.0E-247 T 22-04-2016 IPR012184 Bifunctional molybdopterin binding protein /nucleotidyl transferase, putative NHAM_RS13310 510c69fc8272a0c6964d0a14c3c85ee1 534 PANTHER PTHR19136 298 533 1.8E-70 T 22-04-2016 NHAM_RS13310 510c69fc8272a0c6964d0a14c3c85ee1 534 SMART SM00852 169 302 1.4E-8 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS13310 510c69fc8272a0c6964d0a14c3c85ee1 534 SUPERFAMILY SSF53218 168 305 3.53E-18 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS13310 510c69fc8272a0c6964d0a14c3c85ee1 534 Pfam PF12804 MobA-like NTP transferase domain 343 505 5.5E-43 T 22-04-2016 IPR025877 MobA-like NTP transferase NHAM_RS13310 510c69fc8272a0c6964d0a14c3c85ee1 534 PANTHER PTHR19136:SF78 298 533 1.8E-70 T 22-04-2016 NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 Pfam PF01380 SIS domain 54 187 4.1E-28 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 Gene3D G3DSA:3.10.580.10 211 332 2.3E-33 T 22-04-2016 NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 SUPERFAMILY SSF54631 274 332 4.24E-10 T 22-04-2016 NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 SUPERFAMILY SSF53697 39 276 3.78E-56 T 22-04-2016 NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 PANTHER PTHR38418 8 214 2.9E-34 T 22-04-2016 NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 Gene3D G3DSA:3.40.50.10490 26 206 1.8E-43 T 22-04-2016 NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 Pfam PF00571 CBS domain 280 332 1.1E-9 T 22-04-2016 IPR000644 CBS domain NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 Pfam PF00571 CBS domain 217 271 3.7E-6 T 22-04-2016 IPR000644 CBS domain NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 SMART SM00116 224 272 0.89 T 22-04-2016 IPR000644 CBS domain NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 SMART SM00116 287 334 0.021 T 22-04-2016 IPR000644 CBS domain NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 PIRSF PIRSF004692 5 335 1.4E-121 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 60 325 3.1E-90 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 NHAM_RS17515 e29f96da9478a9594c5d619aa864398b 335 PANTHER PTHR38418:SF1 8 214 2.9E-34 T 22-04-2016 NHAM_RS17625 e6ddec0d53b22e05707636b03f767cc9 91 PANTHER PTHR33677 11 91 2.8E-30 T 22-04-2016 NHAM_RS17625 e6ddec0d53b22e05707636b03f767cc9 91 PANTHER PTHR33677:SF3 11 91 2.8E-30 T 22-04-2016 NHAM_RS17625 e6ddec0d53b22e05707636b03f767cc9 91 Pfam PF02583 Metal-sensitive transcriptional repressor 10 88 6.6E-30 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 NHAM_RS02525 f41c88ff604d081ca0c3efc566f574c2 319 PANTHER PTHR30349 15 318 1.5E-94 T 22-04-2016 NHAM_RS02525 f41c88ff604d081ca0c3efc566f574c2 319 Gene3D G3DSA:1.10.150.130 12 102 1.5E-24 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS02525 f41c88ff604d081ca0c3efc566f574c2 319 SUPERFAMILY SSF56349 12 307 3.83E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS02525 f41c88ff604d081ca0c3efc566f574c2 319 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 317 57.671 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 NHAM_RS02525 f41c88ff604d081ca0c3efc566f574c2 319 Gene3D G3DSA:1.10.443.10 116 309 1.7E-47 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS02525 f41c88ff604d081ca0c3efc566f574c2 319 PANTHER PTHR30349:SF5 15 318 1.5E-94 T 22-04-2016 NHAM_RS02525 f41c88ff604d081ca0c3efc566f574c2 319 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 93 1.3E-15 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 NHAM_RS02525 f41c88ff604d081ca0c3efc566f574c2 319 Pfam PF00589 Phage integrase family 138 302 2.4E-40 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS02525 f41c88ff604d081ca0c3efc566f574c2 319 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 317 27.392 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD NHAM_RS02525 f41c88ff604d081ca0c3efc566f574c2 319 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 15 317 7.7E-100 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 Pfam PF02560 Cyanate lyase C-terminal domain 80 146 2.1E-32 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 SMART SM01116 76 148 5.0E-46 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 PIRSF PIRSF001263 1 148 1.0E-41 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 Gene3D G3DSA:1.10.260.40 1 81 1.3E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 SUPERFAMILY SSF47413 1 76 3.09E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 Hamap MF_00535 Cyanate hydratase [cynS]. 1 162 80.908 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 TIGRFAM TIGR00673 cynS: cyanase 4 148 7.5E-42 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 PRINTS PR01693 Cyanase signature 102 118 7.7E-18 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 PRINTS PR01693 Cyanase signature 14 29 7.7E-18 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 PRINTS PR01693 Cyanase signature 133 143 7.7E-18 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 PRINTS PR01693 Cyanase signature 84 98 7.7E-18 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 PANTHER PTHR34186:SF2 3 159 4.0E-70 T 22-04-2016 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 SUPERFAMILY SSF55234 80 148 3.27E-27 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 PANTHER PTHR34186 3 159 4.0E-70 T 22-04-2016 NHAM_RS08335 f07d3f766ef0d709a15bd5b881ea7ff0 162 Gene3D G3DSA:3.30.1160.10 82 147 3.8E-32 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NHAM_RS03605 c8ab504235a4c55dee468f5087660df0 400 PANTHER PTHR11933:SF10 6 398 4.3E-164 T 22-04-2016 NHAM_RS03605 c8ab504235a4c55dee468f5087660df0 400 Gene3D G3DSA:2.40.30.10 288 377 2.1E-18 T 22-04-2016 NHAM_RS03605 c8ab504235a4c55dee468f5087660df0 400 Pfam PF03054 tRNA methyl transferase 15 372 3.9E-110 T 22-04-2016 NHAM_RS03605 c8ab504235a4c55dee468f5087660df0 400 PANTHER PTHR11933 6 398 4.3E-164 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 NHAM_RS03605 c8ab504235a4c55dee468f5087660df0 400 Gene3D G3DSA:3.40.50.620 11 222 8.9E-81 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS03605 c8ab504235a4c55dee468f5087660df0 400 SUPERFAMILY SSF52402 13 257 2.18E-52 T 22-04-2016 NHAM_RS03605 c8ab504235a4c55dee468f5087660df0 400 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 14 373 38.974 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 NHAM_RS03605 c8ab504235a4c55dee468f5087660df0 400 Gene3D G3DSA:2.30.30.280 231 285 3.3E-16 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 NHAM_RS03605 c8ab504235a4c55dee468f5087660df0 400 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 15 372 2.3E-94 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 NHAM_RS05755 7cb59b38300d5e4e09b377fe1165321e 137 PANTHER PTHR10173 13 137 3.3E-63 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 NHAM_RS05755 7cb59b38300d5e4e09b377fe1165321e 137 Pfam PF01641 SelR domain 17 136 8.9E-56 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NHAM_RS05755 7cb59b38300d5e4e09b377fe1165321e 137 Gene3D G3DSA:2.170.150.20 7 137 2.3E-63 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NHAM_RS05755 7cb59b38300d5e4e09b377fe1165321e 137 PANTHER PTHR10173:SF18 13 137 3.3E-63 T 22-04-2016 NHAM_RS05755 7cb59b38300d5e4e09b377fe1165321e 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 14 137 37.503 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NHAM_RS05755 7cb59b38300d5e4e09b377fe1165321e 137 SUPERFAMILY SSF51316 12 136 3.61E-59 T 22-04-2016 IPR011057 Mss4-like NHAM_RS05755 7cb59b38300d5e4e09b377fe1165321e 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 13 136 1.5E-57 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NHAM_RS19755 d6b647f19afe18385033c0c32ad3819e 315 Gene3D G3DSA:3.30.1490.70 164 206 1.9E-18 T 22-04-2016 NHAM_RS19755 d6b647f19afe18385033c0c32ad3819e 315 Gene3D G3DSA:3.30.1490.70 21 49 1.9E-18 T 22-04-2016 NHAM_RS19755 d6b647f19afe18385033c0c32ad3819e 315 PANTHER PTHR10459:SF70 21 309 8.8E-70 T 22-04-2016 NHAM_RS19755 d6b647f19afe18385033c0c32ad3819e 315 Pfam PF04679 ATP dependent DNA ligase C terminal region 224 309 6.8E-15 T 22-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 NHAM_RS19755 d6b647f19afe18385033c0c32ad3819e 315 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 27 313 1.1E-84 T 22-04-2016 IPR014146 DNA ligase D, ligase domain NHAM_RS19755 d6b647f19afe18385033c0c32ad3819e 315 SUPERFAMILY SSF50249 215 309 5.05E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS19755 d6b647f19afe18385033c0c32ad3819e 315 Gene3D G3DSA:3.30.470.30 50 153 9.3E-27 T 22-04-2016 NHAM_RS19755 d6b647f19afe18385033c0c32ad3819e 315 PANTHER PTHR10459 21 309 8.8E-70 T 22-04-2016 NHAM_RS19755 d6b647f19afe18385033c0c32ad3819e 315 SUPERFAMILY SSF56091 13 207 1.11E-48 T 22-04-2016 NHAM_RS19755 d6b647f19afe18385033c0c32ad3819e 315 Pfam PF01068 ATP dependent DNA ligase domain 41 206 1.3E-27 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 NHAM_RS19755 d6b647f19afe18385033c0c32ad3819e 315 Gene3D G3DSA:2.40.50.140 209 310 1.0E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.2E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.2E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.2E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.2E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.2E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 Gene3D G3DSA:2.40.30.10 302 395 3.8E-45 T 22-04-2016 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 PANTHER PTHR23115:SF112 1 395 9.2E-254 T 22-04-2016 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 150 5.8E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.3E-32 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 SUPERFAMILY SSF52540 9 228 1.16E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 Gene3D G3DSA:2.40.30.10 214 300 4.1E-38 T 22-04-2016 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 9.4E-58 T 22-04-2016 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 PANTHER PTHR23115 1 395 9.2E-254 T 22-04-2016 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.395 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 7.2E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 SUPERFAMILY SSF50447 207 303 4.71E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 SUPERFAMILY SSF50465 304 396 4.32E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 Gene3D G3DSA:3.40.50.300 5 213 4.6E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07900 4f2f0b0b2de4d72a21a597c6fb6a2ba7 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.3E-229 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 PANTHER PTHR32089 282 561 1.2E-194 T 22-04-2016 NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 PANTHER PTHR32089:SF40 282 561 1.2E-194 T 22-04-2016 NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 Pfam PF08447 PAS fold 32 114 7.2E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 362 557 4.3E-37 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 SUPERFAMILY SSF55785 20 114 8.9E-24 T 22-04-2016 IPR000014 PAS domain NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 Gene3D G3DSA:3.30.450.20 21 114 4.1E-21 T 22-04-2016 NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 SMART SM00283 304 558 1.1E-46 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 PANTHER PTHR32089 47 252 1.2E-194 T 22-04-2016 NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 SUPERFAMILY SSF58104 240 272 5.36E-64 T 22-04-2016 NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 SUPERFAMILY SSF58104 310 557 5.36E-64 T 22-04-2016 NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 PANTHER PTHR32089:SF40 47 252 1.2E-194 T 22-04-2016 NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 114 4.0E-11 T 22-04-2016 IPR000014 PAS domain NHAM_RS05330 20a7baa2208cc4fb8f1aebe15ec30c6b 564 Gene3D G3DSA:1.10.287.950 320 526 1.9E-48 T 22-04-2016 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 PANTHER PTHR21060 1 391 1.6E-132 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 SUPERFAMILY SSF53067 162 390 1.02E-72 T 22-04-2016 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 Gene3D G3DSA:3.30.420.40 203 390 7.0E-67 T 22-04-2016 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 PANTHER PTHR21060:SF11 1 391 1.6E-132 T 22-04-2016 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 Hamap MF_00020 Acetate kinase [ackA]. 1 391 143.562 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 TIGRFAM TIGR00016 ackA: acetate kinase 4 390 3.2E-102 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 PRINTS PR00471 Acetate kinase family signature 372 384 9.7E-32 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 PRINTS PR00471 Acetate kinase family signature 320 336 9.7E-32 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 PRINTS PR00471 Acetate kinase family signature 204 225 9.7E-32 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 PRINTS PR00471 Acetate kinase family signature 5 16 9.7E-32 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 PRINTS PR00471 Acetate kinase family signature 175 188 9.7E-32 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 PIRSF PIRSF000722 1 391 1.1E-129 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 SUPERFAMILY SSF53067 4 195 2.33E-49 T 22-04-2016 NHAM_RS09675 0e40ce56af1a7500a2d85a67fe8c7b79 391 Pfam PF00871 Acetokinase family 5 385 8.3E-101 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 NHAM_RS06165 526b1bf6dd95eeea218efce76ace3018 342 Pfam PF00005 ABC transporter 20 161 4.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS06165 526b1bf6dd95eeea218efce76ace3018 342 SUPERFAMILY SSF52540 4 242 2.8E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06165 526b1bf6dd95eeea218efce76ace3018 342 PANTHER PTHR24220:SF151 5 314 1.2E-142 T 22-04-2016 NHAM_RS06165 526b1bf6dd95eeea218efce76ace3018 342 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS06165 526b1bf6dd95eeea218efce76ace3018 342 PANTHER PTHR24220 5 314 1.2E-142 T 22-04-2016 NHAM_RS06165 526b1bf6dd95eeea218efce76ace3018 342 Gene3D G3DSA:2.40.50.140 252 307 0.001 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS06165 526b1bf6dd95eeea218efce76ace3018 342 SUPERFAMILY SSF50331 236 337 1.6E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal NHAM_RS06165 526b1bf6dd95eeea218efce76ace3018 342 SMART SM00382 28 211 1.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS06165 526b1bf6dd95eeea218efce76ace3018 342 Gene3D G3DSA:3.40.50.300 2 234 6.0E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19730 98ed5841e016d9191200798b86f54ffb 191 Pfam PF13936 Helix-turn-helix domain 145 183 3.9E-7 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain NHAM_RS19730 98ed5841e016d9191200798b86f54ffb 191 Pfam PF00239 Resolvase, N terminal domain 3 136 1.7E-38 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS19730 98ed5841e016d9191200798b86f54ffb 191 Gene3D G3DSA:3.40.50.1390 2 120 2.0E-36 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS19730 98ed5841e016d9191200798b86f54ffb 191 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 NHAM_RS19730 98ed5841e016d9191200798b86f54ffb 191 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 NHAM_RS19730 98ed5841e016d9191200798b86f54ffb 191 PANTHER PTHR30461 3 190 5.8E-37 T 22-04-2016 NHAM_RS19730 98ed5841e016d9191200798b86f54ffb 191 SMART SM00857 2 137 1.4E-48 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS19730 98ed5841e016d9191200798b86f54ffb 191 PANTHER PTHR30461:SF9 3 190 5.8E-37 T 22-04-2016 NHAM_RS19730 98ed5841e016d9191200798b86f54ffb 191 SUPERFAMILY SSF53041 2 136 9.55E-36 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS02230 480c2c63c475107d8bf55d674aa495fe 327 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 52 319 3.7E-19 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NHAM_RS02230 480c2c63c475107d8bf55d674aa495fe 327 Gene3D G3DSA:3.40.50.720 13 120 6.1E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS02230 480c2c63c475107d8bf55d674aa495fe 327 SUPERFAMILY SSF51735 107 289 8.51E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS02230 480c2c63c475107d8bf55d674aa495fe 327 Gene3D G3DSA:3.40.50.720 121 290 2.3E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS02230 480c2c63c475107d8bf55d674aa495fe 327 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 115 288 5.4E-43 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NHAM_RS02230 480c2c63c475107d8bf55d674aa495fe 327 PANTHER PTHR10996 1 319 5.4E-120 T 22-04-2016 NHAM_RS02230 480c2c63c475107d8bf55d674aa495fe 327 PANTHER PTHR10996:SF152 1 319 5.4E-120 T 22-04-2016 NHAM_RS02230 480c2c63c475107d8bf55d674aa495fe 327 SUPERFAMILY SSF52283 10 141 4.73E-24 T 22-04-2016 NHAM_RS12550 80267d058faf6baed7a0f013f91a7f6f 409 Gene3D G3DSA:1.20.1250.20 9 185 2.1E-24 T 22-04-2016 NHAM_RS12550 80267d058faf6baed7a0f013f91a7f6f 409 Pfam PF07690 Major Facilitator Superfamily 16 363 2.8E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS12550 80267d058faf6baed7a0f013f91a7f6f 409 Gene3D G3DSA:1.20.1250.20 202 391 4.9E-25 T 22-04-2016 NHAM_RS12550 80267d058faf6baed7a0f013f91a7f6f 409 SUPERFAMILY SSF103473 8 397 9.29E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS12550 80267d058faf6baed7a0f013f91a7f6f 409 PANTHER PTHR23515 10 393 1.6E-65 T 22-04-2016 NHAM_RS17995 30593749ad2612cf119e02ea626956e0 638 SUPERFAMILY SSF140990 406 602 8.63E-72 T 22-04-2016 NHAM_RS17995 30593749ad2612cf119e02ea626956e0 638 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 2.1E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS17995 30593749ad2612cf119e02ea626956e0 638 PANTHER PTHR23076 1 636 0.0 T 22-04-2016 NHAM_RS17995 30593749ad2612cf119e02ea626956e0 638 SMART SM00382 188 327 3.5E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS17995 30593749ad2612cf119e02ea626956e0 638 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 NHAM_RS17995 30593749ad2612cf119e02ea626956e0 638 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 597 8.7E-237 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 NHAM_RS17995 30593749ad2612cf119e02ea626956e0 638 Pfam PF01434 Peptidase family M41 386 595 2.3E-79 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 NHAM_RS17995 30593749ad2612cf119e02ea626956e0 638 Pfam PF06480 FtsH Extracellular 10 93 5.2E-13 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 NHAM_RS17995 30593749ad2612cf119e02ea626956e0 638 Gene3D G3DSA:1.10.8.60 335 400 1.1E-29 T 22-04-2016 NHAM_RS17995 30593749ad2612cf119e02ea626956e0 638 Gene3D G3DSA:3.40.50.300 152 334 1.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17995 30593749ad2612cf119e02ea626956e0 638 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 604 37.598 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 NHAM_RS17995 30593749ad2612cf119e02ea626956e0 638 SUPERFAMILY SSF52540 146 396 4.43E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10475 ea361a24a71159dc4381fc7aa7d6661d 608 Gene3D G3DSA:3.40.50.10490 244 440 5.6E-57 T 22-04-2016 NHAM_RS10475 ea361a24a71159dc4381fc7aa7d6661d 608 SUPERFAMILY SSF56235 2 232 1.29E-73 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NHAM_RS10475 ea361a24a71159dc4381fc7aa7d6661d 608 Gene3D G3DSA:3.60.20.10 2 235 9.6E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NHAM_RS10475 ea361a24a71159dc4381fc7aa7d6661d 608 Pfam PF13522 Glutamine amidotransferase domain 64 191 7.7E-23 T 22-04-2016 NHAM_RS10475 ea361a24a71159dc4381fc7aa7d6661d 608 SUPERFAMILY SSF53697 244 608 2.06E-109 T 22-04-2016 NHAM_RS10475 ea361a24a71159dc4381fc7aa7d6661d 608 PANTHER PTHR10937 1 608 0.0 T 22-04-2016 NHAM_RS10475 ea361a24a71159dc4381fc7aa7d6661d 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 1.6E-238 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 NHAM_RS10475 ea361a24a71159dc4381fc7aa7d6661d 608 Pfam PF01380 SIS domain 288 416 3.9E-29 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 NHAM_RS10475 ea361a24a71159dc4381fc7aa7d6661d 608 Pfam PF01380 SIS domain 460 591 1.4E-28 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 NHAM_RS10475 ea361a24a71159dc4381fc7aa7d6661d 608 Gene3D G3DSA:3.40.50.10490 441 608 1.5E-64 T 22-04-2016 NHAM_RS10475 ea361a24a71159dc4381fc7aa7d6661d 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 39.197 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 NHAM_RS10475 ea361a24a71159dc4381fc7aa7d6661d 608 PANTHER PTHR10937:SF0 1 608 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 7.8E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.8E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.8E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 7.8E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.8E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 7.8E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 SUPERFAMILY SSF51735 5 261 2.06E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.1E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.1E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 2.1E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PANTHER PTHR24322:SF330 157 189 4.2E-52 T 22-04-2016 NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PANTHER PTHR24322:SF330 11 141 4.2E-52 T 22-04-2016 NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PANTHER PTHR24322 157 189 4.2E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 PANTHER PTHR24322 11 141 4.2E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 Gene3D G3DSA:3.40.50.720 2 261 1.7E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 260 1.4E-57 T 22-04-2016 NHAM_RS18235 aad1f7af38d53b856d6b5f75039b5e41 262 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 7 262 7.1E-114 T 22-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 NHAM_RS09910 2d8d523be000755b1448e4f3603b6f6c 111 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 33 107 4.6E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS09910 2d8d523be000755b1448e4f3603b6f6c 111 SUPERFAMILY SSF46626 10 111 1.07E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS09910 2d8d523be000755b1448e4f3603b6f6c 111 Gene3D G3DSA:1.10.760.10 36 111 2.8E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS07700 325613e0d68869d20567405559aa4bac 93 Gene3D G3DSA:1.10.1200.10 2 91 8.8E-22 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain NHAM_RS07700 325613e0d68869d20567405559aa4bac 93 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site NHAM_RS07700 325613e0d68869d20567405559aa4bac 93 Pfam PF00550 Phosphopantetheine attachment site 6 58 4.0E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain NHAM_RS07700 325613e0d68869d20567405559aa4bac 93 SUPERFAMILY SSF47336 2 60 1.57E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain NHAM_RS16595 a35b9f2410e7aa4187267728821dd23b 207 PANTHER PTHR30289 23 207 1.2E-67 T 22-04-2016 NHAM_RS16595 a35b9f2410e7aa4187267728821dd23b 207 Gene3D G3DSA:3.90.280.10 45 207 7.2E-53 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein NHAM_RS16595 a35b9f2410e7aa4187267728821dd23b 207 SUPERFAMILY SSF49777 45 206 3.53E-51 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein NHAM_RS16595 a35b9f2410e7aa4187267728821dd23b 207 Pfam PF01161 Phosphatidylethanolamine-binding protein 68 205 8.9E-37 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein NHAM_RS16595 a35b9f2410e7aa4187267728821dd23b 207 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 68 205 7.5E-44 T 22-04-2016 IPR005247 YbhB/YbcL NHAM_RS16595 a35b9f2410e7aa4187267728821dd23b 207 PANTHER PTHR30289:SF0 23 207 1.2E-67 T 22-04-2016 NHAM_RS00755 170703d4c2f54abe447143810b9b5434 237 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site NHAM_RS00755 170703d4c2f54abe447143810b9b5434 237 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 5.5E-24 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 NHAM_RS00755 170703d4c2f54abe447143810b9b5434 237 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.5E-112 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 NHAM_RS00755 170703d4c2f54abe447143810b9b5434 237 SUPERFAMILY SSF55666 156 235 3.8E-24 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 NHAM_RS00755 170703d4c2f54abe447143810b9b5434 237 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 4.0E-11 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 NHAM_RS00755 170703d4c2f54abe447143810b9b5434 237 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 47.11 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 NHAM_RS00755 170703d4c2f54abe447143810b9b5434 237 PANTHER PTHR11953:SF0 1 236 3.7E-81 T 22-04-2016 NHAM_RS00755 170703d4c2f54abe447143810b9b5434 237 Gene3D G3DSA:3.30.230.70 9 236 2.5E-30 T 22-04-2016 IPR027408 PNPase/RNase PH domain NHAM_RS00755 170703d4c2f54abe447143810b9b5434 237 PANTHER PTHR11953 1 236 3.7E-81 T 22-04-2016 NHAM_RS00755 170703d4c2f54abe447143810b9b5434 237 SUPERFAMILY SSF54211 1 181 4.15E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS04820 26eda702b928e4aa4b6e2ce8d8c087e9 260 Gene3D G3DSA:1.10.12.10 202 260 1.3E-20 T 22-04-2016 IPR014748 Crontonase, C-terminal NHAM_RS04820 26eda702b928e4aa4b6e2ce8d8c087e9 260 PANTHER PTHR11941:SF76 3 257 5.1E-99 T 22-04-2016 NHAM_RS04820 26eda702b928e4aa4b6e2ce8d8c087e9 260 SUPERFAMILY SSF52096 5 259 3.15E-79 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS04820 26eda702b928e4aa4b6e2ce8d8c087e9 260 Gene3D G3DSA:3.90.226.10 8 200 3.4E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS04820 26eda702b928e4aa4b6e2ce8d8c087e9 260 PANTHER PTHR11941 3 257 5.1E-99 T 22-04-2016 NHAM_RS04820 26eda702b928e4aa4b6e2ce8d8c087e9 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 259 3.3E-60 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NHAM_RS04820 26eda702b928e4aa4b6e2ce8d8c087e9 260 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 3 260 2.2E-123 T 22-04-2016 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18|UniPathway: UPA00930 NHAM_RS09340 061cfacb883f94e291cd40a0be40e66f 322 PANTHER PTHR11075:SF6 1 317 2.0E-155 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 NHAM_RS09340 061cfacb883f94e291cd40a0be40e66f 322 Pfam PF00472 RF-1 domain 173 282 1.3E-38 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NHAM_RS09340 061cfacb883f94e291cd40a0be40e66f 322 SMART SM00937 29 139 4.5E-54 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 NHAM_RS09340 061cfacb883f94e291cd40a0be40e66f 322 SUPERFAMILY SSF75620 2 308 1.7E-119 T 22-04-2016 NHAM_RS09340 061cfacb883f94e291cd40a0be40e66f 322 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 309 1.1E-137 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 NHAM_RS09340 061cfacb883f94e291cd40a0be40e66f 322 Gene3D G3DSA:1.20.58.410 1 60 4.9E-7 T 22-04-2016 NHAM_RS09340 061cfacb883f94e291cd40a0be40e66f 322 PANTHER PTHR11075 1 317 2.0E-155 T 22-04-2016 NHAM_RS09340 061cfacb883f94e291cd40a0be40e66f 322 Pfam PF03462 PCRF domain 2 164 9.0E-50 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 NHAM_RS09340 061cfacb883f94e291cd40a0be40e66f 322 Gene3D G3DSA:3.30.160.20 172 250 9.4E-35 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain NHAM_RS09340 061cfacb883f94e291cd40a0be40e66f 322 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 189 205 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NHAM_RS10125 31b3ccd70cee8ae0efe382cfaff899f7 1116 Pfam PF00271 Helicase conserved C-terminal domain 415 485 1.0E-5 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS10125 31b3ccd70cee8ae0efe382cfaff899f7 1116 Pfam PF04851 Type III restriction enzyme, res subunit 158 326 1.2E-16 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 NHAM_RS10125 31b3ccd70cee8ae0efe382cfaff899f7 1116 SUPERFAMILY SSF52540 355 494 3.1E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10125 31b3ccd70cee8ae0efe382cfaff899f7 1116 SUPERFAMILY SSF52540 181 328 3.1E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10125 31b3ccd70cee8ae0efe382cfaff899f7 1116 Gene3D G3DSA:3.40.50.300 150 331 5.3E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10125 31b3ccd70cee8ae0efe382cfaff899f7 1116 Gene3D G3DSA:3.40.50.300 376 514 4.4E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10125 31b3ccd70cee8ae0efe382cfaff899f7 1116 SMART SM00487 154 358 3.2E-7 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS10125 31b3ccd70cee8ae0efe382cfaff899f7 1116 SMART SM00490 382 486 0.0055 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS13655 3149f6cc6835289b1e50425ece8127a3 415 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 309 2.5E-66 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS13655 3149f6cc6835289b1e50425ece8127a3 415 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 29 402 2.3E-119 T 22-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 NHAM_RS13655 3149f6cc6835289b1e50425ece8127a3 415 PANTHER PTHR10314 1 361 2.3E-133 T 22-04-2016 NHAM_RS13655 3149f6cc6835289b1e50425ece8127a3 415 SUPERFAMILY SSF53686 13 317 2.1E-82 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS13655 3149f6cc6835289b1e50425ece8127a3 415 Gene3D G3DSA:3.30.70.260 330 398 1.8E-7 T 22-04-2016 NHAM_RS13655 3149f6cc6835289b1e50425ece8127a3 415 SUPERFAMILY SSF55021 334 394 1.26E-5 T 22-04-2016 NHAM_RS13655 3149f6cc6835289b1e50425ece8127a3 415 Gene3D G3DSA:3.40.50.1100 77 328 1.4E-64 T 22-04-2016 NHAM_RS13655 3149f6cc6835289b1e50425ece8127a3 415 PANTHER PTHR10314:SF17 1 361 2.3E-133 T 22-04-2016 NHAM_RS12085 167c47cd2cbea42805eaf18274937d29 730 Pfam PF00534 Glycosyl transferases group 1 151 300 2.3E-11 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 NHAM_RS12085 167c47cd2cbea42805eaf18274937d29 730 PANTHER PTHR12526:SF399 72 372 3.2E-22 T 22-04-2016 NHAM_RS12085 167c47cd2cbea42805eaf18274937d29 730 SUPERFAMILY SSF53756 68 324 7.46E-35 T 22-04-2016 NHAM_RS12085 167c47cd2cbea42805eaf18274937d29 730 Gene3D G3DSA:3.40.50.2000 156 294 4.0E-8 T 22-04-2016 NHAM_RS12085 167c47cd2cbea42805eaf18274937d29 730 PANTHER PTHR12526 72 372 3.2E-22 T 22-04-2016 NHAM_RS12085 167c47cd2cbea42805eaf18274937d29 730 SUPERFAMILY SSF53756 431 645 4.02E-11 T 22-04-2016 NHAM_RS00735 6abf36282ba042daf0a5202ad0e38fc8 314 SUPERFAMILY SSF53790 34 251 1.7E-74 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 NHAM_RS00735 6abf36282ba042daf0a5202ad0e38fc8 314 PANTHER PTHR21091 31 251 2.5E-76 T 22-04-2016 NHAM_RS00735 6abf36282ba042daf0a5202ad0e38fc8 314 Gene3D G3DSA:3.40.1010.10 36 142 1.4E-10 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 NHAM_RS00735 6abf36282ba042daf0a5202ad0e38fc8 314 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 36 234 1.1E-28 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 NHAM_RS00735 6abf36282ba042daf0a5202ad0e38fc8 314 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 35 253 34.833 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS00735 6abf36282ba042daf0a5202ad0e38fc8 314 Gene3D G3DSA:3.30.950.10 143 253 9.2E-38 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 NHAM_RS00735 6abf36282ba042daf0a5202ad0e38fc8 314 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 113 124 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS00735 6abf36282ba042daf0a5202ad0e38fc8 314 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 36 299 4.0E-69 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS00735 6abf36282ba042daf0a5202ad0e38fc8 314 PIRSF PIRSF005917 26 307 1.7E-91 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS00735 6abf36282ba042daf0a5202ad0e38fc8 314 PANTHER PTHR21091:SF18 31 251 2.5E-76 T 22-04-2016 NHAM_RS09950 e15e7fb0ba118c2cdcf47c8c32ffaf6d 231 SMART SM00419 173 222 3.6E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS09950 e15e7fb0ba118c2cdcf47c8c32ffaf6d 231 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 195 210 1.3E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS09950 e15e7fb0ba118c2cdcf47c8c32ffaf6d 231 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 179 195 1.3E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS09950 e15e7fb0ba118c2cdcf47c8c32ffaf6d 231 SUPERFAMILY SSF51206 26 153 2.09E-25 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like NHAM_RS09950 e15e7fb0ba118c2cdcf47c8c32ffaf6d 231 Gene3D G3DSA:2.60.120.10 26 148 2.6E-18 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS09950 e15e7fb0ba118c2cdcf47c8c32ffaf6d 231 SMART SM00100 19 163 2.3E-11 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS09950 e15e7fb0ba118c2cdcf47c8c32ffaf6d 231 PANTHER PTHR24567 36 229 1.0E-77 T 22-04-2016 NHAM_RS09950 e15e7fb0ba118c2cdcf47c8c32ffaf6d 231 Gene3D G3DSA:1.10.10.10 156 229 4.9E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS09950 e15e7fb0ba118c2cdcf47c8c32ffaf6d 231 PANTHER PTHR24567:SF28 36 229 1.0E-77 T 22-04-2016 NHAM_RS09950 e15e7fb0ba118c2cdcf47c8c32ffaf6d 231 SUPERFAMILY SSF46785 156 227 1.79E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS09950 e15e7fb0ba118c2cdcf47c8c32ffaf6d 231 Pfam PF13545 Crp-like helix-turn-helix domain 158 227 5.3E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS09950 e15e7fb0ba118c2cdcf47c8c32ffaf6d 231 Pfam PF00027 Cyclic nucleotide-binding domain 43 125 1.3E-13 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS22430 f849a01cd35033768945de53473fc59f 111 Pfam PF13673 Acetyltransferase (GNAT) domain 15 105 3.3E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS22430 f849a01cd35033768945de53473fc59f 111 SUPERFAMILY SSF55729 8 105 9.99E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS22430 f849a01cd35033768945de53473fc59f 111 PANTHER PTHR23091 1 104 2.9E-22 T 22-04-2016 NHAM_RS22430 f849a01cd35033768945de53473fc59f 111 PANTHER PTHR23091:SF240 1 104 2.9E-22 T 22-04-2016 NHAM_RS22430 f849a01cd35033768945de53473fc59f 111 Gene3D G3DSA:3.40.630.30 11 104 6.6E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS12580 84e1f9e451a02d1123478a398bde27ed 377 PANTHER PTHR12526:SF387 5 377 2.2E-80 T 22-04-2016 NHAM_RS12580 84e1f9e451a02d1123478a398bde27ed 377 Gene3D G3DSA:3.40.50.2000 198 350 1.1E-23 T 22-04-2016 NHAM_RS12580 84e1f9e451a02d1123478a398bde27ed 377 Pfam PF00534 Glycosyl transferases group 1 192 340 2.2E-26 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 NHAM_RS12580 84e1f9e451a02d1123478a398bde27ed 377 Pfam PF13579 Glycosyl transferase 4-like domain 20 185 3.7E-22 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NHAM_RS12580 84e1f9e451a02d1123478a398bde27ed 377 PANTHER PTHR12526 5 377 2.2E-80 T 22-04-2016 NHAM_RS12580 84e1f9e451a02d1123478a398bde27ed 377 SUPERFAMILY SSF53756 16 373 2.42E-69 T 22-04-2016 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 SUPERFAMILY SSF55874 663 828 1.83E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 Gene3D G3DSA:3.30.565.10 675 833 6.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 Gene3D G3DSA:1.10.287.130 599 669 2.6E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 Pfam PF00512 His Kinase A (phospho-acceptor) domain 607 674 1.7E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 720 829 7.4E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 SMART SM00388 606 674 1.9E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 PANTHER PTHR24423 46 348 8.3E-113 T 22-04-2016 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 PANTHER PTHR24423 471 829 8.3E-113 T 22-04-2016 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 SUPERFAMILY SSF55785 457 574 4.01E-10 T 22-04-2016 IPR000014 PAS domain NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 Pfam PF12860 PAS fold 351 463 4.9E-14 T 22-04-2016 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 Pfam PF12860 PAS fold 479 590 1.3E-11 T 22-04-2016 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 SUPERFAMILY SSF55785 329 396 6.81E-6 T 22-04-2016 IPR000014 PAS domain NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 PRINTS PR00344 Bacterial sensor protein C-terminal signature 757 771 2.1E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 PRINTS PR00344 Bacterial sensor protein C-terminal signature 790 808 2.1E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 SMART SM00091 345 415 5.5 T 22-04-2016 IPR000014 PAS domain NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 SMART SM00091 230 296 2.2 T 22-04-2016 IPR000014 PAS domain NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 SMART SM00091 473 540 2.5 T 22-04-2016 IPR000014 PAS domain NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 Gene3D G3DSA:3.30.450.20 476 584 2.6E-10 T 22-04-2016 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 SMART SM00387 720 830 3.7E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 SUPERFAMILY SSF47384 590 674 5.49E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 Gene3D G3DSA:3.30.450.20 338 460 1.1E-8 T 22-04-2016 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 PANTHER PTHR24423:SF486 46 348 8.3E-113 T 22-04-2016 NHAM_RS00260 c145177d70dc9809c2a60f3624cd038f 838 PANTHER PTHR24423:SF486 471 829 8.3E-113 T 22-04-2016 NHAM_RS05815 73a0c7a5b57e4c2cb7ce23f6c9787d47 153 SUPERFAMILY SSF49764 31 138 1.6E-20 T 22-04-2016 IPR008978 HSP20-like chaperone NHAM_RS05815 73a0c7a5b57e4c2cb7ce23f6c9787d47 153 Pfam PF00011 Hsp20/alpha crystallin family 42 138 5.2E-18 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain NHAM_RS05815 73a0c7a5b57e4c2cb7ce23f6c9787d47 153 Gene3D G3DSA:2.60.40.790 3 139 1.3E-17 T 22-04-2016 IPR008978 HSP20-like chaperone NHAM_RS05815 73a0c7a5b57e4c2cb7ce23f6c9787d47 153 PANTHER PTHR11527:SF145 1 146 9.4E-56 T 22-04-2016 NHAM_RS05815 73a0c7a5b57e4c2cb7ce23f6c9787d47 153 PANTHER PTHR11527 1 146 9.4E-56 T 22-04-2016 IPR031107 Small heat shock protein HSP20 NHAM_RS10585 dca754082f1fc2e5effa5b9a4e6a8f8e 163 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 36.052 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NHAM_RS10585 dca754082f1fc2e5effa5b9a4e6a8f8e 163 Gene3D G3DSA:2.40.50.140 2 163 1.1E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10585 dca754082f1fc2e5effa5b9a4e6a8f8e 163 SUPERFAMILY SSF50249 4 163 8.57E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10585 dca754082f1fc2e5effa5b9a4e6a8f8e 163 PANTHER PTHR10302 1 163 1.2E-48 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NHAM_RS10585 dca754082f1fc2e5effa5b9a4e6a8f8e 163 Pfam PF00436 Single-strand binding protein family 5 108 9.9E-40 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 NHAM_RS10585 dca754082f1fc2e5effa5b9a4e6a8f8e 163 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 163 4.5E-47 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 NHAM_RS16650 75397babe715bff51612b3e3ae61b80b 201 Gene3D G3DSA:3.10.540.10 16 96 2.2E-36 T 22-04-2016 NHAM_RS16650 75397babe715bff51612b3e3ae61b80b 201 PIRSF PIRSF029557 1 200 1.4E-84 T 22-04-2016 IPR010707 Protein of unknown function DUF1285 NHAM_RS16650 75397babe715bff51612b3e3ae61b80b 201 Pfam PF06938 Protein of unknown function (DUF1285) 46 189 1.6E-54 T 22-04-2016 IPR010707 Protein of unknown function DUF1285 NHAM_RS16650 75397babe715bff51612b3e3ae61b80b 201 Gene3D G3DSA:2.30.270.10 97 165 7.2E-26 T 22-04-2016 IPR023361 Protein of unknown function DUF1285, beta-roll domain NHAM_RS16635 06f8c40578ae148521e6a3d181d3e0a1 418 PANTHER PTHR13734 18 238 1.1E-56 T 22-04-2016 NHAM_RS16635 06f8c40578ae148521e6a3d181d3e0a1 418 Gene3D G3DSA:1.10.3090.10 152 376 3.6E-33 T 22-04-2016 NHAM_RS16635 06f8c40578ae148521e6a3d181d3e0a1 418 SUPERFAMILY SSF81301 7 151 4.14E-37 T 22-04-2016 NHAM_RS16635 06f8c40578ae148521e6a3d181d3e0a1 418 Gene3D G3DSA:3.30.460.10 18 150 9.0E-37 T 22-04-2016 NHAM_RS16635 06f8c40578ae148521e6a3d181d3e0a1 418 SUPERFAMILY SSF81891 152 405 2.49E-41 T 22-04-2016 NHAM_RS16635 06f8c40578ae148521e6a3d181d3e0a1 418 Pfam PF01743 Poly A polymerase head domain 32 154 3.8E-24 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 NHAM_RS16635 06f8c40578ae148521e6a3d181d3e0a1 418 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 200 238 2.8E-5 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain NHAM_RS10555 28d0e7988044a9571cdc4fadbfb493dc 107 SMART SM01259 26 97 2.7E-46 T 22-04-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 NHAM_RS10555 28d0e7988044a9571cdc4fadbfb493dc 107 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 26 96 3.7E-32 T 22-04-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 NHAM_RS10555 28d0e7988044a9571cdc4fadbfb493dc 107 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 19 98 7.0E-31 T 22-04-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 NHAM_RS10555 28d0e7988044a9571cdc4fadbfb493dc 107 PIRSF PIRSF028440 1 107 2.6E-47 T 22-04-2016 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 PANTHER PTHR30034 64 397 3.4E-126 T 22-04-2016 NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 66 377 3.6E-92 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 SUPERFAMILY SSF101801 304 382 6.93E-14 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 SUPERFAMILY SSF103039 101 286 1.49E-10 T 22-04-2016 IPR028976 CheC-like domain NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 PIRSF PIRSF002888 4 388 1.7E-111 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 PRINTS PR00955 Flagellar motor switch protein FliM signature 65 78 8.5E-23 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 PRINTS PR00955 Flagellar motor switch protein FliM signature 144 160 8.5E-23 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 PRINTS PR00955 Flagellar motor switch protein FliM signature 268 286 8.5E-23 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 PRINTS PR00955 Flagellar motor switch protein FliM signature 169 188 8.5E-23 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 PANTHER PTHR30034:SF0 64 397 3.4E-126 T 22-04-2016 NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 Gene3D G3DSA:2.30.330.10 302 380 4.7E-11 T 22-04-2016 NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 Pfam PF02154 Flagellar motor switch protein FliM 95 286 8.0E-64 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NHAM_RS07075 3d3dc68308fcc5b34b81a4f506b9c090 401 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 308 377 2.6E-18 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) NHAM_RS10685 15f2c853cc1a8f722afbe5500dafb00b 180 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 5 170 5.5E-79 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 NHAM_RS10685 15f2c853cc1a8f722afbe5500dafb00b 180 Pfam PF07977 FabA-like domain 29 160 1.1E-46 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NHAM_RS10685 15f2c853cc1a8f722afbe5500dafb00b 180 Gene3D G3DSA:3.10.129.10 5 169 2.9E-53 T 22-04-2016 IPR029069 HotDog domain NHAM_RS10685 15f2c853cc1a8f722afbe5500dafb00b 180 SUPERFAMILY SSF54637 7 170 5.5E-51 T 22-04-2016 IPR029069 HotDog domain NHAM_RS16510 76a9b2e53be28a62ff6f44f4445625cc 387 SUPERFAMILY SSF102114 79 302 2.88E-14 T 22-04-2016 NHAM_RS16510 76a9b2e53be28a62ff6f44f4445625cc 387 SMART SM00729 96 321 6.7E-10 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NHAM_RS16510 76a9b2e53be28a62ff6f44f4445625cc 387 Gene3D G3DSA:3.20.20.70 99 287 1.7E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS16510 76a9b2e53be28a62ff6f44f4445625cc 387 PANTHER PTHR11228 43 357 4.2E-101 T 22-04-2016 NHAM_RS16510 76a9b2e53be28a62ff6f44f4445625cc 387 Pfam PF04055 Radical SAM superfamily 100 278 8.9E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NHAM_RS16510 76a9b2e53be28a62ff6f44f4445625cc 387 PANTHER PTHR11228:SF26 43 357 4.2E-101 T 22-04-2016 NHAM_RS10710 8da7e52166802a67edc2f1bcead4a0b3 503 Pfam PF03734 L,D-transpeptidase catalytic domain 109 216 3.2E-18 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NHAM_RS10710 8da7e52166802a67edc2f1bcead4a0b3 503 PANTHER PTHR30582 94 245 2.8E-49 T 22-04-2016 NHAM_RS10710 8da7e52166802a67edc2f1bcead4a0b3 503 SUPERFAMILY SSF141523 105 216 1.83E-28 T 22-04-2016 NHAM_RS10710 8da7e52166802a67edc2f1bcead4a0b3 503 Gene3D G3DSA:2.40.440.10 104 217 9.9E-20 T 22-04-2016 NHAM_RS10710 8da7e52166802a67edc2f1bcead4a0b3 503 PIRSF PIRSF029342 35 502 1.2E-93 T 22-04-2016 IPR016915 Uncharacterised conserved protein UCP029342 NHAM_RS10710 8da7e52166802a67edc2f1bcead4a0b3 503 PANTHER PTHR30582:SF2 94 245 2.8E-49 T 22-04-2016 NHAM_RS09635 e33f0efcbb06f793d7a7fb18770d1d25 458 PANTHER PTHR24423:SF496 183 439 2.1E-36 T 22-04-2016 NHAM_RS09635 e33f0efcbb06f793d7a7fb18770d1d25 458 PANTHER PTHR24423:SF496 1 6 2.1E-36 T 22-04-2016 NHAM_RS09635 e33f0efcbb06f793d7a7fb18770d1d25 458 SUPERFAMILY SSF55874 310 444 4.32E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09635 e33f0efcbb06f793d7a7fb18770d1d25 458 SMART SM00387 347 450 2.9E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09635 e33f0efcbb06f793d7a7fb18770d1d25 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 439 2.0E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09635 e33f0efcbb06f793d7a7fb18770d1d25 458 PANTHER PTHR24423 183 439 2.1E-36 T 22-04-2016 NHAM_RS09635 e33f0efcbb06f793d7a7fb18770d1d25 458 PANTHER PTHR24423 1 6 2.1E-36 T 22-04-2016 NHAM_RS09635 e33f0efcbb06f793d7a7fb18770d1d25 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 1.8E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS09635 e33f0efcbb06f793d7a7fb18770d1d25 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 1.8E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS09635 e33f0efcbb06f793d7a7fb18770d1d25 458 Gene3D G3DSA:3.30.565.10 312 447 9.4E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS24195 cdec6e377badafe939ec26adddea43ea 218 Pfam PF06823 Protein of unknown function (DUF1236) 153 214 1.9E-8 T 22-04-2016 IPR009642 Protein of unknown function DUF1236 NHAM_RS21095 49e616775fa55a671bc52320b9174aa7 75 PANTHER PTHR22855 1 65 2.8E-15 T 22-04-2016 NHAM_RS21095 49e616775fa55a671bc52320b9174aa7 75 SUPERFAMILY SSF52096 11 74 5.47E-9 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS21095 49e616775fa55a671bc52320b9174aa7 75 PANTHER PTHR22855:SF17 1 65 2.8E-15 T 22-04-2016 NHAM_RS21095 49e616775fa55a671bc52320b9174aa7 75 Gene3D G3DSA:3.90.226.10 7 64 5.9E-7 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS20450 82347a314acc335a73b7a431ca38eec7 167 PANTHER PTHR30007 15 146 3.4E-38 T 22-04-2016 NHAM_RS20450 82347a314acc335a73b7a431ca38eec7 167 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 94 2.0E-23 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS20450 82347a314acc335a73b7a431ca38eec7 167 PANTHER PTHR30007:SF0 15 146 3.4E-38 T 22-04-2016 NHAM_RS09140 3a9a8cd9354aceaf70806ba23a774279 221 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 21 192 2.6E-25 T 22-04-2016 NHAM_RS09140 3a9a8cd9354aceaf70806ba23a774279 221 SUPERFAMILY SSF53335 1 184 1.03E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS09140 3a9a8cd9354aceaf70806ba23a774279 221 PANTHER PTHR11579 1 176 4.3E-19 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NHAM_RS09140 3a9a8cd9354aceaf70806ba23a774279 221 PANTHER PTHR11579:SF0 1 176 4.3E-19 T 22-04-2016 NHAM_RS09140 3a9a8cd9354aceaf70806ba23a774279 221 Gene3D G3DSA:3.40.50.150 11 216 4.6E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 Pfam PF00072 Response regulator receiver domain 7 116 4.5E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 SMART SM00421 140 197 1.8E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 SMART SM00448 5 116 3.9E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.2E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.2E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.2E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 PANTHER PTHR26402:SF613 5 205 3.9E-94 T 22-04-2016 NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 Gene3D G3DSA:1.10.10.10 149 203 3.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 SUPERFAMILY SSF46894 133 203 1.43E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 5.6E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 SUPERFAMILY SSF52172 4 139 6.4E-35 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 PANTHER PTHR26402 5 205 3.9E-94 T 22-04-2016 NHAM_RS09730 67b8d841e5d6e6dc4b651797a81382d9 205 Gene3D G3DSA:3.40.50.2300 5 148 1.1E-35 T 22-04-2016 NHAM_RS18295 762d5bbe4da4e42bf3a82a3ad12ee724 123 Pfam PF05957 Bacterial protein of unknown function (DUF883) 33 119 9.5E-15 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB NHAM_RS18550 1cb3b56163d48f6f957fa36bc89ece72 132 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 6 124 2.2E-40 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 NHAM_RS18550 1cb3b56163d48f6f957fa36bc89ece72 132 Gene3D G3DSA:1.20.1300.10 3 124 2.1E-40 T 22-04-2016 NHAM_RS18550 1cb3b56163d48f6f957fa36bc89ece72 132 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 5 121 3.5E-29 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 NHAM_RS18550 1cb3b56163d48f6f957fa36bc89ece72 132 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 82 95 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 NHAM_RS18550 1cb3b56163d48f6f957fa36bc89ece72 132 PANTHER PTHR10978:SF6 1 130 1.1E-65 T 22-04-2016 NHAM_RS18550 1cb3b56163d48f6f957fa36bc89ece72 132 PIRSF PIRSF000178 1 126 6.7E-38 T 22-04-2016 NHAM_RS18550 1cb3b56163d48f6f957fa36bc89ece72 132 PANTHER PTHR10978 1 130 1.1E-65 T 22-04-2016 NHAM_RS18550 1cb3b56163d48f6f957fa36bc89ece72 132 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 7 31 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 NHAM_RS18550 1cb3b56163d48f6f957fa36bc89ece72 132 SUPERFAMILY SSF81343 3 124 5.4E-33 T 22-04-2016 NHAM_RS08815 b87bccad4a3abecbcbd8d769f5b17928 540 Pfam PF03354 Phage Terminase 48 517 7.3E-51 T 22-04-2016 IPR005021 Phage terminase NHAM_RS08815 b87bccad4a3abecbcbd8d769f5b17928 540 PANTHER PTHR41287 24 536 2.9E-72 T 22-04-2016 NHAM_RS02175 797814bb0f6bda31172c6108c458a705 587 SMART SM00382 369 554 3.8E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS02175 797814bb0f6bda31172c6108c458a705 587 PANTHER PTHR24221 10 587 6.2E-170 T 22-04-2016 NHAM_RS02175 797814bb0f6bda31172c6108c458a705 587 SUPERFAMILY SSF52540 337 576 2.3E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02175 797814bb0f6bda31172c6108c458a705 587 SUPERFAMILY SSF90123 484 497 1.07E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS02175 797814bb0f6bda31172c6108c458a705 587 SUPERFAMILY SSF90123 16 308 1.07E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS02175 797814bb0f6bda31172c6108c458a705 587 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS02175 797814bb0f6bda31172c6108c458a705 587 Gene3D G3DSA:1.20.1560.10 16 314 2.0E-31 T 22-04-2016 NHAM_RS02175 797814bb0f6bda31172c6108c458a705 587 Pfam PF00005 ABC transporter 362 508 3.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS02175 797814bb0f6bda31172c6108c458a705 587 Pfam PF00664 ABC transporter transmembrane region 28 287 1.9E-16 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS02175 797814bb0f6bda31172c6108c458a705 587 Gene3D G3DSA:3.40.50.300 343 573 3.6E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07710 f65b149a5603ae1638234cca7ea53f51 584 SUPERFAMILY SSF52540 130 506 1.08E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07710 f65b149a5603ae1638234cca7ea53f51 584 PANTHER PTHR30121 9 555 6.6E-158 T 22-04-2016 NHAM_RS07710 f65b149a5603ae1638234cca7ea53f51 584 PANTHER PTHR30121:SF1 9 555 6.6E-158 T 22-04-2016 NHAM_RS07710 f65b149a5603ae1638234cca7ea53f51 584 Gene3D G3DSA:3.40.50.300 134 212 5.7E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07710 f65b149a5603ae1638234cca7ea53f51 584 Gene3D G3DSA:3.40.50.300 336 503 5.7E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07710 f65b149a5603ae1638234cca7ea53f51 584 Pfam PF01935 Domain of unknown function DUF87 127 372 2.1E-48 T 22-04-2016 IPR002789 Helicase HerA, central domain NHAM_RS10395 908c18ee1743e41530a0815ffbc863a9 243 PANTHER PTHR34698:SF2 6 242 3.2E-91 T 22-04-2016 NHAM_RS10395 908c18ee1743e41530a0815ffbc863a9 243 Gene3D G3DSA:3.30.1360.40 9 81 1.9E-25 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain NHAM_RS10395 908c18ee1743e41530a0815ffbc863a9 243 Pfam PF02682 Allophanate hydrolase subunit 1 9 208 6.0E-66 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D NHAM_RS10395 908c18ee1743e41530a0815ffbc863a9 243 SMART SM00796 8 208 6.2E-86 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D NHAM_RS10395 908c18ee1743e41530a0815ffbc863a9 243 PANTHER PTHR34698 6 242 3.2E-91 T 22-04-2016 NHAM_RS10395 908c18ee1743e41530a0815ffbc863a9 243 SUPERFAMILY SSF160467 9 98 9.15E-24 T 22-04-2016 NHAM_RS10395 908c18ee1743e41530a0815ffbc863a9 243 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 14 216 7.3E-48 T 22-04-2016 IPR010016 KipI family NHAM_RS10395 908c18ee1743e41530a0815ffbc863a9 243 SUPERFAMILY SSF50891 94 224 3.79E-40 T 22-04-2016 IPR029000 Cyclophilin-like domain NHAM_RS10395 908c18ee1743e41530a0815ffbc863a9 243 Gene3D G3DSA:2.40.100.10 94 229 3.7E-42 T 22-04-2016 IPR029000 Cyclophilin-like domain NHAM_RS06605 e56514f18b4b296dddaecf94ff60c776 314 Gene3D G3DSA:3.40.50.2000 167 292 7.5E-31 T 22-04-2016 NHAM_RS06605 e56514f18b4b296dddaecf94ff60c776 314 PANTHER PTHR30160:SF8 4 292 6.1E-68 T 22-04-2016 NHAM_RS06605 e56514f18b4b296dddaecf94ff60c776 314 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 4 313 5.2E-114 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 NHAM_RS06605 e56514f18b4b296dddaecf94ff60c776 314 PANTHER PTHR30160 4 292 6.1E-68 T 22-04-2016 NHAM_RS06605 e56514f18b4b296dddaecf94ff60c776 314 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 79 297 2.6E-46 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NHAM_RS06605 e56514f18b4b296dddaecf94ff60c776 314 Gene3D G3DSA:3.40.50.2000 4 157 1.0E-28 T 22-04-2016 NHAM_RS06605 e56514f18b4b296dddaecf94ff60c776 314 SUPERFAMILY SSF53756 4 300 3.04E-64 T 22-04-2016 NHAM_RS09370 232e428ae360a143072ed2369cbde756 319 TIGRFAM TIGR00510 lipA: lipoyl synthase 30 311 3.3E-111 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NHAM_RS09370 232e428ae360a143072ed2369cbde756 319 Hamap MF_00206 Lipoyl synthase [lipA]. 1 315 151.401 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NHAM_RS09370 232e428ae360a143072ed2369cbde756 319 Pfam PF04055 Radical SAM superfamily 84 243 4.6E-11 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NHAM_RS09370 232e428ae360a143072ed2369cbde756 319 SUPERFAMILY SSF102114 44 307 4.05E-62 T 22-04-2016 NHAM_RS09370 232e428ae360a143072ed2369cbde756 319 PANTHER PTHR10949 30 309 5.1E-157 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NHAM_RS09370 232e428ae360a143072ed2369cbde756 319 PIRSF PIRSF005963 4 318 3.0E-129 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NHAM_RS09370 232e428ae360a143072ed2369cbde756 319 Gene3D G3DSA:3.20.20.70 46 313 5.5E-67 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS09370 232e428ae360a143072ed2369cbde756 319 SMART SM00729 77 284 2.0E-10 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 14 533 49.798 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 PRINTS PR00315 GTP-binding elongation factor signature 75 83 2.0E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 PRINTS PR00315 GTP-binding elongation factor signature 95 105 2.0E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 PRINTS PR00315 GTP-binding elongation factor signature 147 156 2.0E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 PRINTS PR00315 GTP-binding elongation factor signature 25 38 2.0E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 PRINTS PR00315 GTP-binding elongation factor signature 111 122 2.0E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 16 533 7.4E-199 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 163 2.5E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 Gene3D G3DSA:3.30.70.870 401 470 5.3E-10 T 22-04-2016 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 PANTHER PTHR23115 257 470 5.5E-218 T 22-04-2016 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 PANTHER PTHR23115 6 194 5.5E-218 T 22-04-2016 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 SUPERFAMILY SSF50447 268 399 1.27E-26 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 Gene3D G3DSA:2.40.30.10 299 400 4.9E-21 T 22-04-2016 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 PANTHER PTHR23115:SF69 257 470 5.5E-218 T 22-04-2016 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 PANTHER PTHR23115:SF69 6 194 5.5E-218 T 22-04-2016 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 Pfam PF00009 Elongation factor Tu GTP binding domain 23 282 9.3E-49 T 22-04-2016 NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 68 83 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 SUPERFAMILY SSF52540 20 283 6.75E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 SUPERFAMILY SSF54980 399 470 1.8E-12 T 22-04-2016 IPR009022 Elongation factor G, III-V domain NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 Pfam PF16658 Class II release factor RF3, C-terminal domain 393 520 2.1E-40 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal NHAM_RS08580 2e66d083640a0acaa13d4e94264a010e 539 Gene3D G3DSA:3.40.50.300 20 287 3.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 PANTHER PTHR22773:SF46 1 580 6.2E-212 T 22-04-2016 NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 Pfam PF00361 Proton-conducting membrane transporter 132 408 2.3E-66 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 9 783 5.8E-281 T 22-04-2016 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 826 946 4.0E-29 T 22-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 Pfam PF13244 Domain of unknown function (DUF4040) 622 685 1.1E-19 T 22-04-2016 IPR025383 Domain of unknown function DUF4040 NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 109 129 8.8E-39 T 22-04-2016 NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 222 243 8.8E-39 T 22-04-2016 NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 8.8E-39 T 22-04-2016 NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 8.8E-39 T 22-04-2016 NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 8.8E-39 T 22-04-2016 NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 156 177 8.8E-39 T 22-04-2016 NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 244 270 8.8E-39 T 22-04-2016 NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 119 3.8E-9 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal NHAM_RS05155 18137f33d8c0ae693a193ff74310b795 978 PANTHER PTHR22773 1 580 6.2E-212 T 22-04-2016 NHAM_RS16220 cbe653d6dfb1adf0e64de955dd2206a2 164 PANTHER PTHR33695 8 163 2.7E-39 T 22-04-2016 NHAM_RS16220 cbe653d6dfb1adf0e64de955dd2206a2 164 PANTHER PTHR33695:SF1 8 163 2.7E-39 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NHAM_RS16220 cbe653d6dfb1adf0e64de955dd2206a2 164 ProSitePatterns PS00855 Signal peptidases II signature. 99 111 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NHAM_RS16220 cbe653d6dfb1adf0e64de955dd2206a2 164 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 161 14.59 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NHAM_RS16220 cbe653d6dfb1adf0e64de955dd2206a2 164 TIGRFAM TIGR00077 lspA: signal peptidase II 9 158 2.8E-31 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NHAM_RS16220 cbe653d6dfb1adf0e64de955dd2206a2 164 Pfam PF01252 Signal peptidase (SPase) II 11 155 5.7E-32 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NHAM_RS16220 cbe653d6dfb1adf0e64de955dd2206a2 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 136 152 6.2E-14 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NHAM_RS16220 cbe653d6dfb1adf0e64de955dd2206a2 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 50 58 6.2E-14 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NHAM_RS16220 cbe653d6dfb1adf0e64de955dd2206a2 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 96 111 6.2E-14 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 NHAM_RS15960 0aa425c7664e778ce29841cb606249a5 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS15960 0aa425c7664e778ce29841cb606249a5 405 Gene3D G3DSA:3.90.1150.10 288 398 5.1E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS15960 0aa425c7664e778ce29841cb606249a5 405 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 5 395 2.8E-146 T 22-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 NHAM_RS15960 0aa425c7664e778ce29841cb606249a5 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 9 396 37.799 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 NHAM_RS15960 0aa425c7664e778ce29841cb606249a5 405 PANTHER PTHR11986:SF18 5 403 8.6E-199 T 22-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 NHAM_RS15960 0aa425c7664e778ce29841cb606249a5 405 Pfam PF00202 Aminotransferase class-III 13 395 3.5E-119 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS15960 0aa425c7664e778ce29841cb606249a5 405 PANTHER PTHR11986 5 403 8.6E-199 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS15960 0aa425c7664e778ce29841cb606249a5 405 SUPERFAMILY SSF53383 13 397 1.12E-128 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS15960 0aa425c7664e778ce29841cb606249a5 405 Gene3D G3DSA:3.40.640.10 55 287 5.0E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 Pfam PF00128 Alpha amylase, catalytic domain 124 207 9.8E-14 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 Pfam PF11941 Domain of unknown function (DUF3459) 498 582 9.8E-13 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 SUPERFAMILY SSF51445 87 508 1.37E-97 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 Gene3D G3DSA:3.20.20.80 103 437 5.0E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 Gene3D G3DSA:3.20.20.80 480 509 5.0E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 Gene3D G3DSA:2.60.40.10 7 89 3.1E-26 T 22-04-2016 IPR013783 Immunoglobulin-like fold NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 PANTHER PTHR10357:SF110 5 259 4.5E-107 T 22-04-2016 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 PANTHER PTHR10357:SF110 491 553 4.5E-107 T 22-04-2016 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 PANTHER PTHR10357:SF110 280 462 4.5E-107 T 22-04-2016 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 6 65 2.0E-7 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 PIRSF PIRSF006337 4 582 8.8E-217 T 22-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 PANTHER PTHR10357 5 259 4.5E-107 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 PANTHER PTHR10357 491 553 4.5E-107 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 PANTHER PTHR10357 280 462 4.5E-107 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 SMART SM00642 107 452 1.4E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 16 554 4.4E-200 T 22-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 NHAM_RS07470 8488f5c64fe9de8f87b344e1ed1d37f3 587 SUPERFAMILY SSF81296 6 91 1.5E-19 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS13325 30c5ac2f6cbca1f841b7ff8760170903 410 Gene3D G3DSA:3.40.50.410 212 320 2.9E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A NHAM_RS13325 30c5ac2f6cbca1f841b7ff8760170903 410 PANTHER PTHR39338 1 393 2.1E-171 T 22-04-2016 NHAM_RS13325 30c5ac2f6cbca1f841b7ff8760170903 410 Pfam PF05762 VWA domain containing CoxE-like protein 159 376 6.9E-80 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like NHAM_RS13325 30c5ac2f6cbca1f841b7ff8760170903 410 PANTHER PTHR39338:SF1 1 393 2.1E-171 T 22-04-2016 NHAM_RS13325 30c5ac2f6cbca1f841b7ff8760170903 410 SMART SM00327 213 376 3.8E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A NHAM_RS13325 30c5ac2f6cbca1f841b7ff8760170903 410 SUPERFAMILY SSF53300 212 343 2.23E-16 T 22-04-2016 IPR002035 von Willebrand factor, type A NHAM_RS13325 30c5ac2f6cbca1f841b7ff8760170903 410 PIRSF PIRSF010256 3 387 6.0E-142 T 22-04-2016 IPR011195 Uncharacterised conserved protein UCP010256 NHAM_RS10550 c6eb7527033eff9a533b25b67997c002 563 Pfam PF01895 PhoU domain 343 422 3.9E-10 T 22-04-2016 IPR026022 PhoU domain NHAM_RS10550 c6eb7527033eff9a533b25b67997c002 563 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 4 310 2.6E-67 T 22-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 NHAM_RS10550 c6eb7527033eff9a533b25b67997c002 563 Gene3D G3DSA:1.20.58.220 328 422 3.6E-13 T 22-04-2016 NHAM_RS10550 c6eb7527033eff9a533b25b67997c002 563 PANTHER PTHR10010:SF26 6 453 1.7E-32 T 22-04-2016 NHAM_RS10550 c6eb7527033eff9a533b25b67997c002 563 Pfam PF02690 Na+/Pi-cotransporter 162 229 9.7E-12 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 NHAM_RS10550 c6eb7527033eff9a533b25b67997c002 563 Pfam PF02690 Na+/Pi-cotransporter 15 149 1.9E-35 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 NHAM_RS10550 c6eb7527033eff9a533b25b67997c002 563 SUPERFAMILY SSF109755 323 536 3.24E-35 T 22-04-2016 NHAM_RS10550 c6eb7527033eff9a533b25b67997c002 563 PANTHER PTHR10010 6 453 1.7E-32 T 22-04-2016 NHAM_RS16195 7199cf6fd5b5c6bb79ea0071d9e9982f 483 Pfam PF00563 EAL domain 188 420 7.1E-44 T 22-04-2016 IPR001633 EAL domain NHAM_RS16195 7199cf6fd5b5c6bb79ea0071d9e9982f 483 SMART SM00052 180 425 5.2E-11 T 22-04-2016 IPR001633 EAL domain NHAM_RS16195 7199cf6fd5b5c6bb79ea0071d9e9982f 483 SUPERFAMILY SSF141868 187 425 7.45E-39 T 22-04-2016 IPR001633 EAL domain NHAM_RS16195 7199cf6fd5b5c6bb79ea0071d9e9982f 483 PANTHER PTHR33121:SF10 187 436 2.1E-48 T 22-04-2016 NHAM_RS16195 7199cf6fd5b5c6bb79ea0071d9e9982f 483 PANTHER PTHR33121 187 436 2.1E-48 T 22-04-2016 NHAM_RS16195 7199cf6fd5b5c6bb79ea0071d9e9982f 483 Gene3D G3DSA:3.20.20.450 186 424 6.1E-37 T 22-04-2016 IPR001633 EAL domain NHAM_RS00750 de5a0288eac40996ecda4a8e7125ef2e 211 Gene3D G3DSA:3.90.950.10 5 206 1.5E-71 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like NHAM_RS00750 de5a0288eac40996ecda4a8e7125ef2e 211 PANTHER PTHR11067:SF9 2 205 4.3E-66 T 22-04-2016 NHAM_RS00750 de5a0288eac40996ecda4a8e7125ef2e 211 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 8 206 3.1E-46 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 NHAM_RS00750 de5a0288eac40996ecda4a8e7125ef2e 211 PANTHER PTHR11067 2 205 4.3E-66 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 NHAM_RS00750 de5a0288eac40996ecda4a8e7125ef2e 211 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 7 209 46.0 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 NHAM_RS00750 de5a0288eac40996ecda4a8e7125ef2e 211 SUPERFAMILY SSF52972 5 206 4.97E-61 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like NHAM_RS00750 de5a0288eac40996ecda4a8e7125ef2e 211 Pfam PF01725 Ham1 family 9 205 4.0E-46 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 NHAM_RS07420 97cc5cc564f5ee75a4579265f6660f7d 99 Pfam PF00216 Bacterial DNA-binding protein 5 99 1.3E-22 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS07420 97cc5cc564f5ee75a4579265f6660f7d 99 PANTHER PTHR33175:SF1 5 99 3.7E-33 T 22-04-2016 NHAM_RS07420 97cc5cc564f5ee75a4579265f6660f7d 99 PANTHER PTHR33175 5 99 3.7E-33 T 22-04-2016 NHAM_RS07420 97cc5cc564f5ee75a4579265f6660f7d 99 SMART SM00411 5 99 3.5E-9 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS07420 97cc5cc564f5ee75a4579265f6660f7d 99 SUPERFAMILY SSF47729 5 99 1.02E-21 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NHAM_RS07420 97cc5cc564f5ee75a4579265f6660f7d 99 Gene3D G3DSA:4.10.520.10 5 99 8.2E-22 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NHAM_RS16480 14088e5e2d676cf52f2a2fb31a0ad8b6 303 PANTHER PTHR20861:SF2 12 297 1.0E-64 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS16480 14088e5e2d676cf52f2a2fb31a0ad8b6 303 Pfam PF00288 GHMP kinases N terminal domain 100 154 4.1E-6 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 NHAM_RS16480 14088e5e2d676cf52f2a2fb31a0ad8b6 303 PIRSF PIRSF010376 12 303 3.5E-73 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS16480 14088e5e2d676cf52f2a2fb31a0ad8b6 303 Gene3D G3DSA:3.30.230.10 17 170 4.7E-40 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS16480 14088e5e2d676cf52f2a2fb31a0ad8b6 303 PANTHER PTHR20861 12 297 1.0E-64 T 22-04-2016 NHAM_RS16480 14088e5e2d676cf52f2a2fb31a0ad8b6 303 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 15 283 2.1E-45 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS16480 14088e5e2d676cf52f2a2fb31a0ad8b6 303 Gene3D G3DSA:3.30.70.890 172 299 1.7E-29 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain NHAM_RS16480 14088e5e2d676cf52f2a2fb31a0ad8b6 303 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 14 302 27.943 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS16480 14088e5e2d676cf52f2a2fb31a0ad8b6 303 SUPERFAMILY SSF54211 17 170 2.05E-28 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS16480 14088e5e2d676cf52f2a2fb31a0ad8b6 303 SUPERFAMILY SSF55060 172 300 2.25E-27 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain NHAM_RS16480 14088e5e2d676cf52f2a2fb31a0ad8b6 303 Pfam PF08544 GHMP kinases C terminal 230 286 1.3E-7 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain NHAM_RS16355 6596cb9bb6b14c7374a8b9179e55d43d 280 PANTHER PTHR31609 3 280 5.9E-58 T 22-04-2016 NHAM_RS16355 6596cb9bb6b14c7374a8b9179e55d43d 280 SUPERFAMILY SSF88713 8 279 1.7E-58 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NHAM_RS16355 6596cb9bb6b14c7374a8b9179e55d43d 280 Gene3D G3DSA:3.20.20.370 8 279 3.9E-62 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS16355 6596cb9bb6b14c7374a8b9179e55d43d 280 Pfam PF04794 YdjC-like protein 10 273 8.0E-47 T 22-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like NHAM_RS09870 f04ca9f5f76d8e856488e3020e3e53c5 272 SUPERFAMILY SSF52402 1 140 1.0E-8 T 22-04-2016 NHAM_RS09870 f04ca9f5f76d8e856488e3020e3e53c5 272 Gene3D G3DSA:3.40.50.620 2 114 4.6E-4 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS09870 f04ca9f5f76d8e856488e3020e3e53c5 272 Gene3D G3DSA:3.40.50.620 132 266 8.8E-17 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS09870 f04ca9f5f76d8e856488e3020e3e53c5 272 Pfam PF00582 Universal stress protein family 149 269 1.6E-9 T 22-04-2016 IPR006016 UspA GO:0006950 NHAM_RS09870 f04ca9f5f76d8e856488e3020e3e53c5 272 SUPERFAMILY SSF52402 149 270 1.51E-17 T 22-04-2016 NHAM_RS18965 e6b395db8bd7717c4d1e4012c0fc695f 389 Gene3D G3DSA:3.40.630.10 331 387 3.0E-65 T 22-04-2016 NHAM_RS18965 e6b395db8bd7717c4d1e4012c0fc695f 389 Gene3D G3DSA:3.40.630.10 4 198 3.0E-65 T 22-04-2016 NHAM_RS18965 e6b395db8bd7717c4d1e4012c0fc695f 389 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 67 76 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 NHAM_RS18965 e6b395db8bd7717c4d1e4012c0fc695f 389 SUPERFAMILY SSF55031 190 289 8.52E-23 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS18965 e6b395db8bd7717c4d1e4012c0fc695f 389 SUPERFAMILY SSF53187 4 189 5.78E-59 T 22-04-2016 NHAM_RS18965 e6b395db8bd7717c4d1e4012c0fc695f 389 SUPERFAMILY SSF53187 307 387 5.78E-59 T 22-04-2016 NHAM_RS18965 e6b395db8bd7717c4d1e4012c0fc695f 389 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 389 48.249 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 NHAM_RS18965 e6b395db8bd7717c4d1e4012c0fc695f 389 Gene3D G3DSA:3.30.70.360 199 290 3.5E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS18965 e6b395db8bd7717c4d1e4012c0fc695f 389 PANTHER PTHR11014 4 389 6.1E-70 T 22-04-2016 NHAM_RS18965 e6b395db8bd7717c4d1e4012c0fc695f 389 Pfam PF07687 Peptidase dimerisation domain 186 290 8.9E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS18965 e6b395db8bd7717c4d1e4012c0fc695f 389 Pfam PF01546 Peptidase family M20/M25/M40 68 385 8.8E-39 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NHAM_RS18965 e6b395db8bd7717c4d1e4012c0fc695f 389 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 386 6.0E-122 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 NHAM_RS04020 221b1046bf3036ea864652dbfb0451a9 251 PANTHER PTHR32319 7 250 4.9E-110 T 22-04-2016 NHAM_RS04020 221b1046bf3036ea864652dbfb0451a9 251 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 14 243 2.0E-62 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 NHAM_RS04020 221b1046bf3036ea864652dbfb0451a9 251 SMART SM00363 13 77 3.2E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS04020 221b1046bf3036ea864652dbfb0451a9 251 SUPERFAMILY SSF55174 12 72 3.24E-9 T 22-04-2016 NHAM_RS04020 221b1046bf3036ea864652dbfb0451a9 251 PANTHER PTHR32319:SF0 7 250 4.9E-110 T 22-04-2016 NHAM_RS04020 221b1046bf3036ea864652dbfb0451a9 251 Pfam PF01728 FtsJ-like methyltransferase 68 248 3.9E-20 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 NHAM_RS04020 221b1046bf3036ea864652dbfb0451a9 251 PIRSF PIRSF005578 8 251 5.8E-94 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 NHAM_RS04020 221b1046bf3036ea864652dbfb0451a9 251 Pfam PF01479 S4 domain 14 54 9.8E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS04020 221b1046bf3036ea864652dbfb0451a9 251 SUPERFAMILY SSF53335 67 248 3.99E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS04020 221b1046bf3036ea864652dbfb0451a9 251 Gene3D G3DSA:3.10.290.10 13 108 5.6E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS02285 5369e260000a7fbf9b08fae60f2f442b 97 Gene3D G3DSA:3.30.1340.10 10 95 3.3E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like NHAM_RS02285 5369e260000a7fbf9b08fae60f2f442b 97 PRINTS PR00107 Phosphocarrier protein signature 61 78 6.2E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like NHAM_RS02285 5369e260000a7fbf9b08fae60f2f442b 97 PRINTS PR00107 Phosphocarrier protein signature 46 61 6.2E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like NHAM_RS02285 5369e260000a7fbf9b08fae60f2f442b 97 PRINTS PR00107 Phosphocarrier protein signature 21 37 6.2E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like NHAM_RS02285 5369e260000a7fbf9b08fae60f2f442b 97 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 11 89 9.4E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like NHAM_RS02285 5369e260000a7fbf9b08fae60f2f442b 97 PANTHER PTHR33705:SF2 7 97 1.6E-36 T 22-04-2016 NHAM_RS02285 5369e260000a7fbf9b08fae60f2f442b 97 Pfam PF00381 PTS HPr component phosphorylation site 11 89 1.3E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like NHAM_RS02285 5369e260000a7fbf9b08fae60f2f442b 97 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 21 28 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site NHAM_RS02285 5369e260000a7fbf9b08fae60f2f442b 97 SUPERFAMILY SSF55594 11 96 3.93E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like NHAM_RS02285 5369e260000a7fbf9b08fae60f2f442b 97 PANTHER PTHR33705 7 97 1.6E-36 T 22-04-2016 NHAM_RS11200 78ae9e99fc15c8f4e0a64a93c13ee5ea 736 Pfam PF00593 TonB dependent receptor 480 735 1.6E-22 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS11200 78ae9e99fc15c8f4e0a64a93c13ee5ea 736 PANTHER PTHR32552 93 736 9.3E-36 T 22-04-2016 NHAM_RS11200 78ae9e99fc15c8f4e0a64a93c13ee5ea 736 PANTHER PTHR32552 12 44 9.3E-36 T 22-04-2016 NHAM_RS11200 78ae9e99fc15c8f4e0a64a93c13ee5ea 736 Gene3D G3DSA:2.40.170.20 212 736 4.6E-74 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS11200 78ae9e99fc15c8f4e0a64a93c13ee5ea 736 SUPERFAMILY SSF56935 32 44 1.62E-94 T 22-04-2016 NHAM_RS11200 78ae9e99fc15c8f4e0a64a93c13ee5ea 736 SUPERFAMILY SSF56935 93 736 1.62E-94 T 22-04-2016 NHAM_RS11200 78ae9e99fc15c8f4e0a64a93c13ee5ea 736 Gene3D G3DSA:2.170.130.10 91 211 2.5E-25 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS11200 78ae9e99fc15c8f4e0a64a93c13ee5ea 736 Pfam PF07715 TonB-dependent Receptor Plug Domain 102 211 6.2E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS09165 b3e26f194e415bc99ccad383bd126ca6 255 Gene3D G3DSA:3.40.1210.10 1 251 2.7E-75 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NHAM_RS09165 b3e26f194e415bc99ccad383bd126ca6 255 Pfam PF01975 Survival protein SurE 3 187 2.2E-52 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NHAM_RS09165 b3e26f194e415bc99ccad383bd126ca6 255 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 255 33.807 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NHAM_RS09165 b3e26f194e415bc99ccad383bd126ca6 255 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 241 2.7E-58 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NHAM_RS09165 b3e26f194e415bc99ccad383bd126ca6 255 SUPERFAMILY SSF64167 1 253 1.44E-74 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NHAM_RS09165 b3e26f194e415bc99ccad383bd126ca6 255 PANTHER PTHR30457 1 250 2.5E-76 T 22-04-2016 NHAM_RS06690 49962217c3e66526beb3d38150a41152 265 SUPERFAMILY SSF56300 6 249 2.53E-35 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS06690 49962217c3e66526beb3d38150a41152 265 Gene3D G3DSA:3.60.21.10 194 246 1.8E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS06690 49962217c3e66526beb3d38150a41152 265 Gene3D G3DSA:3.60.21.10 11 144 1.8E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS06690 49962217c3e66526beb3d38150a41152 265 PANTHER PTHR34990 1 265 2.4E-141 T 22-04-2016 NHAM_RS06690 49962217c3e66526beb3d38150a41152 265 PANTHER PTHR34990:SF2 1 265 2.4E-141 T 22-04-2016 NHAM_RS06690 49962217c3e66526beb3d38150a41152 265 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 12 226 7.2E-12 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type NHAM_RS08000 7f9c2a0afff94f063d2a18a499aee392 64 PANTHER PTHR15892 2 60 2.5E-19 T 22-04-2016 NHAM_RS08000 7f9c2a0afff94f063d2a18a499aee392 64 SUPERFAMILY SSF55129 6 60 1.96E-17 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain NHAM_RS08000 7f9c2a0afff94f063d2a18a499aee392 64 PIRSF PIRSF002211 1 64 7.1E-23 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 NHAM_RS08000 7f9c2a0afff94f063d2a18a499aee392 64 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 8 61 1.7E-20 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 NHAM_RS08000 7f9c2a0afff94f063d2a18a499aee392 64 Gene3D G3DSA:3.30.1390.20 5 62 4.9E-27 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain NHAM_RS08000 7f9c2a0afff94f063d2a18a499aee392 64 Pfam PF00327 Ribosomal protein L30p/L7e 8 58 6.8E-15 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain NHAM_RS08000 7f9c2a0afff94f063d2a18a499aee392 64 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 5 62 17.225 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 NHAM_RS07130 a683e4c720bf921288f0b5650d78529f 359 PANTHER PTHR30531:SF0 6 357 2.1E-106 T 22-04-2016 NHAM_RS07130 a683e4c720bf921288f0b5650d78529f 359 SUPERFAMILY SSF160544 245 351 2.09E-39 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal NHAM_RS07130 a683e4c720bf921288f0b5650d78529f 359 PANTHER PTHR30531 6 357 2.1E-106 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NHAM_RS07130 a683e4c720bf921288f0b5650d78529f 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 1.5E-37 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NHAM_RS07130 a683e4c720bf921288f0b5650d78529f 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.5E-37 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NHAM_RS07130 a683e4c720bf921288f0b5650d78529f 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 1.5E-37 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NHAM_RS07130 a683e4c720bf921288f0b5650d78529f 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 1.5E-37 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NHAM_RS07130 a683e4c720bf921288f0b5650d78529f 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 1.5E-37 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NHAM_RS07130 a683e4c720bf921288f0b5650d78529f 359 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 347 3.6E-119 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NHAM_RS07130 a683e4c720bf921288f0b5650d78529f 359 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 9 351 2.0E-109 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 NHAM_RS07130 a683e4c720bf921288f0b5650d78529f 359 Gene3D G3DSA:3.40.1690.10 220 352 4.2E-57 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal NHAM_RS06580 0685c42b1f04457651bee7029653b7a1 561 PIRSF PIRSF003128 1 561 1.2E-151 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 NHAM_RS06580 0685c42b1f04457651bee7029653b7a1 561 SUPERFAMILY SSF52540 345 512 5.14E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06580 0685c42b1f04457651bee7029653b7a1 561 SUPERFAMILY SSF52540 3 50 5.14E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06580 0685c42b1f04457651bee7029653b7a1 561 PANTHER PTHR11059 2 560 8.2E-150 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 NHAM_RS06580 0685c42b1f04457651bee7029653b7a1 561 Pfam PF02463 RecF/RecN/SMC N terminal domain 14 511 1.0E-12 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal NHAM_RS06580 0685c42b1f04457651bee7029653b7a1 561 SUPERFAMILY SSF52540 1 221 1.14E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06580 0685c42b1f04457651bee7029653b7a1 561 Gene3D G3DSA:3.40.50.300 1 211 2.7E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06580 0685c42b1f04457651bee7029653b7a1 561 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 559 6.1E-141 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 NHAM_RS17575 55a1a47ed77a6c71602a996547c9e969 358 PANTHER PTHR13748 3 358 8.4E-158 T 22-04-2016 NHAM_RS17575 55a1a47ed77a6c71602a996547c9e969 358 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 188 8.4E-60 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NHAM_RS17575 55a1a47ed77a6c71602a996547c9e969 358 Gene3D G3DSA:3.30.1220.10 243 357 1.4E-42 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NHAM_RS17575 55a1a47ed77a6c71602a996547c9e969 358 Gene3D G3DSA:3.40.50.300 11 208 6.6E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17575 55a1a47ed77a6c71602a996547c9e969 358 SUPERFAMILY SSF90002 263 356 1.26E-27 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NHAM_RS17575 55a1a47ed77a6c71602a996547c9e969 358 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 262 356 3.4E-25 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NHAM_RS17575 55a1a47ed77a6c71602a996547c9e969 358 PANTHER PTHR13748:SF43 3 358 8.4E-158 T 22-04-2016 NHAM_RS17575 55a1a47ed77a6c71602a996547c9e969 358 SMART SM00833 262 356 3.9E-19 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NHAM_RS17575 55a1a47ed77a6c71602a996547c9e969 358 SUPERFAMILY SSF52540 11 217 9.25E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14925 a2c0703f6f8654e9890ac7daab465845 256 SUPERFAMILY SSF53335 3 210 3.84E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS14925 a2c0703f6f8654e9890ac7daab465845 256 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 256 41.386 T 22-04-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 NHAM_RS14925 a2c0703f6f8654e9890ac7daab465845 256 Gene3D G3DSA:1.10.150.290 182 236 1.8E-30 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 NHAM_RS14925 a2c0703f6f8654e9890ac7daab465845 256 PANTHER PTHR10108 1 235 1.2E-65 T 22-04-2016 NHAM_RS14925 a2c0703f6f8654e9890ac7daab465845 256 PANTHER PTHR10108:SF890 1 235 1.2E-65 T 22-04-2016 NHAM_RS14925 a2c0703f6f8654e9890ac7daab465845 256 Gene3D G3DSA:3.40.50.150 3 152 3.1E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS14925 a2c0703f6f8654e9890ac7daab465845 256 Pfam PF13649 Methyltransferase domain 36 124 1.9E-12 T 22-04-2016 NHAM_RS18045 ffcc6014a4385adea9e5f95dc073bb62 165 Pfam PF11014 Protein of unknown function (DUF2852) 30 152 1.3E-45 T 22-04-2016 IPR021273 Protein of unknown function DUF2852 NHAM_RS15115 454d528845e6a43a84bc2d698e20fc37 671 Pfam PF00664 ABC transporter transmembrane region 121 374 1.3E-8 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS15115 454d528845e6a43a84bc2d698e20fc37 671 Gene3D G3DSA:3.40.50.300 438 652 2.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15115 454d528845e6a43a84bc2d698e20fc37 671 Pfam PF00005 ABC transporter 445 593 6.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS15115 454d528845e6a43a84bc2d698e20fc37 671 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 113 652 2.5E-207 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 NHAM_RS15115 454d528845e6a43a84bc2d698e20fc37 671 SUPERFAMILY SSF52540 420 652 7.8E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15115 454d528845e6a43a84bc2d698e20fc37 671 PANTHER PTHR24222:SF0 113 652 5.5E-186 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 NHAM_RS15115 454d528845e6a43a84bc2d698e20fc37 671 PANTHER PTHR24222 113 652 5.5E-186 T 22-04-2016 NHAM_RS15115 454d528845e6a43a84bc2d698e20fc37 671 SMART SM00382 454 641 5.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS15115 454d528845e6a43a84bc2d698e20fc37 671 Gene3D G3DSA:1.20.1560.10 116 413 9.5E-35 T 22-04-2016 NHAM_RS15115 454d528845e6a43a84bc2d698e20fc37 671 SUPERFAMILY SSF90123 116 417 4.19E-38 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS15115 454d528845e6a43a84bc2d698e20fc37 671 ProSitePatterns PS00211 ABC transporters family signature. 566 580 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS00370 f15de7b76e4dbaaa59f5856c9b24381f 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NHAM_RS00370 f15de7b76e4dbaaa59f5856c9b24381f 119 PANTHER PTHR10986:SF12 2 117 6.4E-55 T 22-04-2016 NHAM_RS00370 f15de7b76e4dbaaa59f5856c9b24381f 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 26.866 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NHAM_RS00370 f15de7b76e4dbaaa59f5856c9b24381f 119 Pfam PF00453 Ribosomal protein L20 3 109 3.1E-44 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NHAM_RS00370 f15de7b76e4dbaaa59f5856c9b24381f 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.0E-31 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NHAM_RS00370 f15de7b76e4dbaaa59f5856c9b24381f 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.0E-31 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NHAM_RS00370 f15de7b76e4dbaaa59f5856c9b24381f 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.0E-31 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NHAM_RS00370 f15de7b76e4dbaaa59f5856c9b24381f 119 SUPERFAMILY SSF74731 3 117 3.01E-45 T 22-04-2016 NHAM_RS00370 f15de7b76e4dbaaa59f5856c9b24381f 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 1.0E-12 T 22-04-2016 NHAM_RS00370 f15de7b76e4dbaaa59f5856c9b24381f 119 PANTHER PTHR10986 2 117 6.4E-55 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NHAM_RS00370 f15de7b76e4dbaaa59f5856c9b24381f 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.3E-43 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 NHAM_RS00370 f15de7b76e4dbaaa59f5856c9b24381f 119 Gene3D G3DSA:1.10.1900.20 55 117 8.7E-29 T 22-04-2016 NHAM_RS11065 8a14ea807d7dbdf9ec19e4f87b39096b 121 PANTHER PTHR36505 1 115 7.6E-27 T 22-04-2016 NHAM_RS11065 8a14ea807d7dbdf9ec19e4f87b39096b 121 SUPERFAMILY SSF50346 7 116 1.04E-23 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS11065 8a14ea807d7dbdf9ec19e4f87b39096b 121 PANTHER PTHR36505:SF1 1 115 7.6E-27 T 22-04-2016 NHAM_RS11065 8a14ea807d7dbdf9ec19e4f87b39096b 121 Gene3D G3DSA:2.30.30.240 18 74 6.6E-14 T 22-04-2016 NHAM_RS11065 8a14ea807d7dbdf9ec19e4f87b39096b 121 Pfam PF05239 PRC-barrel domain 19 74 1.7E-11 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS15645 13586b2c79015aa1b1d3c87fd52bc11d 1744 SUPERFAMILY SSF81296 519 602 5.67E-12 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS15645 13586b2c79015aa1b1d3c87fd52bc11d 1744 Pfam PF13313 Domain of unknown function (DUF4082) 1585 1732 1.7E-53 T 22-04-2016 IPR025141 Domain of unknown function DUF4082 NHAM_RS15645 13586b2c79015aa1b1d3c87fd52bc11d 1744 Pfam PF13313 Domain of unknown function (DUF4082) 621 771 6.1E-55 T 22-04-2016 IPR025141 Domain of unknown function DUF4082 NHAM_RS15645 13586b2c79015aa1b1d3c87fd52bc11d 1744 Pfam PF13313 Domain of unknown function (DUF4082) 882 1026 3.2E-56 T 22-04-2016 IPR025141 Domain of unknown function DUF4082 NHAM_RS15645 13586b2c79015aa1b1d3c87fd52bc11d 1744 Pfam PF13313 Domain of unknown function (DUF4082) 1233 1377 5.9E-54 T 22-04-2016 IPR025141 Domain of unknown function DUF4082 NHAM_RS15645 13586b2c79015aa1b1d3c87fd52bc11d 1744 SUPERFAMILY SSF49313 1389 1483 6.28E-5 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 NHAM_RS15645 13586b2c79015aa1b1d3c87fd52bc11d 1744 SUPERFAMILY SSF49313 1486 1580 2.93E-5 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 NHAM_RS15645 13586b2c79015aa1b1d3c87fd52bc11d 1744 Gene3D G3DSA:2.60.40.650 519 602 1.6E-11 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 NHAM_RS15645 13586b2c79015aa1b1d3c87fd52bc11d 1744 SUPERFAMILY SSF49313 1132 1227 1.41E-5 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 NHAM_RS15645 13586b2c79015aa1b1d3c87fd52bc11d 1744 Gene3D G3DSA:2.60.40.10 1133 1227 1.7E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold NHAM_RS07370 dbed98e714a23c341ffeb4c2b705ec46 122 PRINTS PR00604 Class IA and IB cytochrome C signature 38 53 5.1E-13 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS07370 dbed98e714a23c341ffeb4c2b705ec46 122 PRINTS PR00604 Class IA and IB cytochrome C signature 87 97 5.1E-13 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS07370 dbed98e714a23c341ffeb4c2b705ec46 122 PRINTS PR00604 Class IA and IB cytochrome C signature 104 112 5.1E-13 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS07370 dbed98e714a23c341ffeb4c2b705ec46 122 PRINTS PR00604 Class IA and IB cytochrome C signature 25 32 5.1E-13 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS07370 dbed98e714a23c341ffeb4c2b705ec46 122 PRINTS PR00604 Class IA and IB cytochrome C signature 54 64 5.1E-13 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS07370 dbed98e714a23c341ffeb4c2b705ec46 122 PRINTS PR00604 Class IA and IB cytochrome C signature 68 84 5.1E-13 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS07370 dbed98e714a23c341ffeb4c2b705ec46 122 PANTHER PTHR11961 16 122 4.8E-24 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS07370 dbed98e714a23c341ffeb4c2b705ec46 122 Pfam PF00034 Cytochrome c 17 113 1.9E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS07370 dbed98e714a23c341ffeb4c2b705ec46 122 SUPERFAMILY SSF46626 13 115 3.35E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS07370 dbed98e714a23c341ffeb4c2b705ec46 122 Gene3D G3DSA:1.10.760.10 13 115 3.1E-35 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS02920 43d441fe4cf9628fea85a2fe204241aa 248 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 236 2.2E-35 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02920 43d441fe4cf9628fea85a2fe204241aa 248 Gene3D G3DSA:3.40.50.10090 145 239 7.8E-8 T 22-04-2016 NHAM_RS02920 43d441fe4cf9628fea85a2fe204241aa 248 Gene3D G3DSA:3.40.50.10090 29 144 1.4E-15 T 22-04-2016 NHAM_RS02920 43d441fe4cf9628fea85a2fe204241aa 248 SUPERFAMILY SSF69618 3 240 3.53E-47 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS13810 e7c12f8310d2878bb40fe334c655a54e 176 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 38 4.7E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS13810 e7c12f8310d2878bb40fe334c655a54e 176 SUPERFAMILY SSF46689 2 44 1.59E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS13810 e7c12f8310d2878bb40fe334c655a54e 176 Pfam PF13977 Bacterial transcriptional repressor 74 169 2.5E-12 T 22-04-2016 NHAM_RS13810 e7c12f8310d2878bb40fe334c655a54e 176 Gene3D G3DSA:1.10.357.10 1 170 3.6E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NHAM_RS13810 e7c12f8310d2878bb40fe334c655a54e 176 PANTHER PTHR30055 1 174 2.3E-20 T 22-04-2016 NHAM_RS13810 e7c12f8310d2878bb40fe334c655a54e 176 ProSitePatterns PS01081 TetR-type HTH domain signature. 6 37 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NHAM_RS13810 e7c12f8310d2878bb40fe334c655a54e 176 SUPERFAMILY SSF48498 56 170 4.15E-19 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NHAM_RS03510 303537a6dd42ffa0c3d8de153200a922 283 SMART SM00830 15 95 2.1E-18 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 NHAM_RS03510 303537a6dd42ffa0c3d8de153200a922 283 SUPERFAMILY SSF48600 6 94 4.12E-17 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 NHAM_RS03510 303537a6dd42ffa0c3d8de153200a922 283 Gene3D G3DSA:1.20.59.10 3 93 2.8E-15 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 NHAM_RS03510 303537a6dd42ffa0c3d8de153200a922 283 Pfam PF01817 Chorismate mutase type II 15 92 3.9E-15 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 NHAM_RS12380 d3360ccd15fec40b27cd99db00bbdb13 145 Pfam PF07370 Protein of unknown function (DUF1489) 5 145 1.1E-56 T 22-04-2016 IPR008320 Uncharacterised conserved protein UCP032025 NHAM_RS12380 d3360ccd15fec40b27cd99db00bbdb13 145 PIRSF PIRSF032025 1 145 2.1E-68 T 22-04-2016 IPR008320 Uncharacterised conserved protein UCP032025 NHAM_RS20485 1a458bf596583cfd21a34f628b682a34 211 Pfam PF01569 PAP2 superfamily 86 195 3.0E-15 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS20485 1a458bf596583cfd21a34f628b682a34 211 Gene3D G3DSA:1.20.144.10 27 191 2.8E-25 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS20485 1a458bf596583cfd21a34f628b682a34 211 SMART SM00014 81 193 7.2E-4 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS20485 1a458bf596583cfd21a34f628b682a34 211 SUPERFAMILY SSF48317 18 208 1.13E-34 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS05450 8e8e2eb5e689759c473366717fd2b005 141 PANTHER PTHR33169 1 118 5.0E-14 T 22-04-2016 NHAM_RS05450 8e8e2eb5e689759c473366717fd2b005 141 Pfam PF03551 Transcriptional regulator PadR-like family 19 85 3.6E-10 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal NHAM_RS05450 8e8e2eb5e689759c473366717fd2b005 141 Gene3D G3DSA:1.10.10.10 9 108 2.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS05450 8e8e2eb5e689759c473366717fd2b005 141 SUPERFAMILY SSF46785 13 108 9.05E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS07735 da9a0dadfb8fb10a6ca3e0243e42c5c8 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 3.3E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS07735 da9a0dadfb8fb10a6ca3e0243e42c5c8 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 3.3E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS07735 da9a0dadfb8fb10a6ca3e0243e42c5c8 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 3.3E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS07735 da9a0dadfb8fb10a6ca3e0243e42c5c8 159 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site NHAM_RS07735 da9a0dadfb8fb10a6ca3e0243e42c5c8 159 PANTHER PTHR33164 7 150 1.3E-24 T 22-04-2016 NHAM_RS07735 da9a0dadfb8fb10a6ca3e0243e42c5c8 159 Gene3D G3DSA:1.10.10.10 4 141 2.2E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS07735 da9a0dadfb8fb10a6ca3e0243e42c5c8 159 SMART SM00347 26 126 2.0E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS07735 da9a0dadfb8fb10a6ca3e0243e42c5c8 159 SUPERFAMILY SSF46785 5 142 8.08E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS07735 da9a0dadfb8fb10a6ca3e0243e42c5c8 159 Pfam PF01047 MarR family 34 90 1.5E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 Pfam PF02910 Fumarate reductase flavoprotein C-term 474 607 1.2E-40 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 Gene3D G3DSA:4.10.80.40 554 607 2.1E-28 T 22-04-2016 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 Gene3D G3DSA:3.50.50.60 365 439 3.0E-124 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 Gene3D G3DSA:3.50.50.60 13 257 3.0E-124 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 24 607 6.6E-243 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 SUPERFAMILY SSF46977 466 607 1.44E-47 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 Pfam PF00890 FAD binding domain 24 419 7.3E-128 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 21 607 6.0E-287 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 SUPERFAMILY SSF56425 251 369 1.26E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 PANTHER PTHR11632:SF51 16 602 0.0 T 22-04-2016 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 PANTHER PTHR11632 16 602 0.0 T 22-04-2016 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 PIRSF PIRSF000171 14 597 6.6E-40 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 SUPERFAMILY SSF51905 373 445 1.0E-78 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 SUPERFAMILY SSF51905 15 274 1.0E-78 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 58 67 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 Gene3D G3DSA:3.90.700.10 258 363 4.5E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain NHAM_RS18560 91948473830df675ca2e656bd1d0cb74 607 Gene3D G3DSA:1.20.58.100 447 553 2.3E-34 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 NHAM_RS20565 53eb18babc7d5120be4930d096fc230a 143 PRINTS PR00502 NUDIX hydrolase family signature 40 54 1.1E-5 T 22-04-2016 IPR020476 NUDIX hydrolase NHAM_RS20565 53eb18babc7d5120be4930d096fc230a 143 PRINTS PR00502 NUDIX hydrolase family signature 54 69 1.1E-5 T 22-04-2016 IPR020476 NUDIX hydrolase NHAM_RS20565 53eb18babc7d5120be4930d096fc230a 143 SUPERFAMILY SSF55811 8 139 3.38E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS20565 53eb18babc7d5120be4930d096fc230a 143 Pfam PF00293 NUDIX domain 13 119 4.1E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NHAM_RS20565 53eb18babc7d5120be4930d096fc230a 143 Gene3D G3DSA:3.90.79.10 10 124 1.9E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS20565 53eb18babc7d5120be4930d096fc230a 143 ProSitePatterns PS00893 Nudix box signature. 45 66 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NHAM_RS20565 53eb18babc7d5120be4930d096fc230a 143 PANTHER PTHR22769 8 119 1.4E-28 T 22-04-2016 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 164 309 2.4E-22 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 PANTHER PTHR11405:SF16 13 310 1.3E-126 T 22-04-2016 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 14 310 9.1E-89 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 Gene3D G3DSA:3.40.50.1370 13 151 9.4E-47 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 60 67 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 14 156 5.1E-37 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 PANTHER PTHR11405 13 310 1.3E-126 T 22-04-2016 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 Gene3D G3DSA:3.40.50.1370 152 290 2.0E-49 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 SUPERFAMILY SSF53671 12 313 9.17E-95 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 13 313 39.224 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 60 79 3.6E-18 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 144 155 3.6E-18 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 276 299 3.6E-18 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 273 3.6E-18 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 50 72 1.2E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 268 273 1.2E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 143 160 1.2E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 88 97 1.2E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 227 236 1.2E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS11625 833f5a43afdecdcd153106bb65e7c73a 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 292 306 1.2E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS18820 6b646a734155076b8d2f2f699ef9e5be 150 SUPERFAMILY SSF75169 29 150 8.36E-18 T 22-04-2016 IPR027396 DsrEFH-like NHAM_RS18820 6b646a734155076b8d2f2f699ef9e5be 150 PANTHER PTHR37691:SF1 1 150 1.0E-27 T 22-04-2016 NHAM_RS18820 6b646a734155076b8d2f2f699ef9e5be 150 Gene3D G3DSA:3.40.1260.10 28 150 3.1E-30 T 22-04-2016 IPR027396 DsrEFH-like NHAM_RS18820 6b646a734155076b8d2f2f699ef9e5be 150 PANTHER PTHR37691 1 150 1.0E-27 T 22-04-2016 NHAM_RS13765 9df5ca406566077e83712b80b7786ded 81 Pfam PF00839 Cysteine rich repeat 35 67 6.0E-5 T 22-04-2016 IPR001893 Cysteine-rich Golgi apparatus protein 1 repeat GO:0016020 NHAM_RS02310 6275ccde21657d1141408131bad8f9b7 247 Gene3D G3DSA:2.30.110.10 4 151 2.5E-46 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NHAM_RS02310 6275ccde21657d1141408131bad8f9b7 247 Pfam PF10615 Protein of unknown function (DUF2470) 165 236 2.7E-12 T 22-04-2016 IPR019595 Domain of unknown function DUF2470 NHAM_RS02310 6275ccde21657d1141408131bad8f9b7 247 PANTHER PTHR13343 2 247 3.0E-47 T 22-04-2016 NHAM_RS02310 6275ccde21657d1141408131bad8f9b7 247 SUPERFAMILY SSF50475 10 243 5.24E-46 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NHAM_RS02310 6275ccde21657d1141408131bad8f9b7 247 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 8 144 3.3E-14 T 22-04-2016 NHAM_RS02310 6275ccde21657d1141408131bad8f9b7 247 PANTHER PTHR13343:SF4 2 247 3.0E-47 T 22-04-2016 NHAM_RS02310 6275ccde21657d1141408131bad8f9b7 247 Gene3D G3DSA:3.20.180.10 154 240 1.5E-32 T 22-04-2016 IPR019595 Domain of unknown function DUF2470 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 SUPERFAMILY SSF109998 258 444 8.63E-45 T 22-04-2016 IPR027304 Trigger factor/SurA domain NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 Gene3D G3DSA:3.30.70.1050 1 125 3.7E-29 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 271 428 1.7E-38 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 SUPERFAMILY SSF54534 110 245 7.27E-28 T 22-04-2016 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 Pfam PF05697 Bacterial trigger factor protein (TF) 1 151 3.0E-35 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 PANTHER PTHR30560:SF3 1 445 3.2E-109 T 22-04-2016 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 Hamap MF_00303 Trigger factor [tig]. 1 433 19.713 T 22-04-2016 IPR005215 Trigger factor GO:0015031 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 TIGRFAM TIGR00115 tig: trigger factor 12 427 1.0E-118 T 22-04-2016 IPR005215 Trigger factor GO:0015031 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 PANTHER PTHR30560 1 445 3.2E-109 T 22-04-2016 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 Gene3D G3DSA:3.10.50.40 163 224 1.4E-9 T 22-04-2016 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 Gene3D G3DSA:1.10.3120.10 225 403 6.5E-46 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 PIRSF PIRSF003095 1 449 9.4E-122 T 22-04-2016 IPR005215 Trigger factor GO:0015031 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 SUPERFAMILY SSF102735 1 138 9.68E-31 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 NHAM_RS11360 b4a436bbc5776d3be467f46d43138eba 453 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 167 243 1.0E-11 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 NHAM_RS02670 a2256084acda0f859a81069c0b3ea482 128 PANTHER PTHR21349 1 122 1.9E-40 T 22-04-2016 NHAM_RS02670 a2256084acda0f859a81069c0b3ea482 128 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 3.0E-28 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02670 a2256084acda0f859a81069c0b3ea482 128 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 7.2E-32 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 NHAM_RS02670 a2256084acda0f859a81069c0b3ea482 128 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 23.367 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02670 a2256084acda0f859a81069c0b3ea482 128 SUPERFAMILY SSF141091 1 100 2.49E-32 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 NHAM_RS16735 3213d891e34ff0b02e074e047df5e418 81 Pfam PF11730 Protein of unknown function (DUF3297) 7 77 5.9E-41 T 22-04-2016 IPR021724 Protein of unknown function DUF3297 NHAM_RS05590 b26cd1542e4506176dd51c2b9cafd293 483 Pfam PF06114 Domain of unknown function (DUF955) 196 319 1.8E-18 T 22-04-2016 IPR010359 HTH domain, IrrE-type NHAM_RS05590 b26cd1542e4506176dd51c2b9cafd293 483 PIRSF PIRSF019251 1 480 1.1E-184 T 22-04-2016 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 NHAM_RS05590 b26cd1542e4506176dd51c2b9cafd293 483 SUPERFAMILY SSF47413 10 75 1.85E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS05590 b26cd1542e4506176dd51c2b9cafd293 483 PANTHER PTHR10245 9 106 7.8E-17 T 22-04-2016 NHAM_RS05590 b26cd1542e4506176dd51c2b9cafd293 483 SMART SM00530 14 69 5.7E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS05590 b26cd1542e4506176dd51c2b9cafd293 483 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 320 475 7.4E-67 T 22-04-2016 IPR018653 Domain of unknown function DUF2083,transcriptional regulator NHAM_RS05590 b26cd1542e4506176dd51c2b9cafd293 483 Gene3D G3DSA:1.10.260.40 9 75 3.2E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS05590 b26cd1542e4506176dd51c2b9cafd293 483 Pfam PF01381 Helix-turn-helix 16 69 7.8E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS02790 7ddaa2634fd1782678c39b3b29244524 322 Pfam PF00589 Phage integrase family 159 305 3.8E-34 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS02790 7ddaa2634fd1782678c39b3b29244524 322 Gene3D G3DSA:1.10.443.10 137 315 6.3E-47 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS02790 7ddaa2634fd1782678c39b3b29244524 322 Gene3D G3DSA:1.10.150.130 22 112 3.7E-22 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS02790 7ddaa2634fd1782678c39b3b29244524 322 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 19 322 31.934 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD NHAM_RS02790 7ddaa2634fd1782678c39b3b29244524 322 PANTHER PTHR30349 17 322 1.0E-83 T 22-04-2016 NHAM_RS02790 7ddaa2634fd1782678c39b3b29244524 322 SUPERFAMILY SSF47823 25 112 8.04E-10 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal NHAM_RS02790 7ddaa2634fd1782678c39b3b29244524 322 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 25 111 2.4E-15 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 NHAM_RS02790 7ddaa2634fd1782678c39b3b29244524 322 PANTHER PTHR30349:SF5 17 322 1.0E-83 T 22-04-2016 NHAM_RS02790 7ddaa2634fd1782678c39b3b29244524 322 SUPERFAMILY SSF56349 130 320 8.24E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS13840 e200259324d1ca772c7f5c6c75c415b1 233 PANTHER PTHR30055:SF18 1 179 3.2E-34 T 22-04-2016 NHAM_RS13840 e200259324d1ca772c7f5c6c75c415b1 233 Gene3D G3DSA:1.10.357.10 11 205 2.2E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NHAM_RS13840 e200259324d1ca772c7f5c6c75c415b1 233 SUPERFAMILY SSF46689 4 69 7.48E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS13840 e200259324d1ca772c7f5c6c75c415b1 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS13840 e200259324d1ca772c7f5c6c75c415b1 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS13840 e200259324d1ca772c7f5c6c75c415b1 233 PANTHER PTHR30055 1 179 3.2E-34 T 22-04-2016 NHAM_RS13840 e200259324d1ca772c7f5c6c75c415b1 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 2.6E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS13840 e200259324d1ca772c7f5c6c75c415b1 233 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 903 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 ProSitePatterns PS00450 Aconitase family signature 1. 434 450 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 Gene3D G3DSA:3.30.499.10 22 258 3.0E-79 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 SUPERFAMILY SSF53732 4 632 1.83E-219 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 Gene3D G3DSA:3.20.19.10 645 903 1.6E-80 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 Pfam PF00694 Aconitase C-terminal domain 699 831 4.0E-42 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 Gene3D G3DSA:3.40.1060.10 259 377 2.8E-35 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 ProSitePatterns PS01244 Aconitase family signature 2. 500 513 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 SUPERFAMILY SSF52016 638 903 1.67E-89 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 Pfam PF00330 Aconitase family (aconitate hydratase) 75 569 1.4E-181 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PRINTS PR00415 Aconitase family signature 226 241 6.8E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PRINTS PR00415 Aconitase family signature 171 179 6.8E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PRINTS PR00415 Aconitase family signature 382 396 6.8E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PRINTS PR00415 Aconitase family signature 438 449 6.8E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PRINTS PR00415 Aconitase family signature 212 225 6.8E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PRINTS PR00415 Aconitase family signature 302 315 6.8E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PRINTS PR00415 Aconitase family signature 288 301 6.8E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PRINTS PR00415 Aconitase family signature 147 160 6.8E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PRINTS PR00415 Aconitase family signature 500 513 6.8E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 Gene3D G3DSA:3.30.499.10 379 582 4.4E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PANTHER PTHR11670:SF1 763 905 0.0 T 22-04-2016 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PANTHER PTHR11670:SF1 211 403 0.0 T 22-04-2016 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PANTHER PTHR11670:SF1 674 719 0.0 T 22-04-2016 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PANTHER PTHR11670:SF1 423 658 0.0 T 22-04-2016 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PANTHER PTHR11670:SF1 1 189 0.0 T 22-04-2016 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PANTHER PTHR11670 763 905 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PANTHER PTHR11670 211 403 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PANTHER PTHR11670 674 719 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PANTHER PTHR11670 423 658 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS02130 aa3524fcc5e4497430c552be9c3e56bd 905 PANTHER PTHR11670 1 189 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 218 295 4.6E-29 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 SUPERFAMILY SSF46767 215 295 7.19E-29 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 SMART SM00342 45 127 6.4E-12 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 Gene3D G3DSA:1.10.10.10 215 296 7.0E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 SUPERFAMILY SSF46689 28 79 1.2E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 SUPERFAMILY SSF53155 134 206 7.85E-16 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 PANTHER PTHR10815:SF5 103 295 3.9E-64 T 22-04-2016 NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 266 272 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 Pfam PF12833 Helix-turn-helix domain 51 128 6.3E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 Gene3D G3DSA:1.10.10.60 27 84 4.3E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 Gene3D G3DSA:3.30.160.70 121 209 4.0E-25 T 22-04-2016 NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 PANTHER PTHR10815 103 295 3.9E-64 T 22-04-2016 NHAM_RS00800 7e28ecb757954827737d695697b6bbce 302 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 216 294 2.2E-31 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NHAM_RS14165 95aaaed3b266f8a967eae0d2928fa78c 432 Pfam PF00534 Glycosyl transferases group 1 194 350 4.1E-17 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 NHAM_RS14165 95aaaed3b266f8a967eae0d2928fa78c 432 PANTHER PTHR12526 5 417 3.4E-37 T 22-04-2016 NHAM_RS14165 95aaaed3b266f8a967eae0d2928fa78c 432 SUPERFAMILY SSF53756 19 370 3.77E-51 T 22-04-2016 NHAM_RS14165 95aaaed3b266f8a967eae0d2928fa78c 432 Gene3D G3DSA:3.40.50.2000 188 348 2.0E-14 T 22-04-2016 NHAM_RS00300 131df6406076df54c6243c5e23d5acb0 314 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 228 239 1.7E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS00300 131df6406076df54c6243c5e23d5acb0 314 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 250 259 1.7E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS00300 131df6406076df54c6243c5e23d5acb0 314 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 128 142 1.7E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS00300 131df6406076df54c6243c5e23d5acb0 314 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 199 216 1.7E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS00300 131df6406076df54c6243c5e23d5acb0 314 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 162 180 1.7E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS00300 131df6406076df54c6243c5e23d5acb0 314 PANTHER PTHR22855 1 305 3.0E-142 T 22-04-2016 NHAM_RS00300 131df6406076df54c6243c5e23d5acb0 314 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 280 36.329 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS00300 131df6406076df54c6243c5e23d5acb0 314 PANTHER PTHR22855:SF17 1 305 3.0E-142 T 22-04-2016 NHAM_RS00300 131df6406076df54c6243c5e23d5acb0 314 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 3 282 6.7E-107 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS00300 131df6406076df54c6243c5e23d5acb0 314 SUPERFAMILY SSF52096 24 282 5.69E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS00300 131df6406076df54c6243c5e23d5acb0 314 Pfam PF01039 Carboxyl transferase domain 96 242 1.3E-18 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS00300 131df6406076df54c6243c5e23d5acb0 314 Gene3D G3DSA:3.90.226.10 17 283 6.0E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS15715 a2642b85b344d2557cdc0fc171b44192 227 Pfam PF03050 Transposase IS66 family 27 226 7.2E-61 T 22-04-2016 IPR004291 Transposase, IS66 NHAM_RS15715 a2642b85b344d2557cdc0fc171b44192 227 PANTHER PTHR33678:SF3 6 227 2.9E-82 T 22-04-2016 NHAM_RS15715 a2642b85b344d2557cdc0fc171b44192 227 PANTHER PTHR33678 6 227 2.9E-82 T 22-04-2016 NHAM_RS02855 30215c2708d138b0e5bc5b0ba4334125 851 Pfam PF02687 FtsX-like permease family 733 844 2.8E-8 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NHAM_RS02855 30215c2708d138b0e5bc5b0ba4334125 851 Pfam PF02687 FtsX-like permease family 272 386 2.3E-13 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NHAM_RS02855 30215c2708d138b0e5bc5b0ba4334125 851 PANTHER PTHR30287 7 851 1.1E-131 T 22-04-2016 NHAM_RS16605 0e4c878324e1683807694fb6170f91b2 175 Gene3D G3DSA:2.102.10.10 49 173 7.6E-39 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS16605 0e4c878324e1683807694fb6170f91b2 175 SUPERFAMILY SSF50022 31 172 8.9E-41 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS16605 0e4c878324e1683807694fb6170f91b2 175 Gene3D G3DSA:1.20.5.510 3 41 2.5E-19 T 22-04-2016 NHAM_RS16605 0e4c878324e1683807694fb6170f91b2 175 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 175 5.4E-72 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 NHAM_RS16605 0e4c878324e1683807694fb6170f91b2 175 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 3 41 1.2E-19 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 NHAM_RS16605 0e4c878324e1683807694fb6170f91b2 175 Pfam PF00355 Rieske [2Fe-2S] domain 105 162 2.4E-12 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS16605 0e4c878324e1683807694fb6170f91b2 175 PANTHER PTHR10134 10 175 1.3E-73 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 NHAM_RS16605 0e4c878324e1683807694fb6170f91b2 175 PRINTS PR00162 Rieske 2Fe-2S subunit signature 135 147 1.3E-16 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NHAM_RS16605 0e4c878324e1683807694fb6170f91b2 175 PRINTS PR00162 Rieske 2Fe-2S subunit signature 147 159 1.3E-16 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NHAM_RS16605 0e4c878324e1683807694fb6170f91b2 175 PRINTS PR00162 Rieske 2Fe-2S subunit signature 113 124 1.3E-16 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NHAM_RS04330 ff8c6afcb2c093cc552499137cca9fc6 1436 PANTHER PTHR15535:SF1 426 651 1.0E-29 T 22-04-2016 NHAM_RS04330 ff8c6afcb2c093cc552499137cca9fc6 1436 PANTHER PTHR15535 426 651 1.0E-29 T 22-04-2016 NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 SUPERFAMILY SSF52540 297 517 9.28E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 PANTHER PTHR19211 1 550 0.0 T 22-04-2016 NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 4 548 8.7E-290 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 Pfam PF00005 ABC transporter 23 186 7.3E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 Pfam PF00005 ABC transporter 335 468 4.8E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 Gene3D G3DSA:3.40.50.300 317 529 2.8E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 SUPERFAMILY SSF52540 9 239 1.38E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 Pfam PF12848 ABC transporter 225 298 4.7E-12 T 22-04-2016 IPR032781 ABC-transporter extension domain NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 SMART SM00382 343 519 1.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 SMART SM00382 32 227 1.0E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 PANTHER PTHR19211:SF7 1 550 0.0 T 22-04-2016 NHAM_RS14935 8c50e224ca432cc9d2fefcfb26c02b6a 550 Gene3D G3DSA:3.40.50.300 9 283 9.6E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02080 d0b13c832a166c8378c3d2bab5ddf94a 70 SUPERFAMILY SSF50249 3 68 1.91E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS02080 d0b13c832a166c8378c3d2bab5ddf94a 70 Pfam PF00313 'Cold-shock' DNA-binding domain 4 67 8.5E-24 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS02080 d0b13c832a166c8378c3d2bab5ddf94a 70 SMART SM00357 3 69 8.8E-27 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS02080 d0b13c832a166c8378c3d2bab5ddf94a 70 PRINTS PR00050 Cold shock protein signature 4 19 2.9E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS02080 d0b13c832a166c8378c3d2bab5ddf94a 70 PRINTS PR00050 Cold shock protein signature 25 34 2.9E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS02080 d0b13c832a166c8378c3d2bab5ddf94a 70 PRINTS PR00050 Cold shock protein signature 40 58 2.9E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS02080 d0b13c832a166c8378c3d2bab5ddf94a 70 PIRSF PIRSF002599 1 69 1.8E-20 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 NHAM_RS02080 d0b13c832a166c8378c3d2bab5ddf94a 70 PANTHER PTHR11544 4 57 4.1E-21 T 22-04-2016 NHAM_RS02080 d0b13c832a166c8378c3d2bab5ddf94a 70 Gene3D G3DSA:2.40.50.140 3 66 2.0E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS02080 d0b13c832a166c8378c3d2bab5ddf94a 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site NHAM_RS04435 eedfbd69693b931f04a681bb8d46b385 129 Gene3D G3DSA:1.10.10.60 22 102 8.7E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS04435 eedfbd69693b931f04a681bb8d46b385 129 Pfam PF01527 Transposase 18 88 4.9E-7 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NHAM_RS04435 eedfbd69693b931f04a681bb8d46b385 129 SUPERFAMILY SSF46689 17 103 2.15E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 PANTHER PTHR11922 6 537 1.2E-278 T 22-04-2016 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 SUPERFAMILY SSF52317 21 247 7.34E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 Pfam PF00958 GMP synthase C terminal domain 448 539 3.2E-42 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 PRINTS PR00096 Glutamine amidotransferase superfamily signature 96 107 1.4E-7 T 22-04-2016 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 PRINTS PR00096 Glutamine amidotransferase superfamily signature 69 78 1.4E-7 T 22-04-2016 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 PRINTS PR00096 Glutamine amidotransferase superfamily signature 187 200 1.4E-7 T 22-04-2016 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 Pfam PF02540 NAD synthase 229 270 1.0E-5 T 22-04-2016 IPR022310 NAD/GMP synthase NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 SUPERFAMILY SSF54810 420 540 1.44E-50 T 22-04-2016 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 22 540 53.578 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 Gene3D G3DSA:3.30.300.10 416 540 1.6E-51 T 22-04-2016 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 PRINTS PR00097 Anthranilate synthase component II signature 187 200 5.8E-6 T 22-04-2016 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 PRINTS PR00097 Anthranilate synthase component II signature 96 107 5.8E-6 T 22-04-2016 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 PRINTS PR00097 Anthranilate synthase component II signature 69 78 5.8E-6 T 22-04-2016 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 Pfam PF00117 Glutamine amidotransferase class-I 27 210 8.9E-37 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 PANTHER PTHR11922:SF2 6 537 1.2E-278 T 22-04-2016 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 SUPERFAMILY SSF52402 207 433 1.23E-58 T 22-04-2016 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 Gene3D G3DSA:3.40.50.620 233 410 7.6E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 25 213 9.9E-70 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 223 540 6.8E-142 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 NHAM_RS13000 3b495d6b484a9cb62ff9a6faaeb73fec 540 Gene3D G3DSA:3.40.50.880 21 232 1.7E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS19865 47cb7b3800d30bc68fbd99a8608a8b0f 225 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 143 206 6.4E-15 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 NHAM_RS19865 47cb7b3800d30bc68fbd99a8608a8b0f 225 Gene3D G3DSA:3.30.2090.10 25 108 2.2E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS19865 47cb7b3800d30bc68fbd99a8608a8b0f 225 SUPERFAMILY SSF82714 25 109 3.14E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS19865 47cb7b3800d30bc68fbd99a8608a8b0f 225 Pfam PF00873 AcrB/AcrD/AcrF family 23 114 1.2E-18 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS19865 47cb7b3800d30bc68fbd99a8608a8b0f 225 PANTHER PTHR32063 25 118 1.1E-35 T 22-04-2016 NHAM_RS19865 47cb7b3800d30bc68fbd99a8608a8b0f 225 PANTHER PTHR32063:SF27 25 118 1.1E-35 T 22-04-2016 NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 Gene3D G3DSA:3.40.1660.10 247 309 5.9E-75 T 22-04-2016 NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 Gene3D G3DSA:3.40.1660.10 519 664 5.9E-75 T 22-04-2016 NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 18 224 5.3E-64 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 SUPERFAMILY SSF159501 252 664 9.42E-135 T 22-04-2016 NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 18 227 39.404 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 PANTHER PTHR31299:SF0 253 680 2.0E-171 T 22-04-2016 NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 Gene3D G3DSA:3.30.1870.10 311 387 7.4E-28 T 22-04-2016 NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 22 223 3.9E-59 T 22-04-2016 NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 PANTHER PTHR31299 253 680 2.0E-171 T 22-04-2016 NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 Gene3D G3DSA:3.40.50.150 24 227 6.5E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 SUPERFAMILY SSF53335 16 223 8.52E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 Pfam PF05139 Erythromycin esterase 310 658 6.4E-118 T 22-04-2016 IPR007815 Erythromycin esterase GO:0046677 NHAM_RS09845 4929db1013b71882f8a102b51de344f8 680 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 146 161 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NHAM_RS09880 9c41b7fd3e6732ac20b823a00f9295dd 430 TIGRFAM TIGR00937 2A51: chromate efflux transporter 48 424 4.7E-97 T 22-04-2016 IPR014047 Chromate transporter, long chain NHAM_RS09880 9c41b7fd3e6732ac20b823a00f9295dd 430 Pfam PF02417 Chromate transporter 43 207 6.9E-33 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 NHAM_RS09880 9c41b7fd3e6732ac20b823a00f9295dd 430 Pfam PF02417 Chromate transporter 258 424 1.8E-35 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 NHAM_RS09880 9c41b7fd3e6732ac20b823a00f9295dd 430 PIRSF PIRSF004810 24 430 5.2E-121 T 22-04-2016 IPR014047 Chromate transporter, long chain NHAM_RS09880 9c41b7fd3e6732ac20b823a00f9295dd 430 PANTHER PTHR33567:SF3 12 427 3.5E-122 T 22-04-2016 NHAM_RS09880 9c41b7fd3e6732ac20b823a00f9295dd 430 PANTHER PTHR33567 12 427 3.5E-122 T 22-04-2016 NHAM_RS19915 a02a6824b3c6a92ea79106269d615769 442 Pfam PF08388 Group II intron, maturase-specific domain 341 410 4.1E-12 T 22-04-2016 IPR013597 Group II intron, maturase-specific NHAM_RS19915 a02a6824b3c6a92ea79106269d615769 442 PANTHER PTHR19446:SF383 29 356 7.8E-63 T 22-04-2016 NHAM_RS19915 a02a6824b3c6a92ea79106269d615769 442 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 41 405 2.0E-104 T 22-04-2016 IPR030931 Group II intron reverse transcriptase/maturase NHAM_RS19915 a02a6824b3c6a92ea79106269d615769 442 SUPERFAMILY SSF56672 51 409 3.02E-44 T 22-04-2016 NHAM_RS19915 a02a6824b3c6a92ea79106269d615769 442 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 98 318 1.5E-38 T 22-04-2016 IPR000477 Reverse transcriptase domain NHAM_RS19915 a02a6824b3c6a92ea79106269d615769 442 PANTHER PTHR19446 29 356 7.8E-63 T 22-04-2016 NHAM_RS19915 a02a6824b3c6a92ea79106269d615769 442 Gene3D G3DSA:3.30.70.270 227 318 4.3E-4 T 22-04-2016 NHAM_RS19545 8b34e07da267fa25f4d9fb32dd93cfd4 233 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 76 89 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NHAM_RS19545 8b34e07da267fa25f4d9fb32dd93cfd4 233 PANTHER PTHR11384:SF3 1 211 2.5E-63 T 22-04-2016 NHAM_RS19545 8b34e07da267fa25f4d9fb32dd93cfd4 233 Gene3D G3DSA:3.40.50.300 45 212 4.5E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19545 8b34e07da267fa25f4d9fb32dd93cfd4 233 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS19545 8b34e07da267fa25f4d9fb32dd93cfd4 233 PANTHER PTHR11384 1 211 2.5E-63 T 22-04-2016 NHAM_RS19545 8b34e07da267fa25f4d9fb32dd93cfd4 233 SUPERFAMILY SSF52540 42 213 1.0E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19545 8b34e07da267fa25f4d9fb32dd93cfd4 233 Pfam PF00005 ABC transporter 68 196 8.1E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS19545 8b34e07da267fa25f4d9fb32dd93cfd4 233 SMART SM00382 72 232 5.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS14215 c4bf3275760c7ad358e51fa013092aa8 410 PANTHER PTHR12526:SF399 8 98 4.2E-38 T 22-04-2016 NHAM_RS14215 c4bf3275760c7ad358e51fa013092aa8 410 SUPERFAMILY SSF53756 16 408 7.33E-46 T 22-04-2016 NHAM_RS14215 c4bf3275760c7ad358e51fa013092aa8 410 Gene3D G3DSA:3.40.50.2000 233 372 1.8E-16 T 22-04-2016 NHAM_RS14215 c4bf3275760c7ad358e51fa013092aa8 410 PANTHER PTHR12526 8 98 4.2E-38 T 22-04-2016 NHAM_RS14215 c4bf3275760c7ad358e51fa013092aa8 410 PANTHER PTHR12526:SF399 121 409 4.2E-38 T 22-04-2016 NHAM_RS14215 c4bf3275760c7ad358e51fa013092aa8 410 Pfam PF00534 Glycosyl transferases group 1 233 348 2.0E-19 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 NHAM_RS14215 c4bf3275760c7ad358e51fa013092aa8 410 PANTHER PTHR12526 121 409 4.2E-38 T 22-04-2016 NHAM_RS05165 6c9700d9b7ccd95805419721be34ca22 390 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 15 389 3.2E-13 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 NHAM_RS05165 6c9700d9b7ccd95805419721be34ca22 390 Gene3D G3DSA:2.40.128.130 107 390 2.2E-41 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS05165 6c9700d9b7ccd95805419721be34ca22 390 SMART SM00869 116 378 6.9E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS05165 6c9700d9b7ccd95805419721be34ca22 390 Pfam PF03797 Autotransporter beta-domain 116 371 4.3E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS05165 6c9700d9b7ccd95805419721be34ca22 390 SUPERFAMILY SSF103515 39 48 2.62E-44 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS05165 6c9700d9b7ccd95805419721be34ca22 390 SUPERFAMILY SSF103515 112 390 2.62E-44 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS10785 e5d3a434caaa6e6f5291b6b5a4552383 273 Pfam PF03741 Integral membrane protein TerC family 36 204 1.0E-34 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 NHAM_RS10785 e5d3a434caaa6e6f5291b6b5a4552383 273 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 33 206 5.7E-59 T 22-04-2016 IPR022301 Integral membrane protein YjbE NHAM_RS03520 8f38461b50ddccd7dfca4f675b702ffe 222 SUPERFAMILY SSF53335 28 210 5.47E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS03520 8f38461b50ddccd7dfca4f675b702ffe 222 PANTHER PTHR10108 27 207 1.2E-92 T 22-04-2016 NHAM_RS03520 8f38461b50ddccd7dfca4f675b702ffe 222 PANTHER PTHR10108:SF831 27 207 1.2E-92 T 22-04-2016 NHAM_RS03520 8f38461b50ddccd7dfca4f675b702ffe 222 Gene3D G3DSA:3.40.50.150 28 197 1.8E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS03520 8f38461b50ddccd7dfca4f675b702ffe 222 Pfam PF07021 Methionine biosynthesis protein MetW 22 215 1.0E-91 T 22-04-2016 IPR010743 Methionine biosynthesis MetW NHAM_RS03520 8f38461b50ddccd7dfca4f675b702ffe 222 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 23 215 7.6E-77 T 22-04-2016 IPR010743 Methionine biosynthesis MetW NHAM_RS23465 8a439059d3830d04e478d6273c5273aa 111 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 110 3.3E-23 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 NHAM_RS23465 8a439059d3830d04e478d6273c5273aa 111 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 2 109 2.5E-27 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 NHAM_RS23465 8a439059d3830d04e478d6273c5273aa 111 Gene3D G3DSA:3.40.50.300 2 111 2.6E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS23465 8a439059d3830d04e478d6273c5273aa 111 PANTHER PTHR33540 1 111 2.4E-31 T 22-04-2016 NHAM_RS23465 8a439059d3830d04e478d6273c5273aa 111 SUPERFAMILY SSF52540 6 104 9.2E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10560 99d3b371dc3e5e8522609a77f70deb82 253 PANTHER PTHR10859 12 238 5.7E-75 T 22-04-2016 NHAM_RS10560 99d3b371dc3e5e8522609a77f70deb82 253 PANTHER PTHR10859:SF49 12 238 5.7E-75 T 22-04-2016 NHAM_RS10560 99d3b371dc3e5e8522609a77f70deb82 253 Pfam PF00535 Glycosyl transferase family 2 15 176 8.4E-29 T 22-04-2016 IPR001173 Glycosyltransferase 2-like NHAM_RS10560 99d3b371dc3e5e8522609a77f70deb82 253 SUPERFAMILY SSF53448 9 236 1.07E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS10560 99d3b371dc3e5e8522609a77f70deb82 253 Gene3D G3DSA:3.90.550.10 11 183 2.7E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 PANTHER PTHR11956:SF6 7 312 9.5E-188 T 22-04-2016 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 PANTHER PTHR11956:SF6 328 596 9.5E-188 T 22-04-2016 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 Gene3D G3DSA:3.30.1360.70 15 119 2.5E-30 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 140 149 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 PRINTS PR01038 Arginyl-tRNA synthetase signature 130 145 4.0E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 PRINTS PR01038 Arginyl-tRNA synthetase signature 330 351 4.0E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 PRINTS PR01038 Arginyl-tRNA synthetase signature 169 182 4.0E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 PRINTS PR01038 Arginyl-tRNA synthetase signature 145 161 4.0E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 Gene3D G3DSA:3.40.50.620 124 466 3.8E-95 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 PANTHER PTHR11956 7 312 9.5E-188 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 PANTHER PTHR11956 328 596 9.5E-188 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 SMART SM00836 461 596 1.2E-52 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 Pfam PF05746 DALR anticodon binding domain 461 596 1.1E-30 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 Hamap MF_00123 Arginine--tRNA ligase [argS]. 16 596 23.942 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 Pfam PF00750 tRNA synthetases class I (R) 319 434 2.2E-6 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 Pfam PF00750 tRNA synthetases class I (R) 118 187 7.9E-12 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 SUPERFAMILY SSF47323 455 596 1.7E-31 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 26 101 4.2E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 36 596 2.2E-106 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 SUPERFAMILY SSF52374 125 472 4.79E-81 T 22-04-2016 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 SMART SM01016 12 101 6.3E-35 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 SUPERFAMILY SSF55190 7 121 4.97E-26 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 NHAM_RS08985 7375b6c21f1dd057c8f895756a5368b7 597 Gene3D G3DSA:1.10.730.10 467 596 2.0E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS17295 035acefb85250e13d1aa4b5e5d84a0ae 139 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 134 5.9E-22 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 NHAM_RS17295 035acefb85250e13d1aa4b5e5d84a0ae 139 Pfam PF02050 Flagellar FliJ protein 14 132 9.8E-10 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 NHAM_RS01255 c7aa75b4f62255d1cbb5939dc0e2948b 162 PANTHER PTHR33164 8 157 3.3E-34 T 22-04-2016 NHAM_RS01255 c7aa75b4f62255d1cbb5939dc0e2948b 162 PANTHER PTHR33164:SF4 8 157 3.3E-34 T 22-04-2016 NHAM_RS01255 c7aa75b4f62255d1cbb5939dc0e2948b 162 Gene3D G3DSA:1.10.10.10 7 144 3.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS01255 c7aa75b4f62255d1cbb5939dc0e2948b 162 SMART SM00347 29 133 0.0025 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS01255 c7aa75b4f62255d1cbb5939dc0e2948b 162 SUPERFAMILY SSF46785 10 143 1.73E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS01255 c7aa75b4f62255d1cbb5939dc0e2948b 162 Pfam PF12802 MarR family 35 96 7.3E-11 T 22-04-2016 NHAM_RS07995 9bab1ddde51d93c4bc8b516df4704570 190 Pfam PF00333 Ribosomal protein S5, N-terminal domain 23 85 5.1E-28 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS07995 9bab1ddde51d93c4bc8b516df4704570 190 PANTHER PTHR13718 21 173 5.8E-68 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07995 9bab1ddde51d93c4bc8b516df4704570 190 SUPERFAMILY SSF54768 19 86 1.36E-22 T 22-04-2016 NHAM_RS07995 9bab1ddde51d93c4bc8b516df4704570 190 Pfam PF03719 Ribosomal protein S5, C-terminal domain 99 169 2.8E-29 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 NHAM_RS07995 9bab1ddde51d93c4bc8b516df4704570 190 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 175 34.93 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 NHAM_RS07995 9bab1ddde51d93c4bc8b516df4704570 190 SUPERFAMILY SSF54211 91 170 3.29E-25 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS07995 9bab1ddde51d93c4bc8b516df4704570 190 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 20 174 2.5E-64 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 NHAM_RS07995 9bab1ddde51d93c4bc8b516df4704570 190 Gene3D G3DSA:3.30.230.10 88 170 2.2E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS07995 9bab1ddde51d93c4bc8b516df4704570 190 ProSitePatterns PS00585 Ribosomal protein S5 signature. 39 71 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site NHAM_RS07995 9bab1ddde51d93c4bc8b516df4704570 190 Gene3D G3DSA:3.30.160.20 20 83 4.4E-30 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain NHAM_RS05040 ad333dced7d9a6877fed82157af507b2 292 Pfam PF01040 UbiA prenyltransferase family 29 236 2.8E-16 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 SUPERFAMILY SSF50494 40 263 2.98E-61 T 22-04-2016 IPR009003 Peptidase S1, PA clan NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 Gene3D G3DSA:2.30.42.10 270 367 3.2E-26 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 SMART SM00228 393 459 3.6E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 SMART SM00228 269 351 7.5E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 PANTHER PTHR22939 25 466 2.7E-141 T 22-04-2016 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 SUPERFAMILY SSF50156 378 466 6.57E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 Pfam PF13365 Trypsin-like peptidase domain 93 229 2.0E-32 T 22-04-2016 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 465 9.8E-144 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 Gene3D G3DSA:2.40.10.10 41 154 1.7E-34 T 22-04-2016 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 PANTHER PTHR22939:SF93 25 466 2.7E-141 T 22-04-2016 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 Gene3D G3DSA:2.30.42.10 378 464 4.8E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 Pfam PF13180 PDZ domain 269 360 8.0E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 Pfam PF13180 PDZ domain 400 461 6.8E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 Gene3D G3DSA:2.40.10.10 157 269 6.2E-41 T 22-04-2016 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 4.7E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 4.7E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 4.7E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 4.7E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 4.7E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 PRINTS PR00834 HtrA/DegQ protease family signature 309 321 4.7E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS08045 3dc0a086afe41af65f79148973648139 468 SUPERFAMILY SSF50156 268 363 8.02E-22 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS00175 a77be5edf0b1ccd390b0a4d70c7c81d8 301 Gene3D G3DSA:3.40.190.10 177 272 9.2E-26 T 22-04-2016 NHAM_RS00175 a77be5edf0b1ccd390b0a4d70c7c81d8 301 Pfam PF03466 LysR substrate binding domain 88 295 4.0E-41 T 22-04-2016 IPR005119 LysR, substrate-binding NHAM_RS00175 a77be5edf0b1ccd390b0a4d70c7c81d8 301 Gene3D G3DSA:3.40.190.10 91 176 3.2E-17 T 22-04-2016 NHAM_RS00175 a77be5edf0b1ccd390b0a4d70c7c81d8 301 PANTHER PTHR30346 2 296 1.5E-94 T 22-04-2016 NHAM_RS00175 a77be5edf0b1ccd390b0a4d70c7c81d8 301 SUPERFAMILY SSF46785 2 111 1.36E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS00175 a77be5edf0b1ccd390b0a4d70c7c81d8 301 SUPERFAMILY SSF53850 89 298 9.77E-36 T 22-04-2016 NHAM_RS00175 a77be5edf0b1ccd390b0a4d70c7c81d8 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.2E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS00175 a77be5edf0b1ccd390b0a4d70c7c81d8 301 PANTHER PTHR30346:SF15 2 296 1.5E-94 T 22-04-2016 NHAM_RS00175 a77be5edf0b1ccd390b0a4d70c7c81d8 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS00175 a77be5edf0b1ccd390b0a4d70c7c81d8 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS00175 a77be5edf0b1ccd390b0a4d70c7c81d8 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS00175 a77be5edf0b1ccd390b0a4d70c7c81d8 301 Gene3D G3DSA:1.10.10.10 1 79 7.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 PANTHER PTHR10887 551 794 6.6E-28 T 22-04-2016 NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 PANTHER PTHR10887 985 1060 6.6E-28 T 22-04-2016 NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 PANTHER PTHR10887 847 875 6.6E-28 T 22-04-2016 NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 SUPERFAMILY SSF52540 421 704 7.81E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 Pfam PF13604 AAA domain 550 731 2.1E-30 T 22-04-2016 NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 Gene3D G3DSA:3.40.50.300 548 729 1.8E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 SUPERFAMILY SSF52540 848 1038 1.86E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 SUPERFAMILY SSF52540 674 741 1.86E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 Pfam PF13538 UvrD-like helicase C-terminal domain 985 1030 2.7E-14 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 PANTHER PTHR10887:SF284 551 794 6.6E-28 T 22-04-2016 NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 PANTHER PTHR10887:SF284 985 1060 6.6E-28 T 22-04-2016 NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 PANTHER PTHR10887:SF284 847 875 6.6E-28 T 22-04-2016 NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 SMART SM00382 558 703 6.6E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS19020 81f1c338694ba7d2260b1c92bb11af90 1199 Gene3D G3DSA:3.40.50.300 977 1041 7.7E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 Gene3D G3DSA:2.30.30.30 5 64 4.2E-18 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 186 3.4E-63 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 3.9E-18 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 PIRSF PIRSF005901 2 187 1.7E-59 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 SUPERFAMILY SSF50104 5 64 2.11E-13 T 22-04-2016 IPR008991 Translation protein SH3-like domain NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 122 3.4E-19 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 PANTHER PTHR30053:SF1 2 187 2.2E-76 T 22-04-2016 NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 SMART SM00841 130 185 2.8E-25 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 Gene3D G3DSA:2.40.50.140 66 128 3.4E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 SUPERFAMILY SSF50249 66 127 2.7E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 43.462 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 2.9E-20 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 SMART SM01185 68 122 1.9E-21 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 Gene3D G3DSA:2.40.50.140 130 186 1.5E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 PANTHER PTHR30053 2 187 2.2E-76 T 22-04-2016 NHAM_RS11730 e422080369b02aec7c56f5994e359d96 188 SUPERFAMILY SSF50249 130 186 3.08E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS23820 298de26e7d7e84e84add442464a51ec0 660 Pfam PF16793 RepB DNA-primase from phage plasmid 81 202 7.9E-14 T 22-04-2016 NHAM_RS23820 298de26e7d7e84e84add442464a51ec0 660 Pfam PF13481 AAA domain 321 501 2.0E-34 T 22-04-2016 NHAM_RS23820 298de26e7d7e84e84add442464a51ec0 660 SUPERFAMILY SSF52540 342 503 5.85E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS23820 298de26e7d7e84e84add442464a51ec0 660 Gene3D G3DSA:3.40.50.300 327 567 8.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08060 e71027b8cf18ac26b89289fbab9b193e 411 Pfam PF00849 RNA pseudouridylate synthase 180 334 8.2E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS08060 e71027b8cf18ac26b89289fbab9b193e 411 Gene3D G3DSA:3.10.290.10 96 145 3.3E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS08060 e71027b8cf18ac26b89289fbab9b193e 411 SUPERFAMILY SSF55120 170 402 1.5E-58 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS08060 e71027b8cf18ac26b89289fbab9b193e 411 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 220 234 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS08060 e71027b8cf18ac26b89289fbab9b193e 411 PANTHER PTHR11079:SF60 173 406 9.0E-83 T 22-04-2016 NHAM_RS08060 e71027b8cf18ac26b89289fbab9b193e 411 PANTHER PTHR11079:SF60 91 152 9.0E-83 T 22-04-2016 NHAM_RS08060 e71027b8cf18ac26b89289fbab9b193e 411 PANTHER PTHR11079 173 406 9.0E-83 T 22-04-2016 NHAM_RS08060 e71027b8cf18ac26b89289fbab9b193e 411 PANTHER PTHR11079 91 152 9.0E-83 T 22-04-2016 NHAM_RS08060 e71027b8cf18ac26b89289fbab9b193e 411 Pfam PF01479 S4 domain 97 143 2.2E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS08060 e71027b8cf18ac26b89289fbab9b193e 411 SMART SM00363 97 158 5.8E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS08060 e71027b8cf18ac26b89289fbab9b193e 411 SUPERFAMILY SSF55174 96 147 4.56E-8 T 22-04-2016 NHAM_RS08060 e71027b8cf18ac26b89289fbab9b193e 411 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 94 390 1.8E-62 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS20635 a32941a542f79c51cfb228083bb083fa 101 SMART SM00530 11 66 1.9E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS20635 a32941a542f79c51cfb228083bb083fa 101 PANTHER PTHR36924 1 88 4.3E-32 T 22-04-2016 NHAM_RS20635 a32941a542f79c51cfb228083bb083fa 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 79 5.7E-29 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 NHAM_RS20635 a32941a542f79c51cfb228083bb083fa 101 SUPERFAMILY SSF47413 7 88 1.52E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS20635 a32941a542f79c51cfb228083bb083fa 101 Gene3D G3DSA:1.10.260.40 3 80 1.2E-32 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS20635 a32941a542f79c51cfb228083bb083fa 101 PANTHER PTHR36924:SF1 1 88 4.3E-32 T 22-04-2016 NHAM_RS20635 a32941a542f79c51cfb228083bb083fa 101 Pfam PF01381 Helix-turn-helix 14 55 2.5E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS02750 1a557606bd47111c30da429aab1cda62 135 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 121 18.801 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02750 1a557606bd47111c30da429aab1cda62 135 SUPERFAMILY SSF51344 3 82 2.22E-22 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02750 1a557606bd47111c30da429aab1cda62 135 PANTHER PTHR13822 1 115 3.2E-32 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02750 1a557606bd47111c30da429aab1cda62 135 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 3.1E-25 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02750 1a557606bd47111c30da429aab1cda62 135 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 88 8.0E-32 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02750 1a557606bd47111c30da429aab1cda62 135 Gene3D G3DSA:2.60.15.10 3 89 2.2E-28 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS02750 1a557606bd47111c30da429aab1cda62 135 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 130 5.3E-29 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 Gene3D G3DSA:3.30.70.20 201 240 5.9E-23 T 22-04-2016 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 PANTHER PTHR11938 1 31 1.3E-95 T 22-04-2016 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 PANTHER PTHR11938 136 145 1.3E-95 T 22-04-2016 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 PANTHER PTHR11938 175 293 1.3E-95 T 22-04-2016 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 482 2.1E-194 T 22-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 Pfam PF13247 4Fe-4S dicluster domain 181 275 7.5E-37 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 PANTHER PTHR11938:SF8 1 31 1.3E-95 T 22-04-2016 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 PANTHER PTHR11938:SF8 136 145 1.3E-95 T 22-04-2016 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 PANTHER PTHR11938:SF8 175 293 1.3E-95 T 22-04-2016 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 Gene3D G3DSA:3.30.70.20 241 362 8.1E-63 T 22-04-2016 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 Gene3D G3DSA:3.30.70.20 450 479 8.1E-63 T 22-04-2016 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 362 441 1.9E-19 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 SUPERFAMILY SSF54862 1 484 7.85E-139 T 22-04-2016 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 Gene3D G3DSA:3.30.70.20 169 200 4.4E-11 T 22-04-2016 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 Gene3D G3DSA:3.30.70.20 10 26 4.4E-11 T 22-04-2016 NHAM_RS17685 d4af3e710385ed0f16b7d9f173cf12a2 513 Gene3D G3DSA:1.10.3650.10 363 443 2.4E-22 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 NHAM_RS11790 5ab014fb46ce5cce97b70f66f1f54f6c 332 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 19 326 52.947 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS11790 5ab014fb46ce5cce97b70f66f1f54f6c 332 SMART SM00859 22 126 2.3E-20 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NHAM_RS11790 5ab014fb46ce5cce97b70f66f1f54f6c 332 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 27 123 1.9E-9 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NHAM_RS11790 5ab014fb46ce5cce97b70f66f1f54f6c 332 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 21 326 1.1E-124 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS11790 5ab014fb46ce5cce97b70f66f1f54f6c 332 SUPERFAMILY SSF55347 137 307 1.96E-38 T 22-04-2016 NHAM_RS11790 5ab014fb46ce5cce97b70f66f1f54f6c 332 SUPERFAMILY SSF51735 22 159 4.54E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11790 5ab014fb46ce5cce97b70f66f1f54f6c 332 PANTHER PTHR32338 9 326 3.1E-119 T 22-04-2016 NHAM_RS11790 5ab014fb46ce5cce97b70f66f1f54f6c 332 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 132 148 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS11790 5ab014fb46ce5cce97b70f66f1f54f6c 332 Gene3D G3DSA:3.40.50.720 61 145 1.2E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11790 5ab014fb46ce5cce97b70f66f1f54f6c 332 PANTHER PTHR32338:SF9 9 326 3.1E-119 T 22-04-2016 NHAM_RS11790 5ab014fb46ce5cce97b70f66f1f54f6c 332 Gene3D G3DSA:3.30.360.10 146 307 3.0E-41 T 22-04-2016 NHAM_RS13280 082454a545ca1d8bd46a07a4f5209cd5 149 SUPERFAMILY SSF54593 12 128 8.19E-29 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS13280 082454a545ca1d8bd46a07a4f5209cd5 149 Gene3D G3DSA:3.10.180.10 17 145 1.0E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS13280 082454a545ca1d8bd46a07a4f5209cd5 149 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 124 3.1E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NHAM_RS13280 082454a545ca1d8bd46a07a4f5209cd5 149 PANTHER PTHR34109 13 140 2.2E-33 T 22-04-2016 NHAM_RS13280 082454a545ca1d8bd46a07a4f5209cd5 149 PANTHER PTHR34109:SF1 13 140 2.2E-33 T 22-04-2016 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SUPERFAMILY SSF52172 822 939 1.29E-29 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Gene3D G3DSA:3.30.450.20 163 295 5.1E-25 T 22-04-2016 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SMART SM00448 823 935 3.8E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Gene3D G3DSA:3.30.450.20 57 162 9.1E-5 T 22-04-2016 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SMART SM00091 304 370 8.0E-6 T 22-04-2016 IPR000014 PAS domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SMART SM00091 441 507 1.2E-5 T 22-04-2016 IPR000014 PAS domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 PANTHER PTHR24423:SF438 248 941 7.1E-205 T 22-04-2016 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Gene3D G3DSA:3.30.565.10 640 800 3.7E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Pfam PF00512 His Kinase A (phospho-acceptor) domain 572 637 4.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SMART SM00387 680 802 1.9E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Gene3D G3DSA:3.40.50.2300 821 939 1.2E-33 T 22-04-2016 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Pfam PF08447 PAS fold 329 412 1.6E-23 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Pfam PF08447 PAS fold 465 534 1.3E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Pfam PF08447 PAS fold 200 285 1.0E-16 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 PANTHER PTHR24423 248 941 7.1E-205 T 22-04-2016 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Gene3D G3DSA:1.10.287.130 564 635 1.3E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SUPERFAMILY SSF55874 630 800 2.88E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SUPERFAMILY SSF55785 48 159 2.66E-5 T 22-04-2016 IPR000014 PAS domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SMART SM00388 571 639 8.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SUPERFAMILY SSF55785 446 551 1.94E-22 T 22-04-2016 IPR000014 PAS domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SUPERFAMILY SSF55785 289 415 4.99E-29 T 22-04-2016 IPR000014 PAS domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 300 420 1.0E-14 T 22-04-2016 IPR000014 PAS domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 441 556 8.3E-18 T 22-04-2016 IPR000014 PAS domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 200 298 3.0E-6 T 22-04-2016 IPR000014 PAS domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SUPERFAMILY SSF47384 563 636 3.92E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Gene3D G3DSA:3.30.450.20 296 415 7.7E-35 T 22-04-2016 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SUPERFAMILY SSF55785 194 295 7.33E-16 T 22-04-2016 IPR000014 PAS domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SMART SM00086 376 418 3.2E-9 T 22-04-2016 IPR001610 PAC motif NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SMART SM00086 250 292 0.0036 T 22-04-2016 IPR001610 PAC motif NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 SMART SM00086 513 549 0.0029 T 22-04-2016 IPR001610 PAC motif NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 762 780 5.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 749 759 5.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 731 745 5.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 786 799 5.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Gene3D G3DSA:3.30.450.20 434 547 7.1E-23 T 22-04-2016 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Pfam PF00072 Response regulator receiver domain 825 935 5.2E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 681 800 9.3E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01190 e1f5a124d7d4a1567899f55cf0dc1cc8 941 Pfam PF13426 PAS domain 63 159 0.83 T 22-04-2016 IPR000014 PAS domain NHAM_RS11500 2d5b95dc19444f50b1600621c21a5406 206 PANTHER PTHR35458 3 202 3.7E-111 T 22-04-2016 NHAM_RS11500 2d5b95dc19444f50b1600621c21a5406 206 Pfam PF01936 NYN domain 7 164 1.5E-39 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type NHAM_RS11500 2d5b95dc19444f50b1600621c21a5406 206 PANTHER PTHR35458:SF1 3 202 3.7E-111 T 22-04-2016 NHAM_RS11500 2d5b95dc19444f50b1600621c21a5406 206 Gene3D G3DSA:3.40.50.1010 3 167 3.1E-49 T 22-04-2016 IPR029060 PIN domain-like NHAM_RS12355 7f1941e33c12b92c00d3acf49739a48a 586 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 80 91 7.6E-13 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NHAM_RS12355 7f1941e33c12b92c00d3acf49739a48a 586 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 133 150 7.6E-13 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NHAM_RS12355 7f1941e33c12b92c00d3acf49739a48a 586 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 160 173 7.6E-13 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NHAM_RS12355 7f1941e33c12b92c00d3acf49739a48a 586 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 57 272 3.9E-52 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 NHAM_RS12355 7f1941e33c12b92c00d3acf49739a48a 586 Gene3D G3DSA:3.30.70.1070 502 585 7.9E-4 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 NHAM_RS12355 7f1941e33c12b92c00d3acf49739a48a 586 Pfam PF05036 Sporulation related domain 506 584 3.6E-9 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 NHAM_RS12355 7f1941e33c12b92c00d3acf49739a48a 586 SUPERFAMILY SSF56601 52 286 2.12E-70 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS12355 7f1941e33c12b92c00d3acf49739a48a 586 PANTHER PTHR21581 58 288 5.0E-64 T 22-04-2016 NHAM_RS12355 7f1941e33c12b92c00d3acf49739a48a 586 Gene3D G3DSA:3.40.710.10 56 287 1.8E-81 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS02545 f7dca1d379f0bec7243fe08cd00d6497 450 Pfam PF01595 Domain of unknown function DUF21 9 201 7.6E-43 T 22-04-2016 IPR002550 Domain of unknown function DUF21 NHAM_RS02545 f7dca1d379f0bec7243fe08cd00d6497 450 SUPERFAMILY SSF54631 212 357 5.19E-32 T 22-04-2016 NHAM_RS02545 f7dca1d379f0bec7243fe08cd00d6497 450 PANTHER PTHR22777 3 449 7.1E-156 T 22-04-2016 NHAM_RS02545 f7dca1d379f0bec7243fe08cd00d6497 450 Pfam PF03471 Transporter associated domain 356 432 9.4E-22 T 22-04-2016 IPR005170 Transporter-associated domain NHAM_RS02545 f7dca1d379f0bec7243fe08cd00d6497 450 SUPERFAMILY SSF56176 354 437 4.64E-24 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NHAM_RS02545 f7dca1d379f0bec7243fe08cd00d6497 450 SMART SM01091 355 433 3.0E-30 T 22-04-2016 IPR005170 Transporter-associated domain NHAM_RS02545 f7dca1d379f0bec7243fe08cd00d6497 450 Pfam PF00571 CBS domain 295 340 1.4E-6 T 22-04-2016 IPR000644 CBS domain NHAM_RS02545 f7dca1d379f0bec7243fe08cd00d6497 450 Pfam PF00571 CBS domain 217 274 1.6E-5 T 22-04-2016 IPR000644 CBS domain NHAM_RS02545 f7dca1d379f0bec7243fe08cd00d6497 450 SMART SM00116 226 275 3.5 T 22-04-2016 IPR000644 CBS domain NHAM_RS02545 f7dca1d379f0bec7243fe08cd00d6497 450 SMART SM00116 292 340 1.8 T 22-04-2016 IPR000644 CBS domain NHAM_RS02545 f7dca1d379f0bec7243fe08cd00d6497 450 Gene3D G3DSA:3.30.465.10 335 432 8.0E-28 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NHAM_RS02545 f7dca1d379f0bec7243fe08cd00d6497 450 Gene3D G3DSA:3.10.580.10 204 334 4.4E-19 T 22-04-2016 NHAM_RS15345 f8e9daef4d99f613c536287f2d94d973 567 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 561 35.39 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NHAM_RS15345 f8e9daef4d99f613c536287f2d94d973 567 Pfam PF03814 Potassium-transporting ATPase A subunit 11 559 2.6E-239 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NHAM_RS15345 f8e9daef4d99f613c536287f2d94d973 567 PANTHER PTHR30607 2 565 0.0 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NHAM_RS15345 f8e9daef4d99f613c536287f2d94d973 567 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 561 6.2E-229 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NHAM_RS15345 f8e9daef4d99f613c536287f2d94d973 567 PIRSF PIRSF001294 1 563 1.2E-235 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NHAM_RS01980 1b8179648bfa9c4cc49a149f17c564a0 628 Gene3D G3DSA:3.40.190.10 190 345 6.3E-21 T 22-04-2016 NHAM_RS01980 1b8179648bfa9c4cc49a149f17c564a0 628 SUPERFAMILY SSF53850 85 614 3.98E-100 T 22-04-2016 NHAM_RS01980 1b8179648bfa9c4cc49a149f17c564a0 628 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 123 525 7.2E-60 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain NHAM_RS01980 1b8179648bfa9c4cc49a149f17c564a0 628 PIRSF PIRSF002741 18 619 1.5E-76 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 NHAM_RS01980 1b8179648bfa9c4cc49a149f17c564a0 628 PANTHER PTHR30290 10 378 1.4E-179 T 22-04-2016 NHAM_RS01980 1b8179648bfa9c4cc49a149f17c564a0 628 PANTHER PTHR30290 405 624 1.4E-179 T 22-04-2016 NHAM_RS01980 1b8179648bfa9c4cc49a149f17c564a0 628 Gene3D G3DSA:3.10.105.10 415 585 2.1E-41 T 22-04-2016 NHAM_RS01980 1b8179648bfa9c4cc49a149f17c564a0 628 Gene3D G3DSA:3.10.105.10 346 382 2.1E-41 T 22-04-2016 NHAM_RS01980 1b8179648bfa9c4cc49a149f17c564a0 628 PANTHER PTHR30290:SF2 10 378 1.4E-179 T 22-04-2016 NHAM_RS01980 1b8179648bfa9c4cc49a149f17c564a0 628 PANTHER PTHR30290:SF2 405 624 1.4E-179 T 22-04-2016 NHAM_RS01980 1b8179648bfa9c4cc49a149f17c564a0 628 Gene3D G3DSA:3.90.76.10 118 189 3.7E-15 T 22-04-2016 NHAM_RS04470 a83997a0e02a4a5b66de5afa8dbc963c 742 SUPERFAMILY SSF53474 86 378 2.67E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS04470 a83997a0e02a4a5b66de5afa8dbc963c 742 Gene3D G3DSA:3.40.50.1820 284 374 6.0E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS04470 a83997a0e02a4a5b66de5afa8dbc963c 742 Gene3D G3DSA:3.40.50.1820 140 249 6.0E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS04470 a83997a0e02a4a5b66de5afa8dbc963c 742 Pfam PF11339 Protein of unknown function (DUF3141) 26 604 2.8E-286 T 22-04-2016 IPR024501 Protein of unknown function DUF3141 NHAM_RS14465 0e86e8abaa482e08d322da0f7c76816a 332 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 275 320 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NHAM_RS14465 0e86e8abaa482e08d322da0f7c76816a 332 Pfam PF12833 Helix-turn-helix domain 245 325 1.1E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NHAM_RS14465 0e86e8abaa482e08d322da0f7c76816a 332 PANTHER PTHR11019:SF50 77 332 3.5E-23 T 22-04-2016 NHAM_RS14465 0e86e8abaa482e08d322da0f7c76816a 332 Pfam PF14525 AraC-binding-like domain 30 207 3.8E-8 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NHAM_RS14465 0e86e8abaa482e08d322da0f7c76816a 332 PANTHER PTHR11019 77 332 3.5E-23 T 22-04-2016 NHAM_RS14465 0e86e8abaa482e08d322da0f7c76816a 332 Gene3D G3DSA:1.10.10.60 219 274 3.0E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS14465 0e86e8abaa482e08d322da0f7c76816a 332 SMART SM00342 239 324 5.5E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NHAM_RS14465 0e86e8abaa482e08d322da0f7c76816a 332 SUPERFAMILY SSF46689 274 328 2.06E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS14465 0e86e8abaa482e08d322da0f7c76816a 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 308 324 5.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NHAM_RS14465 0e86e8abaa482e08d322da0f7c76816a 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 293 308 5.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NHAM_RS14465 0e86e8abaa482e08d322da0f7c76816a 332 Gene3D G3DSA:1.10.10.60 275 326 4.7E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS12950 d0196befcc00b50d7b63d78379ef347f 356 Gene3D G3DSA:3.30.565.10 218 344 6.8E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS12950 d0196befcc00b50d7b63d78379ef347f 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 254 344 8.2E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS12950 d0196befcc00b50d7b63d78379ef347f 356 Pfam PF08448 PAS fold 25 135 2.7E-6 T 22-04-2016 IPR013656 PAS fold-4 NHAM_RS12950 d0196befcc00b50d7b63d78379ef347f 356 PANTHER PTHR24423 19 327 2.2E-22 T 22-04-2016 NHAM_RS12950 d0196befcc00b50d7b63d78379ef347f 356 SUPERFAMILY SSF55785 14 132 3.14E-10 T 22-04-2016 IPR000014 PAS domain NHAM_RS12950 d0196befcc00b50d7b63d78379ef347f 356 Gene3D G3DSA:3.30.450.20 19 132 1.2E-10 T 22-04-2016 NHAM_RS12950 d0196befcc00b50d7b63d78379ef347f 356 SMART SM00387 250 349 9.0E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS12950 d0196befcc00b50d7b63d78379ef347f 356 Pfam PF07568 Histidine kinase 154 228 9.7E-19 T 22-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain NHAM_RS12950 d0196befcc00b50d7b63d78379ef347f 356 PANTHER PTHR24423:SF472 19 327 2.2E-22 T 22-04-2016 NHAM_RS12950 d0196befcc00b50d7b63d78379ef347f 356 SUPERFAMILY SSF55874 249 346 6.42E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 Pfam PF00905 Penicillin binding protein transpeptidase domain 450 745 1.7E-41 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 Gene3D G3DSA:1.10.3810.10 60 239 4.4E-68 T 22-04-2016 NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 Pfam PF17092 Penicillin-binding protein OB-like domain 325 448 1.3E-22 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 SUPERFAMILY SSF56601 445 803 1.24E-137 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 SUPERFAMILY SSF56601 270 322 1.24E-137 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 SUPERFAMILY SSF56601 218 240 1.24E-137 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 748 3.1E-186 T 22-04-2016 NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 PANTHER PTHR32282 1 319 6.2E-275 T 22-04-2016 NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 PANTHER PTHR32282 656 812 6.2E-275 T 22-04-2016 NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 PANTHER PTHR32282 444 634 6.2E-275 T 22-04-2016 NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 Pfam PF00912 Transglycosylase 59 236 6.4E-60 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 SUPERFAMILY SSF53955 46 259 2.39E-73 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 PANTHER PTHR32282:SF5 1 319 6.2E-275 T 22-04-2016 NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 PANTHER PTHR32282:SF5 656 812 6.2E-275 T 22-04-2016 NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 PANTHER PTHR32282:SF5 444 634 6.2E-275 T 22-04-2016 NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 Gene3D G3DSA:3.40.710.10 240 322 2.2E-143 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS09330 80856290d2cc35cbd17c7794c9670f74 830 Gene3D G3DSA:3.40.710.10 443 798 2.2E-143 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS12610 509dcc5f90f5dc839d8bf5b0c51458d0 556 Gene3D G3DSA:1.10.443.10 375 538 4.4E-19 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS12610 509dcc5f90f5dc839d8bf5b0c51458d0 556 Pfam PF00589 Phage integrase family 378 539 2.0E-11 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS12610 509dcc5f90f5dc839d8bf5b0c51458d0 556 PANTHER PTHR30349 474 552 1.6E-15 T 22-04-2016 NHAM_RS12610 509dcc5f90f5dc839d8bf5b0c51458d0 556 PANTHER PTHR30349 303 458 1.6E-15 T 22-04-2016 NHAM_RS12610 509dcc5f90f5dc839d8bf5b0c51458d0 556 PANTHER PTHR30349:SF20 222 274 1.6E-15 T 22-04-2016 NHAM_RS12610 509dcc5f90f5dc839d8bf5b0c51458d0 556 Gene3D G3DSA:1.10.150.130 217 340 5.9E-8 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS12610 509dcc5f90f5dc839d8bf5b0c51458d0 556 SUPERFAMILY SSF56349 217 273 1.15E-34 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS12610 509dcc5f90f5dc839d8bf5b0c51458d0 556 SUPERFAMILY SSF56349 303 539 1.15E-34 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS12610 509dcc5f90f5dc839d8bf5b0c51458d0 556 PANTHER PTHR30349:SF20 474 552 1.6E-15 T 22-04-2016 NHAM_RS12610 509dcc5f90f5dc839d8bf5b0c51458d0 556 PANTHER PTHR30349:SF20 303 458 1.6E-15 T 22-04-2016 NHAM_RS12610 509dcc5f90f5dc839d8bf5b0c51458d0 556 PANTHER PTHR30349 222 274 1.6E-15 T 22-04-2016 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 PANTHER PTHR11963:SF13 40 500 1.6E-187 T 22-04-2016 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 184 488 7.8E-118 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 PANTHER PTHR11963 40 500 1.6E-187 T 22-04-2016 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 Gene3D G3DSA:3.40.220.10 11 153 1.3E-25 T 22-04-2016 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 SUPERFAMILY SSF52949 7 182 8.83E-25 T 22-04-2016 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 21 146 2.3E-21 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 344 351 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 Gene3D G3DSA:3.40.630.10 171 498 2.5E-129 T 22-04-2016 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 SUPERFAMILY SSF53187 179 496 9.42E-117 T 22-04-2016 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 PRINTS PR00481 Cytosol aminopeptidase signature 318 339 3.2E-51 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 PRINTS PR00481 Cytosol aminopeptidase signature 340 360 3.2E-51 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 PRINTS PR00481 Cytosol aminopeptidase signature 281 302 3.2E-51 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 PRINTS PR00481 Cytosol aminopeptidase signature 369 384 3.2E-51 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 PRINTS PR00481 Cytosol aminopeptidase signature 259 276 3.2E-51 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NHAM_RS11920 f352cde2076d39217af66a24e40086f7 500 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 5 497 34.289 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 NHAM_RS00565 ae4fb9201d2d15ec45c9215033f03526 202 Hamap MF_00528 Septum formation protein Maf [maf]. 9 201 25.184 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 NHAM_RS00565 ae4fb9201d2d15ec45c9215033f03526 202 PANTHER PTHR11746:SF102 133 198 1.3E-14 T 22-04-2016 NHAM_RS00565 ae4fb9201d2d15ec45c9215033f03526 202 SUPERFAMILY SSF52972 8 195 1.96E-46 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like NHAM_RS00565 ae4fb9201d2d15ec45c9215033f03526 202 Pfam PF02545 Maf-like protein 10 195 1.4E-37 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 NHAM_RS00565 ae4fb9201d2d15ec45c9215033f03526 202 PANTHER PTHR11746 133 198 1.3E-14 T 22-04-2016 NHAM_RS00565 ae4fb9201d2d15ec45c9215033f03526 202 PIRSF PIRSF006305 1 201 5.7E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 NHAM_RS00565 ae4fb9201d2d15ec45c9215033f03526 202 Gene3D G3DSA:3.90.950.10 8 198 1.6E-46 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like NHAM_RS19530 20bf88fc3624358c630443ca599d5648 524 PANTHER PTHR33678:SF1 7 514 8.8E-80 T 22-04-2016 NHAM_RS19530 20bf88fc3624358c630443ca599d5648 524 Pfam PF13005 zinc-finger binding domain of transposase IS66 117 160 4.7E-12 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 NHAM_RS19530 20bf88fc3624358c630443ca599d5648 524 Pfam PF13817 IS66 C-terminal element 477 514 6.0E-12 T 22-04-2016 NHAM_RS19530 20bf88fc3624358c630443ca599d5648 524 Pfam PF13007 Transposase C of IS166 homeodomain 32 109 1.1E-11 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain NHAM_RS19530 20bf88fc3624358c630443ca599d5648 524 Pfam PF03050 Transposase IS66 family 181 470 6.9E-94 T 22-04-2016 IPR004291 Transposase, IS66 NHAM_RS19530 20bf88fc3624358c630443ca599d5648 524 PANTHER PTHR33678 7 514 8.8E-80 T 22-04-2016 NHAM_RS01655 64286ed96bf3ce875e95c99d2e63ba08 132 Gene3D G3DSA:1.10.3790.10 34 117 8.1E-5 T 22-04-2016 IPR008711 Recombinase NinB NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 Gene3D G3DSA:3.30.565.10 461 630 1.2E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 519 627 7.1E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 SUPERFAMILY SSF47384 402 473 6.87E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 SMART SM00388 407 477 4.2E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 Gene3D G3DSA:1.10.287.130 405 460 3.6E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 Pfam PF00512 His Kinase A (phospho-acceptor) domain 408 469 2.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 SUPERFAMILY SSF55874 468 628 4.58E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 PANTHER PTHR24423 391 631 3.5E-114 T 22-04-2016 NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 PANTHER PTHR24423 42 58 3.5E-114 T 22-04-2016 NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 SMART SM00387 519 629 8.4E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 PANTHER PTHR24423:SF492 391 631 3.5E-114 T 22-04-2016 NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 PANTHER PTHR24423:SF492 42 58 3.5E-114 T 22-04-2016 NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 588 4.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 607 4.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 574 4.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS04570 16a30cf8ebde1dbfbd9a26f7204747a3 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 626 4.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07125 c8679be2c56e9acf937b15e8f1935b1b 256 Pfam PF01311 Bacterial export proteins, family 1 14 245 3.0E-63 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NHAM_RS07125 c8679be2c56e9acf937b15e8f1935b1b 256 PANTHER PTHR30065 1 255 2.0E-76 T 22-04-2016 NHAM_RS07125 c8679be2c56e9acf937b15e8f1935b1b 256 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 246 3.6E-60 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 NHAM_RS07125 c8679be2c56e9acf937b15e8f1935b1b 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 2.0E-21 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NHAM_RS07125 c8679be2c56e9acf937b15e8f1935b1b 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 2.0E-21 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NHAM_RS07125 c8679be2c56e9acf937b15e8f1935b1b 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 2.0E-21 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NHAM_RS07125 c8679be2c56e9acf937b15e8f1935b1b 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 2.0E-21 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NHAM_RS07125 c8679be2c56e9acf937b15e8f1935b1b 256 PANTHER PTHR30065:SF1 1 255 2.0E-76 T 22-04-2016 NHAM_RS05595 593e3f57fef03ae9c99b5f7997066c1a 435 ProSitePatterns PS00161 Isocitrate lyase signature. 181 186 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 NHAM_RS05595 593e3f57fef03ae9c99b5f7997066c1a 435 PANTHER PTHR21631 15 435 1.8E-148 T 22-04-2016 NHAM_RS05595 593e3f57fef03ae9c99b5f7997066c1a 435 PIRSF PIRSF001362 2 425 1.0E-222 T 22-04-2016 NHAM_RS05595 593e3f57fef03ae9c99b5f7997066c1a 435 Gene3D G3DSA:3.20.20.60 13 404 8.0E-154 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS05595 593e3f57fef03ae9c99b5f7997066c1a 435 SUPERFAMILY SSF51621 12 422 2.06E-147 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS05595 593e3f57fef03ae9c99b5f7997066c1a 435 PANTHER PTHR21631:SF3 15 435 1.8E-148 T 22-04-2016 NHAM_RS05595 593e3f57fef03ae9c99b5f7997066c1a 435 Pfam PF00463 Isocitrate lyase family 245 421 5.9E-44 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 NHAM_RS05595 593e3f57fef03ae9c99b5f7997066c1a 435 Pfam PF00463 Isocitrate lyase family 14 244 2.5E-51 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 NHAM_RS05595 593e3f57fef03ae9c99b5f7997066c1a 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 14 243 1.1E-92 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 457 1.7E-41 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 SUPERFAMILY SSF55424 344 466 5.5E-43 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 Gene3D G3DSA:3.30.390.30 336 466 5.3E-51 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 329 8.6E-72 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PANTHER PTHR22912 4 460 3.6E-253 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 1.9E-38 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 1.9E-38 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 1.9E-38 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.9E-38 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 1.9E-38 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PANTHER PTHR22912:SF151 4 460 3.6E-253 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 467 5.3E-172 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 Gene3D G3DSA:3.50.50.60 3 140 5.6E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 SUPERFAMILY SSF51905 3 323 3.77E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PIRSF PIRSF000350 1 466 1.8E-92 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 Gene3D G3DSA:3.50.50.60 141 335 1.1E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.1E-79 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.1E-79 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 1.1E-79 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 1.1E-79 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 1.1E-79 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 1.1E-79 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 1.1E-79 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 1.1E-79 T 22-04-2016 NHAM_RS02795 3b5d297c8dedcb47f47e6c057d993dd3 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 1.1E-79 T 22-04-2016 NHAM_RS02845 fffa5da3b9b8d0d456a8c7984ec58889 212 SUPERFAMILY SSF52266 23 203 4.12E-47 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS02845 fffa5da3b9b8d0d456a8c7984ec58889 212 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 28 38 - T 22-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 NHAM_RS02845 fffa5da3b9b8d0d456a8c7984ec58889 212 PANTHER PTHR30383 6 205 3.9E-37 T 22-04-2016 NHAM_RS02845 fffa5da3b9b8d0d456a8c7984ec58889 212 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 30 188 2.8E-21 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS02845 fffa5da3b9b8d0d456a8c7984ec58889 212 Gene3D G3DSA:3.40.50.1110 25 203 3.3E-49 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS15365 7250145c7d15a0f2a23db476ba43676b 265 PANTHER PTHR30007 10 261 1.3E-80 T 22-04-2016 NHAM_RS15365 7250145c7d15a0f2a23db476ba43676b 265 Pfam PF01609 Transposase DDE domain 106 255 2.1E-25 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS15365 7250145c7d15a0f2a23db476ba43676b 265 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 15 88 6.3E-26 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS15365 7250145c7d15a0f2a23db476ba43676b 265 PANTHER PTHR30007:SF0 10 261 1.3E-80 T 22-04-2016 NHAM_RS00250 37704d105e45044d9e19368d684f7152 479 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 73 470 1.1E-118 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 NHAM_RS00250 37704d105e45044d9e19368d684f7152 479 PANTHER PTHR14359:SF20 73 471 1.4E-163 T 22-04-2016 NHAM_RS00250 37704d105e45044d9e19368d684f7152 479 Gene3D G3DSA:3.40.50.1950 68 255 1.6E-60 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 NHAM_RS00250 37704d105e45044d9e19368d684f7152 479 SUPERFAMILY SSF102645 254 474 4.58E-72 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 NHAM_RS00250 37704d105e45044d9e19368d684f7152 479 Gene3D G3DSA:3.40.50.10300 256 475 6.0E-84 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 NHAM_RS00250 37704d105e45044d9e19368d684f7152 479 SUPERFAMILY SSF47598 2 52 2.94E-12 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 NHAM_RS00250 37704d105e45044d9e19368d684f7152 479 SUPERFAMILY SSF52507 73 249 2.22E-55 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 NHAM_RS00250 37704d105e45044d9e19368d684f7152 479 Pfam PF02441 Flavoprotein 74 201 2.5E-31 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 NHAM_RS00250 37704d105e45044d9e19368d684f7152 479 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 256 440 1.7E-70 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 NHAM_RS00250 37704d105e45044d9e19368d684f7152 479 PANTHER PTHR14359 73 471 1.4E-163 T 22-04-2016 NHAM_RS03490 75796da4d1d1834bb33972fbfe95fe6b 194 SUPERFAMILY SSF110857 18 133 6.54E-14 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like NHAM_RS03490 75796da4d1d1834bb33972fbfe95fe6b 194 Gene3D G3DSA:3.10.490.10 14 182 1.2E-24 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like NHAM_RS03490 75796da4d1d1834bb33972fbfe95fe6b 194 PANTHER PTHR12192:SF9 13 183 1.6E-72 T 22-04-2016 NHAM_RS03490 75796da4d1d1834bb33972fbfe95fe6b 194 Pfam PF04752 ChaC-like protein 18 187 2.0E-47 T 22-04-2016 IPR006840 ChaC-like protein NHAM_RS03490 75796da4d1d1834bb33972fbfe95fe6b 194 PANTHER PTHR12192 13 183 1.6E-72 T 22-04-2016 IPR006840 ChaC-like protein NHAM_RS20000 47d4e5d02f2b7ac80c5a9ead2e4fdb79 689 PANTHER PTHR30461:SF3 12 576 9.2E-69 T 22-04-2016 NHAM_RS20000 47d4e5d02f2b7ac80c5a9ead2e4fdb79 689 Pfam PF00239 Resolvase, N terminal domain 12 160 1.2E-26 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS20000 47d4e5d02f2b7ac80c5a9ead2e4fdb79 689 Pfam PF13408 Recombinase zinc beta ribbon domain 326 380 6.9E-8 T 22-04-2016 IPR025827 Recombinase zinc beta ribbon domain NHAM_RS20000 47d4e5d02f2b7ac80c5a9ead2e4fdb79 689 Pfam PF07508 Recombinase 187 307 2.3E-9 T 22-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 NHAM_RS20000 47d4e5d02f2b7ac80c5a9ead2e4fdb79 689 Gene3D G3DSA:3.40.50.1390 12 142 2.1E-15 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS20000 47d4e5d02f2b7ac80c5a9ead2e4fdb79 689 PANTHER PTHR30461 12 576 9.2E-69 T 22-04-2016 NHAM_RS20000 47d4e5d02f2b7ac80c5a9ead2e4fdb79 689 SUPERFAMILY SSF53041 12 160 5.23E-25 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS20000 47d4e5d02f2b7ac80c5a9ead2e4fdb79 689 SMART SM00857 12 161 5.4E-35 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS12540 382363405f8b74b6218f3a749135ab56 194 SUPERFAMILY SSF51735 8 140 2.87E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS12540 382363405f8b74b6218f3a749135ab56 194 Gene3D G3DSA:3.40.50.720 8 146 3.8E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS12540 382363405f8b74b6218f3a749135ab56 194 PANTHER PTHR33303 1 182 2.3E-45 T 22-04-2016 NHAM_RS12540 382363405f8b74b6218f3a749135ab56 194 SMART SM00881 14 111 1.8E-9 T 22-04-2016 IPR003781 CoA-binding GO:0048037 NHAM_RS12540 382363405f8b74b6218f3a749135ab56 194 Pfam PF13380 CoA binding domain 19 137 1.3E-31 T 22-04-2016 IPR003781 CoA-binding GO:0048037 NHAM_RS12540 382363405f8b74b6218f3a749135ab56 194 PANTHER PTHR33303:SF2 1 182 2.3E-45 T 22-04-2016 NHAM_RS02405 1fa1d14caab53daffcecaee8d19c1c8a 200 SUPERFAMILY SSF111304 7 200 9.15E-69 T 22-04-2016 IPR023627 Recombination protein RecR NHAM_RS02405 1fa1d14caab53daffcecaee8d19c1c8a 200 PANTHER PTHR30446:SF0 3 200 2.3E-96 T 22-04-2016 NHAM_RS02405 1fa1d14caab53daffcecaee8d19c1c8a 200 ProSitePatterns PS01300 RecR protein signature. 59 80 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 NHAM_RS02405 1fa1d14caab53daffcecaee8d19c1c8a 200 TIGRFAM TIGR00615 recR: recombination protein RecR 7 197 8.0E-63 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 NHAM_RS02405 1fa1d14caab53daffcecaee8d19c1c8a 200 PANTHER PTHR30446 3 200 2.3E-96 T 22-04-2016 NHAM_RS02405 1fa1d14caab53daffcecaee8d19c1c8a 200 SMART SM00493 82 167 0.0017 T 22-04-2016 IPR006171 Toprim domain NHAM_RS02405 1fa1d14caab53daffcecaee8d19c1c8a 200 Pfam PF13662 Toprim domain 82 173 3.2E-22 T 22-04-2016 IPR006171 Toprim domain NHAM_RS02405 1fa1d14caab53daffcecaee8d19c1c8a 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 200 92.746 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 NHAM_RS02405 1fa1d14caab53daffcecaee8d19c1c8a 200 Pfam PF02132 RecR protein 43 80 3.8E-12 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger NHAM_RS05565 0d8486d9dc5249b73a79c0157d871a50 167 SUPERFAMILY SSF109854 2 165 1.24E-62 T 22-04-2016 NHAM_RS05565 0d8486d9dc5249b73a79c0157d871a50 167 Pfam PF09351 Domain of unknown function (DUF1993) 3 164 5.4E-63 T 22-04-2016 IPR018531 Domain of unknown function DUF1993 NHAM_RS05565 0d8486d9dc5249b73a79c0157d871a50 167 PANTHER PTHR36922:SF1 1 165 1.2E-76 T 22-04-2016 NHAM_RS05565 0d8486d9dc5249b73a79c0157d871a50 167 Gene3D G3DSA:1.20.120.450 1 165 4.3E-71 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NHAM_RS05565 0d8486d9dc5249b73a79c0157d871a50 167 PANTHER PTHR36922 1 165 1.2E-76 T 22-04-2016 NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 Gene3D G3DSA:3.30.70.360 218 328 6.1E-31 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 Pfam PF07687 Peptidase dimerisation domain 218 313 2.9E-9 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 PIRSF PIRSF037215 6 417 1.4E-171 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 Pfam PF01546 Peptidase family M20/M25/M40 147 410 3.0E-17 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 TIGRFAM TIGR01882 peptidase-T: peptidase T 11 417 1.5E-134 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 SUPERFAMILY SSF55031 217 328 1.2E-28 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 146 185 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 Gene3D G3DSA:3.40.630.10 8 217 3.8E-111 T 22-04-2016 NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 Gene3D G3DSA:3.40.630.10 331 415 3.8E-111 T 22-04-2016 NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 SUPERFAMILY SSF53187 10 218 3.02E-73 T 22-04-2016 NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 SUPERFAMILY SSF53187 331 411 3.02E-73 T 22-04-2016 NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 PANTHER PTHR11014 8 98 1.6E-160 T 22-04-2016 NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 PANTHER PTHR11014 139 417 1.6E-160 T 22-04-2016 NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 PANTHER PTHR11014:SF3 8 98 1.6E-160 T 22-04-2016 NHAM_RS11320 bb995f3f6c385867c42fde32711f54a1 417 PANTHER PTHR11014:SF3 139 417 1.6E-160 T 22-04-2016 NHAM_RS17915 d34be21e1d27e7f76b3d3f6f333592b3 150 PANTHER PTHR33221 2 141 9.4E-55 T 22-04-2016 NHAM_RS17915 d34be21e1d27e7f76b3d3f6f333592b3 150 Pfam PF02082 Transcriptional regulator 1 81 7.6E-26 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type NHAM_RS17915 d34be21e1d27e7f76b3d3f6f333592b3 150 Gene3D G3DSA:1.10.10.10 1 138 6.1E-50 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS17915 d34be21e1d27e7f76b3d3f6f333592b3 150 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 7.0E-37 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type NHAM_RS17915 d34be21e1d27e7f76b3d3f6f333592b3 150 PANTHER PTHR33221:SF4 2 141 9.4E-55 T 22-04-2016 NHAM_RS17915 d34be21e1d27e7f76b3d3f6f333592b3 150 SUPERFAMILY SSF46785 2 133 9.62E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS08570 718b45cd12be549ead41161d84a94ff8 334 PANTHER PTHR11101 9 333 2.0E-106 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 NHAM_RS08570 718b45cd12be549ead41161d84a94ff8 334 Pfam PF01384 Phosphate transporter family 171 323 1.8E-54 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 NHAM_RS08570 718b45cd12be549ead41161d84a94ff8 334 Pfam PF01384 Phosphate transporter family 24 165 1.7E-39 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 NHAM_RS12495 6934b5e2652fa8ecff8fc4afa8b66114 155 SUPERFAMILY SSF55298 4 154 1.1E-53 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NHAM_RS12495 6934b5e2652fa8ecff8fc4afa8b66114 155 Gene3D G3DSA:3.30.1330.40 3 154 7.1E-63 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NHAM_RS12495 6934b5e2652fa8ecff8fc4afa8b66114 155 PANTHER PTHR11803 1 154 6.0E-63 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family NHAM_RS12495 6934b5e2652fa8ecff8fc4afa8b66114 155 PANTHER PTHR11803:SF2 1 154 6.0E-63 T 22-04-2016 NHAM_RS12495 6934b5e2652fa8ecff8fc4afa8b66114 155 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 6 148 4.6E-36 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NHAM_RS05730 4b6966296ef8b601781a4186db263c55 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 204.241 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NHAM_RS05730 4b6966296ef8b601781a4186db263c55 430 PANTHER PTHR11846 3 427 5.5E-218 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NHAM_RS05730 4b6966296ef8b601781a4186db263c55 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 428 1.2E-155 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NHAM_RS05730 4b6966296ef8b601781a4186db263c55 430 Gene3D G3DSA:1.10.300.10 103 195 5.4E-28 T 22-04-2016 NHAM_RS05730 4b6966296ef8b601781a4186db263c55 430 SUPERFAMILY SSF52540 1 424 5.2E-166 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05730 4b6966296ef8b601781a4186db263c55 430 SMART SM00788 3 423 2.8E-273 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NHAM_RS05730 4b6966296ef8b601781a4186db263c55 430 Pfam PF00709 Adenylosuccinate synthetase 4 422 3.8E-167 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NHAM_RS05730 4b6966296ef8b601781a4186db263c55 430 Gene3D G3DSA:3.40.440.10 196 265 5.7E-69 T 22-04-2016 NHAM_RS05730 4b6966296ef8b601781a4186db263c55 430 Gene3D G3DSA:3.40.440.10 1 93 5.7E-69 T 22-04-2016 NHAM_RS05730 4b6966296ef8b601781a4186db263c55 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 NHAM_RS05730 4b6966296ef8b601781a4186db263c55 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 NHAM_RS05730 4b6966296ef8b601781a4186db263c55 430 Gene3D G3DSA:3.90.170.10 266 424 1.2E-66 T 22-04-2016 NHAM_RS00585 efee87d60f1ccadb56545e47d9d7931d 234 PANTHER PTHR10721 74 228 4.9E-95 T 22-04-2016 NHAM_RS00585 efee87d60f1ccadb56545e47d9d7931d 234 PANTHER PTHR10721:SF2 74 228 4.9E-95 T 22-04-2016 NHAM_RS00585 efee87d60f1ccadb56545e47d9d7931d 234 PIRSF PIRSF031890 1 234 2.9E-92 T 22-04-2016 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related NHAM_RS00585 efee87d60f1ccadb56545e47d9d7931d 234 Pfam PF04280 Tim44-like domain 87 230 1.1E-47 T 22-04-2016 IPR007379 Tim44-like domain NHAM_RS00585 efee87d60f1ccadb56545e47d9d7931d 234 SUPERFAMILY SSF54427 73 230 6.13E-54 T 22-04-2016 IPR032710 NTF2-like domain NHAM_RS00585 efee87d60f1ccadb56545e47d9d7931d 234 ProDom PD111165 RP434 6 227 6.0E-5 T 22-04-2016 NHAM_RS00585 efee87d60f1ccadb56545e47d9d7931d 234 SMART SM00978 86 232 2.1E-56 T 22-04-2016 IPR007379 Tim44-like domain NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 Gene3D G3DSA:2.40.30.10 202 298 7.2E-23 T 22-04-2016 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 PANTHER PTHR23115:SF14 2 591 5.2E-268 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 PANTHER PTHR23115 2 591 5.2E-268 T 22-04-2016 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 SUPERFAMILY SSF50447 149 292 1.14E-27 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 597 5.1E-277 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 Pfam PF00679 Elongation factor G C-terminus 394 480 1.7E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 Gene3D G3DSA:3.30.70.870 300 399 8.3E-35 T 22-04-2016 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 PRINTS PR00315 GTP-binding elongation factor signature 85 96 7.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 PRINTS PR00315 GTP-binding elongation factor signature 121 130 7.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 PRINTS PR00315 GTP-binding elongation factor signature 69 79 7.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 PRINTS PR00315 GTP-binding elongation factor signature 5 18 7.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 PRINTS PR00315 GTP-binding elongation factor signature 49 57 7.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 SMART SM00838 394 482 0.003 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 SUPERFAMILY SSF54980 300 385 7.67E-13 T 22-04-2016 IPR009022 Elongation factor G, III-V domain NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 Gene3D G3DSA:3.30.70.240 400 480 6.2E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 Gene3D G3DSA:3.40.50.300 2 201 2.6E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 Pfam PF03144 Elongation factor Tu domain 2 216 287 1.2E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 SUPERFAMILY SSF52540 3 197 6.96E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 Gene3D G3DSA:2.40.50.250 481 575 2.9E-40 T 22-04-2016 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 Pfam PF00009 Elongation factor Tu GTP binding domain 2 192 5.0E-57 T 22-04-2016 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 144 1.4E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NHAM_RS03340 704f9637be015949794c4c59ef217d62 606 SUPERFAMILY SSF54980 397 511 2.49E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain NHAM_RS08300 94bf9b1ac44841c1f24095c1ecebc32b 410 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 17 249 9.4E-54 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 NHAM_RS08300 94bf9b1ac44841c1f24095c1ecebc32b 410 PANTHER PTHR12029 18 192 8.8E-24 T 22-04-2016 NHAM_RS08300 94bf9b1ac44841c1f24095c1ecebc32b 410 Gene3D G3DSA:3.40.1280.10 17 171 7.0E-29 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NHAM_RS08300 94bf9b1ac44841c1f24095c1ecebc32b 410 SUPERFAMILY SSF75217 12 174 3.27E-29 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases NHAM_RS08300 94bf9b1ac44841c1f24095c1ecebc32b 410 Pfam PF04480 Protein of unknown function (DUF559) 291 391 1.4E-16 T 22-04-2016 IPR007569 Domain of unknown function DUF559 NHAM_RS08300 94bf9b1ac44841c1f24095c1ecebc32b 410 Pfam PF00588 SpoU rRNA Methylase family 17 167 6.9E-27 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 NHAM_RS13635 dce69bb51adfa33b75d7dd7ca86bbc46 372 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 99 357 1.3E-72 T 22-04-2016 IPR019285 Protein of unknown function DUF2336 NHAM_RS13635 dce69bb51adfa33b75d7dd7ca86bbc46 372 PANTHER PTHR40253 3 367 4.2E-176 T 22-04-2016 NHAM_RS13635 dce69bb51adfa33b75d7dd7ca86bbc46 372 PANTHER PTHR40253:SF3 3 367 4.2E-176 T 22-04-2016 NHAM_RS10315 b88cd6d237990e8ee14b4646eabfbc3a 382 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 16 379 5.8E-107 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 NHAM_RS10315 b88cd6d237990e8ee14b4646eabfbc3a 382 Pfam PF05065 Phage capsid family 103 379 4.7E-81 T 22-04-2016 IPR024455 Phage capsid NHAM_RS10315 b88cd6d237990e8ee14b4646eabfbc3a 382 SUPERFAMILY SSF56563 96 380 2.48E-73 T 22-04-2016 NHAM_RS01755 b88cd6d237990e8ee14b4646eabfbc3a 382 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 16 379 5.8E-107 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 NHAM_RS01755 b88cd6d237990e8ee14b4646eabfbc3a 382 Pfam PF05065 Phage capsid family 103 379 4.7E-81 T 22-04-2016 IPR024455 Phage capsid NHAM_RS01755 b88cd6d237990e8ee14b4646eabfbc3a 382 SUPERFAMILY SSF56563 96 380 2.48E-73 T 22-04-2016 NHAM_RS08370 ab5a2fd7d203e2012d63dd25f9f6551f 377 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 1 360 1.5E-114 T 22-04-2016 IPR010640 Low temperature requirement A NHAM_RS08370 ab5a2fd7d203e2012d63dd25f9f6551f 377 PANTHER PTHR36840 1 370 4.7E-70 T 22-04-2016 NHAM_RS08370 ab5a2fd7d203e2012d63dd25f9f6551f 377 PANTHER PTHR36840:SF1 1 370 4.7E-70 T 22-04-2016 NHAM_RS17715 952b054717d657e8f1852ad23e388638 205 PANTHER PTHR11403 9 205 2.4E-64 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 NHAM_RS17715 952b054717d657e8f1852ad23e388638 205 SUPERFAMILY SSF81452 26 202 1.31E-45 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 NHAM_RS17715 952b054717d657e8f1852ad23e388638 205 Gene3D G3DSA:1.20.120.80 24 202 1.5E-42 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 NHAM_RS17715 952b054717d657e8f1852ad23e388638 205 Pfam PF00510 Cytochrome c oxidase subunit III 27 201 2.3E-9 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 NHAM_RS17715 952b054717d657e8f1852ad23e388638 205 PANTHER PTHR11403:SF2 9 205 2.4E-64 T 22-04-2016 NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 Gene3D G3DSA:3.40.140.20 371 520 1.5E-56 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 PIRSF PIRSF000414 2 530 1.1E-210 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 SUPERFAMILY SSF53927 216 530 2.31E-125 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 PANTHER PTHR11692 6 530 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 PANTHER PTHR11692:SF2 6 530 0.0 T 22-04-2016 NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 Gene3D G3DSA:3.40.50.1380 8 192 1.5E-83 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 139 454 1.6E-115 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 530 44.107 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 SMART SM00851 20 134 4.3E-56 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 SMART SM00798 139 455 2.8E-197 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 10 530 1.4E-202 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 Pfam PF02142 MGS-like domain 20 133 1.6E-26 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 SUPERFAMILY SSF52335 9 197 1.07E-68 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain NHAM_RS00980 42615b488d13f1ca919e2d98e08535a7 530 Gene3D G3DSA:3.40.140.20 244 361 6.3E-47 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 NHAM_RS15895 e452376d230b064768a2b17c94778a24 160 SUPERFAMILY SSF54637 2 158 9.59E-32 T 22-04-2016 IPR029069 HotDog domain NHAM_RS15895 e452376d230b064768a2b17c94778a24 160 Gene3D G3DSA:3.10.129.10 2 158 3.2E-38 T 22-04-2016 IPR029069 HotDog domain NHAM_RS15895 e452376d230b064768a2b17c94778a24 160 PANTHER PTHR13078 2 159 3.2E-43 T 22-04-2016 NHAM_RS15895 e452376d230b064768a2b17c94778a24 160 Pfam PF01575 MaoC like domain 9 114 7.4E-8 T 22-04-2016 IPR002539 MaoC-like domain NHAM_RS04850 e74aec1cb51688b4565937682861df1c 131 PANTHER PTHR33154 1 106 1.3E-20 T 22-04-2016 NHAM_RS04850 e74aec1cb51688b4565937682861df1c 131 SMART SM00418 16 94 1.5E-17 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS04850 e74aec1cb51688b4565937682861df1c 131 Gene3D G3DSA:1.10.10.10 6 97 4.6E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04850 e74aec1cb51688b4565937682861df1c 131 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 3.3E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS04850 e74aec1cb51688b4565937682861df1c 131 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 3.3E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS04850 e74aec1cb51688b4565937682861df1c 131 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 3.3E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS04850 e74aec1cb51688b4565937682861df1c 131 SUPERFAMILY SSF46785 3 96 1.32E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04850 e74aec1cb51688b4565937682861df1c 131 Pfam PF01022 Bacterial regulatory protein, arsR family 24 68 8.0E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS04850 e74aec1cb51688b4565937682861df1c 131 PANTHER PTHR33154:SF9 1 106 1.3E-20 T 22-04-2016 NHAM_RS07620 08f0d4d99c56c43bb6aff39158d032f3 532 SMART SM00917 380 525 3.7E-36 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NHAM_RS07620 08f0d4d99c56c43bb6aff39158d032f3 532 PANTHER PTHR10277:SF5 1 532 1.4E-252 T 22-04-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101|UniPathway: UPA00047 NHAM_RS07620 08f0d4d99c56c43bb6aff39158d032f3 532 PANTHER PTHR10277 1 532 1.4E-252 T 22-04-2016 NHAM_RS07620 08f0d4d99c56c43bb6aff39158d032f3 532 Pfam PF08502 LeuA allosteric (dimerisation) domain 382 522 9.1E-29 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NHAM_RS07620 08f0d4d99c56c43bb6aff39158d032f3 532 Gene3D G3DSA:3.20.20.70 3 351 1.1E-115 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS07620 08f0d4d99c56c43bb6aff39158d032f3 532 SUPERFAMILY SSF110921 422 521 2.62E-21 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NHAM_RS07620 08f0d4d99c56c43bb6aff39158d032f3 532 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 6 528 5.8E-185 T 22-04-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101|UniPathway: UPA00047 NHAM_RS07620 08f0d4d99c56c43bb6aff39158d032f3 532 SUPERFAMILY SSF51569 4 298 1.76E-78 T 22-04-2016 NHAM_RS07620 08f0d4d99c56c43bb6aff39158d032f3 532 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NHAM_RS07620 08f0d4d99c56c43bb6aff39158d032f3 532 Pfam PF00682 HMGL-like 6 256 4.1E-48 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 NHAM_RS13485 75e9fcbfb70df34f3d6c9edd1d1ca1ff 285 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 31 46 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 NHAM_RS13485 75e9fcbfb70df34f3d6c9edd1d1ca1ff 285 Gene3D G3DSA:3.20.20.20 29 282 8.1E-99 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 NHAM_RS13485 75e9fcbfb70df34f3d6c9edd1d1ca1ff 285 PANTHER PTHR20941 29 285 1.3E-101 T 22-04-2016 NHAM_RS13485 75e9fcbfb70df34f3d6c9edd1d1ca1ff 285 SUPERFAMILY SSF51717 27 281 8.11E-91 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 NHAM_RS13485 75e9fcbfb70df34f3d6c9edd1d1ca1ff 285 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 65 78 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 NHAM_RS13485 75e9fcbfb70df34f3d6c9edd1d1ca1ff 285 PANTHER PTHR20941:SF1 29 285 1.3E-101 T 22-04-2016 NHAM_RS13485 75e9fcbfb70df34f3d6c9edd1d1ca1ff 285 Pfam PF00809 Pterin binding enzyme 32 266 8.8E-80 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 NHAM_RS13485 75e9fcbfb70df34f3d6c9edd1d1ca1ff 285 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 31 280 2.4E-88 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 Pfam PF00989 PAS fold 389 493 7.1E-13 T 22-04-2016 IPR013767 PAS fold GO:0006355 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 PIRSF PIRSF037532 4 737 4.0E-248 T 22-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 SUPERFAMILY SSF55785 385 494 1.47E-11 T 22-04-2016 IPR000014 PAS domain NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 SMART SM00387 615 733 2.2E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 Pfam PF00512 His Kinase A (phospho-acceptor) domain 506 572 1.9E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 SMART SM00388 504 575 2.3E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 SUPERFAMILY SSF47384 500 573 1.49E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 SUPERFAMILY SSF55874 569 713 7.73E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 Gene3D G3DSA:1.10.287.130 501 571 2.5E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 Gene3D G3DSA:3.30.450.20 386 494 4.8E-15 T 22-04-2016 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 SMART SM00091 388 456 4.1E-5 T 22-04-2016 IPR000014 PAS domain NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 388 501 9.1E-13 T 22-04-2016 IPR000014 PAS domain NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 Pfam PF00672 HAMP domain 303 370 3.0E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 SMART SM00304 321 374 1.3E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 618 724 6.1E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 PANTHER PTHR24423:SF520 386 712 1.1E-97 T 22-04-2016 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 PANTHER PTHR24423:SF520 66 91 1.1E-97 T 22-04-2016 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 PANTHER PTHR24423 386 712 1.1E-97 T 22-04-2016 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 PANTHER PTHR24423 66 91 1.1E-97 T 22-04-2016 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 SUPERFAMILY SSF158472 323 371 1.31E-7 T 22-04-2016 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 Gene3D G3DSA:3.30.565.10 581 713 4.2E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 688 706 5.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 673 5.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS09405 6bbb9db434579e62f747f3e8b35ca047 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 687 5.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07890 332543a970736330c789c13d0bbc970a 156 SUPERFAMILY SSF47973 4 149 2.75E-63 T 22-04-2016 IPR023798 Ribosomal protein S7 domain NHAM_RS07890 332543a970736330c789c13d0bbc970a 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.9E-70 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 NHAM_RS07890 332543a970736330c789c13d0bbc970a 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 NHAM_RS07890 332543a970736330c789c13d0bbc970a 156 PIRSF PIRSF002122 2 156 3.0E-60 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 NHAM_RS07890 332543a970736330c789c13d0bbc970a 156 PANTHER PTHR11205 1 156 8.8E-96 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 NHAM_RS07890 332543a970736330c789c13d0bbc970a 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.8E-67 T 22-04-2016 IPR023798 Ribosomal protein S7 domain NHAM_RS07890 332543a970736330c789c13d0bbc970a 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.483 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 NHAM_RS07890 332543a970736330c789c13d0bbc970a 156 Gene3D G3DSA:1.10.455.10 1 149 5.4E-67 T 22-04-2016 IPR023798 Ribosomal protein S7 domain NHAM_RS19150 84b06d5f1734753952aa897e3f9e126f 560 Gene3D G3DSA:3.40.50.980 24 151 6.6E-39 T 22-04-2016 NHAM_RS19150 84b06d5f1734753952aa897e3f9e126f 560 Gene3D G3DSA:3.40.50.980 183 213 6.6E-39 T 22-04-2016 NHAM_RS19150 84b06d5f1734753952aa897e3f9e126f 560 PANTHER PTHR24096 174 556 7.9E-170 T 22-04-2016 NHAM_RS19150 84b06d5f1734753952aa897e3f9e126f 560 PANTHER PTHR24096 1 154 7.9E-170 T 22-04-2016 NHAM_RS19150 84b06d5f1734753952aa897e3f9e126f 560 Gene3D G3DSA:3.30.300.30 458 554 6.9E-31 T 22-04-2016 NHAM_RS19150 84b06d5f1734753952aa897e3f9e126f 560 Gene3D G3DSA:2.30.38.10 382 454 7.6E-29 T 22-04-2016 NHAM_RS19150 84b06d5f1734753952aa897e3f9e126f 560 Pfam PF00501 AMP-binding enzyme 30 463 1.7E-103 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NHAM_RS19150 84b06d5f1734753952aa897e3f9e126f 560 Gene3D G3DSA:3.40.50.980 214 381 3.2E-40 T 22-04-2016 NHAM_RS19150 84b06d5f1734753952aa897e3f9e126f 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 472 546 2.8E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NHAM_RS19150 84b06d5f1734753952aa897e3f9e126f 560 SUPERFAMILY SSF56801 21 555 2.35E-150 T 22-04-2016 NHAM_RS19150 84b06d5f1734753952aa897e3f9e126f 560 ProSitePatterns PS00455 Putative AMP-binding domain signature. 209 220 - T 22-04-2016 IPR020845 AMP-binding, conserved site NHAM_RS04320 9abedd8b99c29a260b7c9fee94776041 343 PANTHER PTHR33055 3 343 1.4E-135 T 22-04-2016 NHAM_RS04320 9abedd8b99c29a260b7c9fee94776041 343 Pfam PF01548 Transposase 7 145 5.4E-18 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS04320 9abedd8b99c29a260b7c9fee94776041 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 286 4.6E-21 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS04320 9abedd8b99c29a260b7c9fee94776041 343 PANTHER PTHR33055:SF2 3 343 1.4E-135 T 22-04-2016 NHAM_RS01690 a08e738fb933a5da15d5cd13be12cf5f 389 PANTHER PTHR30349 87 361 6.2E-24 T 22-04-2016 NHAM_RS01690 a08e738fb933a5da15d5cd13be12cf5f 389 Pfam PF00589 Phage integrase family 182 332 4.1E-13 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS01690 a08e738fb933a5da15d5cd13be12cf5f 389 PANTHER PTHR30349:SF20 87 361 6.2E-24 T 22-04-2016 NHAM_RS01690 a08e738fb933a5da15d5cd13be12cf5f 389 SUPERFAMILY SSF56349 72 338 3.53E-44 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS01690 a08e738fb933a5da15d5cd13be12cf5f 389 Gene3D G3DSA:1.10.443.10 176 335 2.3E-24 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS01690 a08e738fb933a5da15d5cd13be12cf5f 389 Gene3D G3DSA:1.10.150.130 76 163 2.3E-8 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS14415 e0423a93ff6a109b0a35133e68c478a4 419 Gene3D G3DSA:3.40.640.10 56 317 4.9E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS14415 e0423a93ff6a109b0a35133e68c478a4 419 PIRSF PIRSF000521 20 418 1.2E-24 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS14415 e0423a93ff6a109b0a35133e68c478a4 419 Pfam PF00202 Aminotransferase class-III 16 415 4.3E-110 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS14415 e0423a93ff6a109b0a35133e68c478a4 419 SUPERFAMILY SSF53383 5 416 2.28E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS14415 e0423a93ff6a109b0a35133e68c478a4 419 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 7 415 1.4E-162 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 NHAM_RS14415 e0423a93ff6a109b0a35133e68c478a4 419 PANTHER PTHR11986 7 416 3.6E-169 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS14415 e0423a93ff6a109b0a35133e68c478a4 419 PANTHER PTHR11986:SF8 7 416 3.6E-169 T 22-04-2016 NHAM_RS14415 e0423a93ff6a109b0a35133e68c478a4 419 Gene3D G3DSA:3.90.1150.10 320 416 3.5E-46 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS14415 e0423a93ff6a109b0a35133e68c478a4 419 Gene3D G3DSA:3.90.1150.10 4 55 3.5E-46 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS16790 425ab33621a7917640d9795b912b29ea 152 PANTHER PTHR34846:SF2 21 141 8.8E-12 T 22-04-2016 NHAM_RS16790 425ab33621a7917640d9795b912b29ea 152 PANTHER PTHR34846 21 141 8.8E-12 T 22-04-2016 NHAM_RS16790 425ab33621a7917640d9795b912b29ea 152 SUPERFAMILY SSF69118 5 142 1.44E-48 T 22-04-2016 IPR029032 AhpD-like NHAM_RS16790 425ab33621a7917640d9795b912b29ea 152 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 94 6.7E-22 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NHAM_RS16790 425ab33621a7917640d9795b912b29ea 152 Gene3D G3DSA:1.20.1290.10 3 141 2.6E-56 T 22-04-2016 IPR029032 AhpD-like NHAM_RS16790 425ab33621a7917640d9795b912b29ea 152 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 78 8.1E-18 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 451 1.3E-57 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 Pfam PF13361 UvrD-like helicase C-terminal domain 717 849 6.8E-10 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 Pfam PF13361 UvrD-like helicase C-terminal domain 463 639 4.2E-9 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 SUPERFAMILY SSF52540 12 73 1.97E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 SUPERFAMILY SSF52540 829 854 1.97E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 SUPERFAMILY SSF52540 105 197 1.97E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 SUPERFAMILY SSF52540 335 802 1.97E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 Gene3D G3DSA:3.40.50.300 113 175 1.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 Gene3D G3DSA:3.40.50.300 10 69 1.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 Gene3D G3DSA:3.40.50.300 345 452 1.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 PANTHER PTHR11070 828 851 7.7E-100 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 PANTHER PTHR11070 10 83 7.7E-100 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 PANTHER PTHR11070 333 801 7.7E-100 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 PANTHER PTHR11070 105 195 7.7E-100 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 Gene3D G3DSA:3.40.50.300 465 589 8.5E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 Gene3D G3DSA:3.40.50.300 756 872 8.5E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 Gene3D G3DSA:1.10.486.10 596 736 2.4E-10 T 22-04-2016 NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 PANTHER PTHR11070:SF7 828 851 7.7E-100 T 22-04-2016 NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 PANTHER PTHR11070:SF7 10 83 7.7E-100 T 22-04-2016 NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 PANTHER PTHR11070:SF7 333 801 7.7E-100 T 22-04-2016 NHAM_RS10175 eb4aa5660072fdc393d671b87837ec92 1110 PANTHER PTHR11070:SF7 105 195 7.7E-100 T 22-04-2016 NHAM_RS01825 52742c627811f26cac08436297276508 724 SUPERFAMILY SSF52172 597 715 5.41E-27 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS01825 52742c627811f26cac08436297276508 724 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 457 574 1.4E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01825 52742c627811f26cac08436297276508 724 PANTHER PTHR24423 334 715 6.9E-140 T 22-04-2016 NHAM_RS01825 52742c627811f26cac08436297276508 724 PANTHER PTHR24423 212 256 6.9E-140 T 22-04-2016 NHAM_RS01825 52742c627811f26cac08436297276508 724 PANTHER PTHR24423 101 157 6.9E-140 T 22-04-2016 NHAM_RS01825 52742c627811f26cac08436297276508 724 PANTHER PTHR24423 14 31 6.9E-140 T 22-04-2016 NHAM_RS01825 52742c627811f26cac08436297276508 724 PANTHER PTHR24423:SF438 334 715 6.9E-140 T 22-04-2016 NHAM_RS01825 52742c627811f26cac08436297276508 724 PANTHER PTHR24423:SF438 212 256 6.9E-140 T 22-04-2016 NHAM_RS01825 52742c627811f26cac08436297276508 724 PANTHER PTHR24423:SF438 101 157 6.9E-140 T 22-04-2016 NHAM_RS01825 52742c627811f26cac08436297276508 724 PANTHER PTHR24423:SF438 14 31 6.9E-140 T 22-04-2016 NHAM_RS01825 52742c627811f26cac08436297276508 724 Gene3D G3DSA:3.40.50.2300 596 714 7.6E-30 T 22-04-2016 NHAM_RS01825 52742c627811f26cac08436297276508 724 SUPERFAMILY SSF55874 405 577 3.01E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01825 52742c627811f26cac08436297276508 724 SUPERFAMILY SSF47384 341 412 4.51E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01825 52742c627811f26cac08436297276508 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 533 4.04E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01825 52742c627811f26cac08436297276508 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 554 4.04E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01825 52742c627811f26cac08436297276508 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 519 4.04E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01825 52742c627811f26cac08436297276508 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 573 4.04E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS01825 52742c627811f26cac08436297276508 724 Pfam PF00072 Response regulator receiver domain 598 706 3.1E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS01825 52742c627811f26cac08436297276508 724 SMART SM00387 456 576 6.5E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01825 52742c627811f26cac08436297276508 724 SMART SM00448 596 706 8.2E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS01825 52742c627811f26cac08436297276508 724 Gene3D G3DSA:3.30.565.10 390 575 3.8E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS01825 52742c627811f26cac08436297276508 724 Gene3D G3DSA:3.30.450.20 97 193 4.3E-5 T 22-04-2016 NHAM_RS01825 52742c627811f26cac08436297276508 724 SMART SM00388 350 415 5.8E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS01825 52742c627811f26cac08436297276508 724 Pfam PF02743 Cache domain 68 233 3.1E-14 T 22-04-2016 IPR033479 Double Cache domain 1 NHAM_RS04405 6487e189e47f186881893516dd75fbf9 153 Pfam PF01575 MaoC like domain 17 129 1.0E-15 T 22-04-2016 IPR002539 MaoC-like domain NHAM_RS04405 6487e189e47f186881893516dd75fbf9 153 PANTHER PTHR13078 10 153 6.5E-34 T 22-04-2016 NHAM_RS04405 6487e189e47f186881893516dd75fbf9 153 SUPERFAMILY SSF54637 7 152 8.72E-35 T 22-04-2016 IPR029069 HotDog domain NHAM_RS04405 6487e189e47f186881893516dd75fbf9 153 Gene3D G3DSA:3.10.129.10 5 152 4.2E-38 T 22-04-2016 IPR029069 HotDog domain NHAM_RS11455 8c831b871a42646a8ca958e069d1569f 253 Gene3D G3DSA:2.40.50.140 3 54 3.1E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS11455 8c831b871a42646a8ca958e069d1569f 253 Pfam PF02565 Recombination protein O C terminal 87 223 1.4E-26 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 NHAM_RS11455 8c831b871a42646a8ca958e069d1569f 253 Pfam PF11967 Recombination protein O N terminal 1 67 9.6E-19 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal NHAM_RS11455 8c831b871a42646a8ca958e069d1569f 253 SUPERFAMILY SSF50249 1 67 7.71E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS11455 8c831b871a42646a8ca958e069d1569f 253 SUPERFAMILY SSF57863 87 182 8.89E-13 T 22-04-2016 NHAM_RS11455 8c831b871a42646a8ca958e069d1569f 253 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 238 2.0E-37 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 NHAM_RS11455 8c831b871a42646a8ca958e069d1569f 253 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 132 239 4.0E-46 T 22-04-2016 NHAM_RS11455 8c831b871a42646a8ca958e069d1569f 253 PANTHER PTHR33991 1 248 1.1E-44 T 22-04-2016 NHAM_RS11455 8c831b871a42646a8ca958e069d1569f 253 Hamap MF_00201 DNA repair protein RecO [recO]. 1 239 18.818 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 NHAM_RS18535 f8d152712fa8f4672db484120ac128a2 597 Gene3D G3DSA:1.50.10.10 218 590 3.9E-74 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NHAM_RS18535 f8d152712fa8f4672db484120ac128a2 597 Pfam PF00723 Glycosyl hydrolases family 15 222 501 9.8E-28 T 22-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 NHAM_RS18535 f8d152712fa8f4672db484120ac128a2 597 PANTHER PTHR31616:SF2 6 597 3.2E-113 T 22-04-2016 NHAM_RS18535 f8d152712fa8f4672db484120ac128a2 597 PANTHER PTHR31616 6 597 3.2E-113 T 22-04-2016 NHAM_RS18535 f8d152712fa8f4672db484120ac128a2 597 SUPERFAMILY SSF48208 205 587 2.04E-81 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NHAM_RS14015 7dba18f5299e43eaa4252396ccc92ad7 110 Pfam PF13467 Ribbon-helix-helix domain 22 84 2.0E-24 T 22-04-2016 IPR027373 Ribbon-helix-helix domain NHAM_RS03455 f4c4887cf646f08739b1fa306d2b4bb8 844 TIGRFAM TIGR02302 aProt_lowcomp: TIGR02302 family protein 24 844 0.0 T 22-04-2016 IPR012683 Conserved hypothetical protein CHP02302, transmembrane NHAM_RS03455 f4c4887cf646f08739b1fa306d2b4bb8 844 Pfam PF13779 Domain of unknown function (DUF4175) 37 842 2.8E-281 T 22-04-2016 IPR012683 Conserved hypothetical protein CHP02302, transmembrane NHAM_RS17300 64ea98939e5fa501d6ecf7f002110699 442 PANTHER PTHR15184 6 436 7.0E-206 T 22-04-2016 NHAM_RS17300 64ea98939e5fa501d6ecf7f002110699 442 SUPERFAMILY SSF52540 91 359 3.19E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17300 64ea98939e5fa501d6ecf7f002110699 442 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 5 435 2.4E-163 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS17300 64ea98939e5fa501d6ecf7f002110699 442 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 20 82 1.1E-4 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS17300 64ea98939e5fa501d6ecf7f002110699 442 TIGRFAM TIGR03498 FliI_clade3: flagellar protein export ATPase FliI 18 435 7.2E-206 T 22-04-2016 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 GO:0009288|GO:0016887|GO:0030257|GO:0044781 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS17300 64ea98939e5fa501d6ecf7f002110699 442 Gene3D G3DSA:3.40.50.300 92 357 3.1E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17300 64ea98939e5fa501d6ecf7f002110699 442 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 144 355 4.9E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS17300 64ea98939e5fa501d6ecf7f002110699 442 SMART SM00382 156 340 4.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS17300 64ea98939e5fa501d6ecf7f002110699 442 PANTHER PTHR15184:SF9 6 436 7.0E-206 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS17300 64ea98939e5fa501d6ecf7f002110699 442 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 346 355 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS20005 30cd286d3d873a6cb8cc49ef45453341 123 PANTHER PTHR33055 3 120 6.1E-36 T 22-04-2016 NHAM_RS20005 30cd286d3d873a6cb8cc49ef45453341 123 PANTHER PTHR33055:SF3 3 120 6.1E-36 T 22-04-2016 NHAM_RS20005 30cd286d3d873a6cb8cc49ef45453341 123 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 75 9.5E-19 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS18760 598a073ea9c335c9ea9a66365c00a45a 142 Gene3D G3DSA:2.60.120.10 11 116 4.8E-18 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS18760 598a073ea9c335c9ea9a66365c00a45a 142 Pfam PF07883 Cupin domain 46 114 5.8E-15 T 22-04-2016 IPR013096 Cupin 2, conserved barrel NHAM_RS18760 598a073ea9c335c9ea9a66365c00a45a 142 PIRSF PIRSF037087 2 135 3.8E-43 T 22-04-2016 IPR017102 Uncharacterised conserved protein UCP037087 NHAM_RS18760 598a073ea9c335c9ea9a66365c00a45a 142 SUPERFAMILY SSF51182 15 129 8.05E-21 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS00100 30ce281925f1e04b660c45d77729b0b2 473 Gene3D G3DSA:3.80.30.20 155 387 3.8E-75 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NHAM_RS00100 30ce281925f1e04b660c45d77729b0b2 473 Pfam PF00919 Uncharacterized protein family UPF0004 6 109 6.8E-30 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 NHAM_RS00100 30ce281925f1e04b660c45d77729b0b2 473 PANTHER PTHR11918:SF43 5 447 7.9E-172 T 22-04-2016 NHAM_RS00100 30ce281925f1e04b660c45d77729b0b2 473 SUPERFAMILY SSF102114 143 380 1.83E-59 T 22-04-2016 NHAM_RS00100 30ce281925f1e04b660c45d77729b0b2 473 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 5 448 69.511 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 NHAM_RS00100 30ce281925f1e04b660c45d77729b0b2 473 PANTHER PTHR11918 5 447 7.9E-172 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein NHAM_RS00100 30ce281925f1e04b660c45d77729b0b2 473 SMART SM00729 156 376 5.3E-57 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NHAM_RS00100 30ce281925f1e04b660c45d77729b0b2 473 Pfam PF01938 TRAM domain 389 447 3.5E-5 T 22-04-2016 IPR002792 TRAM domain NHAM_RS00100 30ce281925f1e04b660c45d77729b0b2 473 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 6 447 9.7E-139 T 22-04-2016 NHAM_RS00100 30ce281925f1e04b660c45d77729b0b2 473 Pfam PF04055 Radical SAM superfamily 160 333 9.8E-32 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NHAM_RS00100 30ce281925f1e04b660c45d77729b0b2 473 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 445 9.2E-141 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 NHAM_RS00100 30ce281925f1e04b660c45d77729b0b2 473 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 160 180 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 NHAM_RS13725 2282e6d261b0f689f74f4fef7b089f12 862 PANTHER PTHR33406:SF2 160 858 1.1E-144 T 22-04-2016 NHAM_RS13725 2282e6d261b0f689f74f4fef7b089f12 862 PANTHER PTHR33406:SF2 2 99 1.1E-144 T 22-04-2016 NHAM_RS13725 2282e6d261b0f689f74f4fef7b089f12 862 PANTHER PTHR33406 160 858 1.1E-144 T 22-04-2016 NHAM_RS13725 2282e6d261b0f689f74f4fef7b089f12 862 PANTHER PTHR33406 2 99 1.1E-144 T 22-04-2016 NHAM_RS13725 2282e6d261b0f689f74f4fef7b089f12 862 SUPERFAMILY SSF82866 235 428 2.35E-28 T 22-04-2016 NHAM_RS13725 2282e6d261b0f689f74f4fef7b089f12 862 Gene3D G3DSA:1.20.1640.10 708 854 2.4E-15 T 22-04-2016 NHAM_RS13725 2282e6d261b0f689f74f4fef7b089f12 862 Gene3D G3DSA:1.20.1640.10 232 433 1.5E-29 T 22-04-2016 NHAM_RS13725 2282e6d261b0f689f74f4fef7b089f12 862 TIGRFAM TIGR03480 HpnN: hopanoid biosynthesis associated RND transporter like protein HpnN 6 858 0.0 T 22-04-2016 IPR017841 Hopanoid biosynthesis associated RND transporter-like protein HpnN NHAM_RS13725 2282e6d261b0f689f74f4fef7b089f12 862 SUPERFAMILY SSF82866 684 855 4.19E-24 T 22-04-2016 NHAM_RS13725 2282e6d261b0f689f74f4fef7b089f12 862 Pfam PF03176 MMPL family 652 854 9.7E-8 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 NHAM_RS13725 2282e6d261b0f689f74f4fef7b089f12 862 Pfam PF03176 MMPL family 227 426 2.1E-20 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 SUPERFAMILY SSF48334 293 598 1.83E-70 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 PANTHER PTHR11361 15 906 0.0 T 22-04-2016 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 SUPERFAMILY SSF52540 601 839 1.98E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 Pfam PF01624 MutS domain I 22 138 3.0E-41 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 Pfam PF00488 MutS domain V 652 839 2.4E-84 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 SMART SM00534 649 836 3.7E-111 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 Gene3D G3DSA:1.10.1420.10 289 497 1.0E-44 T 22-04-2016 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 Pfam PF05190 MutS family domain IV 457 551 2.2E-20 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 Gene3D G3DSA:3.40.1170.10 17 139 4.2E-48 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 21 896 23.404 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 SUPERFAMILY SSF53150 136 306 1.57E-34 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 Gene3D G3DSA:3.30.420.110 146 281 7.9E-28 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 Pfam PF05188 MutS domain II 147 273 2.8E-18 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 730 746 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 22 901 3.2E-252 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 PANTHER PTHR11361:SF86 15 906 0.0 T 22-04-2016 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 SUPERFAMILY SSF55271 18 134 2.35E-38 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 SMART SM00533 309 625 6.6E-68 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 Gene3D G3DSA:3.40.50.300 602 839 2.7E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 Pfam PF05192 MutS domain III 295 593 6.9E-36 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NHAM_RS03190 5501e78dba5ecf92afe886210fb66178 907 PIRSF PIRSF037677 7 856 1.4E-149 T 22-04-2016 NHAM_RS01830 7060a429d861af2690c75e1be8e9a6f3 292 PANTHER PTHR11795:SF371 1 292 8.0E-86 T 22-04-2016 NHAM_RS01830 7060a429d861af2690c75e1be8e9a6f3 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 276 1.0E-34 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NHAM_RS01830 7060a429d861af2690c75e1be8e9a6f3 292 PANTHER PTHR11795 1 292 8.0E-86 T 22-04-2016 NHAM_RS02250 fd5d97e7b993672b7d3b05c58a15dd49 597 PANTHER PTHR32507 3 597 1.1E-245 T 22-04-2016 NHAM_RS02250 fd5d97e7b993672b7d3b05c58a15dd49 597 Pfam PF00999 Sodium/hydrogen exchanger family 11 387 6.1E-53 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NHAM_RS02250 fd5d97e7b993672b7d3b05c58a15dd49 597 PANTHER PTHR32507:SF7 3 597 1.1E-245 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 NHAM_RS02250 fd5d97e7b993672b7d3b05c58a15dd49 597 Gene3D G3DSA:3.30.465.10 495 573 2.1E-5 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NHAM_RS02250 fd5d97e7b993672b7d3b05c58a15dd49 597 Pfam PF03471 Transporter associated domain 495 567 5.2E-6 T 22-04-2016 IPR005170 Transporter-associated domain NHAM_RS02250 fd5d97e7b993672b7d3b05c58a15dd49 597 SMART SM01091 490 569 2.3E-6 T 22-04-2016 IPR005170 Transporter-associated domain NHAM_RS02250 fd5d97e7b993672b7d3b05c58a15dd49 597 SUPERFAMILY SSF56176 495 567 7.36E-6 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NHAM_RS14880 83589aa6fcb57590aa47b208d9c1e7d2 162 PANTHER PTHR30574 1 137 7.4E-30 T 22-04-2016 NHAM_RS14880 83589aa6fcb57590aa47b208d9c1e7d2 162 PANTHER PTHR30574:SF1 1 137 7.4E-30 T 22-04-2016 NHAM_RS01195 0278c5e9f4c2331a22ed076674f74379 334 Pfam PF00691 OmpA family 230 326 1.8E-18 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS01195 0278c5e9f4c2331a22ed076674f74379 334 PRINTS PR01021 OMPA domain signature 231 253 6.5E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NHAM_RS01195 0278c5e9f4c2331a22ed076674f74379 334 PRINTS PR01021 OMPA domain signature 276 292 6.5E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NHAM_RS01195 0278c5e9f4c2331a22ed076674f74379 334 PRINTS PR01021 OMPA domain signature 261 276 6.5E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NHAM_RS01195 0278c5e9f4c2331a22ed076674f74379 334 SUPERFAMILY SSF103088 222 331 7.98E-33 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS01195 0278c5e9f4c2331a22ed076674f74379 334 Pfam PF16234 Domain of unknown function (DUF4892) 50 156 3.8E-8 T 22-04-2016 IPR032608 Protein of unknown function DUF4892 NHAM_RS01195 0278c5e9f4c2331a22ed076674f74379 334 Gene3D G3DSA:3.30.1330.60 228 331 5.0E-34 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS01195 0278c5e9f4c2331a22ed076674f74379 334 PANTHER PTHR30128 229 331 1.3E-35 T 22-04-2016 NHAM_RS06785 8d7b30799ddc940aa7b5da2c5a2d325a 179 SUPERFAMILY SSF53254 1 175 2.14E-23 T 22-04-2016 IPR029033 Histidine phosphatase superfamily NHAM_RS06785 8d7b30799ddc940aa7b5da2c5a2d325a 179 PANTHER PTHR20935 1 113 1.2E-15 T 22-04-2016 NHAM_RS06785 8d7b30799ddc940aa7b5da2c5a2d325a 179 SMART SM00855 3 122 1.7E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 NHAM_RS06785 8d7b30799ddc940aa7b5da2c5a2d325a 179 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 74 1.5E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 NHAM_RS06785 8d7b30799ddc940aa7b5da2c5a2d325a 179 Gene3D G3DSA:3.40.50.1240 1 176 5.0E-51 T 22-04-2016 IPR029033 Histidine phosphatase superfamily NHAM_RS12520 5f793cd8424b2b4bfcdbe35c39fc4e73 313 Pfam PF05036 Sporulation related domain 225 307 2.9E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 NHAM_RS12520 5f793cd8424b2b4bfcdbe35c39fc4e73 313 Pfam PF01464 Transglycosylase SLT domain 56 163 9.9E-19 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 NHAM_RS12520 5f793cd8424b2b4bfcdbe35c39fc4e73 313 SUPERFAMILY SSF53955 43 172 2.81E-29 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS12520 5f793cd8424b2b4bfcdbe35c39fc4e73 313 PANTHER PTHR21666:SF203 34 244 7.4E-44 T 22-04-2016 NHAM_RS12520 5f793cd8424b2b4bfcdbe35c39fc4e73 313 PANTHER PTHR21666 34 244 7.4E-44 T 22-04-2016 NHAM_RS12520 5f793cd8424b2b4bfcdbe35c39fc4e73 313 Gene3D G3DSA:1.10.530.10 54 173 2.2E-30 T 22-04-2016 NHAM_RS19415 e1423b19f7d23ed6c5eac1dc5b8c2686 116 PANTHER PTHR33627:SF1 9 104 6.6E-12 T 22-04-2016 NHAM_RS19415 e1423b19f7d23ed6c5eac1dc5b8c2686 116 SUPERFAMILY SSF53098 17 91 1.67E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS19415 e1423b19f7d23ed6c5eac1dc5b8c2686 116 Pfam PF01609 Transposase DDE domain 18 77 1.7E-6 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS19415 e1423b19f7d23ed6c5eac1dc5b8c2686 116 PANTHER PTHR33627 9 104 6.6E-12 T 22-04-2016 NHAM_RS19490 05307412fe8cac520bf54b79be616b41 520 SMART SM00911 313 403 2.5E-23 T 22-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 NHAM_RS19490 05307412fe8cac520bf54b79be616b41 520 PANTHER PTHR41523:SF5 306 513 2.3E-31 T 22-04-2016 NHAM_RS19490 05307412fe8cac520bf54b79be616b41 520 PANTHER PTHR41523 306 513 2.3E-31 T 22-04-2016 NHAM_RS19490 05307412fe8cac520bf54b79be616b41 520 Pfam PF07536 HWE histidine kinase 313 402 2.6E-13 T 22-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 37 204 4.8E-54 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 Gene3D G3DSA:3.30.70.370 901 1014 4.3E-63 T 22-04-2016 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 Gene3D G3DSA:3.30.70.370 745 793 4.3E-63 T 22-04-2016 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PANTHER PTHR10133 6 316 0.0 T 22-04-2016 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PANTHER PTHR10133 389 1013 0.0 T 22-04-2016 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 SUPERFAMILY SSF53098 399 598 4.05E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 SUPERFAMILY SSF47807 205 319 6.58E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 Gene3D G3DSA:1.10.150.20 794 900 8.2E-31 T 22-04-2016 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 205 300 1.5E-31 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 SMART SM00279 207 242 2.0E-13 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 TIGRFAM TIGR00593 pola: DNA polymerase I 39 1014 1.1E-273 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 Gene3D G3DSA:3.40.50.1010 36 219 2.1E-67 T 22-04-2016 IPR029060 PIN domain-like NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 SUPERFAMILY SSF88723 35 204 2.24E-52 T 22-04-2016 IPR029060 PIN domain-like NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 Pfam PF01612 3'-5' exonuclease 403 598 2.2E-20 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 Gene3D G3DSA:1.10.150.20 220 280 4.2E-27 T 22-04-2016 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 Pfam PF00476 DNA polymerase family A 632 1012 5.6E-143 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 SMART SM00474 403 599 8.8E-16 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 SMART SM00482 768 974 3.1E-119 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 Gene3D G3DSA:3.30.420.10 402 623 2.9E-61 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PANTHER PTHR10133:SF27 6 316 0.0 T 22-04-2016 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PANTHER PTHR10133:SF27 389 1013 0.0 T 22-04-2016 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 SMART SM00475 36 296 1.9E-120 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 SUPERFAMILY SSF56672 604 1014 2.67E-148 T 22-04-2016 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 ProSitePatterns PS00447 DNA polymerase family A signature. 836 855 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PRINTS PR00868 DNA-polymerase family A (pol I) signature 836 861 9.2E-73 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PRINTS PR00868 DNA-polymerase family A (pol I) signature 927 943 9.2E-73 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PRINTS PR00868 DNA-polymerase family A (pol I) signature 782 805 9.2E-73 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PRINTS PR00868 DNA-polymerase family A (pol I) signature 760 775 9.2E-73 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PRINTS PR00868 DNA-polymerase family A (pol I) signature 812 825 9.2E-73 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PRINTS PR00868 DNA-polymerase family A (pol I) signature 957 970 9.2E-73 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PRINTS PR00868 DNA-polymerase family A (pol I) signature 895 906 9.2E-73 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PRINTS PR00868 DNA-polymerase family A (pol I) signature 737 759 9.2E-73 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 PRINTS PR00868 DNA-polymerase family A (pol I) signature 873 884 9.2E-73 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS02350 c8e8cc0f312bf69aea3fe18f102cbcf1 1014 Gene3D G3DSA:1.20.1060.10 624 744 9.4E-33 T 22-04-2016 NHAM_RS01850 d06809855d71fb3aed02e5d193dca1da 380 Pfam PF11563 Protoglobin 14 174 9.0E-18 T 22-04-2016 NHAM_RS01850 d06809855d71fb3aed02e5d193dca1da 380 SUPERFAMILY SSF46458 16 167 1.38E-14 T 22-04-2016 IPR009050 Globin-like NHAM_RS01850 d06809855d71fb3aed02e5d193dca1da 380 SUPERFAMILY SSF58104 181 370 1.29E-38 T 22-04-2016 NHAM_RS01850 d06809855d71fb3aed02e5d193dca1da 380 PANTHER PTHR32089 194 368 7.9E-28 T 22-04-2016 NHAM_RS01850 d06809855d71fb3aed02e5d193dca1da 380 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 224 367 3.0E-26 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NHAM_RS01850 d06809855d71fb3aed02e5d193dca1da 380 Gene3D G3DSA:1.10.490.10 17 168 2.0E-17 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 NHAM_RS01850 d06809855d71fb3aed02e5d193dca1da 380 SMART SM00283 152 375 9.5E-5 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NHAM_RS01850 d06809855d71fb3aed02e5d193dca1da 380 Gene3D G3DSA:1.10.287.950 194 377 3.7E-36 T 22-04-2016 NHAM_RS05410 6295619f98558ceb8dc3f82bb6fc289e 783 PANTHER PTHR22916 486 628 4.4E-26 T 22-04-2016 NHAM_RS05410 6295619f98558ceb8dc3f82bb6fc289e 783 PANTHER PTHR22916 645 752 4.4E-26 T 22-04-2016 NHAM_RS05410 6295619f98558ceb8dc3f82bb6fc289e 783 PANTHER PTHR22916:SF26 486 628 4.4E-26 T 22-04-2016 NHAM_RS05410 6295619f98558ceb8dc3f82bb6fc289e 783 PANTHER PTHR22916:SF26 645 752 4.4E-26 T 22-04-2016 NHAM_RS05410 6295619f98558ceb8dc3f82bb6fc289e 783 Pfam PF00535 Glycosyl transferase family 2 491 605 1.3E-12 T 22-04-2016 IPR001173 Glycosyltransferase 2-like NHAM_RS05410 6295619f98558ceb8dc3f82bb6fc289e 783 SUPERFAMILY SSF53448 488 732 3.28E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS05410 6295619f98558ceb8dc3f82bb6fc289e 783 Gene3D G3DSA:3.90.550.10 489 748 4.3E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS13315 538476a482d89182ba01e0fe89adc70b 230 Gene3D G3DSA:3.50.50.60 69 109 3.2E-4 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13315 538476a482d89182ba01e0fe89adc70b 230 PANTHER PTHR30388:SF4 6 20 2.9E-60 T 22-04-2016 NHAM_RS13315 538476a482d89182ba01e0fe89adc70b 230 PANTHER PTHR30388:SF4 42 223 2.9E-60 T 22-04-2016 NHAM_RS13315 538476a482d89182ba01e0fe89adc70b 230 PANTHER PTHR30388 6 20 2.9E-60 T 22-04-2016 NHAM_RS13315 538476a482d89182ba01e0fe89adc70b 230 PANTHER PTHR30388 42 223 2.9E-60 T 22-04-2016 NHAM_RS13315 538476a482d89182ba01e0fe89adc70b 230 Pfam PF13478 XdhC Rossmann domain 77 218 1.4E-43 T 22-04-2016 IPR027051 XdhC Rossmann domain NHAM_RS10510 e4d226ba90eddf19ec7f7b12d7947dc6 454 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 72 396 1.3E-69 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS10510 e4d226ba90eddf19ec7f7b12d7947dc6 454 PANTHER PTHR30469:SF12 20 407 4.4E-171 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA NHAM_RS10510 e4d226ba90eddf19ec7f7b12d7947dc6 454 SUPERFAMILY SSF111369 83 320 1.24E-58 T 22-04-2016 NHAM_RS10510 e4d226ba90eddf19ec7f7b12d7947dc6 454 Gene3D G3DSA:2.40.50.100 94 127 1.1E-19 T 22-04-2016 NHAM_RS10510 e4d226ba90eddf19ec7f7b12d7947dc6 454 Gene3D G3DSA:2.40.50.100 202 236 1.1E-19 T 22-04-2016 NHAM_RS10510 e4d226ba90eddf19ec7f7b12d7947dc6 454 PANTHER PTHR30469 20 407 4.4E-171 T 22-04-2016 NHAM_RS10510 e4d226ba90eddf19ec7f7b12d7947dc6 454 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 94 315 1.1E-10 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS07500 6564e1c05af996cf53ffe0659ed58a7f 170 SUPERFAMILY SSF50630 52 155 3.15E-15 T 22-04-2016 IPR021109 Aspartic peptidase domain NHAM_RS07500 6564e1c05af996cf53ffe0659ed58a7f 170 PANTHER PTHR41535 1 170 1.1E-39 T 22-04-2016 NHAM_RS07500 6564e1c05af996cf53ffe0659ed58a7f 170 Pfam PF13975 gag-polyprotein putative aspartyl protease 62 153 2.1E-23 T 22-04-2016 NHAM_RS07500 6564e1c05af996cf53ffe0659ed58a7f 170 PANTHER PTHR41535:SF1 1 170 1.1E-39 T 22-04-2016 NHAM_RS07500 6564e1c05af996cf53ffe0659ed58a7f 170 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 48 167 3.1E-42 T 22-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 Gene3D G3DSA:1.10.240.10 239 321 6.6E-37 T 22-04-2016 NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 168 183 1.3E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 48 70 1.3E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 222 234 1.3E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 189 211 1.3E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 Gene3D G3DSA:3.10.290.10 322 416 2.6E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 415 2.8E-104 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 PANTHER PTHR11766 1 416 1.6E-168 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 Gene3D G3DSA:3.40.50.620 4 238 1.7E-92 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 SUPERFAMILY SSF55174 335 416 4.94E-12 T 22-04-2016 NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 Pfam PF00579 tRNA synthetases class I (W and Y) 34 327 2.4E-67 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 6 417 41.053 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 NHAM_RS11880 5c69f2fb2df4f9f14ce3f837e2e51007 418 SUPERFAMILY SSF52374 7 326 5.06E-97 T 22-04-2016 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 6.2E-99 T 22-04-2016 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 6.2E-99 T 22-04-2016 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 6.2E-99 T 22-04-2016 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 155 180 6.2E-99 T 22-04-2016 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 6.2E-99 T 22-04-2016 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 6.2E-99 T 22-04-2016 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 181 204 6.2E-99 T 22-04-2016 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 6.2E-99 T 22-04-2016 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 6.2E-99 T 22-04-2016 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 ProSitePatterns PS00756 Protein secY signature 2. 174 191 - T 22-04-2016 IPR030659 SecY conserved site NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 Pfam PF00344 SecY translocase 81 417 3.4E-117 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 PIRSF PIRSF004557 1 441 1.8E-123 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 SUPERFAMILY SSF103491 15 424 4.45E-131 T 22-04-2016 IPR023201 SecY subunit domain NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 PANTHER PTHR10906 13 443 4.4E-209 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 PANTHER PTHR10906:SF2 13 443 4.4E-209 T 22-04-2016 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 Gene3D G3DSA:1.10.3370.10 17 437 5.2E-164 T 22-04-2016 IPR023201 SecY subunit domain NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 429 5.6E-130 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 NHAM_RS08010 3e14a8fbad201dbfcc4f2a270e65179d 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 433 29.634 T 22-04-2016 IPR026593 Protein translocase subunit SecY NHAM_RS16555 5b1f0770dd2a2e179793f262f164a602 356 PANTHER PTHR21320:SF0 49 227 1.9E-46 T 22-04-2016 NHAM_RS16555 5b1f0770dd2a2e179793f262f164a602 356 PANTHER PTHR21320:SF0 256 356 1.9E-46 T 22-04-2016 NHAM_RS16555 5b1f0770dd2a2e179793f262f164a602 356 PANTHER PTHR21320 49 227 1.9E-46 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS16555 5b1f0770dd2a2e179793f262f164a602 356 PANTHER PTHR21320 256 356 1.9E-46 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS16555 5b1f0770dd2a2e179793f262f164a602 356 Pfam PF09243 Mitochondrial small ribosomal subunit Rsm22 257 350 1.9E-24 T 22-04-2016 IPR015324 Ribosomal protein Rsm22, bacterial-type GO:0006412|GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NHAM_RS16555 5b1f0770dd2a2e179793f262f164a602 356 Pfam PF09243 Mitochondrial small ribosomal subunit Rsm22 50 228 6.4E-51 T 22-04-2016 IPR015324 Ribosomal protein Rsm22, bacterial-type GO:0006412|GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NHAM_RS16555 5b1f0770dd2a2e179793f262f164a602 356 Gene3D G3DSA:3.40.50.150 74 210 7.6E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS16555 5b1f0770dd2a2e179793f262f164a602 356 SUPERFAMILY SSF53335 71 197 1.17E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS12730 bee5f6b5767838be906e0eb858a9d06e 395 Pfam PF04860 Phage portal protein 51 374 5.5E-76 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein NHAM_RS12730 bee5f6b5767838be906e0eb858a9d06e 395 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 41 380 2.2E-56 T 22-04-2016 IPR006427 Phage portal protein, HK97 NHAM_RS16955 929641277114e9b2a03c7ed0afeff5a2 119 PANTHER PTHR36505:SF1 13 118 2.5E-18 T 22-04-2016 NHAM_RS16955 929641277114e9b2a03c7ed0afeff5a2 119 SUPERFAMILY SSF50346 3 104 1.37E-20 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS16955 929641277114e9b2a03c7ed0afeff5a2 119 Pfam PF05239 PRC-barrel domain 14 72 2.8E-13 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS16955 929641277114e9b2a03c7ed0afeff5a2 119 Gene3D G3DSA:2.30.30.240 14 71 6.2E-14 T 22-04-2016 NHAM_RS16955 929641277114e9b2a03c7ed0afeff5a2 119 PANTHER PTHR36505 13 118 2.5E-18 T 22-04-2016 NHAM_RS03400 2bce4d6a5952e6f266a12189d19f1f1b 191 Gene3D G3DSA:1.10.10.10 14 101 1.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03400 2bce4d6a5952e6f266a12189d19f1f1b 191 SUPERFAMILY SSF46785 13 132 1.01E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03400 2bce4d6a5952e6f266a12189d19f1f1b 191 SMART SM00347 21 123 1.6E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS03400 2bce4d6a5952e6f266a12189d19f1f1b 191 Pfam PF12802 MarR family 27 87 1.1E-9 T 22-04-2016 NHAM_RS10290 e7a3126c73ad259ee003a6ad9eb17be4 542 PANTHER PTHR41287 26 537 2.9E-72 T 22-04-2016 NHAM_RS10290 e7a3126c73ad259ee003a6ad9eb17be4 542 Pfam PF03354 Phage Terminase 50 518 3.9E-49 T 22-04-2016 IPR005021 Phage terminase NHAM_RS06510 68794490a531322bfab96485167d6ce0 368 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 76 88 5.7E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS06510 68794490a531322bfab96485167d6ce0 368 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 45 368 6.5E-127 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS06510 68794490a531322bfab96485167d6ce0 368 Pfam PF00953 Glycosyl transferase family 4 107 292 8.9E-34 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS06510 68794490a531322bfab96485167d6ce0 368 ProSitePatterns PS01348 MraY family signature 2. 197 208 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS06510 68794490a531322bfab96485167d6ce0 368 ProSitePatterns PS01347 MraY family signature 1. 76 88 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS06510 68794490a531322bfab96485167d6ce0 368 PANTHER PTHR22926 2 368 4.7E-158 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS06510 68794490a531322bfab96485167d6ce0 368 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 31 366 24.416 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS06510 68794490a531322bfab96485167d6ce0 368 PANTHER PTHR22926:SF5 2 368 4.7E-158 T 22-04-2016 NHAM_RS08865 2843449d21eb532203cfea737d090142 337 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 6 334 38.858 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 NHAM_RS08865 2843449d21eb532203cfea737d090142 337 SUPERFAMILY SSF47648 5 70 5.1E-20 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain NHAM_RS08865 2843449d21eb532203cfea737d090142 337 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 66 1.2E-19 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain NHAM_RS08865 2843449d21eb532203cfea737d090142 337 Gene3D G3DSA:3.40.1030.10 73 336 1.2E-107 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 NHAM_RS08865 2843449d21eb532203cfea737d090142 337 Pfam PF00591 Glycosyl transferase family, a/b domain 75 324 2.7E-95 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 NHAM_RS08865 2843449d21eb532203cfea737d090142 337 PANTHER PTHR11922 75 336 4.3E-120 T 22-04-2016 NHAM_RS08865 2843449d21eb532203cfea737d090142 337 Gene3D G3DSA:1.20.970.10 6 70 1.3E-25 T 22-04-2016 NHAM_RS08865 2843449d21eb532203cfea737d090142 337 PANTHER PTHR11922:SF5 75 336 4.3E-120 T 22-04-2016 NHAM_RS08865 2843449d21eb532203cfea737d090142 337 SUPERFAMILY SSF52418 76 337 6.41E-97 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 NHAM_RS08865 2843449d21eb532203cfea737d090142 337 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 333 9.2E-120 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 NHAM_RS04740 171614aa1e4355af32650c8ed61b9252 448 SUPERFAMILY SSF51182 20 446 8.91E-171 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS04740 171614aa1e4355af32650c8ed61b9252 448 Gene3D G3DSA:2.60.120.10 296 413 2.4E-67 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS04740 171614aa1e4355af32650c8ed61b9252 448 Gene3D G3DSA:2.60.120.10 211 235 2.4E-67 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS04740 171614aa1e4355af32650c8ed61b9252 448 Pfam PF04209 homogentisate 1,2-dioxygenase 21 443 2.0E-206 T 22-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 NHAM_RS04740 171614aa1e4355af32650c8ed61b9252 448 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 20 443 3.2E-205 T 22-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 NHAM_RS04740 171614aa1e4355af32650c8ed61b9252 448 PANTHER PTHR11056 7 448 2.1E-243 T 22-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 NHAM_RS04740 171614aa1e4355af32650c8ed61b9252 448 Gene3D G3DSA:2.60.120.10 142 210 3.0E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS04740 171614aa1e4355af32650c8ed61b9252 448 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 20 445 72.561 T 22-04-2016 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 NHAM_RS19325 3593e0cc39c72b6d3d3e5df85f56f112 689 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 292 3.5E-53 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NHAM_RS19325 3593e0cc39c72b6d3d3e5df85f56f112 689 PANTHER PTHR11070:SF3 7 622 0.0 T 22-04-2016 NHAM_RS19325 3593e0cc39c72b6d3d3e5df85f56f112 689 Gene3D G3DSA:3.40.50.300 558 630 4.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19325 3593e0cc39c72b6d3d3e5df85f56f112 689 Gene3D G3DSA:3.40.50.300 303 410 4.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19325 3593e0cc39c72b6d3d3e5df85f56f112 689 Gene3D G3DSA:3.40.50.300 9 293 6.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19325 3593e0cc39c72b6d3d3e5df85f56f112 689 PANTHER PTHR11070 7 622 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NHAM_RS19325 3593e0cc39c72b6d3d3e5df85f56f112 689 Gene3D G3DSA:1.10.486.10 411 536 5.6E-9 T 22-04-2016 NHAM_RS19325 3593e0cc39c72b6d3d3e5df85f56f112 689 SUPERFAMILY SSF52540 5 629 9.61E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19325 3593e0cc39c72b6d3d3e5df85f56f112 689 Pfam PF13361 UvrD-like helicase C-terminal domain 299 453 1.4E-23 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NHAM_RS19325 3593e0cc39c72b6d3d3e5df85f56f112 689 Pfam PF13361 UvrD-like helicase C-terminal domain 558 618 1.0E-16 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NHAM_RS03410 a710a17546b85ddea3096de6019b231e 671 Pfam PF01551 Peptidase family M23 518 614 1.5E-31 T 22-04-2016 IPR016047 Peptidase M23 NHAM_RS03410 a710a17546b85ddea3096de6019b231e 671 SUPERFAMILY SSF51261 399 616 5.02E-63 T 22-04-2016 IPR011055 Duplicated hybrid motif NHAM_RS03410 a710a17546b85ddea3096de6019b231e 671 Gene3D G3DSA:2.70.70.10 474 617 8.4E-46 T 22-04-2016 NHAM_RS03410 a710a17546b85ddea3096de6019b231e 671 PANTHER PTHR21666 462 627 4.7E-45 T 22-04-2016 NHAM_RS01020 fd2e7f0f40b0d81717f9c794a02e54f0 465 SUPERFAMILY SSF53448 276 448 4.39E-17 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS01020 fd2e7f0f40b0d81717f9c794a02e54f0 465 Pfam PF13641 Glycosyltransferase like family 2 294 457 4.4E-14 T 22-04-2016 NHAM_RS01020 fd2e7f0f40b0d81717f9c794a02e54f0 465 PANTHER PTHR10587 240 450 1.1E-27 T 22-04-2016 NHAM_RS01020 fd2e7f0f40b0d81717f9c794a02e54f0 465 PANTHER PTHR10587:SF79 240 450 1.1E-27 T 22-04-2016 NHAM_RS01020 fd2e7f0f40b0d81717f9c794a02e54f0 465 Gene3D G3DSA:3.90.550.10 296 414 1.3E-4 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS01020 fd2e7f0f40b0d81717f9c794a02e54f0 465 SUPERFAMILY SSF160246 71 156 2.62E-5 T 22-04-2016 NHAM_RS16205 c625be6711874dbed5be9cfa6a0facb4 131 Pfam PF00072 Response regulator receiver domain 9 122 2.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS16205 c625be6711874dbed5be9cfa6a0facb4 131 Gene3D G3DSA:3.40.50.2300 6 125 3.3E-34 T 22-04-2016 NHAM_RS16205 c625be6711874dbed5be9cfa6a0facb4 131 SMART SM00448 7 121 9.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS16205 c625be6711874dbed5be9cfa6a0facb4 131 SUPERFAMILY SSF52172 7 125 1.99E-32 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS16205 c625be6711874dbed5be9cfa6a0facb4 131 PANTHER PTHR26402 7 125 3.7E-36 T 22-04-2016 NHAM_RS20210 d95b3a2ff0369ddcf9351daa8094697f 338 PANTHER PTHR33055:SF2 2 335 1.6E-132 T 22-04-2016 NHAM_RS20210 d95b3a2ff0369ddcf9351daa8094697f 338 PANTHER PTHR33055 2 335 1.6E-132 T 22-04-2016 NHAM_RS20210 d95b3a2ff0369ddcf9351daa8094697f 338 Pfam PF01548 Transposase 6 144 5.5E-14 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS20210 d95b3a2ff0369ddcf9351daa8094697f 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 290 7.4E-24 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS10295 51a37a02bd9057ee7c7894e5135b70a0 137 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 23 133 6.7E-23 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family NHAM_RS10295 51a37a02bd9057ee7c7894e5135b70a0 137 Pfam PF05119 Phage terminase, small subunit 32 127 1.0E-23 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family NHAM_RS13915 7fdf7b1a2a1ba0b1e5042f9635e3dcb6 520 Pfam PF00682 HMGL-like 12 280 1.9E-90 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 NHAM_RS13915 7fdf7b1a2a1ba0b1e5042f9635e3dcb6 520 SMART SM00917 376 506 1.8E-39 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NHAM_RS13915 7fdf7b1a2a1ba0b1e5042f9635e3dcb6 520 PANTHER PTHR10277 2 514 1.8E-249 T 22-04-2016 NHAM_RS13915 7fdf7b1a2a1ba0b1e5042f9635e3dcb6 520 Gene3D G3DSA:3.20.20.70 4 354 9.4E-144 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS13915 7fdf7b1a2a1ba0b1e5042f9635e3dcb6 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 9 515 41.696 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NHAM_RS13915 7fdf7b1a2a1ba0b1e5042f9635e3dcb6 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NHAM_RS13915 7fdf7b1a2a1ba0b1e5042f9635e3dcb6 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 11 503 2.0E-207 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NHAM_RS13915 7fdf7b1a2a1ba0b1e5042f9635e3dcb6 520 PANTHER PTHR10277:SF9 2 514 1.8E-249 T 22-04-2016 NHAM_RS13915 7fdf7b1a2a1ba0b1e5042f9635e3dcb6 520 SUPERFAMILY SSF51569 7 298 1.15E-96 T 22-04-2016 NHAM_RS13915 7fdf7b1a2a1ba0b1e5042f9635e3dcb6 520 SUPERFAMILY SSF110921 399 505 4.05E-24 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NHAM_RS13915 7fdf7b1a2a1ba0b1e5042f9635e3dcb6 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 206 219 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NHAM_RS13915 7fdf7b1a2a1ba0b1e5042f9635e3dcb6 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 377 505 2.0E-38 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 NHAM_RS07345 29089a95142ce475a84a7c548fa5a210 162 SUPERFAMILY SSF82093 29 135 4.19E-37 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 NHAM_RS07345 29089a95142ce475a84a7c548fa5a210 162 PANTHER PTHR34128 3 162 2.6E-62 T 22-04-2016 NHAM_RS07345 29089a95142ce475a84a7c548fa5a210 162 Pfam PF03100 CcmE 3 129 2.5E-43 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 NHAM_RS07345 29089a95142ce475a84a7c548fa5a210 162 PANTHER PTHR34128:SF1 3 162 2.6E-62 T 22-04-2016 NHAM_RS07345 29089a95142ce475a84a7c548fa5a210 162 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 139 32.362 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 NHAM_RS07345 29089a95142ce475a84a7c548fa5a210 162 Gene3D G3DSA:2.40.50.140 25 123 2.8E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS19240 84c8f6f5e11b0bbddc8ccde8f6f4a505 361 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 4 329 1.5E-92 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NHAM_RS19240 84c8f6f5e11b0bbddc8ccde8f6f4a505 361 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NHAM_RS19240 84c8f6f5e11b0bbddc8ccde8f6f4a505 361 PIRSF PIRSF001359 1 329 3.2E-78 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NHAM_RS19240 84c8f6f5e11b0bbddc8ccde8f6f4a505 361 Gene3D G3DSA:3.20.20.70 1 335 3.3E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS19240 84c8f6f5e11b0bbddc8ccde8f6f4a505 361 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 9.6E-89 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NHAM_RS19240 84c8f6f5e11b0bbddc8ccde8f6f4a505 361 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 2.5E-185 T 22-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 NHAM_RS19240 84c8f6f5e11b0bbddc8ccde8f6f4a505 361 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 72 85 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NHAM_RS19240 84c8f6f5e11b0bbddc8ccde8f6f4a505 361 PANTHER PTHR30304 1 352 5.0E-111 T 22-04-2016 NHAM_RS19240 84c8f6f5e11b0bbddc8ccde8f6f4a505 361 SUPERFAMILY SSF51569 3 328 2.78E-99 T 22-04-2016 NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 Pfam PF13298 DNA polymerase Ligase (LigD) 38 141 4.2E-37 T 22-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 Gene3D G3DSA:3.30.1490.70 258 287 2.5E-18 T 22-04-2016 NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 Gene3D G3DSA:3.30.1490.70 405 447 2.5E-18 T 22-04-2016 NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 266 563 7.3E-98 T 22-04-2016 IPR014146 DNA ligase D, ligase domain NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 Pfam PF04679 ATP dependent DNA ligase C terminal region 463 557 5.6E-20 T 22-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 SUPERFAMILY SSF50249 453 563 8.0E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 274 889 1.4E-216 T 22-04-2016 IPR014143 DNA ligase D NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 PANTHER PTHR10459:SF70 253 711 8.4E-116 T 22-04-2016 NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 6 162 8.1E-71 T 22-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 612 862 5.6E-93 T 22-04-2016 IPR014145 DNA ligase D, polymerase domain NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 PANTHER PTHR10459 253 711 8.4E-116 T 22-04-2016 NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 Gene3D G3DSA:2.40.50.140 452 564 7.0E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 Pfam PF01068 ATP dependent DNA ligase domain 278 447 3.7E-24 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 Gene3D G3DSA:3.30.470.30 288 392 2.4E-26 T 22-04-2016 NHAM_RS02330 68cadd1dae867ff69d9ad89ae9a5c00d 904 SUPERFAMILY SSF56091 271 447 6.48E-46 T 22-04-2016 NHAM_RS13805 22b7ab6051cd10bcd27c5099ee0c55e9 406 SUPERFAMILY SSF53474 182 252 4.67E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS13805 22b7ab6051cd10bcd27c5099ee0c55e9 406 SUPERFAMILY SSF53474 2 138 4.67E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS13805 22b7ab6051cd10bcd27c5099ee0c55e9 406 Pfam PF02566 OsmC-like protein 298 401 9.4E-18 T 22-04-2016 IPR003718 OsmC/Ohr family NHAM_RS13805 22b7ab6051cd10bcd27c5099ee0c55e9 406 Pfam PF12146 Serine aminopeptidase, S33 47 133 6.7E-12 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 NHAM_RS13805 22b7ab6051cd10bcd27c5099ee0c55e9 406 SUPERFAMILY SSF82784 228 402 9.03E-43 T 22-04-2016 IPR003718 OsmC/Ohr family NHAM_RS13805 22b7ab6051cd10bcd27c5099ee0c55e9 406 PANTHER PTHR11614:SF108 1 270 1.0E-115 T 22-04-2016 NHAM_RS13805 22b7ab6051cd10bcd27c5099ee0c55e9 406 Gene3D G3DSA:3.40.50.1820 180 251 1.5E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS13805 22b7ab6051cd10bcd27c5099ee0c55e9 406 Gene3D G3DSA:3.40.50.1820 2 136 1.5E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS13805 22b7ab6051cd10bcd27c5099ee0c55e9 406 PANTHER PTHR11614 1 270 1.0E-115 T 22-04-2016 NHAM_RS13805 22b7ab6051cd10bcd27c5099ee0c55e9 406 Gene3D G3DSA:3.30.300.20 268 403 1.5E-44 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta NHAM_RS08035 d45acd779c400cb46d83d22330f0d446 138 Pfam PF01196 Ribosomal protein L17 20 116 8.2E-37 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08035 d45acd779c400cb46d83d22330f0d446 138 Gene3D G3DSA:3.90.1030.10 1 117 3.1E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08035 d45acd779c400cb46d83d22330f0d446 138 PANTHER PTHR14413 1 129 2.2E-69 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08035 d45acd779c400cb46d83d22330f0d446 138 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 1.3E-43 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08035 d45acd779c400cb46d83d22330f0d446 138 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08035 d45acd779c400cb46d83d22330f0d446 138 PANTHER PTHR14413:SF5 1 129 2.2E-69 T 22-04-2016 NHAM_RS08035 d45acd779c400cb46d83d22330f0d446 138 SUPERFAMILY SSF64263 1 119 2.88E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08035 d45acd779c400cb46d83d22330f0d446 138 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.778 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS17600 b57c66f5f9d9ca1acb70e76c78d55ba8 124 TIGRFAM TIGR00494 crcB: protein CrcB 4 119 6.5E-27 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 NHAM_RS17600 b57c66f5f9d9ca1acb70e76c78d55ba8 124 PANTHER PTHR28259 1 121 4.3E-30 T 22-04-2016 NHAM_RS17600 b57c66f5f9d9ca1acb70e76c78d55ba8 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 121 18.706 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 NHAM_RS17600 b57c66f5f9d9ca1acb70e76c78d55ba8 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 116 1.2E-20 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 NHAM_RS07200 12ec3428a6c1a3816d48bb186d6c671e 95 PANTHER PTHR34477 1 93 2.9E-47 T 22-04-2016 NHAM_RS07200 12ec3428a6c1a3816d48bb186d6c671e 95 Pfam PF01541 GIY-YIG catalytic domain 3 75 8.5E-15 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily NHAM_RS07200 12ec3428a6c1a3816d48bb186d6c671e 95 PANTHER PTHR34477:SF2 1 93 2.9E-47 T 22-04-2016 NHAM_RS07200 12ec3428a6c1a3816d48bb186d6c671e 95 Gene3D G3DSA:3.40.1440.10 4 75 2.7E-5 T 22-04-2016 IPR027299 GIY-YIG domain NHAM_RS07200 12ec3428a6c1a3816d48bb186d6c671e 95 SUPERFAMILY SSF82771 1 88 1.01E-20 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily NHAM_RS07200 12ec3428a6c1a3816d48bb186d6c671e 95 SMART SM00465 2 80 6.7E-4 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily NHAM_RS20325 7ab85fb85d96205facbda58645f5cc4f 424 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 29 381 1.6E-78 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 NHAM_RS20325 7ab85fb85d96205facbda58645f5cc4f 424 Pfam PF01546 Peptidase family M20/M25/M40 81 374 2.9E-20 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NHAM_RS20325 7ab85fb85d96205facbda58645f5cc4f 424 PIRSF PIRSF005962 10 421 1.7E-95 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 NHAM_RS20325 7ab85fb85d96205facbda58645f5cc4f 424 PANTHER PTHR11014:SF89 21 409 2.6E-137 T 22-04-2016 NHAM_RS20325 7ab85fb85d96205facbda58645f5cc4f 424 SUPERFAMILY SSF53187 19 216 1.38E-71 T 22-04-2016 NHAM_RS20325 7ab85fb85d96205facbda58645f5cc4f 424 SUPERFAMILY SSF53187 319 421 1.38E-71 T 22-04-2016 NHAM_RS20325 7ab85fb85d96205facbda58645f5cc4f 424 Gene3D G3DSA:3.30.70.360 201 318 1.3E-33 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS20325 7ab85fb85d96205facbda58645f5cc4f 424 SUPERFAMILY SSF55031 203 305 1.83E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS20325 7ab85fb85d96205facbda58645f5cc4f 424 Pfam PF07687 Peptidase dimerisation domain 205 301 1.4E-9 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS20325 7ab85fb85d96205facbda58645f5cc4f 424 Gene3D G3DSA:3.40.630.10 8 197 2.6E-84 T 22-04-2016 NHAM_RS20325 7ab85fb85d96205facbda58645f5cc4f 424 Gene3D G3DSA:3.40.630.10 319 421 2.6E-84 T 22-04-2016 NHAM_RS20325 7ab85fb85d96205facbda58645f5cc4f 424 PANTHER PTHR11014 21 409 2.6E-137 T 22-04-2016 NHAM_RS05100 5a443da1eefc5c79d7664b0dc68dccb3 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 146 195 4.5E-15 T 22-04-2016 IPR007136 Protein of unknown function DUF347 NHAM_RS05100 5a443da1eefc5c79d7664b0dc68dccb3 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 201 250 1.7E-11 T 22-04-2016 IPR007136 Protein of unknown function DUF347 NHAM_RS05100 5a443da1eefc5c79d7664b0dc68dccb3 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 19 76 4.5E-17 T 22-04-2016 IPR007136 Protein of unknown function DUF347 NHAM_RS05100 5a443da1eefc5c79d7664b0dc68dccb3 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 81 129 3.2E-13 T 22-04-2016 IPR007136 Protein of unknown function DUF347 NHAM_RS00850 48093ad74fdcdcf92a439e715fe4e95d 613 PANTHER PTHR21000 1 371 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS00850 48093ad74fdcdcf92a439e715fe4e95d 613 PANTHER PTHR21000 406 609 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS00850 48093ad74fdcdcf92a439e715fe4e95d 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 44.383 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS00850 48093ad74fdcdcf92a439e715fe4e95d 613 SUPERFAMILY SSF52016 421 609 2.75E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NHAM_RS00850 48093ad74fdcdcf92a439e715fe4e95d 613 Pfam PF00920 Dehydratase family 34 607 2.0E-215 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS00850 48093ad74fdcdcf92a439e715fe4e95d 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS00850 48093ad74fdcdcf92a439e715fe4e95d 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 609 3.4E-245 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS00850 48093ad74fdcdcf92a439e715fe4e95d 613 SUPERFAMILY SSF143975 4 420 4.97E-131 T 22-04-2016 NHAM_RS00850 48093ad74fdcdcf92a439e715fe4e95d 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS00850 48093ad74fdcdcf92a439e715fe4e95d 613 PANTHER PTHR21000:SF11 1 371 0.0 T 22-04-2016 NHAM_RS00850 48093ad74fdcdcf92a439e715fe4e95d 613 PANTHER PTHR21000:SF11 406 609 0.0 T 22-04-2016 NHAM_RS07060 0f31acbf36ea6a18731741fca9cc5db8 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 3 259 7.1E-115 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 NHAM_RS07060 0f31acbf36ea6a18731741fca9cc5db8 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 7.5E-22 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NHAM_RS07060 0f31acbf36ea6a18731741fca9cc5db8 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site NHAM_RS07060 0f31acbf36ea6a18731741fca9cc5db8 262 PANTHER PTHR30435:SF19 1 262 4.0E-110 T 22-04-2016 NHAM_RS07060 0f31acbf36ea6a18731741fca9cc5db8 262 PANTHER PTHR30435 1 262 4.0E-110 T 22-04-2016 NHAM_RS07060 0f31acbf36ea6a18731741fca9cc5db8 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 137 9.0E-48 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G NHAM_RS07060 0f31acbf36ea6a18731741fca9cc5db8 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 1.4E-27 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G NHAM_RS07060 0f31acbf36ea6a18731741fca9cc5db8 262 SUPERFAMILY SSF117143 92 221 1.07E-34 T 22-04-2016 NHAM_RS07060 0f31acbf36ea6a18731741fca9cc5db8 262 Pfam PF00460 Flagella basal body rod protein 4 34 7.1E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 NHAM_RS01260 2e9a4efd1d6bee0f8b59a5c8d42b0e8a 456 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 50 360 5.4E-107 T 22-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 NHAM_RS01260 2e9a4efd1d6bee0f8b59a5c8d42b0e8a 456 PANTHER PTHR34378:SF2 4 456 7.3E-237 T 22-04-2016 NHAM_RS01260 2e9a4efd1d6bee0f8b59a5c8d42b0e8a 456 PIRSF PIRSF017901 1 456 5.7E-178 T 22-04-2016 NHAM_RS01260 2e9a4efd1d6bee0f8b59a5c8d42b0e8a 456 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 10 456 4.5E-200 T 22-04-2016 IPR011556 Glutamate--cysteine ligase, plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 NHAM_RS01260 2e9a4efd1d6bee0f8b59a5c8d42b0e8a 456 PANTHER PTHR34378 4 456 7.3E-237 T 22-04-2016 NHAM_RS01260 2e9a4efd1d6bee0f8b59a5c8d42b0e8a 456 SUPERFAMILY SSF55931 306 454 6.96E-70 T 22-04-2016 NHAM_RS01260 2e9a4efd1d6bee0f8b59a5c8d42b0e8a 456 SUPERFAMILY SSF55931 25 267 6.96E-70 T 22-04-2016 NHAM_RS09245 e857e632b24de0c93664f2a0c9165c59 93 PANTHER PTHR31435 3 92 6.4E-26 T 22-04-2016 NHAM_RS09245 e857e632b24de0c93664f2a0c9165c59 93 Pfam PF14542 GCN5-related N-acetyl-transferase 12 88 6.4E-25 T 22-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase NHAM_RS09245 e857e632b24de0c93664f2a0c9165c59 93 Gene3D G3DSA:3.40.630.30 3 90 1.5E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS09245 e857e632b24de0c93664f2a0c9165c59 93 SUPERFAMILY SSF55729 1 90 5.22E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS18775 89929dc20ec2cbd76cffdfc07aad0e76 403 SMART SM00052 146 389 6.2E-31 T 22-04-2016 IPR001633 EAL domain NHAM_RS18775 89929dc20ec2cbd76cffdfc07aad0e76 403 PANTHER PTHR33121:SF13 152 393 2.0E-54 T 22-04-2016 NHAM_RS18775 89929dc20ec2cbd76cffdfc07aad0e76 403 Pfam PF00563 EAL domain 154 383 1.6E-47 T 22-04-2016 IPR001633 EAL domain NHAM_RS18775 89929dc20ec2cbd76cffdfc07aad0e76 403 PANTHER PTHR33121 152 393 2.0E-54 T 22-04-2016 NHAM_RS18775 89929dc20ec2cbd76cffdfc07aad0e76 403 Gene3D G3DSA:3.20.20.450 154 392 3.4E-46 T 22-04-2016 IPR001633 EAL domain NHAM_RS18775 89929dc20ec2cbd76cffdfc07aad0e76 403 SUPERFAMILY SSF141868 154 394 3.79E-47 T 22-04-2016 IPR001633 EAL domain NHAM_RS18775 89929dc20ec2cbd76cffdfc07aad0e76 403 Gene3D G3DSA:3.40.50.2300 22 88 3.9E-5 T 22-04-2016 NHAM_RS18775 89929dc20ec2cbd76cffdfc07aad0e76 403 SUPERFAMILY SSF52172 22 149 3.13E-7 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS16020 22748e088776418b524e1526c0854843 232 Pfam PF11748 Protein of unknown function (DUF3306) 5 116 5.0E-23 T 22-04-2016 IPR021735 Protein of unknown function DUF3306 NHAM_RS00355 820e9c23224082c538ca1ae353ed3902 223 SUPERFAMILY SSF52402 1 222 1.54E-59 T 22-04-2016 NHAM_RS00355 820e9c23224082c538ca1ae353ed3902 223 PANTHER PTHR12196 121 209 6.7E-12 T 22-04-2016 IPR030662 Diphthine--ammonia ligase/Uncharacterised protein MJ0570 MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 NHAM_RS00355 820e9c23224082c538ca1ae353ed3902 223 Gene3D G3DSA:3.90.1490.10 148 217 6.9E-17 T 22-04-2016 NHAM_RS00355 820e9c23224082c538ca1ae353ed3902 223 Gene3D G3DSA:3.40.50.620 3 146 7.9E-25 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS00355 820e9c23224082c538ca1ae353ed3902 223 Pfam PF01902 Diphthamide synthase 7 219 1.9E-24 T 22-04-2016 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 SUPERFAMILY SSF55186 552 717 8.89E-48 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 PANTHER PTHR11777:SF9 1 890 0.0 T 22-04-2016 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 Gene3D G3DSA:3.30.930.10 4 242 1.6E-113 T 22-04-2016 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 SUPERFAMILY SSF101353 246 461 2.09E-61 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 Pfam PF02272 DHHA1 domain 816 885 6.4E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 Pfam PF01411 tRNA synthetases class II (A) 6 555 5.8E-219 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 SMART SM00863 653 708 7.1E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 872 1.4E-288 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 SUPERFAMILY SSF50447 453 551 2.09E-20 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 708 2.0E-17 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 PANTHER PTHR11777 1 890 0.0 T 22-04-2016 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 9.1E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 9.1E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 9.1E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 9.1E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 9.1E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 891 198.639 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 NHAM_RS08285 8e2da43628b34ed9e6629540796adfeb 891 SUPERFAMILY SSF55681 4 245 3.98E-109 T 22-04-2016 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 PANTHER PTHR23389 16 564 9.7E-187 T 22-04-2016 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 SMART SM00292 638 714 1.4E-9 T 22-04-2016 IPR001357 BRCT domain NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 Gene3D G3DSA:3.30.470.30 136 268 1.7E-51 T 22-04-2016 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 Gene3D G3DSA:1.10.287.610 11 81 3.4E-26 T 22-04-2016 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 28 708 2.6E-240 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 Gene3D G3DSA:3.40.50.10190 638 713 2.1E-23 T 22-04-2016 IPR001357 BRCT domain NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 Gene3D G3DSA:1.10.150.20 462 533 6.7E-24 T 22-04-2016 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 SMART SM00278 511 530 11.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 SMART SM00278 591 610 140.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 SMART SM00278 543 562 2500.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 PIRSF PIRSF001604 12 714 6.3E-237 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 Gene3D G3DSA:2.40.50.140 335 418 4.7E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 SUPERFAMILY SSF52113 638 713 5.98E-18 T 22-04-2016 IPR001357 BRCT domain NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 347 362 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 337 425 5.9E-32 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 Gene3D G3DSA:1.10.150.20 535 625 1.5E-24 T 22-04-2016 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 19 334 4.4E-125 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 434 461 1.9E-12 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 132 161 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 642 712 5.8E-12 T 22-04-2016 IPR001357 BRCT domain NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 SUPERFAMILY SSF50249 333 428 5.14E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 Hamap MF_01588 DNA ligase [ligA]. 17 712 51.247 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 SUPERFAMILY SSF47781 431 625 3.26E-50 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 Pfam PF12826 Helix-hairpin-helix motif 541 575 4.9E-10 T 22-04-2016 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 SMART SM00532 18 475 8.7E-259 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 PANTHER PTHR23389:SF9 16 564 9.7E-187 T 22-04-2016 NHAM_RS06585 fcb2bff085e51b51b229e9ad129d97e8 714 SUPERFAMILY SSF56091 15 331 2.52E-119 T 22-04-2016 NHAM_RS16050 b6fac19aa516b7771cd3469639f14968 80 Gene3D G3DSA:3.30.110.40 4 73 2.8E-22 T 22-04-2016 IPR001455 TusA-like domain NHAM_RS16050 b6fac19aa516b7771cd3469639f14968 80 SUPERFAMILY SSF64307 5 73 1.14E-20 T 22-04-2016 IPR001455 TusA-like domain NHAM_RS16050 b6fac19aa516b7771cd3469639f14968 80 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 22-04-2016 IPR001455 TusA-like domain NHAM_RS16050 b6fac19aa516b7771cd3469639f14968 80 PANTHER PTHR33279 6 78 7.1E-17 T 22-04-2016 NHAM_RS16050 b6fac19aa516b7771cd3469639f14968 80 Pfam PF01206 Sulfurtransferase TusA 5 73 9.9E-19 T 22-04-2016 IPR001455 TusA-like domain NHAM_RS19555 7bcbc217e2504ebf148075bc88ba7cb3 122 Pfam PF00665 Integrase core domain 10 122 3.0E-29 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS19555 7bcbc217e2504ebf148075bc88ba7cb3 122 PANTHER PTHR32552 10 100 2.5E-13 T 22-04-2016 NHAM_RS19555 7bcbc217e2504ebf148075bc88ba7cb3 122 Gene3D G3DSA:3.30.420.10 10 122 1.8E-28 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS19555 7bcbc217e2504ebf148075bc88ba7cb3 122 SUPERFAMILY SSF53098 10 122 2.02E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS06620 1d6dbe7c910dd860a0fa0a7faeba12e9 357 PANTHER PTHR30160:SF7 12 350 9.0E-75 T 22-04-2016 NHAM_RS06620 1d6dbe7c910dd860a0fa0a7faeba12e9 357 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 89 326 7.0E-39 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NHAM_RS06620 1d6dbe7c910dd860a0fa0a7faeba12e9 357 Gene3D G3DSA:3.40.50.2000 21 167 1.8E-36 T 22-04-2016 NHAM_RS06620 1d6dbe7c910dd860a0fa0a7faeba12e9 357 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 21 348 3.3E-73 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 NHAM_RS06620 1d6dbe7c910dd860a0fa0a7faeba12e9 357 SUPERFAMILY SSF53756 21 350 9.42E-83 T 22-04-2016 NHAM_RS06620 1d6dbe7c910dd860a0fa0a7faeba12e9 357 Gene3D G3DSA:3.40.50.2000 179 350 1.3E-46 T 22-04-2016 NHAM_RS06620 1d6dbe7c910dd860a0fa0a7faeba12e9 357 PANTHER PTHR30160 12 350 9.0E-75 T 22-04-2016 NHAM_RS08295 fb6d6c5f16f08e637478427b282d769f 405 PANTHER PTHR11822 1 405 0.0 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 NHAM_RS08295 fb6d6c5f16f08e637478427b282d769f 405 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 3 402 2.5E-206 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 NHAM_RS08295 fb6d6c5f16f08e637478427b282d769f 405 SMART SM01329 9 394 2.4E-125 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NHAM_RS08295 fb6d6c5f16f08e637478427b282d769f 405 SUPERFAMILY SSF53659 1 402 2.69E-149 T 22-04-2016 NHAM_RS08295 fb6d6c5f16f08e637478427b282d769f 405 Gene3D G3DSA:3.40.718.10 3 402 1.0E-171 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NHAM_RS08295 fb6d6c5f16f08e637478427b282d769f 405 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 269 288 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 NHAM_RS08295 fb6d6c5f16f08e637478427b282d769f 405 PIRSF PIRSF000108 1 405 2.8E-222 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 NHAM_RS08295 fb6d6c5f16f08e637478427b282d769f 405 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 394 5.5E-70 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NHAM_RS11195 0982aa88884f373e0be4a7f0fcc796ce 176 Pfam PF04314 Protein of unknown function (DUF461) 37 146 1.2E-40 T 22-04-2016 IPR007410 DR1885-like metal-binding protein NHAM_RS11195 0982aa88884f373e0be4a7f0fcc796ce 176 PANTHER PTHR36302:SF1 1 172 9.8E-41 T 22-04-2016 NHAM_RS11195 0982aa88884f373e0be4a7f0fcc796ce 176 PANTHER PTHR36302 1 172 9.8E-41 T 22-04-2016 NHAM_RS11195 0982aa88884f373e0be4a7f0fcc796ce 176 SUPERFAMILY SSF110087 14 154 1.07E-49 T 22-04-2016 IPR007410 DR1885-like metal-binding protein NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 Gene3D G3DSA:3.30.2090.10 711 792 1.6E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 Gene3D G3DSA:3.30.2090.10 182 265 1.2E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 SUPERFAMILY SSF82714 711 791 2.35E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 PANTHER PTHR32063 1 1022 0.0 T 22-04-2016 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 Gene3D G3DSA:3.30.70.1440 659 705 1.4E-6 T 22-04-2016 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.2E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.2E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.2E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.2E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.2E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 6.2E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 6.2E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.2E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.2E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 Gene3D G3DSA:3.30.70.1430 565 650 1.6E-9 T 22-04-2016 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 Gene3D G3DSA:3.30.70.1430 40 142 1.2E-28 T 22-04-2016 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 SUPERFAMILY SSF82866 290 490 2.22E-48 T 22-04-2016 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 SUPERFAMILY SSF82866 793 1017 6.41E-43 T 22-04-2016 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 PANTHER PTHR32063:SF21 1 1022 0.0 T 22-04-2016 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 SUPERFAMILY SSF82693 268 324 6.8E-26 T 22-04-2016 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 SUPERFAMILY SSF82714 183 266 6.8E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 Gene3D G3DSA:1.10.3850.10 275 491 1.6E-58 T 22-04-2016 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 Gene3D G3DSA:1.10.3850.10 798 1015 3.0E-53 T 22-04-2016 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 SUPERFAMILY SSF82693 136 182 6.8E-26 T 22-04-2016 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 Pfam PF00873 AcrB/AcrD/AcrF family 5 1013 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 SUPERFAMILY SSF82693 556 655 2.09E-13 T 22-04-2016 NHAM_RS10505 b4c6b0d2730929f2aac797dd2b4b6118 1042 SUPERFAMILY SSF82693 40 133 6.8E-23 T 22-04-2016 NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 PANTHER PTHR11070:SF7 32 272 2.1E-212 T 22-04-2016 NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 PANTHER PTHR11070:SF7 310 710 2.1E-212 T 22-04-2016 NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 Gene3D G3DSA:3.40.50.300 311 356 1.5E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 Gene3D G3DSA:3.40.50.300 33 139 1.5E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 Gene3D G3DSA:3.40.50.300 222 270 1.5E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 Pfam PF13361 UvrD-like helicase C-terminal domain 348 672 3.9E-61 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 Gene3D G3DSA:1.10.10.160 143 221 5.6E-20 T 22-04-2016 IPR013986 DExx box DNA helicase domain NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 Gene3D G3DSA:3.40.50.300 357 458 7.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 Gene3D G3DSA:3.40.50.300 613 706 7.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 SUPERFAMILY SSF52540 32 271 8.19E-170 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 SUPERFAMILY SSF52540 312 704 8.19E-170 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 Gene3D G3DSA:1.10.486.10 459 603 3.5E-50 T 22-04-2016 NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 PANTHER PTHR11070 32 272 2.1E-212 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 PANTHER PTHR11070 310 710 2.1E-212 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 Pfam PF00580 UvrD/REP helicase N-terminal domain 309 343 1.4E-9 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NHAM_RS14035 c55e179c983072619cad0593ceef69e5 833 Pfam PF00580 UvrD/REP helicase N-terminal domain 38 272 1.5E-55 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NHAM_RS10575 545c4d0dd40cde5429aff37d7fee0b2a 1738 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 406 506 1.5E-25 T 22-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain NHAM_RS10575 545c4d0dd40cde5429aff37d7fee0b2a 1738 SMART SM01359 871 1015 2.2E-29 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 NHAM_RS10575 545c4d0dd40cde5429aff37d7fee0b2a 1738 SMART SM01360 1076 1165 5.4E-25 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 NHAM_RS10575 545c4d0dd40cde5429aff37d7fee0b2a 1738 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 872 1015 2.0E-9 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 NHAM_RS10575 545c4d0dd40cde5429aff37d7fee0b2a 1738 PANTHER PTHR40094:SF1 333 1738 9.7E-52 T 22-04-2016 NHAM_RS10575 545c4d0dd40cde5429aff37d7fee0b2a 1738 Pfam PF01835 MG2 domain 513 608 1.4E-20 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 NHAM_RS10575 545c4d0dd40cde5429aff37d7fee0b2a 1738 Pfam PF00207 Alpha-2-macroglobulin family 1078 1162 4.3E-9 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 NHAM_RS10575 545c4d0dd40cde5429aff37d7fee0b2a 1738 SUPERFAMILY SSF48239 1280 1530 1.95E-40 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NHAM_RS10575 545c4d0dd40cde5429aff37d7fee0b2a 1738 PIRSF PIRSF038980 7 1738 0.0 T 22-04-2016 IPR026284 Alpha-2-macroglobulin domain protein, bacteria NHAM_RS10575 545c4d0dd40cde5429aff37d7fee0b2a 1738 Gene3D G3DSA:1.50.10.20 1280 1527 1.2E-29 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NHAM_RS10575 545c4d0dd40cde5429aff37d7fee0b2a 1738 PANTHER PTHR40094 333 1738 9.7E-52 T 22-04-2016 NHAM_RS07695 b95629a2fd9285143b3e19f738f2c332 157 SUPERFAMILY SSF54637 6 126 1.47E-30 T 22-04-2016 IPR029069 HotDog domain NHAM_RS07695 b95629a2fd9285143b3e19f738f2c332 157 PANTHER PTHR30272 6 132 4.8E-35 T 22-04-2016 NHAM_RS07695 b95629a2fd9285143b3e19f738f2c332 157 Pfam PF07977 FabA-like domain 5 119 1.4E-20 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NHAM_RS07695 b95629a2fd9285143b3e19f738f2c332 157 Gene3D G3DSA:3.10.129.10 6 128 8.6E-32 T 22-04-2016 IPR029069 HotDog domain NHAM_RS01070 3d1547b6ff1e4269c9f8cb79521f348e 230 Pfam PF08281 Sigma-70, region 4 141 192 8.8E-13 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS01070 3d1547b6ff1e4269c9f8cb79521f348e 230 SUPERFAMILY SSF88659 128 196 2.62E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS01070 3d1547b6ff1e4269c9f8cb79521f348e 230 Gene3D G3DSA:1.10.10.10 134 198 1.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS01070 3d1547b6ff1e4269c9f8cb79521f348e 230 PANTHER PTHR30173 15 215 5.3E-58 T 22-04-2016 NHAM_RS01070 3d1547b6ff1e4269c9f8cb79521f348e 230 Pfam PF04542 Sigma-70 region 2 36 99 9.3E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS01070 3d1547b6ff1e4269c9f8cb79521f348e 230 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 56 87 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS01070 3d1547b6ff1e4269c9f8cb79521f348e 230 SUPERFAMILY SSF88946 14 107 4.87E-27 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS01070 3d1547b6ff1e4269c9f8cb79521f348e 230 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 194 1.2E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS01070 3d1547b6ff1e4269c9f8cb79521f348e 230 Gene3D G3DSA:1.10.1740.10 14 109 9.6E-30 T 22-04-2016 NHAM_RS01070 3d1547b6ff1e4269c9f8cb79521f348e 230 PANTHER PTHR30173:SF24 15 215 5.3E-58 T 22-04-2016 NHAM_RS06800 601f8e07e67839a758861a2d00ca3a29 615 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 542 612 1.2E-16 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NHAM_RS06800 601f8e07e67839a758861a2d00ca3a29 615 Pfam PF00460 Flagella basal body rod protein 7 37 1.4E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 NHAM_RS06800 601f8e07e67839a758861a2d00ca3a29 615 Pfam PF07559 Flagellar basal body protein FlaE 383 500 1.9E-10 T 22-04-2016 IPR011491 Flagellar hook protein FlgE NHAM_RS06800 601f8e07e67839a758861a2d00ca3a29 615 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 369 596 2.5E-38 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G NHAM_RS06800 601f8e07e67839a758861a2d00ca3a29 615 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 6 370 4.6E-42 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G NHAM_RS06800 601f8e07e67839a758861a2d00ca3a29 615 PANTHER PTHR30435:SF1 2 136 2.2E-75 T 22-04-2016 NHAM_RS06800 601f8e07e67839a758861a2d00ca3a29 615 PANTHER PTHR30435:SF1 497 615 2.2E-75 T 22-04-2016 NHAM_RS06800 601f8e07e67839a758861a2d00ca3a29 615 SUPERFAMILY SSF117143 84 187 3.27E-48 T 22-04-2016 NHAM_RS06800 601f8e07e67839a758861a2d00ca3a29 615 SUPERFAMILY SSF117143 367 575 3.27E-48 T 22-04-2016 NHAM_RS06800 601f8e07e67839a758861a2d00ca3a29 615 PANTHER PTHR30435 2 136 2.2E-75 T 22-04-2016 NHAM_RS06800 601f8e07e67839a758861a2d00ca3a29 615 PANTHER PTHR30435 497 615 2.2E-75 T 22-04-2016 NHAM_RS13270 efeef151c74266fa07a15640277197a8 105 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.599 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS13270 efeef151c74266fa07a15640277197a8 105 SUPERFAMILY SSF50129 1 94 3.01E-35 T 22-04-2016 IPR011032 GroES-like NHAM_RS13270 efeef151c74266fa07a15640277197a8 105 PRINTS PR00297 10kDa chaperonin signature 25 46 4.5E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS13270 efeef151c74266fa07a15640277197a8 105 PRINTS PR00297 10kDa chaperonin signature 81 94 4.5E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS13270 efeef151c74266fa07a15640277197a8 105 PRINTS PR00297 10kDa chaperonin signature 60 72 4.5E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS13270 efeef151c74266fa07a15640277197a8 105 PRINTS PR00297 10kDa chaperonin signature 3 18 4.5E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS13270 efeef151c74266fa07a15640277197a8 105 Gene3D G3DSA:2.30.33.40 1 94 6.0E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS13270 efeef151c74266fa07a15640277197a8 105 PANTHER PTHR10772 1 104 6.1E-49 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS13270 efeef151c74266fa07a15640277197a8 105 SMART SM00883 2 94 3.0E-58 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS13270 efeef151c74266fa07a15640277197a8 105 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 NHAM_RS13270 efeef151c74266fa07a15640277197a8 105 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 1.3E-35 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS18025 cecf8c33a43e3b93d921142277384509 441 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 26 437 1.7E-142 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 NHAM_RS18025 cecf8c33a43e3b93d921142277384509 441 SUPERFAMILY SSF69304 162 438 4.58E-59 T 22-04-2016 NHAM_RS18025 cecf8c33a43e3b93d921142277384509 441 Gene3D G3DSA:2.130.10.10 160 438 1.5E-74 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NHAM_RS18025 cecf8c33a43e3b93d921142277384509 441 SUPERFAMILY SSF52964 36 169 3.01E-43 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 NHAM_RS18025 cecf8c33a43e3b93d921142277384509 441 Hamap MF_00671 Protein TolB [tolB]. 14 436 32.326 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 NHAM_RS18025 cecf8c33a43e3b93d921142277384509 441 Gene3D G3DSA:3.40.50.10070 30 159 1.5E-52 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 NHAM_RS18025 cecf8c33a43e3b93d921142277384509 441 Pfam PF07676 WD40-like Beta Propeller Repeat 249 281 1.6E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller NHAM_RS18025 cecf8c33a43e3b93d921142277384509 441 Pfam PF07676 WD40-like Beta Propeller Repeat 334 367 2.8E-5 T 22-04-2016 IPR011659 WD40-like Beta Propeller NHAM_RS18025 cecf8c33a43e3b93d921142277384509 441 Pfam PF07676 WD40-like Beta Propeller Repeat 377 413 4.7E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller NHAM_RS18025 cecf8c33a43e3b93d921142277384509 441 Pfam PF07676 WD40-like Beta Propeller Repeat 290 325 1.9E-12 T 22-04-2016 IPR011659 WD40-like Beta Propeller NHAM_RS18025 cecf8c33a43e3b93d921142277384509 441 Pfam PF04052 TolB amino-terminal domain 31 137 7.8E-34 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 NHAM_RS18025 cecf8c33a43e3b93d921142277384509 441 PANTHER PTHR36842 13 441 2.0E-78 T 22-04-2016 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 Gene3D G3DSA:1.20.990.10 293 399 2.2E-29 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 Gene3D G3DSA:2.40.30.10 241 292 2.1E-35 T 22-04-2016 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 Gene3D G3DSA:2.40.30.10 401 458 2.1E-35 T 22-04-2016 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PRINTS PR00369 Flavodoxin signature 77 90 4.2E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PRINTS PR00369 Flavodoxin signature 125 136 4.2E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PRINTS PR00369 Flavodoxin signature 157 167 4.2E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PRINTS PR00369 Flavodoxin signature 181 200 4.2E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PANTHER PTHR19384 76 613 1.1E-195 T 22-04-2016 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 Gene3D G3DSA:3.40.50.80 462 613 6.7E-54 T 22-04-2016 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 SUPERFAMILY SSF63380 241 461 4.25E-63 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PANTHER PTHR19384:SF76 76 613 1.1E-195 T 22-04-2016 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 495 504 5.7E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 282 292 5.7E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 434 443 5.7E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 508 519 5.7E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 470 489 5.7E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 562 570 5.7E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 539 555 5.7E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 401 408 5.7E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 613 3.0E-223 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 Pfam PF00258 Flavodoxin 78 206 9.9E-33 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 PIRSF PIRSF000207 2 613 3.4E-244 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 Gene3D G3DSA:3.40.50.360 68 218 6.7E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 Pfam PF00175 Oxidoreductase NAD-binding domain 471 577 4.7E-15 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 Pfam PF00667 FAD binding domain 243 439 2.9E-33 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 SUPERFAMILY SSF52218 76 217 4.5E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain NHAM_RS03540 ed9d5f4280da9c721ea50be9ca087680 613 SUPERFAMILY SSF52343 459 613 8.77E-47 T 22-04-2016 NHAM_RS09720 d556bcc50ad0a73142e1309783fe5ea9 185 Gene3D G3DSA:3.40.109.10 1 178 3.7E-39 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 NHAM_RS09720 d556bcc50ad0a73142e1309783fe5ea9 185 Pfam PF00881 Nitroreductase family 7 166 8.4E-29 T 22-04-2016 IPR029479 Nitroreductase NHAM_RS09720 d556bcc50ad0a73142e1309783fe5ea9 185 PANTHER PTHR23026 1 184 8.1E-40 T 22-04-2016 NHAM_RS09720 d556bcc50ad0a73142e1309783fe5ea9 185 PANTHER PTHR23026:SF115 1 184 8.1E-40 T 22-04-2016 NHAM_RS09720 d556bcc50ad0a73142e1309783fe5ea9 185 SUPERFAMILY SSF55469 1 178 2.09E-38 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 NHAM_RS05665 726669d08d786eb2ecdf10958686d65b 105 PANTHER PTHR33238 16 100 7.8E-19 T 22-04-2016 NHAM_RS05665 726669d08d786eb2ecdf10958686d65b 105 SMART SM00899 15 96 6.8E-15 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 NHAM_RS05665 726669d08d786eb2ecdf10958686d65b 105 Pfam PF04023 FeoA domain 16 94 4.9E-16 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 NHAM_RS05665 726669d08d786eb2ecdf10958686d65b 105 SUPERFAMILY SSF50037 44 94 8.47E-12 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal NHAM_RS05665 726669d08d786eb2ecdf10958686d65b 105 PANTHER PTHR33238:SF4 16 100 7.8E-19 T 22-04-2016 NHAM_RS11100 2f0d2bedd3157af2605febd26cdf6deb 1164 SUPERFAMILY SSF53323 721 968 4.97E-33 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 NHAM_RS11100 2f0d2bedd3157af2605febd26cdf6deb 1164 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 459 606 5.2E-8 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NHAM_RS11100 2f0d2bedd3157af2605febd26cdf6deb 1164 PANTHER PTHR18968:SF134 1 561 6.7E-236 T 22-04-2016 NHAM_RS11100 2f0d2bedd3157af2605febd26cdf6deb 1164 PANTHER PTHR18968:SF134 579 757 6.7E-236 T 22-04-2016 NHAM_RS11100 2f0d2bedd3157af2605febd26cdf6deb 1164 Gene3D G3DSA:3.40.50.970 422 659 3.4E-16 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS11100 2f0d2bedd3157af2605febd26cdf6deb 1164 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 729 915 7.1E-24 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 NHAM_RS11100 2f0d2bedd3157af2605febd26cdf6deb 1164 SUPERFAMILY SSF52518 43 224 8.24E-17 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS11100 2f0d2bedd3157af2605febd26cdf6deb 1164 PANTHER PTHR18968 1 561 6.7E-236 T 22-04-2016 NHAM_RS11100 2f0d2bedd3157af2605febd26cdf6deb 1164 PANTHER PTHR18968 579 757 6.7E-236 T 22-04-2016 NHAM_RS11100 2f0d2bedd3157af2605febd26cdf6deb 1164 Gene3D G3DSA:3.40.920.10 721 914 2.8E-14 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 NHAM_RS11100 2f0d2bedd3157af2605febd26cdf6deb 1164 SUPERFAMILY SSF52518 438 622 3.78E-19 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 Gene3D G3DSA:3.30.540.10 5 152 2.9E-49 T 22-04-2016 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 1.2E-54 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.2E-54 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 1.2E-54 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.2E-54 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 1.2E-54 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 132 155 1.2E-54 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 PANTHER PTHR20854 1 260 3.9E-90 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 Gene3D G3DSA:3.40.190.80 153 261 1.5E-33 T 22-04-2016 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 PRINTS PR01959 SuhB family inositol monophosphatase signature 158 184 3.4E-19 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 PRINTS PR01959 SuhB family inositol monophosphatase signature 200 212 3.4E-19 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 PRINTS PR01959 SuhB family inositol monophosphatase signature 19 41 3.4E-19 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 PRINTS PR01959 SuhB family inositol monophosphatase signature 106 125 3.4E-19 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 SUPERFAMILY SSF56655 5 260 9.95E-83 T 22-04-2016 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 PANTHER PTHR20854:SF4 1 260 3.9E-90 T 22-04-2016 NHAM_RS18150 50bc61292727d461504b8597a20da9f3 263 Pfam PF00459 Inositol monophosphatase family 5 257 2.3E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS07655 59e90116b31589450d9a629341ea261e 634 Pfam PF02705 K+ potassium transporter 26 556 1.6E-202 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 NHAM_RS07655 59e90116b31589450d9a629341ea261e 634 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 17 634 33.276 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup NHAM_RS07655 59e90116b31589450d9a629341ea261e 634 PANTHER PTHR30540 22 634 0.0 T 22-04-2016 NHAM_RS07655 59e90116b31589450d9a629341ea261e 634 PANTHER PTHR30540:SF36 22 634 0.0 T 22-04-2016 NHAM_RS06110 b6779b38695922036a60b0fb9ca11661 261 Gene3D G3DSA:3.90.79.10 39 221 1.5E-8 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS06110 b6779b38695922036a60b0fb9ca11661 261 SUPERFAMILY SSF55811 85 220 7.99E-10 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS06110 b6779b38695922036a60b0fb9ca11661 261 Pfam PF00293 NUDIX domain 89 215 1.5E-6 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 SMART SM00839 184 416 3.4E-87 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 215 235 2.9E-31 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 93 107 2.9E-31 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 344 355 2.9E-31 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 195 2.9E-31 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 101 114 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 182 416 3.3E-68 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 Gene3D G3DSA:3.40.50.720 182 417 3.1E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 36 164 1.4E-52 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 PIRSF PIRSF000185 6 419 2.8E-155 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 PANTHER PTHR11606 29 417 4.9E-163 T 22-04-2016 NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 Gene3D G3DSA:3.40.192.10 39 180 2.5E-55 T 22-04-2016 NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 SUPERFAMILY SSF51735 182 418 1.43E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS13845 f439c81a82a8805e68aa56a35f787455 419 SUPERFAMILY SSF53223 8 183 3.2E-64 T 22-04-2016 NHAM_RS02940 346844ed2171f00ea4541f374279628e 71 PANTHER PTHR34873 1 62 2.0E-13 T 22-04-2016 NHAM_RS02940 346844ed2171f00ea4541f374279628e 71 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 3 59 1.9E-23 T 22-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 NHAM_RS02940 346844ed2171f00ea4541f374279628e 71 SUPERFAMILY SSF54786 1 60 1.29E-17 T 22-04-2016 NHAM_RS02940 346844ed2171f00ea4541f374279628e 71 PANTHER PTHR34873:SF3 1 62 2.0E-13 T 22-04-2016 NHAM_RS02940 346844ed2171f00ea4541f374279628e 71 Gene3D G3DSA:3.30.920.30 1 60 3.9E-25 T 22-04-2016 NHAM_RS15590 bed61f71c824561b9ad5364be704532a 255 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 188 214 1.2E-5 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS15590 bed61f71c824561b9ad5364be704532a 255 Gene3D G3DSA:2.160.10.10 82 236 5.8E-35 T 22-04-2016 NHAM_RS15590 bed61f71c824561b9ad5364be704532a 255 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 188 216 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 NHAM_RS15590 bed61f71c824561b9ad5364be704532a 255 PANTHER PTHR23416 22 136 1.0E-26 T 22-04-2016 NHAM_RS15590 bed61f71c824561b9ad5364be704532a 255 PANTHER PTHR23416 159 233 1.0E-26 T 22-04-2016 NHAM_RS15590 bed61f71c824561b9ad5364be704532a 255 SUPERFAMILY SSF51161 64 236 1.89E-30 T 22-04-2016 IPR011004 Trimeric LpxA-like NHAM_RS06005 548338d552814a6aa347d2b3c8f423d1 105 SMART SM00883 2 94 1.5E-57 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS06005 548338d552814a6aa347d2b3c8f423d1 105 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 NHAM_RS06005 548338d552814a6aa347d2b3c8f423d1 105 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 1.4E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS06005 548338d552814a6aa347d2b3c8f423d1 105 Gene3D G3DSA:2.30.33.40 1 94 1.8E-38 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS06005 548338d552814a6aa347d2b3c8f423d1 105 PRINTS PR00297 10kDa chaperonin signature 25 46 4.5E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS06005 548338d552814a6aa347d2b3c8f423d1 105 PRINTS PR00297 10kDa chaperonin signature 60 72 4.5E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS06005 548338d552814a6aa347d2b3c8f423d1 105 PRINTS PR00297 10kDa chaperonin signature 81 94 4.5E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS06005 548338d552814a6aa347d2b3c8f423d1 105 PRINTS PR00297 10kDa chaperonin signature 3 18 4.5E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS06005 548338d552814a6aa347d2b3c8f423d1 105 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.356 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS06005 548338d552814a6aa347d2b3c8f423d1 105 PANTHER PTHR10772 1 104 9.1E-48 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS06005 548338d552814a6aa347d2b3c8f423d1 105 SUPERFAMILY SSF50129 1 94 1.1E-34 T 22-04-2016 IPR011032 GroES-like NHAM_RS14540 c3fb23ac7446fd0fad3a097762287a43 303 PANTHER PTHR38133 34 217 3.1E-36 T 22-04-2016 NHAM_RS14540 c3fb23ac7446fd0fad3a097762287a43 303 PANTHER PTHR38133:SF1 34 217 3.1E-36 T 22-04-2016 NHAM_RS14540 c3fb23ac7446fd0fad3a097762287a43 303 Pfam PF04434 SWIM zinc finger 157 177 1.3E-4 T 22-04-2016 IPR007527 Zinc finger, SWIM-type GO:0008270 NHAM_RS17770 55bdeaf2ee5fd6650cef64f47008c875 153 PANTHER PTHR12818 1 140 1.0E-35 T 22-04-2016 NHAM_RS17770 55bdeaf2ee5fd6650cef64f47008c875 153 SUPERFAMILY SSF118196 1 141 4.32E-42 T 22-04-2016 IPR023370 TsaA-like domain NHAM_RS17770 55bdeaf2ee5fd6650cef64f47008c875 153 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 128 5.0E-34 T 22-04-2016 IPR023370 TsaA-like domain NHAM_RS17770 55bdeaf2ee5fd6650cef64f47008c875 153 Pfam PF01980 Uncharacterised protein family UPF0066 26 126 4.9E-28 T 22-04-2016 IPR023370 TsaA-like domain NHAM_RS17770 55bdeaf2ee5fd6650cef64f47008c875 153 Gene3D G3DSA:2.40.30.70 4 141 2.7E-37 T 22-04-2016 IPR023370 TsaA-like domain NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 Gene3D G3DSA:2.40.50.100 64 95 1.8E-15 T 22-04-2016 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 Gene3D G3DSA:2.40.50.100 291 325 1.8E-15 T 22-04-2016 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 Pfam PF13437 HlyD family secretion protein 293 399 7.2E-14 T 22-04-2016 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 411 426 2.4E-45 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 73 93 2.4E-45 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 306 327 2.4E-45 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 31 54 2.4E-45 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 363 386 2.4E-45 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 426 446 2.4E-45 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 339 363 2.4E-45 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 PANTHER PTHR30386:SF3 15 114 3.9E-99 T 22-04-2016 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 PANTHER PTHR30386:SF3 153 447 3.9E-99 T 22-04-2016 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 PANTHER PTHR30386 15 114 3.9E-99 T 22-04-2016 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 PANTHER PTHR30386 153 447 3.9E-99 T 22-04-2016 NHAM_RS15120 170f529225d7925fc9fbf8882f8d49c9 447 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 23 447 1.3E-118 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 NHAM_RS10235 bb34ca74bb8007e6c08b484c300964af 230 Hamap MF_00165 Thymidylate kinase [tmk]. 14 218 28.593 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 NHAM_RS10235 bb34ca74bb8007e6c08b484c300964af 230 Pfam PF02223 Thymidylate kinase 18 206 1.1E-43 T 22-04-2016 NHAM_RS10235 bb34ca74bb8007e6c08b484c300964af 230 SUPERFAMILY SSF52540 12 212 8.57E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10235 bb34ca74bb8007e6c08b484c300964af 230 PANTHER PTHR10344 12 218 7.4E-63 T 22-04-2016 NHAM_RS10235 bb34ca74bb8007e6c08b484c300964af 230 ProSitePatterns PS01331 Thymidylate kinase signature. 103 115 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 NHAM_RS10235 bb34ca74bb8007e6c08b484c300964af 230 Gene3D G3DSA:3.40.50.300 12 218 6.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10235 bb34ca74bb8007e6c08b484c300964af 230 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 12 208 8.4E-49 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 NHAM_RS00130 3f34b7a76348ad2469f0c278ac389eea 255 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 32 249 26.207 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 NHAM_RS00130 3f34b7a76348ad2469f0c278ac389eea 255 SUPERFAMILY SSF53335 79 247 3.28E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS00130 3f34b7a76348ad2469f0c278ac389eea 255 PANTHER PTHR23417 63 251 9.8E-48 T 22-04-2016 NHAM_RS00130 3f34b7a76348ad2469f0c278ac389eea 255 PANTHER PTHR23417:SF14 63 251 9.8E-48 T 22-04-2016 NHAM_RS00130 3f34b7a76348ad2469f0c278ac389eea 255 Pfam PF02390 Putative methyltransferase 78 240 6.7E-41 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 NHAM_RS00130 3f34b7a76348ad2469f0c278ac389eea 255 Gene3D G3DSA:3.40.50.150 79 224 2.3E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS00130 3f34b7a76348ad2469f0c278ac389eea 255 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 74 240 4.9E-34 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 NHAM_RS19595 0f296c934e8cae9f7ea370aad7ced97a 149 PANTHER PTHR11465:SF7 1 128 4.5E-59 T 22-04-2016 NHAM_RS19595 0f296c934e8cae9f7ea370aad7ced97a 149 PANTHER PTHR11465 1 128 4.5E-59 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS19595 0f296c934e8cae9f7ea370aad7ced97a 149 Pfam PF00199 Catalase 2 75 1.5E-22 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS19595 0f296c934e8cae9f7ea370aad7ced97a 149 Gene3D G3DSA:2.40.180.10 2 45 4.1E-16 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS19595 0f296c934e8cae9f7ea370aad7ced97a 149 SUPERFAMILY SSF56634 4 128 1.05E-40 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS19595 0f296c934e8cae9f7ea370aad7ced97a 149 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 20 28 - T 22-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS19595 0f296c934e8cae9f7ea370aad7ced97a 149 Pfam PF06628 Catalase-related immune-responsive 103 128 6.2E-6 T 22-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS00200 a9f5bf63b6dd9bd086449854d68e66b8 407 PANTHER PTHR11712 1 404 7.2E-156 T 22-04-2016 NHAM_RS00200 a9f5bf63b6dd9bd086449854d68e66b8 407 Gene3D G3DSA:3.40.47.10 261 405 8.0E-45 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS00200 a9f5bf63b6dd9bd086449854d68e66b8 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site NHAM_RS00200 a9f5bf63b6dd9bd086449854d68e66b8 407 SMART SM00825 Beta-ketoacyl synthase 4 407 3.4E-12 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NHAM_RS00200 a9f5bf63b6dd9bd086449854d68e66b8 407 SUPERFAMILY SSF53901 1 251 1.92E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS00200 a9f5bf63b6dd9bd086449854d68e66b8 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 361 3.0E-28 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal NHAM_RS00200 a9f5bf63b6dd9bd086449854d68e66b8 407 Gene3D G3DSA:3.40.47.10 2 255 3.0E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS00200 a9f5bf63b6dd9bd086449854d68e66b8 407 SUPERFAMILY SSF53901 212 405 6.99E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS00200 a9f5bf63b6dd9bd086449854d68e66b8 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 5.7E-42 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 Pfam PF05524 PEP-utilising enzyme, N-terminal 184 303 2.6E-23 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 Pfam PF00391 PEP-utilising enzyme, mobile domain 330 403 2.6E-17 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 Gene3D G3DSA:1.10.274.10 200 310 2.5E-32 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 SMART SM00065 24 170 1.3E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 678 690 5.8E-16 T 22-04-2016 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 642 657 5.8E-16 T 22-04-2016 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 490 5.8E-16 T 22-04-2016 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 625 640 5.8E-16 T 22-04-2016 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 SUPERFAMILY SSF47831 200 320 1.16E-28 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 433 715 6.9E-86 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 Pfam PF01590 GAF domain 26 157 2.4E-10 T 22-04-2016 IPR003018 GAF domain GO:0005515 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 SUPERFAMILY SSF55781 12 160 4.8E-23 T 22-04-2016 IPR029016 GAF domain-like NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 185 733 5.2E-128 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 Gene3D G3DSA:3.50.30.10 311 434 2.1E-32 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 SUPERFAMILY SSF52009 302 421 7.98E-28 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 SUPERFAMILY SSF51621 427 725 2.62E-89 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 PANTHER PTHR22931 221 728 1.7E-240 T 22-04-2016 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 Gene3D G3DSA:3.30.450.40 11 164 4.1E-37 T 22-04-2016 IPR029016 GAF domain-like NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 PANTHER PTHR22931:SF23 221 728 1.7E-240 T 22-04-2016 NHAM_RS02440 c7d2b2561c856e7e3ea715d2e918df36 755 Gene3D G3DSA:3.20.20.60 435 730 1.6E-85 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS12090 6db32677a91f117552c249eea1ab22f7 344 PANTHER PTHR34203 79 267 1.9E-18 T 22-04-2016 NHAM_RS12090 6db32677a91f117552c249eea1ab22f7 344 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 122 267 8.4E-30 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NHAM_RS12090 6db32677a91f117552c249eea1ab22f7 344 Pfam PF05050 Methyltransferase FkbM domain 124 275 3.4E-16 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NHAM_RS12090 6db32677a91f117552c249eea1ab22f7 344 SUPERFAMILY SSF53335 90 290 3.99E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS12090 6db32677a91f117552c249eea1ab22f7 344 Gene3D G3DSA:3.40.50.150 103 299 7.5E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS03215 912a9e9ef8e5f609521369686c65f8e1 86 Pfam PF00892 EamA-like transporter family 10 70 6.6E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NHAM_RS03215 912a9e9ef8e5f609521369686c65f8e1 86 PANTHER PTHR22911 1 73 4.4E-23 T 22-04-2016 NHAM_RS03215 912a9e9ef8e5f609521369686c65f8e1 86 PANTHER PTHR22911:SF63 1 73 4.4E-23 T 22-04-2016 NHAM_RS03215 912a9e9ef8e5f609521369686c65f8e1 86 SUPERFAMILY SSF103481 8 74 3.66E-10 T 22-04-2016 NHAM_RS06175 cd628a1be3b0d14b926c17b0b55704b5 284 SUPERFAMILY SSF161098 15 284 1.03E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS06175 cd628a1be3b0d14b926c17b0b55704b5 284 PANTHER PTHR32243:SF18 4 284 2.5E-83 T 22-04-2016 NHAM_RS06175 cd628a1be3b0d14b926c17b0b55704b5 284 PANTHER PTHR32243 4 284 2.5E-83 T 22-04-2016 NHAM_RS06175 cd628a1be3b0d14b926c17b0b55704b5 284 Gene3D G3DSA:1.10.3720.10 10 270 3.9E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS06175 cd628a1be3b0d14b926c17b0b55704b5 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 275 7.7E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS17680 e7c88ad55852980f6da19aadd5675ce7 342 PANTHER PTHR30598 4 142 2.2E-17 T 22-04-2016 NHAM_RS17680 e7c88ad55852980f6da19aadd5675ce7 342 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 25 157 8.7E-18 T 22-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 NHAM_RS17680 e7c88ad55852980f6da19aadd5675ce7 342 PANTHER PTHR30598:SF1 4 142 2.2E-17 T 22-04-2016 NHAM_RS17680 e7c88ad55852980f6da19aadd5675ce7 342 SUPERFAMILY SSF89155 15 159 1.44E-15 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone NHAM_RS13975 0643060e6946959978751eb5d77e735c 299 SMART SM00244 23 185 6.5E-36 T 22-04-2016 IPR001107 Band 7 domain NHAM_RS13975 0643060e6946959978751eb5d77e735c 299 Pfam PF01145 SPFH domain / Band 7 family 27 200 8.6E-31 T 22-04-2016 IPR001107 Band 7 domain NHAM_RS13975 0643060e6946959978751eb5d77e735c 299 PANTHER PTHR10264:SF80 5 296 8.5E-97 T 22-04-2016 NHAM_RS13975 0643060e6946959978751eb5d77e735c 299 PIRSF PIRSF005651 1 292 1.3E-91 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 NHAM_RS13975 0643060e6946959978751eb5d77e735c 299 SUPERFAMILY SSF117892 56 192 1.31E-27 T 22-04-2016 IPR001107 Band 7 domain NHAM_RS13975 0643060e6946959978751eb5d77e735c 299 PANTHER PTHR10264 5 296 8.5E-97 T 22-04-2016 IPR001972 Stomatin family GO:0016020 NHAM_RS17400 642b781c19a319a210be1bd9ad29e888 489 PIRSF PIRSF019381 2 489 1.3E-171 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein NHAM_RS17400 642b781c19a319a210be1bd9ad29e888 489 PANTHER PTHR38605:SF1 2 489 1.1E-212 T 22-04-2016 NHAM_RS17400 642b781c19a319a210be1bd9ad29e888 489 Pfam PF04317 YcjX-like family, DUF463 31 488 1.1E-167 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein NHAM_RS17400 642b781c19a319a210be1bd9ad29e888 489 PANTHER PTHR38605 2 489 1.1E-212 T 22-04-2016 NHAM_RS24150 65bec616c1efc911156b1a16540aeabd 113 SUPERFAMILY SSF159941 48 91 2.35E-5 T 22-04-2016 IPR024047 Protein MM3350-like domain NHAM_RS24150 65bec616c1efc911156b1a16540aeabd 113 Gene3D G3DSA:3.10.290.30 56 91 1.3E-4 T 22-04-2016 IPR024047 Protein MM3350-like domain NHAM_RS02020 cfb2206a962651195d43ac7e2fc5422c 324 PANTHER PTHR35007 1 324 1.4E-102 T 22-04-2016 NHAM_RS02020 cfb2206a962651195d43ac7e2fc5422c 324 PANTHER PTHR35007:SF1 1 324 1.4E-102 T 22-04-2016 NHAM_RS02020 cfb2206a962651195d43ac7e2fc5422c 324 Pfam PF00482 Type II secretion system (T2SS), protein F 158 281 4.4E-19 T 22-04-2016 IPR018076 Type II secretion system F domain NHAM_RS00795 0fdce0df7c243c9b998299040f0a1e00 207 PANTHER PTHR11931 1 196 1.3E-110 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 NHAM_RS00795 0fdce0df7c243c9b998299040f0a1e00 207 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 6 124 3.4E-52 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 NHAM_RS00795 0fdce0df7c243c9b998299040f0a1e00 207 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 205 38.345 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 NHAM_RS00795 0fdce0df7c243c9b998299040f0a1e00 207 SMART SM00855 5 166 3.0E-22 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 NHAM_RS00795 0fdce0df7c243c9b998299040f0a1e00 207 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 198 1.0E-39 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 NHAM_RS00795 0fdce0df7c243c9b998299040f0a1e00 207 Gene3D G3DSA:3.40.50.1240 3 200 7.9E-75 T 22-04-2016 IPR029033 Histidine phosphatase superfamily NHAM_RS00795 0fdce0df7c243c9b998299040f0a1e00 207 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 NHAM_RS00795 0fdce0df7c243c9b998299040f0a1e00 207 SUPERFAMILY SSF53254 5 197 2.23E-64 T 22-04-2016 IPR029033 Histidine phosphatase superfamily NHAM_RS07990 98f546f9c8eaf8d53c08a576bc3652b2 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 120 29.388 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07990 98f546f9c8eaf8d53c08a576bc3652b2 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 7 120 9.7E-45 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07990 98f546f9c8eaf8d53c08a576bc3652b2 120 SUPERFAMILY SSF53137 7 118 7.2E-51 T 22-04-2016 NHAM_RS07990 98f546f9c8eaf8d53c08a576bc3652b2 120 PANTHER PTHR12899 4 120 3.4E-43 T 22-04-2016 NHAM_RS07990 98f546f9c8eaf8d53c08a576bc3652b2 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 120 1.5E-43 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07990 98f546f9c8eaf8d53c08a576bc3652b2 120 Gene3D G3DSA:3.30.420.100 25 120 9.4E-41 T 22-04-2016 NHAM_RS15870 35bb11780c565ad8172a8072e3e56e38 256 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 240 1.3E-48 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase NHAM_RS15870 35bb11780c565ad8172a8072e3e56e38 256 Gene3D G3DSA:3.60.140.10 3 254 7.3E-84 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase NHAM_RS15870 35bb11780c565ad8172a8072e3e56e38 256 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 251 7.8E-67 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase NHAM_RS15870 35bb11780c565ad8172a8072e3e56e38 256 PANTHER PTHR30616 1 255 1.4E-82 T 22-04-2016 NHAM_RS15870 35bb11780c565ad8172a8072e3e56e38 256 SUPERFAMILY SSF64438 3 253 2.2E-81 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 SUPERFAMILY SSF82693 577 682 5.23E-26 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 Pfam PF00873 AcrB/AcrD/AcrF family 5 1038 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 Gene3D G3DSA:3.30.70.1430 40 141 9.3E-30 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 Gene3D G3DSA:3.30.70.1430 578 682 4.2E-28 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 SUPERFAMILY SSF82693 819 868 4.97E-26 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 SUPERFAMILY SSF82866 299 500 3.79E-49 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 PANTHER PTHR32063:SF11 1 1056 0.0 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 SUPERFAMILY SSF82693 137 184 1.73E-25 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 SUPERFAMILY SSF82693 40 133 3.82E-24 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.8E-94 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.8E-94 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 2.8E-94 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.8E-94 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 2.8E-94 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.8E-94 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 2.8E-94 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.8E-94 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.8E-94 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 SUPERFAMILY SSF82693 683 732 4.97E-26 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 SUPERFAMILY SSF82693 277 333 1.73E-25 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 SUPERFAMILY SSF82714 733 816 3.66E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 Gene3D G3DSA:1.20.1640.10 295 508 8.3E-60 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 Gene3D G3DSA:3.30.2090.10 732 822 5.1E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 Gene3D G3DSA:3.30.2090.10 184 275 3.0E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 Gene3D G3DSA:1.10.3850.10 826 1037 3.0E-58 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 PANTHER PTHR32063 1 1056 0.0 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 SUPERFAMILY SSF82866 842 1037 2.62E-43 T 22-04-2016 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1040 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 NHAM_RS03695 a96296797c0d2359d3699d39b3636e7e 1057 SUPERFAMILY SSF82714 185 274 5.49E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 PANTHER PTHR11615:SF139 381 779 2.3E-88 T 22-04-2016 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 PANTHER PTHR11615:SF139 287 358 2.3E-88 T 22-04-2016 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 PANTHER PTHR11615:SF139 4 263 2.3E-88 T 22-04-2016 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 SUPERFAMILY SSF50692 615 777 4.14E-32 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 Gene3D G3DSA:2.20.25.90 5 60 7.8E-15 T 22-04-2016 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 PANTHER PTHR11615 381 779 2.3E-88 T 22-04-2016 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 PANTHER PTHR11615 287 358 2.3E-88 T 22-04-2016 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 PANTHER PTHR11615 4 263 2.3E-88 T 22-04-2016 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 SMART SM00926 3 56 2.2E-12 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 Gene3D G3DSA:2.40.40.20 613 777 4.4E-28 T 22-04-2016 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 Gene3D G3DSA:3.40.50.740 397 612 1.0E-53 T 22-04-2016 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 Gene3D G3DSA:3.40.50.740 61 143 1.0E-53 T 22-04-2016 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 Pfam PF01568 Molydopterin dinucleotide binding domain 654 767 9.4E-20 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 SUPERFAMILY SSF53706 3 626 6.67E-150 T 22-04-2016 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 5 56 1.1E-7 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 Pfam PF00384 Molybdopterin oxidoreductase 59 556 2.5E-42 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 Gene3D G3DSA:3.40.228.10 324 396 1.7E-57 T 22-04-2016 NHAM_RS16840 118cca99e833d974480d5bf63d62368c 781 Gene3D G3DSA:3.40.228.10 147 260 1.7E-57 T 22-04-2016 NHAM_RS10565 4e66cdbf096fb8a7f28acd9fd12838cf 580 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 121 274 1.5E-6 T 22-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 NHAM_RS10565 4e66cdbf096fb8a7f28acd9fd12838cf 580 PANTHER PTHR33908 22 466 2.2E-72 T 22-04-2016 NHAM_RS10565 4e66cdbf096fb8a7f28acd9fd12838cf 580 PANTHER PTHR33908:SF3 22 466 2.2E-72 T 22-04-2016 NHAM_RS16080 49fd9b2cfd1df073fc5f99aa82103b82 368 Gene3D G3DSA:3.40.980.10 179 293 1.4E-19 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16080 49fd9b2cfd1df073fc5f99aa82103b82 368 SUPERFAMILY SSF53218 178 294 2.22E-20 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16080 49fd9b2cfd1df073fc5f99aa82103b82 368 SUPERFAMILY SSF63867 300 367 1.83E-7 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16080 49fd9b2cfd1df073fc5f99aa82103b82 368 Gene3D G3DSA:2.40.340.10 301 367 1.3E-8 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16080 49fd9b2cfd1df073fc5f99aa82103b82 368 Pfam PF03453 MoeA N-terminal region (domain I and II) 13 156 1.9E-17 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16080 49fd9b2cfd1df073fc5f99aa82103b82 368 SMART SM00852 158 289 0.0034 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16080 49fd9b2cfd1df073fc5f99aa82103b82 368 Pfam PF00994 Probable molybdopterin binding domain 178 288 1.6E-10 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS16080 49fd9b2cfd1df073fc5f99aa82103b82 368 Gene3D G3DSA:3.90.105.10 126 164 1.4E-7 T 22-04-2016 NHAM_RS16080 49fd9b2cfd1df073fc5f99aa82103b82 368 PANTHER PTHR10192 1 368 7.3E-87 T 22-04-2016 NHAM_RS16080 49fd9b2cfd1df073fc5f99aa82103b82 368 PANTHER PTHR10192:SF17 1 368 7.3E-87 T 22-04-2016 NHAM_RS16080 49fd9b2cfd1df073fc5f99aa82103b82 368 SUPERFAMILY SSF63882 9 164 3.53E-28 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16080 49fd9b2cfd1df073fc5f99aa82103b82 368 Gene3D G3DSA:2.170.190.11 51 125 9.5E-5 T 22-04-2016 NHAM_RS19385 d4c9d7514e4f6f8accc06c78cf0e205a 275 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 65 202 1.1E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS19385 d4c9d7514e4f6f8accc06c78cf0e205a 275 PANTHER PTHR10046 128 203 9.0E-14 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 NHAM_RS19385 d4c9d7514e4f6f8accc06c78cf0e205a 275 Gene3D G3DSA:3.40.50.300 63 216 4.5E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19385 d4c9d7514e4f6f8accc06c78cf0e205a 275 PANTHER PTHR10046:SF50 128 203 9.0E-14 T 22-04-2016 NHAM_RS19385 d4c9d7514e4f6f8accc06c78cf0e205a 275 SMART SM00382 61 208 0.0011 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS19385 d4c9d7514e4f6f8accc06c78cf0e205a 275 SUPERFAMILY SSF52540 46 268 1.09E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07440 d464ba8c92d35f19704c9583a7cc603a 86 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 12 81 2.3E-28 T 22-04-2016 IPR018720 Domain of unknown function DUF2249 NHAM_RS18135 a6bd40f6916ac4a5f34ecde0e73f74a5 343 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 214 224 - T 22-04-2016 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 NHAM_RS18135 a6bd40f6916ac4a5f34ecde0e73f74a5 343 SUPERFAMILY SSF51569 5 341 1.57E-132 T 22-04-2016 NHAM_RS18135 a6bd40f6916ac4a5f34ecde0e73f74a5 343 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 342 7.0E-140 T 22-04-2016 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS18135 a6bd40f6916ac4a5f34ecde0e73f74a5 343 Gene3D G3DSA:3.20.20.70 5 335 1.1E-146 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS18135 a6bd40f6916ac4a5f34ecde0e73f74a5 343 PANTHER PTHR11627:SF20 5 343 1.8E-185 T 22-04-2016 NHAM_RS18135 a6bd40f6916ac4a5f34ecde0e73f74a5 343 PANTHER PTHR11627 5 343 1.8E-185 T 22-04-2016 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 PANTHER PTHR11252:SF0 1 716 0.0 T 22-04-2016 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 Pfam PF00013 KH domain 557 614 1.8E-10 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 SUPERFAMILY SSF50249 621 700 4.03E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 Pfam PF01138 3' exoribonuclease family, domain 1 14 144 1.1E-22 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 1.6E-22 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 Gene3D G3DSA:2.40.50.140 619 696 5.7E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 SUPERFAMILY SSF54211 295 489 5.06E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 SMART SM00322 553 618 5.0E-12 T 22-04-2016 IPR004087 K Homology domain GO:0003676 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 694 30.62 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 SUPERFAMILY SSF54211 2 144 3.19E-52 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 SUPERFAMILY SSF46915 238 321 8.63E-17 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 Pfam PF03725 3' exoribonuclease family, domain 2 147 209 3.7E-11 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 321 3.7E-19 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 SUPERFAMILY SSF55666 451 549 1.05E-25 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 Pfam PF00575 S1 RNA binding domain 620 691 3.4E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 Gene3D G3DSA:1.10.10.400 238 312 4.0E-21 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 Gene3D G3DSA:3.30.1370.10 552 618 1.6E-26 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 PIRSF PIRSF005499 1 719 3.8E-300 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 SUPERFAMILY SSF55666 145 233 2.24E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 693 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 SUPERFAMILY SSF54791 555 641 8.72E-23 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 PANTHER PTHR11252 1 716 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 SMART SM00316 621 691 1.2E-22 T 22-04-2016 IPR022967 RNA-binding domain, S1 NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 Gene3D G3DSA:3.30.230.70 313 543 2.9E-86 T 22-04-2016 IPR027408 PNPase/RNase PH domain NHAM_RS00170 2f541cf3fbeeb4b46a948a72dbdae95a 720 Gene3D G3DSA:3.30.230.70 4 225 2.3E-85 T 22-04-2016 IPR027408 PNPase/RNase PH domain NHAM_RS00900 b13b0622667aac53ff9f112f810a845e 206 PANTHER PTHR12124:SF48 9 186 1.4E-96 T 22-04-2016 NHAM_RS00900 b13b0622667aac53ff9f112f810a845e 206 SMART SM00474 1 171 1.4E-37 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 NHAM_RS00900 b13b0622667aac53ff9f112f810a845e 206 SUPERFAMILY SSF53098 22 193 4.8E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS00900 b13b0622667aac53ff9f112f810a845e 206 Pfam PF01612 3'-5' exonuclease 22 170 5.0E-38 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 NHAM_RS00900 b13b0622667aac53ff9f112f810a845e 206 PANTHER PTHR12124 9 186 1.4E-96 T 22-04-2016 NHAM_RS00900 b13b0622667aac53ff9f112f810a845e 206 Gene3D G3DSA:3.30.420.10 21 174 1.8E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS19615 3339df8857d54527772577f3fd65447a 129 Gene3D G3DSA:1.10.10.10 16 81 3.7E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS19615 3339df8857d54527772577f3fd65447a 129 PANTHER PTHR33609:SF1 24 123 3.7E-28 T 22-04-2016 NHAM_RS19615 3339df8857d54527772577f3fd65447a 129 SUPERFAMILY SSF48295 17 83 4.18E-12 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS19615 3339df8857d54527772577f3fd65447a 129 Pfam PF01527 Transposase 21 108 1.0E-8 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NHAM_RS19615 3339df8857d54527772577f3fd65447a 129 PANTHER PTHR33609 24 123 3.7E-28 T 22-04-2016 NHAM_RS16025 671d4c450424ea40e4376a7b55a4b2a7 260 SUPERFAMILY SSF47413 7 59 1.13E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS16025 671d4c450424ea40e4376a7b55a4b2a7 260 SUPERFAMILY SSF89155 72 257 1.83E-47 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone NHAM_RS16025 671d4c450424ea40e4376a7b55a4b2a7 260 PANTHER PTHR34227:SF4 55 257 2.2E-80 T 22-04-2016 NHAM_RS16025 671d4c450424ea40e4376a7b55a4b2a7 260 Pfam PF02613 Nitrate reductase delta subunit 108 226 1.0E-25 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone NHAM_RS16025 671d4c450424ea40e4376a7b55a4b2a7 260 Gene3D G3DSA:1.10.3480.10 76 258 5.1E-45 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone NHAM_RS16025 671d4c450424ea40e4376a7b55a4b2a7 260 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 6 62 2.2E-18 T 22-04-2016 IPR031856 Putative bacterial antitoxin YdaS NHAM_RS16025 671d4c450424ea40e4376a7b55a4b2a7 260 PANTHER PTHR34227 55 257 2.2E-80 T 22-04-2016 NHAM_RS16025 671d4c450424ea40e4376a7b55a4b2a7 260 Gene3D G3DSA:1.10.260.40 6 60 2.9E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS02665 eeb24fe57d955a0c609d4a35da545b57 378 Gene3D G3DSA:3.30.420.40 186 350 2.2E-17 T 22-04-2016 NHAM_RS02665 eeb24fe57d955a0c609d4a35da545b57 378 PANTHER PTHR18964 184 361 5.2E-43 T 22-04-2016 NHAM_RS02665 eeb24fe57d955a0c609d4a35da545b57 378 SUPERFAMILY SSF53067 162 328 3.58E-22 T 22-04-2016 NHAM_RS02665 eeb24fe57d955a0c609d4a35da545b57 378 PANTHER PTHR18964:SF137 184 361 5.2E-43 T 22-04-2016 NHAM_RS02665 eeb24fe57d955a0c609d4a35da545b57 378 Pfam PF00480 ROK family 187 349 1.3E-6 T 22-04-2016 IPR000600 ROK family NHAM_RS06710 6e23872285cfdcdff47fab4fce606b75 378 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 152 373 7.2E-66 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria NHAM_RS06710 6e23872285cfdcdff47fab4fce606b75 378 PANTHER PTHR30188 38 377 7.8E-167 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NHAM_RS06710 6e23872285cfdcdff47fab4fce606b75 378 Gene3D G3DSA:3.30.750.24 21 88 1.1E-4 T 22-04-2016 IPR002645 STAS domain NHAM_RS06710 6e23872285cfdcdff47fab4fce606b75 378 PANTHER PTHR30188:SF3 38 377 7.8E-167 T 22-04-2016 NHAM_RS06710 6e23872285cfdcdff47fab4fce606b75 378 Pfam PF02405 Permease MlaE 162 371 6.2E-68 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NHAM_RS06710 6e23872285cfdcdff47fab4fce606b75 378 SUPERFAMILY SSF52091 11 88 3.53E-6 T 22-04-2016 IPR002645 STAS domain NHAM_RS19200 9f8cd673541cae643514e7a65daa93f6 326 Gene3D G3DSA:3.30.200.20 1 103 2.1E-39 T 22-04-2016 NHAM_RS19200 9f8cd673541cae643514e7a65daa93f6 326 SUPERFAMILY SSF56112 5 311 2.67E-84 T 22-04-2016 IPR011009 Protein kinase-like domain NHAM_RS19200 9f8cd673541cae643514e7a65daa93f6 326 Gene3D G3DSA:3.90.1200.10 106 315 3.4E-72 T 22-04-2016 NHAM_RS19200 9f8cd673541cae643514e7a65daa93f6 326 Pfam PF01636 Phosphotransferase enzyme family 28 255 6.6E-36 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase NHAM_RS19200 9f8cd673541cae643514e7a65daa93f6 326 PANTHER PTHR21064 10 288 1.7E-49 T 22-04-2016 NHAM_RS19200 9f8cd673541cae643514e7a65daa93f6 326 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 307 1.1E-126 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 NHAM_RS19200 9f8cd673541cae643514e7a65daa93f6 326 Hamap MF_00301 Homoserine kinase [thrB]. 1 326 178.497 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 NHAM_RS16460 33be02c816430229587f6d44c286fcbb 293 SUPERFAMILY SSF52096 166 228 4.97E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS16460 33be02c816430229587f6d44c286fcbb 293 SUPERFAMILY SSF52096 20 137 4.97E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS16460 33be02c816430229587f6d44c286fcbb 293 PANTHER PTHR30341 9 293 1.9E-111 T 22-04-2016 NHAM_RS16460 33be02c816430229587f6d44c286fcbb 293 PANTHER PTHR30341:SF1 9 293 1.9E-111 T 22-04-2016 NHAM_RS16460 33be02c816430229587f6d44c286fcbb 293 Gene3D G3DSA:3.90.226.10 21 133 2.6E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS16460 33be02c816430229587f6d44c286fcbb 293 Gene3D G3DSA:3.90.226.10 202 233 2.6E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS16460 33be02c816430229587f6d44c286fcbb 293 Pfam PF01343 Peptidase family S49 90 231 4.6E-26 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 NHAM_RS10890 cbfa5ec9b7d105f4c759768a264aef8a 185 PANTHER PTHR37953 22 185 5.1E-38 T 22-04-2016 NHAM_RS10890 cbfa5ec9b7d105f4c759768a264aef8a 185 Pfam PF02643 Uncharacterized ACR, COG1430 76 178 3.5E-32 T 22-04-2016 IPR003795 Protein of unknown function DUF192 NHAM_RS10890 cbfa5ec9b7d105f4c759768a264aef8a 185 PANTHER PTHR37953:SF1 22 185 5.1E-38 T 22-04-2016 NHAM_RS10325 73d57f0ba33d268fe21645a08d5c82fa 406 Pfam PF04860 Phage portal protein 52 376 3.2E-72 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein NHAM_RS10325 73d57f0ba33d268fe21645a08d5c82fa 406 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 44 382 3.8E-50 T 22-04-2016 IPR006427 Phage portal protein, HK97 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 Pfam PF01751 Toprim domain 463 570 5.6E-18 T 22-04-2016 IPR006171 Toprim domain NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 Pfam PF00204 DNA gyrase B 265 435 2.3E-43 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 Gene3D G3DSA:3.30.565.10 40 242 7.2E-75 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 SUPERFAMILY SSF54211 265 435 7.02E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 SMART SM00387 65 211 5.2E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 SUPERFAMILY SSF55874 40 242 6.81E-57 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 39 674 3.3E-234 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR00418 DNA topoisomerase II family signature 568 580 5.8E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR00418 DNA topoisomerase II family signature 611 627 5.8E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR00418 DNA topoisomerase II family signature 104 117 5.8E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR00418 DNA topoisomerase II family signature 69 84 5.8E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR00418 DNA topoisomerase II family signature 530 546 5.8E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR00418 DNA topoisomerase II family signature 548 565 5.8E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR00418 DNA topoisomerase II family signature 314 327 5.8E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR00418 DNA topoisomerase II family signature 148 162 5.8E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR00418 DNA topoisomerase II family signature 464 478 5.8E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 Gene3D G3DSA:3.40.50.670 448 662 3.3E-79 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR01159 DNA gyrase subunit B signature 405 419 1.5E-14 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR01159 DNA gyrase subunit B signature 632 644 1.5E-14 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR01159 DNA gyrase subunit B signature 514 523 1.5E-14 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR01159 DNA gyrase subunit B signature 357 373 1.5E-14 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR01159 DNA gyrase subunit B signature 264 286 1.5E-14 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR01159 DNA gyrase subunit B signature 419 439 1.5E-14 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PRINTS PR01159 DNA gyrase subunit B signature 40 50 1.5E-14 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 SUPERFAMILY SSF56719 438 672 2.07E-75 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 Gene3D G3DSA:3.30.230.10 264 436 1.2E-44 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 PANTHER PTHR10169 16 674 4.4E-201 T 22-04-2016 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 ProSitePatterns PS00177 DNA topoisomerase II signature. 466 474 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 37 678 42.314 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 607 669 2.9E-22 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 65 210 8.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11805 6fb8685a827ba489e692c183b8771789 683 SMART SM00433 69 674 9.8E-282 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS19195 94f962551b97f1e6c78e06ffdb764283 151 PANTHER PTHR10642 7 149 1.4E-59 T 22-04-2016 NHAM_RS19195 94f962551b97f1e6c78e06ffdb764283 151 SUPERFAMILY SSF53098 7 145 4.68E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS19195 94f962551b97f1e6c78e06ffdb764283 151 Gene3D G3DSA:3.30.420.10 8 146 1.2E-60 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS19195 94f962551b97f1e6c78e06ffdb764283 151 Hamap MF_00042 Ribonuclease H [rnhA]. 6 151 35.139 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 NHAM_RS19195 94f962551b97f1e6c78e06ffdb764283 151 Pfam PF00075 RNase H 8 145 8.0E-52 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 NHAM_RS17505 f8c76529bb9b08b63d32e55169e9ea58 525 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 275 472 1.7E-44 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 NHAM_RS17505 f8c76529bb9b08b63d32e55169e9ea58 525 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 260 1.2E-30 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 NHAM_RS17505 f8c76529bb9b08b63d32e55169e9ea58 525 PANTHER PTHR10196 6 519 1.2E-192 T 22-04-2016 NHAM_RS17505 f8c76529bb9b08b63d32e55169e9ea58 525 SUPERFAMILY SSF53067 4 261 6.18E-56 T 22-04-2016 NHAM_RS17505 f8c76529bb9b08b63d32e55169e9ea58 525 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 519 1.0E-161 T 22-04-2016 IPR006003 Carbohydrate kinase, FGGY-related GO:0005975|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- NHAM_RS17505 f8c76529bb9b08b63d32e55169e9ea58 525 PIRSF PIRSF000538 2 524 6.0E-78 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NHAM_RS17505 f8c76529bb9b08b63d32e55169e9ea58 525 Gene3D G3DSA:3.30.420.40 273 519 3.5E-56 T 22-04-2016 NHAM_RS17505 f8c76529bb9b08b63d32e55169e9ea58 525 PANTHER PTHR10196:SF71 6 519 1.2E-192 T 22-04-2016 NHAM_RS17505 f8c76529bb9b08b63d32e55169e9ea58 525 Gene3D G3DSA:3.30.420.40 3 260 5.1E-64 T 22-04-2016 NHAM_RS17505 f8c76529bb9b08b63d32e55169e9ea58 525 SUPERFAMILY SSF53067 273 518 1.3E-53 T 22-04-2016 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 SUPERFAMILY SSF52540 547 853 2.41E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.4E-26 T 22-04-2016 IPR019489 Clp ATPase, C-terminal NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 PANTHER PTHR11638:SF18 1 875 0.0 T 22-04-2016 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 PANTHER PTHR11638 1 875 0.0 T 22-04-2016 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 5.2E-13 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 146 2.0E-10 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 Gene3D G3DSA:1.10.1780.10 1 149 3.0E-41 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 SMART SM00382 597 748 1.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 SMART SM00382 200 346 9.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 Gene3D G3DSA:3.40.50.300 161 344 4.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 1.9E-56 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 9.8E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 9.8E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 9.8E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 9.8E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 Gene3D G3DSA:1.10.8.60 345 430 7.1E-38 T 22-04-2016 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 Gene3D G3DSA:1.10.8.60 776 857 8.4E-32 T 22-04-2016 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 SUPERFAMILY SSF52540 161 544 3.45E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 Gene3D G3DSA:3.40.50.300 550 775 1.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 SUPERFAMILY SSF81923 4 158 2.09E-38 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 SMART SM01086 766 855 2.7E-38 T 22-04-2016 IPR019489 Clp ATPase, C-terminal NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 322 3.5E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS03535 4411cd148d16c865da5d8a114efd1c79 878 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 NHAM_RS09700 fc91fb4e4348cd00ff55dc5d92f03dbf 306 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 12 293 9.1E-53 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 NHAM_RS09700 fc91fb4e4348cd00ff55dc5d92f03dbf 306 PANTHER PTHR10210 16 278 2.5E-57 T 22-04-2016 NHAM_RS09700 fc91fb4e4348cd00ff55dc5d92f03dbf 306 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 16 113 7.9E-13 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 NHAM_RS09700 fc91fb4e4348cd00ff55dc5d92f03dbf 306 Pfam PF00156 Phosphoribosyl transferase domain 153 250 1.1E-13 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NHAM_RS09700 fc91fb4e4348cd00ff55dc5d92f03dbf 306 Gene3D G3DSA:3.40.50.2020 160 280 4.4E-22 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS09700 fc91fb4e4348cd00ff55dc5d92f03dbf 306 PANTHER PTHR10210:SF41 16 278 2.5E-57 T 22-04-2016 NHAM_RS09700 fc91fb4e4348cd00ff55dc5d92f03dbf 306 Gene3D G3DSA:3.40.50.2020 3 159 4.2E-29 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS09700 fc91fb4e4348cd00ff55dc5d92f03dbf 306 SUPERFAMILY SSF53271 85 277 8.92E-29 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS09700 fc91fb4e4348cd00ff55dc5d92f03dbf 306 SMART SM01400 4 117 8.9E-25 T 22-04-2016 NHAM_RS13480 bfc25fcf4e00ed391e84f14501731e4f 135 Gene3D G3DSA:1.10.150.20 8 53 1.4E-4 T 22-04-2016 NHAM_RS13480 bfc25fcf4e00ed391e84f14501731e4f 135 Gene3D G3DSA:1.10.150.20 61 129 2.7E-5 T 22-04-2016 NHAM_RS13480 bfc25fcf4e00ed391e84f14501731e4f 135 Pfam PF14229 Domain of unknown function (DUF4332) 10 129 4.0E-37 T 22-04-2016 IPR025567 Domain of unknown function DUF4332 KEGG: 00970+6.1.1.6 NHAM_RS06300 1386d8f6bcb84b5dc8e8b1c828b8d1bb 371 PANTHER PTHR11609:SF5 3 361 1.5E-136 T 22-04-2016 NHAM_RS06300 1386d8f6bcb84b5dc8e8b1c828b8d1bb 371 SUPERFAMILY SSF52440 10 106 6.76E-25 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS06300 1386d8f6bcb84b5dc8e8b1c828b8d1bb 371 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 14 363 4.1E-117 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 NHAM_RS06300 1386d8f6bcb84b5dc8e8b1c828b8d1bb 371 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 14 365 42.129 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 NHAM_RS06300 1386d8f6bcb84b5dc8e8b1c828b8d1bb 371 Gene3D G3DSA:3.30.470.20 189 362 6.5E-64 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS06300 1386d8f6bcb84b5dc8e8b1c828b8d1bb 371 SUPERFAMILY SSF56059 110 311 2.79E-61 T 22-04-2016 NHAM_RS06300 1386d8f6bcb84b5dc8e8b1c828b8d1bb 371 Gene3D G3DSA:3.40.50.20 10 118 4.5E-31 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS06300 1386d8f6bcb84b5dc8e8b1c828b8d1bb 371 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 101 2.1E-6 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS06300 1386d8f6bcb84b5dc8e8b1c828b8d1bb 371 Gene3D G3DSA:3.30.1490.20 125 188 1.5E-20 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS06300 1386d8f6bcb84b5dc8e8b1c828b8d1bb 371 SUPERFAMILY SSF51246 315 361 2.35E-14 T 22-04-2016 IPR011054 Rudiment single hybrid motif NHAM_RS06300 1386d8f6bcb84b5dc8e8b1c828b8d1bb 371 Pfam PF02222 ATP-grasp domain 121 291 2.9E-56 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 NHAM_RS06300 1386d8f6bcb84b5dc8e8b1c828b8d1bb 371 PANTHER PTHR11609 3 361 1.5E-136 T 22-04-2016 NHAM_RS03810 142f4a84f8258924450d26a1eed446e8 304 SUPERFAMILY SSF158544 105 201 7.85E-20 T 22-04-2016 NHAM_RS03810 142f4a84f8258924450d26a1eed446e8 304 Pfam PF03934 Type II secretion system (T2SS), protein K 91 282 2.0E-27 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 NHAM_RS03810 142f4a84f8258924450d26a1eed446e8 304 Gene3D G3DSA:1.10.40.60 110 200 6.7E-17 T 22-04-2016 NHAM_RS18955 2790cc23aafc4b3e356ace9fe69695c3 245 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 240 4.0E-55 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS18955 2790cc23aafc4b3e356ace9fe69695c3 245 Pfam PF01416 tRNA pseudouridine synthase 144 245 4.9E-28 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS18955 2790cc23aafc4b3e356ace9fe69695c3 245 Pfam PF01416 tRNA pseudouridine synthase 9 104 3.7E-9 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS18955 2790cc23aafc4b3e356ace9fe69695c3 245 Gene3D G3DSA:3.30.70.580 1 106 5.5E-34 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS18955 2790cc23aafc4b3e356ace9fe69695c3 245 SUPERFAMILY SSF55120 1 245 7.34E-82 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS18955 2790cc23aafc4b3e356ace9fe69695c3 245 Gene3D G3DSA:3.30.70.660 108 243 4.1E-46 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS18955 2790cc23aafc4b3e356ace9fe69695c3 245 PIRSF PIRSF001430 1 245 1.0E-71 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS18955 2790cc23aafc4b3e356ace9fe69695c3 245 PANTHER PTHR11142:SF0 1 245 1.7E-86 T 22-04-2016 NHAM_RS18955 2790cc23aafc4b3e356ace9fe69695c3 245 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 34.094 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS18955 2790cc23aafc4b3e356ace9fe69695c3 245 PANTHER PTHR11142 1 245 1.7E-86 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS06955 9c0284242d0a418819a7ccc31476c33b 704 SMART SM00382 302 445 6.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS06955 9c0284242d0a418819a7ccc31476c33b 704 ProSitePatterns PS00674 AAA-protein family signature. 413 431 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 NHAM_RS06955 9c0284242d0a418819a7ccc31476c33b 704 SUPERFAMILY SSF52540 304 503 1.8E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06955 9c0284242d0a418819a7ccc31476c33b 704 PANTHER PTHR23076 304 692 2.8E-15 T 22-04-2016 NHAM_RS06955 9c0284242d0a418819a7ccc31476c33b 704 Pfam PF01434 Peptidase family M41 518 690 1.2E-10 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 NHAM_RS06955 9c0284242d0a418819a7ccc31476c33b 704 PANTHER PTHR23076:SF61 304 692 2.8E-15 T 22-04-2016 NHAM_RS06955 9c0284242d0a418819a7ccc31476c33b 704 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 307 442 6.2E-21 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS06955 9c0284242d0a418819a7ccc31476c33b 704 SUPERFAMILY SSF140990 516 692 1.27E-26 T 22-04-2016 NHAM_RS06955 9c0284242d0a418819a7ccc31476c33b 704 Gene3D G3DSA:3.40.50.300 303 479 2.9E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13755 043d812d63ba2cd3d8cedd78284050a3 278 Gene3D G3DSA:1.10.600.10 14 274 1.7E-68 T 22-04-2016 IPR008949 Isoprenoid synthase domain NHAM_RS13755 043d812d63ba2cd3d8cedd78284050a3 278 SUPERFAMILY SSF48576 15 277 7.19E-68 T 22-04-2016 IPR008949 Isoprenoid synthase domain NHAM_RS13755 043d812d63ba2cd3d8cedd78284050a3 278 Pfam PF00494 Squalene/phytoene synthase 15 264 1.4E-64 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 NHAM_RS13755 043d812d63ba2cd3d8cedd78284050a3 278 PANTHER PTHR31480:SF5 15 274 6.4E-98 T 22-04-2016 NHAM_RS13755 043d812d63ba2cd3d8cedd78284050a3 278 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 154 179 - T 22-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 NHAM_RS13755 043d812d63ba2cd3d8cedd78284050a3 278 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 124 139 - T 22-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 NHAM_RS13755 043d812d63ba2cd3d8cedd78284050a3 278 PANTHER PTHR31480 15 274 6.4E-98 T 22-04-2016 NHAM_RS13755 043d812d63ba2cd3d8cedd78284050a3 278 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 13 277 5.4E-102 T 22-04-2016 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 NHAM_RS19000 8a5a206278534fb07ec20b6b651d59a3 111 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 3 106 1.9E-13 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 NHAM_RS19000 8a5a206278534fb07ec20b6b651d59a3 111 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 19 86 5.0E-13 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 NHAM_RS19000 8a5a206278534fb07ec20b6b651d59a3 111 SUPERFAMILY SSF54211 3 108 3.29E-23 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS19000 8a5a206278534fb07ec20b6b651d59a3 111 Pfam PF00825 Ribonuclease P 2 105 6.9E-20 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 NHAM_RS19000 8a5a206278534fb07ec20b6b651d59a3 111 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 47 61 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 NHAM_RS19000 8a5a206278534fb07ec20b6b651d59a3 111 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 108 11.944 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 NHAM_RS19000 8a5a206278534fb07ec20b6b651d59a3 111 PANTHER PTHR33992 2 110 4.1E-20 T 22-04-2016 NHAM_RS19000 8a5a206278534fb07ec20b6b651d59a3 111 Gene3D G3DSA:3.30.230.10 2 108 1.4E-25 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS13290 fa96b35b038ccd7fcbb09ed2b6d6d47c 498 PANTHER PTHR33908:SF1 7 483 3.0E-142 T 22-04-2016 NHAM_RS13290 fa96b35b038ccd7fcbb09ed2b6d6d47c 498 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 52 213 8.7E-38 T 22-04-2016 NHAM_RS13290 fa96b35b038ccd7fcbb09ed2b6d6d47c 498 PANTHER PTHR33908 7 483 3.0E-142 T 22-04-2016 NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 SMART SM00086 208 250 0.17 T 22-04-2016 IPR001610 PAC motif NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 SMART SM00086 331 373 8.5E-7 T 22-04-2016 IPR001610 PAC motif NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 SMART SM00086 86 128 3.8E-5 T 22-04-2016 IPR001610 PAC motif NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 SMART SM00086 453 495 1.1 T 22-04-2016 IPR001610 PAC motif NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 PANTHER PTHR24422 1 347 1.1E-125 T 22-04-2016 NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 Gene3D G3DSA:3.30.450.20 268 372 8.1E-23 T 22-04-2016 NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 Gene3D G3DSA:3.30.450.20 146 248 9.3E-24 T 22-04-2016 NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 Gene3D G3DSA:3.30.450.20 23 127 5.4E-25 T 22-04-2016 NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 Gene3D G3DSA:3.30.450.20 391 490 5.4E-21 T 22-04-2016 NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 SUPERFAMILY SSF55785 24 126 2.62E-25 T 22-04-2016 IPR000014 PAS domain NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 SUPERFAMILY SSF55785 146 251 4.19E-24 T 22-04-2016 IPR000014 PAS domain NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 Pfam PF08447 PAS fold 157 243 3.1E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 Pfam PF08447 PAS fold 36 121 2.2E-16 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 Pfam PF08447 PAS fold 280 364 1.0E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 SUPERFAMILY SSF55785 391 488 2.62E-22 T 22-04-2016 IPR000014 PAS domain NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 Pfam PF08448 PAS fold 391 492 9.4E-14 T 22-04-2016 IPR013656 PAS fold-4 NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 PANTHER PTHR24422:SF12 1 347 1.1E-125 T 22-04-2016 NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 SUPERFAMILY SSF55785 268 371 1.12E-23 T 22-04-2016 IPR000014 PAS domain NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 374 1.8E-14 T 22-04-2016 IPR000014 PAS domain NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 129 2.3E-16 T 22-04-2016 IPR000014 PAS domain NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 251 5.9E-13 T 22-04-2016 IPR000014 PAS domain NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 387 486 2.1E-11 T 22-04-2016 IPR000014 PAS domain NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 SMART SM00091 13 81 1.1 T 22-04-2016 IPR000014 PAS domain NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 SMART SM00091 380 447 0.67 T 22-04-2016 IPR000014 PAS domain NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 SMART SM00091 255 326 220.0 T 22-04-2016 IPR000014 PAS domain NHAM_RS00395 e6eaa395d7e25760d42350224ecf65df 575 SMART SM00091 135 203 4.3 T 22-04-2016 IPR000014 PAS domain NHAM_RS06055 b3eda8f45963a7bf53cb2e42a1499a35 124 PANTHER PTHR30007 1 107 4.4E-32 T 22-04-2016 NHAM_RS06055 b3eda8f45963a7bf53cb2e42a1499a35 124 PANTHER PTHR30007:SF21 1 107 4.4E-32 T 22-04-2016 NHAM_RS06055 b3eda8f45963a7bf53cb2e42a1499a35 124 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 81 1.9E-27 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS16680 b3eda8f45963a7bf53cb2e42a1499a35 124 PANTHER PTHR30007 1 107 4.4E-32 T 22-04-2016 NHAM_RS16680 b3eda8f45963a7bf53cb2e42a1499a35 124 PANTHER PTHR30007:SF21 1 107 4.4E-32 T 22-04-2016 NHAM_RS16680 b3eda8f45963a7bf53cb2e42a1499a35 124 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 81 1.9E-27 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS13105 0da259de2ed5afaf370d180d0ae11fa3 313 SUPERFAMILY SSF53335 32 78 1.25E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS13105 0da259de2ed5afaf370d180d0ae11fa3 313 SUPERFAMILY SSF53335 121 228 1.25E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS13105 0da259de2ed5afaf370d180d0ae11fa3 313 Gene3D G3DSA:3.40.50.150 58 78 5.8E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS13105 0da259de2ed5afaf370d180d0ae11fa3 313 Gene3D G3DSA:3.40.50.150 116 188 5.8E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 SMART SM00228 230 301 4.0E-4 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 PANTHER PTHR22939:SF98 1 314 1.0E-77 T 22-04-2016 NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 SUPERFAMILY SSF50494 24 224 1.08E-25 T 22-04-2016 IPR009003 Peptidase S1, PA clan NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 PRINTS PR00834 HtrA/DegQ protease family signature 179 196 2.0E-9 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 PRINTS PR00834 HtrA/DegQ protease family signature 62 74 2.0E-9 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 PRINTS PR00834 HtrA/DegQ protease family signature 83 103 2.0E-9 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 PRINTS PR00834 HtrA/DegQ protease family signature 258 270 2.0E-9 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 SUPERFAMILY SSF50156 200 309 4.34E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 PANTHER PTHR22939 1 314 1.0E-77 T 22-04-2016 NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 Pfam PF13180 PDZ domain 230 303 1.2E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 Gene3D G3DSA:2.40.10.10 125 231 7.5E-9 T 22-04-2016 NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 Gene3D G3DSA:2.40.10.10 51 124 1.4E-9 T 22-04-2016 NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 Pfam PF13365 Trypsin-like peptidase domain 54 186 5.4E-11 T 22-04-2016 NHAM_RS17910 b57a2dec1f72238e59b56891a38525e0 323 Gene3D G3DSA:2.30.42.10 232 311 2.9E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS14755 6cc7b4624db957bd9de9fe244f264729 143 SUPERFAMILY SSF103247 10 140 2.62E-30 T 22-04-2016 IPR005180 Domain of unknown function DUF302 NHAM_RS14755 6cc7b4624db957bd9de9fe244f264729 143 Pfam PF03625 Domain of unknown function DUF302 42 103 3.0E-17 T 22-04-2016 IPR005180 Domain of unknown function DUF302 NHAM_RS14755 6cc7b4624db957bd9de9fe244f264729 143 Gene3D G3DSA:3.30.310.70 10 140 8.2E-31 T 22-04-2016 IPR005180 Domain of unknown function DUF302 NHAM_RS19700 6076cfd81f12adef0f8ab121209866d9 895 Gene3D G3DSA:3.40.50.300 101 228 2.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19700 6076cfd81f12adef0f8ab121209866d9 895 Gene3D G3DSA:3.40.50.300 411 412 2.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19700 6076cfd81f12adef0f8ab121209866d9 895 Gene3D G3DSA:3.40.50.300 622 706 2.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19700 6076cfd81f12adef0f8ab121209866d9 895 Gene3D G3DSA:3.40.50.300 300 301 2.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19700 6076cfd81f12adef0f8ab121209866d9 895 Pfam PF13166 AAA domain 384 715 1.1E-16 T 22-04-2016 IPR026866 P-loop containing protein CR006/PrrC NHAM_RS19700 6076cfd81f12adef0f8ab121209866d9 895 SUPERFAMILY SSF52540 582 706 6.22E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19700 6076cfd81f12adef0f8ab121209866d9 895 SUPERFAMILY SSF52540 102 284 6.22E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13160 8fb259d8d0ee0eb473d684e365fba004 116 PANTHER PTHR10516 2 115 7.7E-58 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type NHAM_RS13160 8fb259d8d0ee0eb473d684e365fba004 116 Gene3D G3DSA:3.10.50.40 2 114 2.0E-47 T 22-04-2016 NHAM_RS13160 8fb259d8d0ee0eb473d684e365fba004 116 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 18 112 9.2E-34 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 NHAM_RS13160 8fb259d8d0ee0eb473d684e365fba004 116 SUPERFAMILY SSF54534 2 114 2.95E-43 T 22-04-2016 NHAM_RS02645 6fa6864692dfdffbf903e89c61aa6c1f 193 Gene3D G3DSA:1.10.10.690 78 190 2.2E-35 T 22-04-2016 IPR027405 YidB-like NHAM_RS02645 6fa6864692dfdffbf903e89c61aa6c1f 193 Pfam PF06078 Bacterial protein of unknown function (DUF937) 9 180 1.8E-33 T 22-04-2016 IPR009282 Protein of unknown function DUF937 NHAM_RS02645 6fa6864692dfdffbf903e89c61aa6c1f 193 SUPERFAMILY SSF140804 80 191 2.62E-32 T 22-04-2016 IPR027405 YidB-like NHAM_RS14965 c0459cb7c9051a269ea8542c2120e82a 137 Gene3D G3DSA:3.40.250.10 5 132 8.2E-31 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS14965 c0459cb7c9051a269ea8542c2120e82a 137 SMART SM00450 23 127 5.1E-14 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS14965 c0459cb7c9051a269ea8542c2120e82a 137 Pfam PF00581 Rhodanese-like domain 25 123 1.0E-13 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS14965 c0459cb7c9051a269ea8542c2120e82a 137 SUPERFAMILY SSF52821 7 131 1.83E-27 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS19815 22ccaf66b2d4543caad13718ad332faa 537 PANTHER PTHR30461:SF5 2 404 3.7E-101 T 22-04-2016 NHAM_RS19815 22ccaf66b2d4543caad13718ad332faa 537 Gene3D G3DSA:3.40.50.1390 1 109 3.6E-23 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS19815 22ccaf66b2d4543caad13718ad332faa 537 SUPERFAMILY SSF53041 1 145 1.57E-27 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS19815 22ccaf66b2d4543caad13718ad332faa 537 PANTHER PTHR30461 2 404 3.7E-101 T 22-04-2016 NHAM_RS19815 22ccaf66b2d4543caad13718ad332faa 537 Pfam PF00239 Resolvase, N terminal domain 3 144 1.0E-24 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS19815 22ccaf66b2d4543caad13718ad332faa 537 SMART SM00857 3 145 1.3E-40 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS19815 22ccaf66b2d4543caad13718ad332faa 537 Pfam PF13408 Recombinase zinc beta ribbon domain 297 352 2.1E-8 T 22-04-2016 IPR025827 Recombinase zinc beta ribbon domain NHAM_RS19815 22ccaf66b2d4543caad13718ad332faa 537 Pfam PF07508 Recombinase 168 283 3.6E-23 T 22-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 NHAM_RS12365 45773385fe2e4c6baf621d8df2454cac 258 SUPERFAMILY SSF53300 60 213 3.19E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A NHAM_RS14450 2d945b57284bec58823df6c3a3166e01 287 PANTHER PTHR32179 1 287 1.6E-121 T 22-04-2016 NHAM_RS14450 2d945b57284bec58823df6c3a3166e01 287 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 115 280 1.2E-58 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 NHAM_RS14450 2d945b57284bec58823df6c3a3166e01 287 Gene3D G3DSA:3.20.20.70 136 271 7.4E-60 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS14450 2d945b57284bec58823df6c3a3166e01 287 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 26 113 4.3E-26 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 NHAM_RS14450 2d945b57284bec58823df6c3a3166e01 287 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 15 281 1.1E-99 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 NHAM_RS14450 2d945b57284bec58823df6c3a3166e01 287 PIRSF PIRSF006250 8 284 2.8E-95 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD NHAM_RS14450 2d945b57284bec58823df6c3a3166e01 287 Gene3D G3DSA:3.90.1170.20 5 135 4.8E-48 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 NHAM_RS14450 2d945b57284bec58823df6c3a3166e01 287 SUPERFAMILY SSF54675 4 114 4.71E-34 T 22-04-2016 NHAM_RS14450 2d945b57284bec58823df6c3a3166e01 287 SUPERFAMILY SSF51690 115 281 1.02E-58 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 SUPERFAMILY SSF51971 380 480 6.0E-11 T 22-04-2016 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 483 5.6E-203 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 SUPERFAMILY SSF46548 2 163 2.2E-38 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 PANTHER PTHR11938:SF75 347 477 9.3E-135 T 22-04-2016 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 PANTHER PTHR11938:SF75 26 331 9.3E-135 T 22-04-2016 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 Gene3D G3DSA:1.10.1060.10 3 155 1.5E-41 T 22-04-2016 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 153 465 8.3E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 SUPERFAMILY SSF51971 151 409 2.94E-63 T 22-04-2016 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 140 9.3E-24 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 Gene3D G3DSA:3.50.50.60 247 409 2.3E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 PRINTS PR00419 Adrenodoxin reductase family signature 298 312 1.04E-20 T 22-04-2016 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 1.04E-20 T 22-04-2016 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 1.04E-20 T 22-04-2016 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 Gene3D G3DSA:3.40.50.720 414 482 1.2E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 Gene3D G3DSA:3.40.50.720 156 246 1.2E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 PANTHER PTHR11938 347 477 9.3E-135 T 22-04-2016 NHAM_RS05800 65b6f1cb652c930051ada281ab4aa16d 484 PANTHER PTHR11938 26 331 9.3E-135 T 22-04-2016 NHAM_RS05580 f70d7afb385dc61d742e5b8db4715952 188 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 60 147 2.5E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS05580 f70d7afb385dc61d742e5b8db4715952 188 SUPERFAMILY SSF46626 5 19 4.8E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS05580 f70d7afb385dc61d742e5b8db4715952 188 SUPERFAMILY SSF46626 53 152 4.8E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS05580 f70d7afb385dc61d742e5b8db4715952 188 Gene3D G3DSA:1.10.760.10 49 151 5.3E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS15740 f37368fc4d1b812783385c12009d6ccc 122 SMART SM00528 65 113 2.5E-13 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 NHAM_RS15740 f37368fc4d1b812783385c12009d6ccc 122 Pfam PF00816 H-NS histone family 54 107 1.7E-14 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 NHAM_RS15740 f37368fc4d1b812783385c12009d6ccc 122 Gene3D G3DSA:4.10.430.10 76 113 9.0E-16 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 NHAM_RS15740 f37368fc4d1b812783385c12009d6ccc 122 SUPERFAMILY SSF81273 72 114 1.8E-12 T 22-04-2016 NHAM_RS15940 95a51072b7c7b74c1773906426032a93 366 Gene3D G3DSA:4.10.320.10 109 150 5.5E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NHAM_RS15940 95a51072b7c7b74c1773906426032a93 366 PANTHER PTHR23151 1 364 1.9E-143 T 22-04-2016 NHAM_RS15940 95a51072b7c7b74c1773906426032a93 366 SUPERFAMILY SSF52777 160 364 6.23E-58 T 22-04-2016 NHAM_RS15940 95a51072b7c7b74c1773906426032a93 366 Gene3D G3DSA:2.40.50.100 2 77 4.9E-24 T 22-04-2016 NHAM_RS15940 95a51072b7c7b74c1773906426032a93 366 PANTHER PTHR23151:SF65 1 364 1.9E-143 T 22-04-2016 NHAM_RS15940 95a51072b7c7b74c1773906426032a93 366 Pfam PF00364 Biotin-requiring enzyme 3 74 6.3E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment NHAM_RS15940 95a51072b7c7b74c1773906426032a93 366 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 160 364 2.8E-50 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 NHAM_RS15940 95a51072b7c7b74c1773906426032a93 366 Pfam PF02817 e3 binding domain 113 146 8.0E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NHAM_RS15940 95a51072b7c7b74c1773906426032a93 366 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NHAM_RS15940 95a51072b7c7b74c1773906426032a93 366 SUPERFAMILY SSF47005 108 149 1.83E-9 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 NHAM_RS15940 95a51072b7c7b74c1773906426032a93 366 SUPERFAMILY SSF51230 2 81 1.57E-24 T 22-04-2016 IPR011053 Single hybrid motif NHAM_RS15940 95a51072b7c7b74c1773906426032a93 366 Gene3D G3DSA:3.30.559.10 160 364 2.8E-54 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain NHAM_RS04290 dbcdd15ceebf37d8e5a8591809c23b12 697 SUPERFAMILY SSF52540 430 659 1.14E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04290 dbcdd15ceebf37d8e5a8591809c23b12 697 PANTHER PTHR23073:SF24 479 618 6.4E-35 T 22-04-2016 NHAM_RS04290 dbcdd15ceebf37d8e5a8591809c23b12 697 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 479 602 1.8E-24 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS04290 dbcdd15ceebf37d8e5a8591809c23b12 697 Gene3D G3DSA:3.40.50.300 432 617 2.9E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04290 dbcdd15ceebf37d8e5a8591809c23b12 697 SMART SM00382 474 602 2.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS04290 dbcdd15ceebf37d8e5a8591809c23b12 697 PANTHER PTHR23073 479 618 6.4E-35 T 22-04-2016 NHAM_RS14200 05cdc09b70d4dbb1b99bfa0a3118bf2d 967 PANTHER PTHR12526 72 394 3.6E-37 T 22-04-2016 NHAM_RS14200 05cdc09b70d4dbb1b99bfa0a3118bf2d 967 PANTHER PTHR12526 1 44 3.6E-37 T 22-04-2016 NHAM_RS14200 05cdc09b70d4dbb1b99bfa0a3118bf2d 967 Pfam PF00534 Glycosyl transferases group 1 214 372 5.1E-27 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 NHAM_RS14200 05cdc09b70d4dbb1b99bfa0a3118bf2d 967 Pfam PF00534 Glycosyl transferases group 1 637 792 6.6E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 NHAM_RS14200 05cdc09b70d4dbb1b99bfa0a3118bf2d 967 SUPERFAMILY SSF53756 535 809 1.3E-47 T 22-04-2016 NHAM_RS14200 05cdc09b70d4dbb1b99bfa0a3118bf2d 967 Gene3D G3DSA:3.40.50.2000 217 372 5.4E-24 T 22-04-2016 NHAM_RS14200 05cdc09b70d4dbb1b99bfa0a3118bf2d 967 Gene3D G3DSA:3.40.50.2000 636 781 1.1E-16 T 22-04-2016 NHAM_RS14200 05cdc09b70d4dbb1b99bfa0a3118bf2d 967 SUPERFAMILY SSF53756 15 394 1.49E-51 T 22-04-2016 NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 196 261 1.7E-17 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 190 6.3E-18 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 Gene3D G3DSA:1.10.10.10 1 125 6.5E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 PANTHER PTHR30432 1 263 1.7E-39 T 22-04-2016 NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 Gene3D G3DSA:2.40.50.100 126 191 1.1E-20 T 22-04-2016 NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 Gene3D G3DSA:2.40.50.100 195 262 1.9E-21 T 22-04-2016 NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 PIRSF PIRSF005763 1 263 8.8E-90 T 22-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 82 1.1E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 SUPERFAMILY SSF46785 3 107 8.16E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 Pfam PF03459 TOBE domain 125 187 9.2E-9 T 22-04-2016 IPR005116 Transport-associated OB, type 1 NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 Pfam PF03459 TOBE domain 197 259 2.6E-14 T 22-04-2016 IPR005116 Transport-associated OB, type 1 NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 SUPERFAMILY SSF50331 174 260 4.37E-16 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal NHAM_RS15140 b24ea9a1c1277ef7b0a6aed0970c06a6 263 SUPERFAMILY SSF50331 123 191 1.31E-16 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal NHAM_RS12930 7af1204fab740d3ad0e36cf21142c4ee 69 Gene3D G3DSA:3.40.1620.10 8 55 1.4E-19 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM NHAM_RS12930 7af1204fab740d3ad0e36cf21142c4ee 69 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 65 1.1E-14 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM NHAM_RS12930 7af1204fab740d3ad0e36cf21142c4ee 69 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 10 55 4.0E-10 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM NHAM_RS12930 7af1204fab740d3ad0e36cf21142c4ee 69 SUPERFAMILY SSF143120 10 54 3.66E-11 T 22-04-2016 NHAM_RS05220 4ecfad731de7fa5c034cbaabb685dd86 392 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 41 5.5E-5 T 22-04-2016 NHAM_RS05220 4ecfad731de7fa5c034cbaabb685dd86 392 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 9.0E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS05220 4ecfad731de7fa5c034cbaabb685dd86 392 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 291 310 9.0E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NHAM_RS05220 4ecfad731de7fa5c034cbaabb685dd86 392 Gene3D G3DSA:3.50.50.60 1 175 2.5E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS05220 4ecfad731de7fa5c034cbaabb685dd86 392 Gene3D G3DSA:3.50.50.60 263 303 2.5E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS05220 4ecfad731de7fa5c034cbaabb685dd86 392 PANTHER PTHR10617 3 315 1.5E-25 T 22-04-2016 NHAM_RS05220 4ecfad731de7fa5c034cbaabb685dd86 392 PANTHER PTHR10617:SF111 3 315 1.5E-25 T 22-04-2016 NHAM_RS05220 4ecfad731de7fa5c034cbaabb685dd86 392 Pfam PF04820 Tryptophan halogenase 94 373 2.7E-7 T 22-04-2016 IPR006905 Tryptophan halogenase NHAM_RS05220 4ecfad731de7fa5c034cbaabb685dd86 392 SUPERFAMILY SSF51905 2 178 3.51E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS05220 4ecfad731de7fa5c034cbaabb685dd86 392 SUPERFAMILY SSF51905 260 313 3.51E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS18705 f75fe233217beb5fc7a3e29f3695ee14 406 Gene3D G3DSA:3.40.50.2300 174 318 1.7E-29 T 22-04-2016 NHAM_RS18705 f75fe233217beb5fc7a3e29f3695ee14 406 PANTHER PTHR30483:SF6 6 405 1.8E-78 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NHAM_RS18705 f75fe233217beb5fc7a3e29f3695ee14 406 SUPERFAMILY SSF53822 33 404 3.14E-77 T 22-04-2016 IPR028082 Periplasmic binding protein-like I NHAM_RS18705 f75fe233217beb5fc7a3e29f3695ee14 406 Gene3D G3DSA:3.40.50.2300 319 368 4.6E-41 T 22-04-2016 NHAM_RS18705 f75fe233217beb5fc7a3e29f3695ee14 406 Gene3D G3DSA:3.40.50.2300 30 160 4.6E-41 T 22-04-2016 NHAM_RS18705 f75fe233217beb5fc7a3e29f3695ee14 406 Pfam PF13458 Periplasmic binding protein 33 382 2.1E-63 T 22-04-2016 IPR028081 Leucine-binding protein domain NHAM_RS18705 f75fe233217beb5fc7a3e29f3695ee14 406 PANTHER PTHR30483 6 405 1.8E-78 T 22-04-2016 NHAM_RS09855 a6dff2c75f5ff2ff9c2a4851badcb834 160 SUPERFAMILY SSF56784 2 43 1.83E-12 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS09855 a6dff2c75f5ff2ff9c2a4851badcb834 160 PANTHER PTHR24093:SF349 2 120 1.6E-17 T 22-04-2016 NHAM_RS09855 a6dff2c75f5ff2ff9c2a4851badcb834 160 Gene3D G3DSA:1.20.1110.10 2 45 9.2E-17 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain NHAM_RS09855 a6dff2c75f5ff2ff9c2a4851badcb834 160 SUPERFAMILY SSF81665 73 121 4.58E-5 T 22-04-2016 NHAM_RS09855 a6dff2c75f5ff2ff9c2a4851badcb834 160 PANTHER PTHR24093 2 120 1.6E-17 T 22-04-2016 NHAM_RS09855 a6dff2c75f5ff2ff9c2a4851badcb834 160 Pfam PF00702 haloacid dehalogenase-like hydrolase 2 35 1.1E-6 T 22-04-2016 NHAM_RS19205 41b875a2239c46fc172cb904a168406b 320 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 8 290 6.7E-94 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 NHAM_RS19205 41b875a2239c46fc172cb904a168406b 320 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 7 293 35.312 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 NHAM_RS19205 41b875a2239c46fc172cb904a168406b 320 Pfam PF02401 LytB protein 9 286 1.6E-83 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 NHAM_RS19205 41b875a2239c46fc172cb904a168406b 320 PANTHER PTHR30426 7 320 7.6E-142 T 22-04-2016 NHAM_RS13780 d4ae5380e03ca959dd12564268102d67 527 Pfam PF13282 Domain of unknown function (DUF4070) 371 509 9.6E-30 T 22-04-2016 IPR025274 Domain of unknown function DUF4070 NHAM_RS13780 d4ae5380e03ca959dd12564268102d67 527 SUPERFAMILY SSF102114 176 387 1.96E-32 T 22-04-2016 NHAM_RS13780 d4ae5380e03ca959dd12564268102d67 527 Pfam PF04055 Radical SAM superfamily 185 351 8.2E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NHAM_RS13780 d4ae5380e03ca959dd12564268102d67 527 Pfam PF02310 B12 binding domain 34 137 4.3E-8 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NHAM_RS13780 d4ae5380e03ca959dd12564268102d67 527 Gene3D G3DSA:3.80.30.20 181 381 6.9E-34 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NHAM_RS13780 d4ae5380e03ca959dd12564268102d67 527 PANTHER PTHR11918:SF63 1 516 4.2E-240 T 22-04-2016 NHAM_RS13780 d4ae5380e03ca959dd12564268102d67 527 PANTHER PTHR11918 1 516 4.2E-240 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein NHAM_RS13780 d4ae5380e03ca959dd12564268102d67 527 SMART SM00729 179 394 7.7E-17 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NHAM_RS14670 c3faafc3b8c51a64b65a2b0f95a5f32d 405 SUPERFAMILY SSF55073 227 385 6.54E-45 T 22-04-2016 IPR029787 Nucleotide cyclase NHAM_RS14670 c3faafc3b8c51a64b65a2b0f95a5f32d 405 SMART SM00267 211 384 1.2E-50 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS14670 c3faafc3b8c51a64b65a2b0f95a5f32d 405 Pfam PF00990 Diguanylate cyclase, GGDEF domain 222 380 2.0E-41 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS14670 c3faafc3b8c51a64b65a2b0f95a5f32d 405 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 221 382 3.6E-43 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS14670 c3faafc3b8c51a64b65a2b0f95a5f32d 405 Gene3D G3DSA:3.30.70.270 224 386 7.4E-52 T 22-04-2016 NHAM_RS14670 c3faafc3b8c51a64b65a2b0f95a5f32d 405 PANTHER PTHR10799 71 219 1.6E-24 T 22-04-2016 NHAM_RS14670 c3faafc3b8c51a64b65a2b0f95a5f32d 405 PANTHER PTHR10799 255 380 1.6E-24 T 22-04-2016 NHAM_RS14670 c3faafc3b8c51a64b65a2b0f95a5f32d 405 PANTHER PTHR10799:SF750 71 219 1.6E-24 T 22-04-2016 NHAM_RS14670 c3faafc3b8c51a64b65a2b0f95a5f32d 405 PANTHER PTHR10799:SF750 255 380 1.6E-24 T 22-04-2016 NHAM_RS19890 4652a5f423f9c2155c65500cfbc33a50 153 SUPERFAMILY SSF140804 47 152 9.42E-32 T 22-04-2016 IPR027405 YidB-like NHAM_RS19890 4652a5f423f9c2155c65500cfbc33a50 153 Pfam PF06078 Bacterial protein of unknown function (DUF937) 10 144 1.0E-11 T 22-04-2016 IPR009282 Protein of unknown function DUF937 NHAM_RS19890 4652a5f423f9c2155c65500cfbc33a50 153 Gene3D G3DSA:1.10.10.690 47 151 3.0E-30 T 22-04-2016 IPR027405 YidB-like NHAM_RS12795 04dad54df11c70ca81b4d058e161cb11 121 Pfam PF05239 PRC-barrel domain 19 74 1.6E-11 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS12795 04dad54df11c70ca81b4d058e161cb11 121 SUPERFAMILY SSF50346 7 116 1.1E-23 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS12795 04dad54df11c70ca81b4d058e161cb11 121 PANTHER PTHR36505 1 115 5.6E-26 T 22-04-2016 NHAM_RS12795 04dad54df11c70ca81b4d058e161cb11 121 Gene3D G3DSA:2.30.30.240 18 74 6.6E-14 T 22-04-2016 NHAM_RS12795 04dad54df11c70ca81b4d058e161cb11 121 PANTHER PTHR36505:SF1 1 115 5.6E-26 T 22-04-2016 NHAM_RS16795 d0fc532c917315d78f26c01895f55554 539 PANTHER PTHR23501 18 530 2.9E-282 T 22-04-2016 NHAM_RS16795 d0fc532c917315d78f26c01895f55554 539 SUPERFAMILY SSF103473 24 232 2.09E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS16795 d0fc532c917315d78f26c01895f55554 539 SUPERFAMILY SSF103473 272 443 2.09E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS16795 d0fc532c917315d78f26c01895f55554 539 SUPERFAMILY SSF103473 504 530 2.09E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS16795 d0fc532c917315d78f26c01895f55554 539 PANTHER PTHR23501:SF51 18 530 2.9E-282 T 22-04-2016 NHAM_RS16795 d0fc532c917315d78f26c01895f55554 539 Pfam PF07690 Major Facilitator Superfamily 40 433 2.4E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS16795 d0fc532c917315d78f26c01895f55554 539 Gene3D G3DSA:1.20.1250.20 288 444 8.2E-21 T 22-04-2016 NHAM_RS16795 d0fc532c917315d78f26c01895f55554 539 Gene3D G3DSA:1.20.1250.20 505 533 8.2E-21 T 22-04-2016 NHAM_RS16795 d0fc532c917315d78f26c01895f55554 539 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 35 522 3.5E-114 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NHAM_RS16795 d0fc532c917315d78f26c01895f55554 539 Gene3D G3DSA:1.20.1250.20 31 216 8.5E-23 T 22-04-2016 NHAM_RS02965 a05cc9681b9e36f39689897d3bc630b5 228 Gene3D G3DSA:1.10.10.10 82 135 1.6E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS02965 a05cc9681b9e36f39689897d3bc630b5 228 SUPERFAMILY SSF46785 82 135 2.32E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS02965 a05cc9681b9e36f39689897d3bc630b5 228 Pfam PF08279 HTH domain 103 140 9.9E-5 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 NHAM_RS11370 c85d14c21a4da6229c346ddb17e7ce80 446 Pfam PF00394 Multicopper oxidase 195 270 2.0E-7 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 NHAM_RS11370 c85d14c21a4da6229c346ddb17e7ce80 446 Gene3D G3DSA:2.60.40.420 152 275 1.3E-14 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS11370 c85d14c21a4da6229c346ddb17e7ce80 446 PANTHER PTHR11709:SF33 72 427 4.5E-30 T 22-04-2016 NHAM_RS11370 c85d14c21a4da6229c346ddb17e7ce80 446 Pfam PF07731 Multicopper oxidase 354 427 2.1E-11 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 NHAM_RS11370 c85d14c21a4da6229c346ddb17e7ce80 446 Gene3D G3DSA:2.60.40.420 356 428 5.7E-13 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS11370 c85d14c21a4da6229c346ddb17e7ce80 446 SUPERFAMILY SSF49503 158 339 4.93E-15 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS11370 c85d14c21a4da6229c346ddb17e7ce80 446 SUPERFAMILY SSF49503 310 428 2.69E-16 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS11370 c85d14c21a4da6229c346ddb17e7ce80 446 PANTHER PTHR11709 72 427 4.5E-30 T 22-04-2016 NHAM_RS02785 a9c6e1b532f2244d6dbf0fee475f272d 738 SUPERFAMILY SSF52540 185 382 4.0E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02785 a9c6e1b532f2244d6dbf0fee475f272d 738 Pfam PF00271 Helicase conserved C-terminal domain 532 598 1.1E-4 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS02785 a9c6e1b532f2244d6dbf0fee475f272d 738 Pfam PF00270 DEAD/DEAH box helicase 227 368 3.8E-10 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NHAM_RS02785 a9c6e1b532f2244d6dbf0fee475f272d 738 TIGRFAM TIGR00595 priA: primosomal protein N' 229 734 1.9E-180 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 NHAM_RS02785 a9c6e1b532f2244d6dbf0fee475f272d 738 Gene3D G3DSA:3.40.50.300 206 389 1.4E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02785 a9c6e1b532f2244d6dbf0fee475f272d 738 SMART SM00487 201 400 7.2E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS02785 a9c6e1b532f2244d6dbf0fee475f272d 738 SUPERFAMILY SSF52540 506 645 4.23E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02785 a9c6e1b532f2244d6dbf0fee475f272d 738 Hamap MF_00983 Probable primosomal protein N' [priA]. 22 737 23.493 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 NHAM_RS02785 a9c6e1b532f2244d6dbf0fee475f272d 738 SUPERFAMILY SSF52540 229 278 4.23E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02785 a9c6e1b532f2244d6dbf0fee475f272d 738 PANTHER PTHR30580 10 738 1.4E-231 T 22-04-2016 NHAM_RS02785 a9c6e1b532f2244d6dbf0fee475f272d 738 Gene3D G3DSA:3.40.50.300 464 644 5.1E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02785 a9c6e1b532f2244d6dbf0fee475f272d 738 SMART SM00490 503 600 1.7E-4 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS03225 d8e1a8d776885f20d6973faccb354ec7 535 PANTHER PTHR10110 3 531 1.5E-93 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 NHAM_RS03225 d8e1a8d776885f20d6973faccb354ec7 535 Pfam PF00999 Sodium/hydrogen exchanger family 10 405 3.5E-55 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NHAM_RS03225 d8e1a8d776885f20d6973faccb354ec7 535 PANTHER PTHR10110:SF86 3 531 1.5E-93 T 22-04-2016 NHAM_RS03225 d8e1a8d776885f20d6973faccb354ec7 535 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 12 524 4.8E-100 T 22-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 NHAM_RS14225 2246b9c2eb1ef6ad513aa680d31ecf8e 252 Pfam PF01061 ABC-2 type transporter 11 213 1.6E-18 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 NHAM_RS14225 2246b9c2eb1ef6ad513aa680d31ecf8e 252 PANTHER PTHR30413:SF9 1 248 4.3E-46 T 22-04-2016 NHAM_RS14225 2246b9c2eb1ef6ad513aa680d31ecf8e 252 PANTHER PTHR30413 1 248 4.3E-46 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NHAM_RS06635 bb5ee70b7e3874865a7ef82cb59fcbb5 642 PANTHER PTHR10366 295 573 2.8E-106 T 22-04-2016 NHAM_RS06635 bb5ee70b7e3874865a7ef82cb59fcbb5 642 SUPERFAMILY SSF51735 293 568 1.75E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06635 bb5ee70b7e3874865a7ef82cb59fcbb5 642 Gene3D G3DSA:3.40.50.720 295 482 6.0E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06635 bb5ee70b7e3874865a7ef82cb59fcbb5 642 PANTHER PTHR10366:SF256 295 573 2.8E-106 T 22-04-2016 NHAM_RS06635 bb5ee70b7e3874865a7ef82cb59fcbb5 642 Pfam PF02719 Polysaccharide biosynthesis protein 296 591 8.9E-107 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain NHAM_RS06635 bb5ee70b7e3874865a7ef82cb59fcbb5 642 Gene3D G3DSA:3.90.25.10 483 567 2.2E-8 T 22-04-2016 NHAM_RS18825 4cdd92c940eb5b8751fdf05b5526f0e1 149 PANTHER PTHR37691:SF1 3 149 4.5E-33 T 22-04-2016 NHAM_RS18825 4cdd92c940eb5b8751fdf05b5526f0e1 149 PANTHER PTHR37691 3 149 4.5E-33 T 22-04-2016 NHAM_RS18825 4cdd92c940eb5b8751fdf05b5526f0e1 149 Gene3D G3DSA:3.40.1260.10 33 149 2.1E-29 T 22-04-2016 IPR027396 DsrEFH-like NHAM_RS18825 4cdd92c940eb5b8751fdf05b5526f0e1 149 SUPERFAMILY SSF75169 35 149 2.0E-18 T 22-04-2016 IPR027396 DsrEFH-like NHAM_RS01115 a1c1b42a70fd1a8d29b3403a6809034a 327 PANTHER PTHR30383 77 325 2.8E-50 T 22-04-2016 NHAM_RS01115 a1c1b42a70fd1a8d29b3403a6809034a 327 Gene3D G3DSA:3.40.50.1110 116 306 1.9E-35 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS01115 a1c1b42a70fd1a8d29b3403a6809034a 327 SUPERFAMILY SSF52266 117 308 2.29E-38 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS01115 a1c1b42a70fd1a8d29b3403a6809034a 327 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 121 294 3.8E-18 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS01115 a1c1b42a70fd1a8d29b3403a6809034a 327 PANTHER PTHR30383:SF5 77 325 2.8E-50 T 22-04-2016 NHAM_RS18880 ba90152f1abdf6d3bdd7899857af384f 203 SUPERFAMILY SSF88659 120 195 8.97E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS18880 ba90152f1abdf6d3bdd7899857af384f 203 Pfam PF04545 Sigma-70, region 4 142 189 2.8E-14 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS18880 ba90152f1abdf6d3bdd7899857af384f 203 Gene3D G3DSA:1.10.10.10 132 195 2.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS18880 ba90152f1abdf6d3bdd7899857af384f 203 SUPERFAMILY SSF88946 20 121 3.45E-24 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS18880 ba90152f1abdf6d3bdd7899857af384f 203 PANTHER PTHR30173 12 195 7.6E-117 T 22-04-2016 NHAM_RS18880 ba90152f1abdf6d3bdd7899857af384f 203 Pfam PF04542 Sigma-70 region 2 41 107 9.7E-14 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS18880 ba90152f1abdf6d3bdd7899857af384f 203 PANTHER PTHR30173:SF19 12 195 7.6E-117 T 22-04-2016 NHAM_RS18880 ba90152f1abdf6d3bdd7899857af384f 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 192 8.2E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS18880 ba90152f1abdf6d3bdd7899857af384f 203 Gene3D G3DSA:1.10.1740.10 20 131 2.0E-28 T 22-04-2016 NHAM_RS03530 7d3a77793b62c8eac3b8bec1622eda55 261 Pfam PF03473 MOSC domain 141 254 2.8E-18 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 NHAM_RS03530 7d3a77793b62c8eac3b8bec1622eda55 261 Pfam PF03476 MOSC N-terminal beta barrel domain 7 106 3.6E-10 T 22-04-2016 IPR005303 MOSC, N-terminal beta barrel NHAM_RS03530 7d3a77793b62c8eac3b8bec1622eda55 261 SUPERFAMILY SSF50800 144 256 2.14E-33 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain NHAM_RS03530 7d3a77793b62c8eac3b8bec1622eda55 261 SUPERFAMILY SSF50800 7 55 2.14E-33 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain NHAM_RS03530 7d3a77793b62c8eac3b8bec1622eda55 261 Gene3D G3DSA:2.40.33.20 144 256 2.6E-7 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like NHAM_RS03530 7d3a77793b62c8eac3b8bec1622eda55 261 PANTHER PTHR14237 95 259 4.5E-23 T 22-04-2016 NHAM_RS16530 158133022b0f6fc0cc30037bebf0ed6f 228 Pfam PF02798 Glutathione S-transferase, N-terminal domain 8 73 1.6E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NHAM_RS16530 158133022b0f6fc0cc30037bebf0ed6f 228 SUPERFAMILY SSF47616 71 201 2.92E-30 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS16530 158133022b0f6fc0cc30037bebf0ed6f 228 Pfam PF00043 Glutathione S-transferase, C-terminal domain 131 193 1.7E-10 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal NHAM_RS16530 158133022b0f6fc0cc30037bebf0ed6f 228 Gene3D G3DSA:3.40.30.10 2 83 4.0E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS16530 158133022b0f6fc0cc30037bebf0ed6f 228 SUPERFAMILY SSF52833 4 78 4.84E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS16530 158133022b0f6fc0cc30037bebf0ed6f 228 PANTHER PTHR11260:SF157 4 206 2.1E-72 T 22-04-2016 NHAM_RS16530 158133022b0f6fc0cc30037bebf0ed6f 228 Gene3D G3DSA:1.20.1050.10 84 195 4.0E-40 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS16530 158133022b0f6fc0cc30037bebf0ed6f 228 PANTHER PTHR11260 4 206 2.1E-72 T 22-04-2016 NHAM_RS11980 1d55cfe3ac5e5556d545f2288cfbd98b 421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 262 376 7.8E-37 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal NHAM_RS11980 1d55cfe3ac5e5556d545f2288cfbd98b 421 PANTHER PTHR11712 1 421 4.6E-218 T 22-04-2016 NHAM_RS11980 1d55cfe3ac5e5556d545f2288cfbd98b 421 SMART SM00825 Beta-ketoacyl synthase 4 421 1.5E-14 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NHAM_RS11980 1d55cfe3ac5e5556d545f2288cfbd98b 421 Gene3D G3DSA:3.40.47.10 271 419 2.3E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS11980 1d55cfe3ac5e5556d545f2288cfbd98b 421 PIRSF PIRSF000447 1 421 5.4E-191 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 NHAM_RS11980 1d55cfe3ac5e5556d545f2288cfbd98b 421 Gene3D G3DSA:3.40.47.10 1 267 1.8E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS11980 1d55cfe3ac5e5556d545f2288cfbd98b 421 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 417 4.9E-189 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 NHAM_RS11980 1d55cfe3ac5e5556d545f2288cfbd98b 421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 161 177 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site NHAM_RS11980 1d55cfe3ac5e5556d545f2288cfbd98b 421 PANTHER PTHR11712:SF273 1 421 4.6E-218 T 22-04-2016 NHAM_RS11980 1d55cfe3ac5e5556d545f2288cfbd98b 421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 254 3.5E-57 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal NHAM_RS11980 1d55cfe3ac5e5556d545f2288cfbd98b 421 SUPERFAMILY SSF53901 1 261 3.13E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS11980 1d55cfe3ac5e5556d545f2288cfbd98b 421 SUPERFAMILY SSF53901 222 419 1.01E-70 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS13125 720372ad404da7e5cffc6d71d1800583 227 Gene3D G3DSA:3.10.100.10 34 226 2.7E-38 T 22-04-2016 IPR016186 C-type lectin-like NHAM_RS13125 720372ad404da7e5cffc6d71d1800583 227 SUPERFAMILY SSF56436 33 206 2.35E-41 T 22-04-2016 IPR016187 C-type lectin fold NHAM_RS10750 b5c61111c977538270e25f4bfcd1dd4e 503 Gene3D G3DSA:3.30.420.150 137 306 3.8E-29 T 22-04-2016 NHAM_RS10750 b5c61111c977538270e25f4bfcd1dd4e 503 PANTHER PTHR30005 14 494 1.1E-128 T 22-04-2016 NHAM_RS10750 b5c61111c977538270e25f4bfcd1dd4e 503 SUPERFAMILY SSF53067 14 133 7.77E-35 T 22-04-2016 NHAM_RS10750 b5c61111c977538270e25f4bfcd1dd4e 503 SUPERFAMILY SSF109604 328 497 1.54E-16 T 22-04-2016 NHAM_RS10750 b5c61111c977538270e25f4bfcd1dd4e 503 PANTHER PTHR30005:SF4 14 494 1.1E-128 T 22-04-2016 NHAM_RS10750 b5c61111c977538270e25f4bfcd1dd4e 503 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 14 305 7.9E-98 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 NHAM_RS10750 b5c61111c977538270e25f4bfcd1dd4e 503 Pfam PF02541 Ppx/GppA phosphatase family 27 306 1.2E-47 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 NHAM_RS10750 b5c61111c977538270e25f4bfcd1dd4e 503 Gene3D G3DSA:3.30.420.40 8 133 3.5E-38 T 22-04-2016 NHAM_RS10750 b5c61111c977538270e25f4bfcd1dd4e 503 SUPERFAMILY SSF53067 137 307 3.56E-37 T 22-04-2016 NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 Gene3D G3DSA:1.10.287.130 185 245 1.9E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 419 3.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 375 3.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 3.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 3.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 SMART SM00388 192 259 1.5E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 PANTHER PTHR24423 81 422 6.7E-103 T 22-04-2016 NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 305 420 1.3E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 Gene3D G3DSA:3.30.565.10 246 419 5.9E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 SUPERFAMILY SSF47384 180 257 2.55E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 PANTHER PTHR24423:SF554 81 422 6.7E-103 T 22-04-2016 NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 SUPERFAMILY SSF55874 248 420 3.41E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 SUPERFAMILY SSF55785 80 164 8.37E-6 T 22-04-2016 IPR000014 PAS domain NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 SMART SM00387 305 422 3.8E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 193 257 8.0E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS03290 b375f9e57b135237bef222fc0061769c 429 Gene3D G3DSA:3.30.450.20 79 167 1.3E-6 T 22-04-2016 NHAM_RS13360 acb9c5de95fac1e176cc63944452e0ba 304 PANTHER PTHR11795 1 304 4.0E-131 T 22-04-2016 NHAM_RS13360 acb9c5de95fac1e176cc63944452e0ba 304 PANTHER PTHR11795:SF371 1 304 4.0E-131 T 22-04-2016 NHAM_RS13360 acb9c5de95fac1e176cc63944452e0ba 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 288 1.3E-52 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NHAM_RS03185 dfc0260245282d76d0b34a55f78f7a7a 419 SUPERFAMILY SSF54373 256 361 1.35E-15 T 22-04-2016 NHAM_RS03185 dfc0260245282d76d0b34a55f78f7a7a 419 Pfam PF01593 Flavin containing amine oxidoreductase 141 411 2.3E-32 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 NHAM_RS03185 dfc0260245282d76d0b34a55f78f7a7a 419 Pfam PF01593 Flavin containing amine oxidoreductase 19 87 8.2E-13 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 NHAM_RS03185 dfc0260245282d76d0b34a55f78f7a7a 419 SUPERFAMILY SSF51905 349 412 2.59E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS03185 dfc0260245282d76d0b34a55f78f7a7a 419 SUPERFAMILY SSF51905 6 270 2.59E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS03185 dfc0260245282d76d0b34a55f78f7a7a 419 PANTHER PTHR10742:SF277 9 415 4.5E-73 T 22-04-2016 NHAM_RS03185 dfc0260245282d76d0b34a55f78f7a7a 419 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 378 393 4.7E-5 T 22-04-2016 NHAM_RS03185 dfc0260245282d76d0b34a55f78f7a7a 419 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 4.7E-5 T 22-04-2016 NHAM_RS03185 dfc0260245282d76d0b34a55f78f7a7a 419 PANTHER PTHR10742 9 415 4.5E-73 T 22-04-2016 NHAM_RS03185 dfc0260245282d76d0b34a55f78f7a7a 419 Gene3D G3DSA:3.50.50.60 176 272 3.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS03185 dfc0260245282d76d0b34a55f78f7a7a 419 Gene3D G3DSA:3.50.50.60 6 90 3.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS03185 dfc0260245282d76d0b34a55f78f7a7a 419 Gene3D G3DSA:3.50.50.60 369 414 3.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS03370 0a50a05ef9c1d81e2af05140f9b486cb 222 Gene3D G3DSA:2.60.120.10 88 210 2.4E-17 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS03370 0a50a05ef9c1d81e2af05140f9b486cb 222 SMART SM00100 82 194 1.7E-5 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS03370 0a50a05ef9c1d81e2af05140f9b486cb 222 Pfam PF00027 Cyclic nucleotide-binding domain 102 182 6.5E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS03370 0a50a05ef9c1d81e2af05140f9b486cb 222 SUPERFAMILY SSF51206 92 205 1.96E-17 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like NHAM_RS06975 24aa6c65c8b9a45d65a3f53bb56a15f1 355 Gene3D G3DSA:3.40.50.300 75 229 3.6E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06975 24aa6c65c8b9a45d65a3f53bb56a15f1 355 SMART SM00382 69 223 0.0073 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS06975 24aa6c65c8b9a45d65a3f53bb56a15f1 355 Pfam PF05621 Bacterial TniB protein 73 291 1.2E-11 T 22-04-2016 IPR008868 Bacterial TniB NHAM_RS06975 24aa6c65c8b9a45d65a3f53bb56a15f1 355 SUPERFAMILY SSF52540 62 312 3.22E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 SUPERFAMILY SSF52540 302 524 4.28E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 Pfam PF12848 ABC transporter 229 310 4.3E-26 T 22-04-2016 IPR032781 ABC-transporter extension domain NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 Gene3D G3DSA:3.40.50.300 123 277 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 Gene3D G3DSA:3.40.50.300 1 88 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 Gene3D G3DSA:3.40.50.300 323 531 1.5E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 PANTHER PTHR19211:SF51 1 530 0.0 T 22-04-2016 NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 Pfam PF00005 ABC transporter 21 190 2.5E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 Pfam PF00005 ABC transporter 343 471 9.3E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 SMART SM00382 349 516 8.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 SMART SM00382 26 235 3.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 PANTHER PTHR19211 1 530 0.0 T 22-04-2016 NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 SUPERFAMILY SSF52540 131 257 6.21E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15225 5e7886a0c35141dfde170a5661992f60 540 SUPERFAMILY SSF52540 2 92 6.21E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18130 d16711587152f2b0a981490250c27123 398 Gene3D G3DSA:3.40.50.1260 6 179 8.0E-71 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 SUPERFAMILY SSF53748 5 396 6.01E-148 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 Pfam PF00162 Phosphoglycerate kinase 8 387 2.1E-144 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 Gene3D G3DSA:3.40.50.1270 180 385 1.9E-75 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 17 27 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 2.2E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 PRINTS PR00477 Phosphoglycerate kinase family signature 313 338 2.2E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 PRINTS PR00477 Phosphoglycerate kinase family signature 373 390 2.2E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 PRINTS PR00477 Phosphoglycerate kinase family signature 12 28 2.2E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 2.2E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 PRINTS PR00477 Phosphoglycerate kinase family signature 168 190 2.2E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 2.2E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 2.2E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 PRINTS PR00477 Phosphoglycerate kinase family signature 33 55 2.2E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 PIRSF PIRSF000724 1 398 7.8E-144 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 PANTHER PTHR11406 4 398 1.3E-193 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS18130 d16711587152f2b0a981490250c27123 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 7 397 39.06 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 NHAM_RS08560 304787dde1c971e6ab68b7d7fa7eea93 323 PANTHER PTHR30482:SF8 2 321 2.7E-155 T 22-04-2016 NHAM_RS08560 304787dde1c971e6ab68b7d7fa7eea93 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 303 2.1E-34 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NHAM_RS08560 304787dde1c971e6ab68b7d7fa7eea93 323 PANTHER PTHR30482 2 321 2.7E-155 T 22-04-2016 NHAM_RS20520 9a4d4f06970686b5dfbdb1c28a6ce9a0 64 Pfam PF12728 Helix-turn-helix domain 8 53 2.6E-13 T 22-04-2016 NHAM_RS20520 9a4d4f06970686b5dfbdb1c28a6ce9a0 64 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 8 51 5.1E-13 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 NHAM_RS20520 9a4d4f06970686b5dfbdb1c28a6ce9a0 64 SUPERFAMILY SSF46955 8 56 1.65E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain NHAM_RS07960 d9e0ea9cfc6ef47f1581058b3cca514e 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.633 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NHAM_RS07960 d9e0ea9cfc6ef47f1581058b3cca514e 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.0E-56 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NHAM_RS07960 d9e0ea9cfc6ef47f1581058b3cca514e 122 PANTHER PTHR11761 1 122 3.9E-77 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NHAM_RS07960 d9e0ea9cfc6ef47f1581058b3cca514e 122 SMART SM01374 1 122 2.8E-86 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NHAM_RS07960 d9e0ea9cfc6ef47f1581058b3cca514e 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site NHAM_RS07960 d9e0ea9cfc6ef47f1581058b3cca514e 122 Gene3D G3DSA:2.40.150.20 1 122 1.5E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NHAM_RS07960 d9e0ea9cfc6ef47f1581058b3cca514e 122 SUPERFAMILY SSF50193 1 122 2.09E-52 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NHAM_RS07960 d9e0ea9cfc6ef47f1581058b3cca514e 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.7E-57 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 NHAM_RS13260 aaf457f37140cc88d740d089a9b2598e 246 SUPERFAMILY SSF53218 4 176 9.55E-39 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS13260 aaf457f37140cc88d740d089a9b2598e 246 Gene3D G3DSA:3.40.980.10 4 204 3.7E-38 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS13260 aaf457f37140cc88d740d089a9b2598e 246 PANTHER PTHR23293 1 167 2.7E-55 T 22-04-2016 NHAM_RS13260 aaf457f37140cc88d740d089a9b2598e 246 PANTHER PTHR23293:SF5 1 167 2.7E-55 T 22-04-2016 NHAM_RS13260 aaf457f37140cc88d740d089a9b2598e 246 Pfam PF00994 Probable molybdopterin binding domain 8 167 1.3E-34 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS13260 aaf457f37140cc88d740d089a9b2598e 246 SMART SM00852 8 169 2.2E-30 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00691 Adhesin B signature 80 99 6.2E-26 T 22-04-2016 IPR006129 Adhesin B GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00691 Adhesin B signature 290 308 6.2E-26 T 22-04-2016 IPR006129 Adhesin B GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00691 Adhesin B signature 36 57 6.2E-26 T 22-04-2016 IPR006129 Adhesin B GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00691 Adhesin B signature 61 79 6.2E-26 T 22-04-2016 IPR006129 Adhesin B GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00691 Adhesin B signature 269 287 6.2E-26 T 22-04-2016 IPR006129 Adhesin B GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00691 Adhesin B signature 247 264 6.2E-26 T 22-04-2016 IPR006129 Adhesin B GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00691 Adhesin B signature 140 159 6.2E-26 T 22-04-2016 IPR006129 Adhesin B GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00691 Adhesin B signature 198 215 6.2E-26 T 22-04-2016 IPR006129 Adhesin B GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 SUPERFAMILY SSF53807 35 311 5.89E-87 T 22-04-2016 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00690 Adhesin family signature 36 54 1.7E-27 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00690 Adhesin family signature 80 97 1.7E-27 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00690 Adhesin family signature 277 296 1.7E-27 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00690 Adhesin family signature 198 219 1.7E-27 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00690 Adhesin family signature 67 80 1.7E-27 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PRINTS PR00690 Adhesin family signature 251 269 1.7E-27 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PANTHER PTHR30477:SF16 1 311 3.8E-93 T 22-04-2016 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 PANTHER PTHR30477 1 311 3.8E-93 T 22-04-2016 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 Gene3D G3DSA:3.40.50.1980 30 190 1.8E-51 T 22-04-2016 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 Gene3D G3DSA:3.40.50.1980 191 312 2.7E-45 T 22-04-2016 NHAM_RS17580 c66f4c60f3888fb991a8d47279aa9ecf 313 Pfam PF01297 Zinc-uptake complex component A periplasmic 39 309 4.8E-83 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 NHAM_RS14545 bcaa52912e07b99b48838a19d4562a24 902 Pfam PF00176 SNF2 family N-terminal domain 438 706 1.1E-54 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 NHAM_RS14545 bcaa52912e07b99b48838a19d4562a24 902 Pfam PF00271 Helicase conserved C-terminal domain 733 834 3.6E-15 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS14545 bcaa52912e07b99b48838a19d4562a24 902 Pfam PF12419 SNF2 Helicase protein 237 368 2.1E-31 T 22-04-2016 IPR022138 Helicase SWF/SNF-related NHAM_RS14545 bcaa52912e07b99b48838a19d4562a24 902 SUPERFAMILY SSF52540 399 637 5.16E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14545 bcaa52912e07b99b48838a19d4562a24 902 Gene3D G3DSA:3.40.50.300 717 869 4.4E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14545 bcaa52912e07b99b48838a19d4562a24 902 SUPERFAMILY SSF52540 640 893 2.66E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14545 bcaa52912e07b99b48838a19d4562a24 902 PANTHER PTHR10799 420 889 2.8E-139 T 22-04-2016 NHAM_RS14545 bcaa52912e07b99b48838a19d4562a24 902 SMART SM00490 751 834 3.8E-16 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS14545 bcaa52912e07b99b48838a19d4562a24 902 SMART SM00487 418 611 7.8E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS14545 bcaa52912e07b99b48838a19d4562a24 902 Gene3D G3DSA:3.40.50.300 418 597 1.8E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13740 ce53112c317facd342079562e06d00f1 244 TIGRFAM TIGR03468 HpnG: hopanoid-associated phosphorylase 18 229 9.8E-69 T 22-04-2016 IPR017831 Hopanoid-associated phosphorylase HpnG NHAM_RS13740 ce53112c317facd342079562e06d00f1 244 SUPERFAMILY SSF53167 21 176 3.67E-24 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NHAM_RS13740 ce53112c317facd342079562e06d00f1 244 Gene3D G3DSA:3.40.50.1580 52 176 4.0E-18 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NHAM_RS13740 ce53112c317facd342079562e06d00f1 244 Pfam PF01048 Phosphorylase superfamily 22 177 7.9E-15 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NHAM_RS00605 c5a40781c88f8f36247e67053e75a1bd 184 PANTHER PTHR32194 9 184 1.6E-122 T 22-04-2016 NHAM_RS00605 c5a40781c88f8f36247e67053e75a1bd 184 Pfam PF00227 Proteasome subunit 10 180 7.8E-22 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 NHAM_RS00605 c5a40781c88f8f36247e67053e75a1bd 184 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 11 181 40.599 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 NHAM_RS00605 c5a40781c88f8f36247e67053e75a1bd 184 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 12 181 2.2E-83 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 NHAM_RS00605 c5a40781c88f8f36247e67053e75a1bd 184 SUPERFAMILY SSF56235 8 181 2.24E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NHAM_RS00605 c5a40781c88f8f36247e67053e75a1bd 184 Gene3D G3DSA:3.60.20.10 12 182 1.6E-84 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NHAM_RS00605 c5a40781c88f8f36247e67053e75a1bd 184 PIRSF PIRSF039093 5 184 5.5E-85 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 NHAM_RS04185 30ee3b3f36f09561e20f3bfd29ee4f78 342 PANTHER PTHR33055:SF2 3 340 4.9E-127 T 22-04-2016 NHAM_RS04185 30ee3b3f36f09561e20f3bfd29ee4f78 342 PANTHER PTHR33055 3 340 4.9E-127 T 22-04-2016 NHAM_RS04185 30ee3b3f36f09561e20f3bfd29ee4f78 342 Pfam PF01548 Transposase 7 147 1.3E-13 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS04185 30ee3b3f36f09561e20f3bfd29ee4f78 342 Pfam PF02371 Transposase IS116/IS110/IS902 family 213 289 9.4E-22 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS11605 853f77a8e4fbedbae62ccdad9f1f9a56 356 Pfam PF03060 Nitronate monooxygenase 6 345 1.8E-75 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 NHAM_RS11605 853f77a8e4fbedbae62ccdad9f1f9a56 356 PANTHER PTHR32332 111 356 2.5E-129 T 22-04-2016 NHAM_RS11605 853f77a8e4fbedbae62ccdad9f1f9a56 356 PANTHER PTHR32332 2 82 2.5E-129 T 22-04-2016 NHAM_RS11605 853f77a8e4fbedbae62ccdad9f1f9a56 356 PANTHER PTHR32332:SF12 111 356 2.5E-129 T 22-04-2016 NHAM_RS11605 853f77a8e4fbedbae62ccdad9f1f9a56 356 PANTHER PTHR32332:SF12 2 82 2.5E-129 T 22-04-2016 NHAM_RS11605 853f77a8e4fbedbae62ccdad9f1f9a56 356 SUPERFAMILY SSF51412 6 332 1.1E-61 T 22-04-2016 NHAM_RS11605 853f77a8e4fbedbae62ccdad9f1f9a56 356 Gene3D G3DSA:3.20.20.70 5 338 7.4E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS04855 672255c4fe6eb992ea43a8a9e8b6d27a 210 SUPERFAMILY SSF52833 16 193 2.14E-58 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS04855 672255c4fe6eb992ea43a8a9e8b6d27a 210 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 169 199 2.6E-5 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NHAM_RS04855 672255c4fe6eb992ea43a8a9e8b6d27a 210 PIRSF PIRSF000239 13 207 1.2E-69 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 NHAM_RS04855 672255c4fe6eb992ea43a8a9e8b6d27a 210 Gene3D G3DSA:3.40.30.10 17 166 6.2E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS04855 672255c4fe6eb992ea43a8a9e8b6d27a 210 Pfam PF00578 AhpC/TSA family 19 148 1.4E-34 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NHAM_RS04855 672255c4fe6eb992ea43a8a9e8b6d27a 210 Gene3D G3DSA:3.30.1020.10 167 200 6.8E-9 T 22-04-2016 NHAM_RS04855 672255c4fe6eb992ea43a8a9e8b6d27a 210 PANTHER PTHR10681 15 188 1.1E-58 T 22-04-2016 NHAM_RS15055 cdfd7c544a0fdde4869881ccbe17eeb2 350 Gene3D G3DSA:3.20.20.210 8 344 2.3E-125 T 22-04-2016 NHAM_RS15055 cdfd7c544a0fdde4869881ccbe17eeb2 350 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 8 344 6.0E-110 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS15055 cdfd7c544a0fdde4869881ccbe17eeb2 350 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS15055 cdfd7c544a0fdde4869881ccbe17eeb2 350 PANTHER PTHR21091:SF2 22 344 1.2E-113 T 22-04-2016 NHAM_RS15055 cdfd7c544a0fdde4869881ccbe17eeb2 350 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 347 46.903 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS15055 cdfd7c544a0fdde4869881ccbe17eeb2 350 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 344 1.0E-118 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS15055 cdfd7c544a0fdde4869881ccbe17eeb2 350 PANTHER PTHR21091 22 344 1.2E-113 T 22-04-2016 NHAM_RS15055 cdfd7c544a0fdde4869881ccbe17eeb2 350 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS15055 cdfd7c544a0fdde4869881ccbe17eeb2 350 SUPERFAMILY SSF51726 7 345 4.32E-100 T 22-04-2016 NHAM_RS06260 ab3d01e3eca6aa029503f8a4fe94eaea 626 Pfam PF08439 Oligopeptidase F 149 217 1.3E-20 T 22-04-2016 IPR013647 Oligopeptidase F, N-terminal domain NHAM_RS06260 ab3d01e3eca6aa029503f8a4fe94eaea 626 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 41 625 7.4E-202 T 22-04-2016 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 NHAM_RS06260 ab3d01e3eca6aa029503f8a4fe94eaea 626 Pfam PF01432 Peptidase family M3 370 608 2.2E-34 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 NHAM_RS06260 ab3d01e3eca6aa029503f8a4fe94eaea 626 SUPERFAMILY SSF55486 39 609 3.42E-112 T 22-04-2016 NHAM_RS06260 ab3d01e3eca6aa029503f8a4fe94eaea 626 Gene3D G3DSA:3.40.390.10 377 454 3.5E-5 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NHAM_RS06260 ab3d01e3eca6aa029503f8a4fe94eaea 626 PANTHER PTHR11804 223 625 3.2E-78 T 22-04-2016 NHAM_RS06260 ab3d01e3eca6aa029503f8a4fe94eaea 626 PANTHER PTHR11804:SF8 223 625 3.2E-78 T 22-04-2016 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 SUPERFAMILY SSF46626 441 652 8.91E-67 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 SUPERFAMILY SSF81342 15 277 6.28E-107 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 Pfam PF00033 Cytochrome b/b6/petB 32 218 4.8E-76 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 Gene3D G3DSA:1.10.760.10 441 653 3.7E-82 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 Gene3D G3DSA:1.20.810.10 15 396 7.2E-173 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 Gene3D G3DSA:1.20.5.100 654 686 1.0E-16 T 22-04-2016 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 PANTHER PTHR19271 11 420 1.1E-251 T 22-04-2016 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 Pfam PF02167 Cytochrome C1 family 447 686 1.1E-98 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 PRINTS PR00603 Cytochrome C1 signature 513 533 3.4E-62 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 PRINTS PR00603 Cytochrome C1 signature 445 464 3.4E-62 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 PRINTS PR00603 Cytochrome C1 signature 546 570 3.4E-62 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 PRINTS PR00603 Cytochrome C1 signature 634 653 3.4E-62 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 PRINTS PR00603 Cytochrome C1 signature 653 668 3.4E-62 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 PRINTS PR00603 Cytochrome C1 signature 614 633 3.4E-62 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 PRINTS PR00603 Cytochrome C1 signature 465 484 3.4E-62 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 PRINTS PR00603 Cytochrome C1 signature 603 614 3.4E-62 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 SUPERFAMILY SSF81648 278 397 4.36E-43 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 275 376 2.8E-41 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 NHAM_RS16600 52590d0f9784f752f377fa98b61b88a7 688 PANTHER PTHR19271:SF9 11 420 1.1E-251 T 22-04-2016 NHAM_RS09105 cff61dcc146dd4c40382b8cb5bd64e5e 537 Gene3D G3DSA:3.20.20.80 58 307 7.8E-28 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS09105 cff61dcc146dd4c40382b8cb5bd64e5e 537 SUPERFAMILY SSF51445 14 307 3.54E-54 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS09105 cff61dcc146dd4c40382b8cb5bd64e5e 537 PANTHER PTHR16631 1 318 1.6E-171 T 22-04-2016 NHAM_RS09105 cff61dcc146dd4c40382b8cb5bd64e5e 537 PANTHER PTHR16631:SF5 1 318 1.6E-171 T 22-04-2016 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 Gene3D G3DSA:3.30.450.40 575 651 4.2E-7 T 22-04-2016 IPR029016 GAF domain-like NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 Gene3D G3DSA:1.20.120.620 397 500 1.7E-27 T 22-04-2016 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 664 731 1.9E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 SUPERFAMILY SSF52540 28 144 6.67E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 SUPERFAMILY SSF47384 655 731 1.24E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 Pfam PF13492 GAF domain 546 644 1.4E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 PANTHER PTHR24423:SF562 610 888 6.1E-137 T 22-04-2016 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 PANTHER PTHR24423:SF562 21 198 6.1E-137 T 22-04-2016 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 Gene3D G3DSA:3.40.50.300 21 230 2.2E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 Gene3D G3DSA:1.10.287.130 656 716 4.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 PANTHER PTHR24423 610 888 6.1E-137 T 22-04-2016 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 PANTHER PTHR24423 21 198 6.1E-137 T 22-04-2016 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 Gene3D G3DSA:3.40.50.620 245 365 2.1E-10 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 SUPERFAMILY SSF55874 721 889 6.16E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 231 2.9E-93 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 Pfam PF13493 Domain of unknown function (DUF4118) 401 504 6.6E-28 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 SMART SM00387 775 891 1.1E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 SUPERFAMILY SSF55781 588 651 3.93E-8 T 22-04-2016 IPR029016 GAF domain-like NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 867 7.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 812 826 7.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 830 840 7.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 SMART SM00388 663 731 1.8E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 Gene3D G3DSA:3.30.565.10 717 889 7.5E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 SUPERFAMILY SSF52402 252 366 2.68E-10 T 22-04-2016 NHAM_RS15330 f1396ced80e9ff8b8c71d6db02b1fbf5 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 780 889 1.5E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS10665 47b0dce754d0612ea0e5c410ae34189c 71 Pfam PF11160 Protein of unknown function (DUF2945) 8 67 1.3E-26 T 22-04-2016 IPR021331 Protein of unknown function DUF2945 NHAM_RS17485 6ed80d3f6cbd883b535e363f6c2c6c6d 409 Gene3D G3DSA:2.40.110.10 132 218 9.0E-25 T 22-04-2016 NHAM_RS17485 6ed80d3f6cbd883b535e363f6c2c6c6d 409 Gene3D G3DSA:1.20.140.10 219 405 3.4E-41 T 22-04-2016 NHAM_RS17485 6ed80d3f6cbd883b535e363f6c2c6c6d 409 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 36 100 3.5E-5 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NHAM_RS17485 6ed80d3f6cbd883b535e363f6c2c6c6d 409 PANTHER PTHR10909:SF316 38 387 1.8E-48 T 22-04-2016 NHAM_RS17485 6ed80d3f6cbd883b535e363f6c2c6c6d 409 PIRSF PIRSF016578 12 409 6.6E-108 T 22-04-2016 NHAM_RS17485 6ed80d3f6cbd883b535e363f6c2c6c6d 409 Gene3D G3DSA:1.10.540.10 14 125 4.6E-33 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NHAM_RS17485 6ed80d3f6cbd883b535e363f6c2c6c6d 409 PANTHER PTHR10909 38 387 1.8E-48 T 22-04-2016 NHAM_RS17485 6ed80d3f6cbd883b535e363f6c2c6c6d 409 SUPERFAMILY SSF56645 24 221 5.1E-31 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NHAM_RS17485 6ed80d3f6cbd883b535e363f6c2c6c6d 409 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 257 387 4.7E-36 T 22-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NHAM_RS17485 6ed80d3f6cbd883b535e363f6c2c6c6d 409 SUPERFAMILY SSF47203 246 384 1.03E-16 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS12370 6a5807efb9f485c4b1541b827be06324 283 Gene3D G3DSA:3.40.50.620 6 179 1.3E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS12370 6a5807efb9f485c4b1541b827be06324 283 PANTHER PTHR21299:SF1 1 281 5.3E-121 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 NHAM_RS12370 6a5807efb9f485c4b1541b827be06324 283 Hamap MF_00158 Pantothenate synthetase [panC]. 6 283 36.905 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 NHAM_RS12370 6a5807efb9f485c4b1541b827be06324 283 Gene3D G3DSA:3.30.1300.10 180 282 2.5E-30 T 22-04-2016 NHAM_RS12370 6a5807efb9f485c4b1541b827be06324 283 SUPERFAMILY SSF52374 6 283 9.92E-98 T 22-04-2016 NHAM_RS12370 6a5807efb9f485c4b1541b827be06324 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 7 282 9.1E-87 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 NHAM_RS12370 6a5807efb9f485c4b1541b827be06324 283 Pfam PF02569 Pantoate-beta-alanine ligase 7 281 1.7E-94 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 NHAM_RS12370 6a5807efb9f485c4b1541b827be06324 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 28 86 8.7E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NHAM_RS12370 6a5807efb9f485c4b1541b827be06324 283 PANTHER PTHR21299 1 281 5.3E-121 T 22-04-2016 NHAM_RS02015 2a496300194f20a31d169bedae1f9312 325 PANTHER PTHR35007 15 324 2.3E-92 T 22-04-2016 NHAM_RS02015 2a496300194f20a31d169bedae1f9312 325 PANTHER PTHR35007:SF2 15 324 2.3E-92 T 22-04-2016 NHAM_RS02015 2a496300194f20a31d169bedae1f9312 325 Pfam PF00482 Type II secretion system (T2SS), protein F 185 313 1.1E-19 T 22-04-2016 IPR018076 Type II secretion system F domain NHAM_RS11830 d0e821ea49d3d653295f5bfa4a843b8f 344 PANTHER PTHR10799:SF750 11 19 6.2E-31 T 22-04-2016 NHAM_RS11830 d0e821ea49d3d653295f5bfa4a843b8f 344 PANTHER PTHR10799:SF750 200 328 6.2E-31 T 22-04-2016 NHAM_RS11830 d0e821ea49d3d653295f5bfa4a843b8f 344 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 165 329 1.3E-50 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS11830 d0e821ea49d3d653295f5bfa4a843b8f 344 SUPERFAMILY SSF55073 172 329 5.57E-47 T 22-04-2016 IPR029787 Nucleotide cyclase NHAM_RS11830 d0e821ea49d3d653295f5bfa4a843b8f 344 PANTHER PTHR10799 11 19 6.2E-31 T 22-04-2016 NHAM_RS11830 d0e821ea49d3d653295f5bfa4a843b8f 344 PANTHER PTHR10799 200 328 6.2E-31 T 22-04-2016 NHAM_RS11830 d0e821ea49d3d653295f5bfa4a843b8f 344 SMART SM00267 156 330 3.2E-58 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS11830 d0e821ea49d3d653295f5bfa4a843b8f 344 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 326 1.7E-46 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS11830 d0e821ea49d3d653295f5bfa4a843b8f 344 Gene3D G3DSA:3.30.70.270 169 329 7.7E-53 T 22-04-2016 NHAM_RS04080 55133416f2d811bba69ef76f81524d5e 44 SUPERFAMILY SSF56349 2 35 8.54E-7 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS04080 55133416f2d811bba69ef76f81524d5e 44 Gene3D G3DSA:1.10.443.10 2 36 1.6E-5 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS06705 5dd01b7f93509cba14d6f4aa0274e221 330 SUPERFAMILY SSF54826 7 115 6.01E-31 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NHAM_RS06705 5dd01b7f93509cba14d6f4aa0274e221 330 PANTHER PTHR13794 1 325 1.4E-111 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 NHAM_RS06705 5dd01b7f93509cba14d6f4aa0274e221 330 Pfam PF13378 Enolase C-terminal domain-like 149 290 2.2E-26 T 22-04-2016 IPR029065 Enolase C-terminal domain-like NHAM_RS06705 5dd01b7f93509cba14d6f4aa0274e221 330 Gene3D G3DSA:3.30.390.10 6 105 1.2E-36 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NHAM_RS06705 5dd01b7f93509cba14d6f4aa0274e221 330 PANTHER PTHR13794:SF60 1 325 1.4E-111 T 22-04-2016 NHAM_RS06705 5dd01b7f93509cba14d6f4aa0274e221 330 SUPERFAMILY SSF51604 125 330 3.54E-53 T 22-04-2016 IPR029065 Enolase C-terminal domain-like NHAM_RS06705 5dd01b7f93509cba14d6f4aa0274e221 330 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 115 1.2E-10 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NHAM_RS06705 5dd01b7f93509cba14d6f4aa0274e221 330 Gene3D G3DSA:3.20.20.120 124 320 8.2E-57 T 22-04-2016 IPR029065 Enolase C-terminal domain-like NHAM_RS06705 5dd01b7f93509cba14d6f4aa0274e221 330 SMART SM00922 134 225 9.0E-20 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NHAM_RS11530 42ab0028a8e52a753c9f3ea4b8e446ec 749 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 600 628 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 NHAM_RS11530 42ab0028a8e52a753c9f3ea4b8e446ec 749 PANTHER PTHR21666 564 732 7.5E-53 T 22-04-2016 NHAM_RS11530 42ab0028a8e52a753c9f3ea4b8e446ec 749 Gene3D G3DSA:1.25.20.10 124 489 4.3E-37 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 NHAM_RS11530 42ab0028a8e52a753c9f3ea4b8e446ec 749 PANTHER PTHR21666:SF223 564 732 7.5E-53 T 22-04-2016 NHAM_RS11530 42ab0028a8e52a753c9f3ea4b8e446ec 749 SUPERFAMILY SSF53955 591 735 9.48E-39 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS11530 42ab0028a8e52a753c9f3ea4b8e446ec 749 Pfam PF01464 Transglycosylase SLT domain 590 693 1.7E-21 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 NHAM_RS11530 42ab0028a8e52a753c9f3ea4b8e446ec 749 SUPERFAMILY SSF48435 120 568 9.55E-93 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 NHAM_RS11530 42ab0028a8e52a753c9f3ea4b8e446ec 749 Gene3D G3DSA:1.10.530.10 592 737 6.9E-38 T 22-04-2016 NHAM_RS00205 a64422375f4f85530d743e1e0c1f5a77 174 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 169 1.4E-88 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 NHAM_RS00205 a64422375f4f85530d743e1e0c1f5a77 174 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 173 50.913 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 NHAM_RS00205 a64422375f4f85530d743e1e0c1f5a77 174 SUPERFAMILY SSF54637 4 169 5.03E-54 T 22-04-2016 IPR029069 HotDog domain NHAM_RS00205 a64422375f4f85530d743e1e0c1f5a77 174 Pfam PF07977 FabA-like domain 29 159 1.2E-49 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NHAM_RS00205 a64422375f4f85530d743e1e0c1f5a77 174 Gene3D G3DSA:3.10.129.10 2 169 3.2E-56 T 22-04-2016 IPR029069 HotDog domain NHAM_RS10520 284920b346eac61bfa4b48a14998bf3c 346 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 NHAM_RS10520 284920b346eac61bfa4b48a14998bf3c 346 PANTHER PTHR10314:SF83 1 340 6.5E-146 T 22-04-2016 NHAM_RS10520 284920b346eac61bfa4b48a14998bf3c 346 SUPERFAMILY SSF53686 1 329 2.23E-92 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS10520 284920b346eac61bfa4b48a14998bf3c 346 Gene3D G3DSA:3.40.50.1100 43 137 2.4E-35 T 22-04-2016 NHAM_RS10520 284920b346eac61bfa4b48a14998bf3c 346 Gene3D G3DSA:3.40.50.1100 157 325 5.1E-66 T 22-04-2016 NHAM_RS10520 284920b346eac61bfa4b48a14998bf3c 346 Gene3D G3DSA:3.40.50.1100 2 42 5.1E-66 T 22-04-2016 NHAM_RS10520 284920b346eac61bfa4b48a14998bf3c 346 PANTHER PTHR10314 1 340 6.5E-146 T 22-04-2016 NHAM_RS10520 284920b346eac61bfa4b48a14998bf3c 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 307 7.7E-66 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS10010 85b81e0d972da8445f66791d61f3447b 79 SUPERFAMILY SSF81469 40 78 1.7E-10 T 22-04-2016 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 NHAM_RS10010 85b81e0d972da8445f66791d61f3447b 79 Pfam PF07835 Bacterial aa3 type cytochrome c oxidase subunit IV 33 78 6.5E-18 T 22-04-2016 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 NHAM_RS04640 051d89dbf34e9c37211b2fbc0db2c556 499 SUPERFAMILY SSF53098 126 285 3.79E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS04640 051d89dbf34e9c37211b2fbc0db2c556 499 PANTHER PTHR35004:SF2 2 443 5.2E-182 T 22-04-2016 NHAM_RS04640 051d89dbf34e9c37211b2fbc0db2c556 499 Pfam PF00665 Integrase core domain 127 253 2.4E-17 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS04640 051d89dbf34e9c37211b2fbc0db2c556 499 Gene3D G3DSA:1.10.10.10 16 41 3.0E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04640 051d89dbf34e9c37211b2fbc0db2c556 499 Gene3D G3DSA:3.30.420.10 127 290 1.8E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS04640 051d89dbf34e9c37211b2fbc0db2c556 499 PANTHER PTHR35004 2 443 5.2E-182 T 22-04-2016 NHAM_RS19050 051d89dbf34e9c37211b2fbc0db2c556 499 SUPERFAMILY SSF53098 126 285 3.79E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS19050 051d89dbf34e9c37211b2fbc0db2c556 499 PANTHER PTHR35004:SF2 2 443 5.2E-182 T 22-04-2016 NHAM_RS19050 051d89dbf34e9c37211b2fbc0db2c556 499 Pfam PF00665 Integrase core domain 127 253 2.4E-17 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS19050 051d89dbf34e9c37211b2fbc0db2c556 499 Gene3D G3DSA:1.10.10.10 16 41 3.0E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS19050 051d89dbf34e9c37211b2fbc0db2c556 499 Gene3D G3DSA:3.30.420.10 127 290 1.8E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS19050 051d89dbf34e9c37211b2fbc0db2c556 499 PANTHER PTHR35004 2 443 5.2E-182 T 22-04-2016 NHAM_RS24115 60406b8d313e31b9d8e1031d298064e2 422 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 31 84 9.8E-9 T 22-04-2016 IPR006521 Tail protein I NHAM_RS24115 60406b8d313e31b9d8e1031d298064e2 422 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 124 7.9E-13 T 22-04-2016 IPR006521 Tail protein I NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 PANTHER PTHR30381:SF0 7 374 1.0E-174 T 22-04-2016 NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 Hamap MF_00416 Flagellar P-ring protein [flgI]. 11 374 36.842 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 Pfam PF02119 Flagellar P-ring protein 32 373 5.4E-142 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 PRINTS PR01010 Flagellar P-ring protein signature 114 131 4.4E-81 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 PRINTS PR01010 Flagellar P-ring protein signature 171 189 4.4E-81 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 PRINTS PR01010 Flagellar P-ring protein signature 261 273 4.4E-81 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 PRINTS PR01010 Flagellar P-ring protein signature 67 82 4.4E-81 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 PRINTS PR01010 Flagellar P-ring protein signature 47 62 4.4E-81 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 PRINTS PR01010 Flagellar P-ring protein signature 131 149 4.4E-81 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 PRINTS PR01010 Flagellar P-ring protein signature 197 215 4.4E-81 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 PRINTS PR01010 Flagellar P-ring protein signature 32 47 4.4E-81 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 PRINTS PR01010 Flagellar P-ring protein signature 92 111 4.4E-81 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NHAM_RS06865 1ae3651d3b54ebce52f6f2ee57a84bd6 374 PANTHER PTHR30381 7 374 1.0E-174 T 22-04-2016 NHAM_RS13675 7db46921cb7b2ad5cf73e2482286c5cd 534 Gene3D G3DSA:1.10.150.20 194 245 1.8E-4 T 22-04-2016 NHAM_RS13675 7db46921cb7b2ad5cf73e2482286c5cd 534 Pfam PF00817 impB/mucB/samB family 42 161 1.5E-6 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS13675 7db46921cb7b2ad5cf73e2482286c5cd 534 PANTHER PTHR35369 15 534 1.5E-161 T 22-04-2016 NHAM_RS13675 7db46921cb7b2ad5cf73e2482286c5cd 534 SUPERFAMILY SSF56672 14 245 3.56E-37 T 22-04-2016 NHAM_RS13675 7db46921cb7b2ad5cf73e2482286c5cd 534 PANTHER PTHR35369:SF2 15 534 1.5E-161 T 22-04-2016 NHAM_RS04735 062961260b634e6e95bca6542285d739 214 PANTHER PTHR11260:SF289 8 214 1.3E-84 T 22-04-2016 NHAM_RS04735 062961260b634e6e95bca6542285d739 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 85 1.4E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NHAM_RS04735 062961260b634e6e95bca6542285d739 214 Gene3D G3DSA:3.40.30.10 8 93 1.8E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS04735 062961260b634e6e95bca6542285d739 214 PANTHER PTHR11260 8 214 1.3E-84 T 22-04-2016 NHAM_RS04735 062961260b634e6e95bca6542285d739 214 SUPERFAMILY SSF52833 6 88 2.77E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS04735 062961260b634e6e95bca6542285d739 214 Pfam PF13410 Glutathione S-transferase, C-terminal domain 142 182 1.2E-6 T 22-04-2016 NHAM_RS04735 062961260b634e6e95bca6542285d739 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 8 213 3.4E-75 T 22-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 NHAM_RS04735 062961260b634e6e95bca6542285d739 214 Gene3D G3DSA:1.20.1050.10 94 214 2.9E-43 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS04735 062961260b634e6e95bca6542285d739 214 SUPERFAMILY SSF47616 85 213 4.73E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 Gene3D G3DSA:3.30.450.20 361 481 1.0E-20 T 22-04-2016 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 367 490 3.0E-19 T 22-04-2016 IPR000014 PAS domain NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 496 617 1.7E-10 T 22-04-2016 IPR000014 PAS domain NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 SUPERFAMILY SSF55785 373 487 3.14E-20 T 22-04-2016 IPR000014 PAS domain NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 SUPERFAMILY SSF55785 481 608 5.58E-19 T 22-04-2016 IPR000014 PAS domain NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 SUPERFAMILY SSF55874 733 884 2.23E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 Pfam PF00672 HAMP domain 279 347 3.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 Pfam PF08448 PAS fold 503 613 9.6E-16 T 22-04-2016 IPR013656 PAS fold-4 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 SUPERFAMILY SSF158472 298 348 1.15E-6 T 22-04-2016 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 SMART SM00091 496 562 2.1 T 22-04-2016 IPR000014 PAS domain NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 SMART SM00091 368 435 0.0065 T 22-04-2016 IPR000014 PAS domain NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 Gene3D G3DSA:3.30.565.10 734 883 6.0E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 PANTHER PTHR24423 643 675 1.2E-171 T 22-04-2016 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 PANTHER PTHR24423 47 626 1.2E-171 T 22-04-2016 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 PANTHER PTHR24423 695 884 1.2E-171 T 22-04-2016 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 Gene3D G3DSA:3.30.450.20 482 604 8.3E-19 T 22-04-2016 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 SMART SM00086 569 611 210.0 T 22-04-2016 IPR001610 PAC motif NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 SMART SM00086 442 484 1.5E-7 T 22-04-2016 IPR001610 PAC motif NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 Pfam PF08447 PAS fold 392 478 9.5E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 842 3.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 PRINTS PR00344 Bacterial sensor protein C-terminal signature 845 863 3.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 883 3.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 PRINTS PR00344 Bacterial sensor protein C-terminal signature 814 828 3.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 PANTHER PTHR24423:SF445 643 675 1.2E-171 T 22-04-2016 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 PANTHER PTHR24423:SF445 47 626 1.2E-171 T 22-04-2016 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 PANTHER PTHR24423:SF445 695 884 1.2E-171 T 22-04-2016 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 779 883 1.3E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 SMART SM00304 298 351 8.3E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS11095 8d389f44704a0d4270bdd5a0b95efa61 893 SMART SM00387 773 886 1.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS06140 d0d96a6ccb66ca440cdd9b36e3cbf7a2 287 Gene3D G3DSA:3.40.50.300 94 230 8.1E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06140 d0d96a6ccb66ca440cdd9b36e3cbf7a2 287 PANTHER PTHR30050:SF6 1 243 6.8E-114 T 22-04-2016 NHAM_RS06140 d0d96a6ccb66ca440cdd9b36e3cbf7a2 287 SMART SM00382 97 233 1.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS06140 d0d96a6ccb66ca440cdd9b36e3cbf7a2 287 PIRSF PIRSF003073 1 251 2.4E-71 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein NHAM_RS06140 d0d96a6ccb66ca440cdd9b36e3cbf7a2 287 PANTHER PTHR30050 1 243 6.8E-114 T 22-04-2016 NHAM_RS06140 d0d96a6ccb66ca440cdd9b36e3cbf7a2 287 SUPERFAMILY SSF52540 92 231 5.17E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06140 d0d96a6ccb66ca440cdd9b36e3cbf7a2 287 Pfam PF01695 IstB-like ATP binding protein 54 229 4.4E-58 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 NHAM_RS16090 0149112318b91cb0e32ad78441e5adb7 242 SUPERFAMILY SSF52172 21 183 1.71E-38 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS16090 0149112318b91cb0e32ad78441e5adb7 242 PANTHER PTHR26402:SF596 21 240 5.3E-82 T 22-04-2016 NHAM_RS16090 0149112318b91cb0e32ad78441e5adb7 242 Pfam PF00072 Response regulator receiver domain 24 131 6.5E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS16090 0149112318b91cb0e32ad78441e5adb7 242 Gene3D G3DSA:3.40.50.2300 19 138 5.2E-37 T 22-04-2016 NHAM_RS16090 0149112318b91cb0e32ad78441e5adb7 242 Gene3D G3DSA:1.10.10.10 148 239 5.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS16090 0149112318b91cb0e32ad78441e5adb7 242 SUPERFAMILY SSF46894 149 238 2.72E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS16090 0149112318b91cb0e32ad78441e5adb7 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 169 238 6.6E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS16090 0149112318b91cb0e32ad78441e5adb7 242 SMART SM00448 21 131 3.1E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS16090 0149112318b91cb0e32ad78441e5adb7 242 PANTHER PTHR26402 21 240 5.3E-82 T 22-04-2016 NHAM_RS16090 0149112318b91cb0e32ad78441e5adb7 242 SMART SM00862 167 238 7.1E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 PANTHER PTHR11735 1 343 2.5E-131 T 22-04-2016 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 Gene3D G3DSA:3.30.420.40 1 162 4.1E-38 T 22-04-2016 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 340 60.67 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 322 1.2E-113 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 7.4E-43 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 134 146 7.4E-43 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 7.4E-43 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.4E-43 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 7.4E-43 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 272 281 7.4E-43 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 315 3.2E-88 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 PANTHER PTHR11735:SF6 1 343 2.5E-131 T 22-04-2016 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 SUPERFAMILY SSF53067 3 126 1.88E-25 T 22-04-2016 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 SUPERFAMILY SSF53067 106 318 6.22E-35 T 22-04-2016 NHAM_RS02910 e7e7b2f1f026c5dd2c1817de50411e70 357 Pfam PF00814 Glycoprotease family 28 316 1.0E-89 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 Hamap MF_00505 Chaperone protein HtpG [htpG]. 9 630 28.963 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 SUPERFAMILY SSF54211 239 488 1.67E-82 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 SMART SM00387 34 181 1.1E-4 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 PIRSF PIRSF002583 2 637 2.4E-184 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 Pfam PF00183 Hsp90 protein 234 634 4.3E-101 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 PRINTS PR00775 90kDa heat shock protein signature 12 32 6.5E-52 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 PRINTS PR00775 90kDa heat shock protein signature 33 55 6.5E-52 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 PRINTS PR00775 90kDa heat shock protein signature 100 117 6.5E-52 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 PRINTS PR00775 90kDa heat shock protein signature 204 222 6.5E-52 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 PRINTS PR00775 90kDa heat shock protein signature 133 155 6.5E-52 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 PRINTS PR00775 90kDa heat shock protein signature 186 203 6.5E-52 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 PRINTS PR00775 90kDa heat shock protein signature 82 99 6.5E-52 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 PANTHER PTHR11528:SF44 1 633 3.8E-247 T 22-04-2016 NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 167 5.0E-11 T 22-04-2016 NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 Gene3D G3DSA:3.30.565.10 12 226 4.4E-71 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 SUPERFAMILY SSF110942 516 629 7.45E-26 T 22-04-2016 NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 SUPERFAMILY SSF55874 12 225 1.41E-57 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 PANTHER PTHR11528 1 633 3.8E-247 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 NHAM_RS18635 e95b4e5986dbc7e90c0107298669cb23 638 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 32 41 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 NHAM_RS13405 326f0d16d29b4c4cb13162b130dc499f 233 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 39 53 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NHAM_RS13405 326f0d16d29b4c4cb13162b130dc499f 233 PIRSF PIRSF001461 7 231 1.3E-85 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NHAM_RS13405 326f0d16d29b4c4cb13162b130dc499f 233 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 12 212 2.9E-83 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NHAM_RS13405 326f0d16d29b4c4cb13162b130dc499f 233 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 141 163 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NHAM_RS13405 326f0d16d29b4c4cb13162b130dc499f 233 Pfam PF00834 Ribulose-phosphate 3 epimerase family 12 206 1.5E-78 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NHAM_RS13405 326f0d16d29b4c4cb13162b130dc499f 233 Gene3D G3DSA:3.20.20.70 10 228 4.6E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS13405 326f0d16d29b4c4cb13162b130dc499f 233 SUPERFAMILY SSF51366 10 222 5.72E-72 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NHAM_RS13405 326f0d16d29b4c4cb13162b130dc499f 233 PANTHER PTHR11749 8 232 1.8E-119 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NHAM_RS03985 e838ee3d807f72e72a12d43adf044776 366 PIRSF PIRSF001456 3 364 7.7E-135 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS03985 e838ee3d807f72e72a12d43adf044776 366 Pfam PF01264 Chorismate synthase 10 357 6.1E-135 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS03985 e838ee3d807f72e72a12d43adf044776 366 Hamap MF_00300 Chorismate synthase [aroC]. 10 364 36.697 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS03985 e838ee3d807f72e72a12d43adf044776 366 SUPERFAMILY SSF103263 3 362 1.03E-139 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS03985 e838ee3d807f72e72a12d43adf044776 366 Gene3D G3DSA:3.60.150.10 9 362 3.3E-152 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS03985 e838ee3d807f72e72a12d43adf044776 366 ProSitePatterns PS00788 Chorismate synthase signature 2. 128 144 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS03985 e838ee3d807f72e72a12d43adf044776 366 TIGRFAM TIGR00033 aroC: chorismate synthase 10 361 1.6E-129 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS03985 e838ee3d807f72e72a12d43adf044776 366 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS03985 e838ee3d807f72e72a12d43adf044776 366 ProSitePatterns PS00789 Chorismate synthase signature 3. 331 347 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS03985 e838ee3d807f72e72a12d43adf044776 366 PANTHER PTHR21085 2 362 2.5E-195 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 SUPERFAMILY SSF51735 1 176 2.61E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 SMART SM00846 3 153 3.0E-96 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 153 1.8E-57 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 SUPERFAMILY SSF55347 153 315 3.43E-69 T 22-04-2016 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 2.8E-64 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 5.7E-129 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 PANTHER PTHR10836 1 333 1.6E-204 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 Gene3D G3DSA:3.40.50.720 1 161 2.4E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 Gene3D G3DSA:3.30.360.10 162 316 1.8E-73 T 22-04-2016 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 2.5E-38 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 2.5E-38 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 2.5E-38 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 2.5E-38 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 2.5E-38 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 PANTHER PTHR10836:SF50 1 333 1.6E-204 T 22-04-2016 NHAM_RS18125 38955829d47b5b5585e514c0e149e8db 335 PIRSF PIRSF000149 1 335 1.8E-139 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 NHAM_RS20670 12665957dbd1135883088ff2714c511c 258 Pfam PF02661 Fic/DOC family 10 83 2.1E-16 T 22-04-2016 IPR003812 Fido domain NHAM_RS20670 12665957dbd1135883088ff2714c511c 258 SUPERFAMILY SSF140931 9 153 1.07E-28 T 22-04-2016 IPR003812 Fido domain NHAM_RS20670 12665957dbd1135883088ff2714c511c 258 Gene3D G3DSA:1.10.3290.10 7 156 4.6E-30 T 22-04-2016 IPR003812 Fido domain NHAM_RS20670 12665957dbd1135883088ff2714c511c 258 PANTHER PTHR13504 8 252 5.3E-19 T 22-04-2016 NHAM_RS02315 9b6448767ddedc339fe4b180576c7a06 538 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 253 268 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 NHAM_RS02315 9b6448767ddedc339fe4b180576c7a06 538 SUPERFAMILY SSF68923 11 215 1.62E-78 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 NHAM_RS02315 9b6448767ddedc339fe4b180576c7a06 538 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 17 533 6.5E-199 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 NHAM_RS02315 9b6448767ddedc339fe4b180576c7a06 538 PANTHER PTHR30031 20 534 4.4E-285 T 22-04-2016 NHAM_RS02315 9b6448767ddedc339fe4b180576c7a06 538 PANTHER PTHR30031:SF0 20 534 4.4E-285 T 22-04-2016 NHAM_RS02315 9b6448767ddedc339fe4b180576c7a06 538 Pfam PF01293 Phosphoenolpyruvate carboxykinase 23 484 2.4E-208 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 NHAM_RS02315 9b6448767ddedc339fe4b180576c7a06 538 PIRSF PIRSF006294 7 533 1.1E-220 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 NHAM_RS02315 9b6448767ddedc339fe4b180576c7a06 538 Gene3D G3DSA:3.40.449.10 24 214 9.6E-71 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 NHAM_RS02315 9b6448767ddedc339fe4b180576c7a06 538 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 17 533 55.121 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 NHAM_RS02315 9b6448767ddedc339fe4b180576c7a06 538 SUPERFAMILY SSF53795 216 533 1.14E-134 T 22-04-2016 NHAM_RS02315 9b6448767ddedc339fe4b180576c7a06 538 Gene3D G3DSA:3.90.228.20 216 278 1.1E-116 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 NHAM_RS02315 9b6448767ddedc339fe4b180576c7a06 538 Gene3D G3DSA:3.90.228.20 340 531 1.1E-116 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 NHAM_RS02275 8237fb8888c00d3ba1df7e2c6d54285f 320 SUPERFAMILY SSF55166 55 316 1.18E-100 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NHAM_RS02275 8237fb8888c00d3ba1df7e2c6d54285f 320 Pfam PF03411 Penicillin-insensitive murein endopeptidase 71 313 3.3E-106 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 NHAM_RS02275 8237fb8888c00d3ba1df7e2c6d54285f 320 Gene3D G3DSA:3.30.1380.10 55 316 9.8E-106 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NHAM_RS02275 8237fb8888c00d3ba1df7e2c6d54285f 320 PIRSF PIRSF018455 26 320 1.2E-122 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 NHAM_RS06695 780761a453d0ac1d64e50072cf168dc3 349 PANTHER PTHR12526 1 336 1.5E-79 T 22-04-2016 NHAM_RS06695 780761a453d0ac1d64e50072cf168dc3 349 Gene3D G3DSA:3.40.50.2000 173 299 5.4E-18 T 22-04-2016 NHAM_RS06695 780761a453d0ac1d64e50072cf168dc3 349 PANTHER PTHR12526:SF363 1 336 1.5E-79 T 22-04-2016 NHAM_RS06695 780761a453d0ac1d64e50072cf168dc3 349 Pfam PF13439 Glycosyltransferase Family 4 15 164 7.4E-15 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NHAM_RS06695 780761a453d0ac1d64e50072cf168dc3 349 Pfam PF13692 Glycosyl transferases group 1 179 293 7.0E-18 T 22-04-2016 NHAM_RS06695 780761a453d0ac1d64e50072cf168dc3 349 SUPERFAMILY SSF53756 1 324 5.23E-62 T 22-04-2016 NHAM_RS16705 db7b2694bd824fe8c364dc05826749ce 318 SUPERFAMILY SSF47240 3 150 3.75E-30 T 22-04-2016 IPR009078 Ferritin-like superfamily NHAM_RS16705 db7b2694bd824fe8c364dc05826749ce 318 Pfam PF02915 Rubrerythrin 11 144 1.7E-27 T 22-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 NHAM_RS16705 db7b2694bd824fe8c364dc05826749ce 318 PANTHER PTHR33531:SF4 7 169 7.4E-38 T 22-04-2016 NHAM_RS16705 db7b2694bd824fe8c364dc05826749ce 318 PANTHER PTHR33531 7 169 7.4E-38 T 22-04-2016 NHAM_RS16705 db7b2694bd824fe8c364dc05826749ce 318 Gene3D G3DSA:1.20.1260.10 4 142 1.1E-26 T 22-04-2016 IPR012347 Ferritin-related NHAM_RS16705 db7b2694bd824fe8c364dc05826749ce 318 PIRSF PIRSF035918 1 318 3.6E-150 T 22-04-2016 IPR017040 Uncharacterised conserved protein UCP035918 , rubrerythrin/DUF125-related NHAM_RS08430 48fdfcde6e5fbbb06cff813b2d1c7e51 347 Pfam PF01734 Patatin-like phospholipase 30 188 8.6E-22 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NHAM_RS08430 48fdfcde6e5fbbb06cff813b2d1c7e51 347 SUPERFAMILY SSF52151 24 325 4.88E-56 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NHAM_RS08430 48fdfcde6e5fbbb06cff813b2d1c7e51 347 PANTHER PTHR14226:SF24 25 326 4.6E-107 T 22-04-2016 NHAM_RS08430 48fdfcde6e5fbbb06cff813b2d1c7e51 347 PANTHER PTHR14226 25 326 4.6E-107 T 22-04-2016 NHAM_RS08430 48fdfcde6e5fbbb06cff813b2d1c7e51 347 Gene3D G3DSA:3.40.1090.10 30 277 1.1E-11 T 22-04-2016 NHAM_RS13645 5f8ca41fadd6c5d471ed1b06ba61f6b5 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 2.2E-77 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NHAM_RS13645 5f8ca41fadd6c5d471ed1b06ba61f6b5 259 Gene3D G3DSA:3.90.226.10 2 255 2.0E-94 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS13645 5f8ca41fadd6c5d471ed1b06ba61f6b5 259 PANTHER PTHR11941:SF54 1 256 4.1E-115 T 22-04-2016 NHAM_RS13645 5f8ca41fadd6c5d471ed1b06ba61f6b5 259 SUPERFAMILY SSF52096 2 258 4.69E-87 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS13645 5f8ca41fadd6c5d471ed1b06ba61f6b5 259 PANTHER PTHR11941 1 256 4.1E-115 T 22-04-2016 NHAM_RS13645 5f8ca41fadd6c5d471ed1b06ba61f6b5 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NHAM_RS18980 32789db8ebad60bf03920528a732fdab 298 Hamap MF_00082_B Acetylglutamate kinase [argB]. 27 298 36.207 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS18980 32789db8ebad60bf03920528a732fdab 298 PIRSF PIRSF000728 14 298 3.5E-108 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS18980 32789db8ebad60bf03920528a732fdab 298 TIGRFAM TIGR00761 argB: acetylglutamate kinase 30 273 9.8E-77 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS18980 32789db8ebad60bf03920528a732fdab 298 SUPERFAMILY SSF53633 7 297 9.29E-91 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS18980 32789db8ebad60bf03920528a732fdab 298 Pfam PF00696 Amino acid kinase family 30 274 2.1E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS18980 32789db8ebad60bf03920528a732fdab 298 Gene3D G3DSA:3.40.1160.10 28 297 5.0E-102 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS18980 32789db8ebad60bf03920528a732fdab 298 PANTHER PTHR23342 4 298 1.7E-112 T 22-04-2016 NHAM_RS04085 f0416dc530c811925cb10344e22ca6d4 287 SMART SM00382 97 233 3.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS04085 f0416dc530c811925cb10344e22ca6d4 287 PIRSF PIRSF003073 1 251 7.7E-72 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein NHAM_RS04085 f0416dc530c811925cb10344e22ca6d4 287 PANTHER PTHR30050 1 243 9.5E-115 T 22-04-2016 NHAM_RS04085 f0416dc530c811925cb10344e22ca6d4 287 SUPERFAMILY SSF52540 92 231 2.37E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04085 f0416dc530c811925cb10344e22ca6d4 287 Pfam PF01695 IstB-like ATP binding protein 54 229 1.8E-58 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 NHAM_RS04085 f0416dc530c811925cb10344e22ca6d4 287 PANTHER PTHR30050:SF6 1 243 9.5E-115 T 22-04-2016 NHAM_RS04085 f0416dc530c811925cb10344e22ca6d4 287 Gene3D G3DSA:3.40.50.300 94 230 4.0E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02305 893c7382f20fc0164d40bd32e08c2404 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 1.4E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS02305 893c7382f20fc0164d40bd32e08c2404 233 SMART SM00448 2 112 3.1E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS02305 893c7382f20fc0164d40bd32e08c2404 233 SUPERFAMILY SSF52172 1 177 1.85E-38 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS02305 893c7382f20fc0164d40bd32e08c2404 233 Pfam PF00072 Response regulator receiver domain 4 113 7.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS02305 893c7382f20fc0164d40bd32e08c2404 233 Gene3D G3DSA:1.10.10.10 133 232 3.6E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS02305 893c7382f20fc0164d40bd32e08c2404 233 PANTHER PTHR26402:SF476 2 232 2.6E-121 T 22-04-2016 NHAM_RS02305 893c7382f20fc0164d40bd32e08c2404 233 SMART SM00862 154 230 6.0E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS02305 893c7382f20fc0164d40bd32e08c2404 233 Gene3D G3DSA:3.40.50.2300 1 124 2.0E-37 T 22-04-2016 NHAM_RS02305 893c7382f20fc0164d40bd32e08c2404 233 PANTHER PTHR26402 2 232 2.6E-121 T 22-04-2016 NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 Pfam PF00586 AIR synthase related protein, N-terminal domain 438 554 2.2E-21 T 22-04-2016 IPR016188 PurM-like, N-terminal domain NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 Pfam PF00586 AIR synthase related protein, N-terminal domain 87 188 4.4E-23 T 22-04-2016 IPR016188 PurM-like, N-terminal domain NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 SUPERFAMILY SSF56042 201 423 1.79E-56 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 Gene3D G3DSA:3.90.650.10 213 356 4.9E-4 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 SUPERFAMILY SSF55326 14 195 4.49E-51 T 22-04-2016 NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 Gene3D G3DSA:3.30.1330.10 411 558 6.2E-56 T 22-04-2016 IPR016188 PurM-like, N-terminal domain NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 Gene3D G3DSA:3.30.1330.10 50 195 2.9E-48 T 22-04-2016 IPR016188 PurM-like, N-terminal domain NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 SUPERFAMILY SSF55326 398 560 4.97E-53 T 22-04-2016 NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 18 732 3.2E-285 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 Pfam PF02769 AIR synthase related protein, C-terminal domain 569 702 8.0E-20 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 Pfam PF02769 AIR synthase related protein, C-terminal domain 206 354 1.3E-32 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 PANTHER PTHR10099 18 732 0.0 T 22-04-2016 NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 PANTHER PTHR10099:SF2 18 732 0.0 T 22-04-2016 NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 SUPERFAMILY SSF56042 566 732 5.08E-37 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 PIRSF PIRSF001587 4 734 1.6E-283 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS08360 8409a66ad8428b1d53463d795809edd1 744 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 742 329.538 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 576 55.852 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 PANTHER PTHR11493 19 563 7.7E-228 T 22-04-2016 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 SUPERFAMILY SSF56014 434 566 6.67E-35 T 22-04-2016 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 565 3.6E-233 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 SUPERFAMILY SSF56014 153 349 7.72E-53 T 22-04-2016 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 Gene3D G3DSA:3.30.413.10 153 344 9.1E-59 T 22-04-2016 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 Gene3D G3DSA:3.30.413.10 433 564 1.4E-34 T 22-04-2016 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 SUPERFAMILY SSF55124 351 428 7.85E-22 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 PANTHER PTHR11493:SF47 19 563 7.7E-228 T 22-04-2016 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 484 500 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 SUPERFAMILY SSF55124 20 152 2.13E-28 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 1.3E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 PRINTS PR00397 Sirohaem Fe-binding site signature 484 502 1.3E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 Gene3D G3DSA:3.90.480.10 80 150 2.9E-56 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 Gene3D G3DSA:3.90.480.10 347 426 2.9E-56 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 181 333 1.5E-38 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 438 564 4.8E-5 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 85 143 1.8E-13 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03545 409a577a6682cc05e57b7d68075cda6f 576 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 356 423 3.1E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 NHAM_RS03350 23a8ecc2eb8a9b2fd268d168c9b04c77 135 SMART SM00448 18 126 3.4E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS03350 23a8ecc2eb8a9b2fd268d168c9b04c77 135 Gene3D G3DSA:3.40.50.2300 18 129 4.3E-16 T 22-04-2016 NHAM_RS03350 23a8ecc2eb8a9b2fd268d168c9b04c77 135 SUPERFAMILY SSF52172 19 130 8.68E-18 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS03350 23a8ecc2eb8a9b2fd268d168c9b04c77 135 Pfam PF00072 Response regulator receiver domain 20 125 1.8E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 PANTHER PTHR10357 45 713 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 PANTHER PTHR10357:SF160 45 713 0.0 T 22-04-2016 NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 Gene3D G3DSA:2.60.40.10 107 216 4.0E-35 T 22-04-2016 IPR013783 Immunoglobulin-like fold NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 Gene3D G3DSA:2.60.40.10 11 98 3.1E-13 T 22-04-2016 IPR013783 Immunoglobulin-like fold NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 Gene3D G3DSA:3.20.20.80 237 602 2.6E-92 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 SUPERFAMILY SSF51445 163 607 1.73E-111 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 PIRSF PIRSF000463 5 716 1.6E-282 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 SUPERFAMILY SSF81296 12 108 3.29E-16 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 Pfam PF00128 Alpha amylase, catalytic domain 268 337 1.2E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 619 713 4.0E-21 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 118 201 1.3E-17 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 Gene3D G3DSA:2.60.40.1180 614 713 6.2E-31 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 SUPERFAMILY SSF51011 614 714 2.52E-29 T 22-04-2016 NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 SMART SM00642 241 586 7.9E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 95 714 43.203 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 NHAM_RS07480 46e1d9826405cdbfc2769c75a4ea7edb 716 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 103 711 1.1E-274 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 NHAM_RS16335 6eba539d9dd07278571372fb5acbaa60 261 PANTHER PTHR30027:SF3 1 249 1.3E-64 T 22-04-2016 NHAM_RS16335 6eba539d9dd07278571372fb5acbaa60 261 SUPERFAMILY SSF75217 80 246 9.94E-43 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases NHAM_RS16335 6eba539d9dd07278571372fb5acbaa60 261 Pfam PF04452 RNA methyltransferase 24 240 7.5E-52 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS16335 6eba539d9dd07278571372fb5acbaa60 261 Gene3D G3DSA:3.40.1280.10 9 252 8.1E-62 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NHAM_RS16335 6eba539d9dd07278571372fb5acbaa60 261 PANTHER PTHR30027 1 249 1.3E-64 T 22-04-2016 NHAM_RS16335 6eba539d9dd07278571372fb5acbaa60 261 SUPERFAMILY SSF88697 8 67 4.47E-13 T 22-04-2016 IPR015947 PUA-like domain NHAM_RS16335 6eba539d9dd07278571372fb5acbaa60 261 PIRSF PIRSF015601 7 246 3.1E-47 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS16335 6eba539d9dd07278571372fb5acbaa60 261 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 11 245 3.6E-33 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS19230 99ac2a720bf8126b5ca2774c386a800f 141 SUPERFAMILY SSF55239 1 139 7.72E-55 T 22-04-2016 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NHAM_RS19230 99ac2a720bf8126b5ca2774c386a800f 141 PANTHER PTHR31262:SF6 6 117 1.3E-62 T 22-04-2016 NHAM_RS19230 99ac2a720bf8126b5ca2774c386a800f 141 Gene3D G3DSA:3.30.190.10 1 137 7.6E-58 T 22-04-2016 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NHAM_RS19230 99ac2a720bf8126b5ca2774c386a800f 141 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 5 103 1.1E-40 T 22-04-2016 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NHAM_RS19230 99ac2a720bf8126b5ca2774c386a800f 141 PANTHER PTHR31262 6 117 1.3E-62 T 22-04-2016 NHAM_RS19230 99ac2a720bf8126b5ca2774c386a800f 141 SMART SM00961 4 103 1.4E-50 T 22-04-2016 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 Gene3D G3DSA:3.30.390.30 321 405 2.5E-28 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 302 1.5E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 SUPERFAMILY SSF51905 193 335 5.49E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 SUPERFAMILY SSF51905 3 163 5.49E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.4E-24 T 22-04-2016 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 1.4E-24 T 22-04-2016 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 1.4E-24 T 22-04-2016 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 1.4E-24 T 22-04-2016 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.4E-24 T 22-04-2016 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 SUPERFAMILY SSF55424 315 405 7.0E-27 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 PANTHER PTHR22912 1 383 4.3E-108 T 22-04-2016 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 Gene3D G3DSA:3.50.50.60 111 310 1.9E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 Gene3D G3DSA:3.50.50.60 3 110 1.1E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 PANTHER PTHR22912:SF180 1 383 4.3E-108 T 22-04-2016 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 1.9E-18 T 22-04-2016 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.9E-18 T 22-04-2016 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 364 379 1.9E-18 T 22-04-2016 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 1.9E-18 T 22-04-2016 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 1.9E-18 T 22-04-2016 NHAM_RS13850 a81488c6a7f1123aedebfb49f2544df5 406 Pfam PF14759 Reductase C-terminal 321 404 1.4E-29 T 22-04-2016 IPR028202 Reductase, C-terminal NHAM_RS06685 c49b752d328140143acba903748fd81b 268 PANTHER PTHR20858 1 265 6.1E-120 T 22-04-2016 NHAM_RS06685 c49b752d328140143acba903748fd81b 268 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 2.8E-95 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 NHAM_RS06685 c49b752d328140143acba903748fd81b 268 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 1.4E-98 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 NHAM_RS06685 c49b752d328140143acba903748fd81b 268 SUPERFAMILY SSF53613 1 264 1.71E-79 T 22-04-2016 IPR029056 Ribokinase-like NHAM_RS06685 c49b752d328140143acba903748fd81b 268 PANTHER PTHR20858:SF17 1 265 6.1E-120 T 22-04-2016 NHAM_RS06685 c49b752d328140143acba903748fd81b 268 Gene3D G3DSA:3.40.1190.20 4 263 2.8E-102 T 22-04-2016 IPR029056 Ribokinase-like NHAM_RS07980 c838f1cf5a728f140b39ab0c3bd39048 132 Gene3D G3DSA:3.30.1490.10 76 132 6.5E-27 T 22-04-2016 NHAM_RS07980 c838f1cf5a728f140b39ab0c3bd39048 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.083 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07980 c838f1cf5a728f140b39ab0c3bd39048 132 PANTHER PTHR11758 1 132 2.2E-52 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07980 c838f1cf5a728f140b39ab0c3bd39048 132 Pfam PF00410 Ribosomal protein S8 5 132 1.4E-46 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07980 c838f1cf5a728f140b39ab0c3bd39048 132 Gene3D G3DSA:3.30.1370.30 3 73 5.7E-23 T 22-04-2016 NHAM_RS07980 c838f1cf5a728f140b39ab0c3bd39048 132 SUPERFAMILY SSF56047 3 132 1.11E-43 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07980 c838f1cf5a728f140b39ab0c3bd39048 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 Gene3D G3DSA:3.30.365.10 431 580 5.4E-27 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 Gene3D G3DSA:3.30.365.10 274 318 5.7E-5 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 155 674 6.5E-105 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 SUPERFAMILY SSF54665 4 148 1.57E-39 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 SMART SM01008 19 134 7.1E-43 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 19 134 6.1E-24 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 Gene3D G3DSA:3.30.365.10 591 731 5.5E-53 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 Gene3D G3DSA:3.30.365.10 350 430 5.5E-53 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 Gene3D G3DSA:3.30.365.10 123 191 4.8E-10 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 PANTHER PTHR11908 5 532 4.5E-273 T 22-04-2016 NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 PANTHER PTHR11908 563 731 4.5E-273 T 22-04-2016 NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 SUPERFAMILY SSF56003 134 732 2.75E-156 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 Gene3D G3DSA:3.90.1170.50 3 122 5.7E-36 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 PANTHER PTHR11908:SF71 5 532 4.5E-273 T 22-04-2016 NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 PANTHER PTHR11908:SF71 563 731 4.5E-273 T 22-04-2016 NHAM_RS05315 568f084de45541d3a58c62f49fd34d43 735 Gene3D G3DSA:3.30.365.10 192 270 2.9E-25 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS03270 8e345408e02a96f741a4fc3b43cfab25 352 SUPERFAMILY SSF88713 216 308 1.35E-30 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NHAM_RS03270 8e345408e02a96f741a4fc3b43cfab25 352 SUPERFAMILY SSF88713 54 133 1.35E-30 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NHAM_RS03270 8e345408e02a96f741a4fc3b43cfab25 352 Gene3D G3DSA:3.20.20.370 216 297 4.6E-19 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS03270 8e345408e02a96f741a4fc3b43cfab25 352 Gene3D G3DSA:3.20.20.370 68 133 4.6E-19 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS03270 8e345408e02a96f741a4fc3b43cfab25 352 Pfam PF01522 Polysaccharide deacetylase 90 286 4.7E-26 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS03270 8e345408e02a96f741a4fc3b43cfab25 352 PANTHER PTHR34216 1 147 1.8E-82 T 22-04-2016 NHAM_RS03270 8e345408e02a96f741a4fc3b43cfab25 352 PANTHER PTHR34216 211 350 1.8E-82 T 22-04-2016 NHAM_RS03270 8e345408e02a96f741a4fc3b43cfab25 352 PANTHER PTHR34216:SF1 1 147 1.8E-82 T 22-04-2016 NHAM_RS03270 8e345408e02a96f741a4fc3b43cfab25 352 PANTHER PTHR34216:SF1 211 350 1.8E-82 T 22-04-2016 NHAM_RS06095 10847cf793890008fc905a526ecfea85 385 PIRSF PIRSF000390 1 385 3.0E-99 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NHAM_RS06095 10847cf793890008fc905a526ecfea85 385 Gene3D G3DSA:3.90.1150.10 260 384 2.6E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS06095 10847cf793890008fc905a526ecfea85 385 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 382 1.5E-166 T 22-04-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase NHAM_RS06095 10847cf793890008fc905a526ecfea85 385 PANTHER PTHR30244 1 385 2.6E-125 T 22-04-2016 NHAM_RS06095 10847cf793890008fc905a526ecfea85 385 PANTHER PTHR30244:SF3 1 385 2.6E-125 T 22-04-2016 NHAM_RS06095 10847cf793890008fc905a526ecfea85 385 Gene3D G3DSA:3.40.640.10 1 258 4.5E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS06095 10847cf793890008fc905a526ecfea85 385 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 379 1.1E-99 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NHAM_RS06095 10847cf793890008fc905a526ecfea85 385 SUPERFAMILY SSF53383 2 384 5.98E-108 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS00930 90a800ffbe7c3e898b464586bf5b3ad0 230 SUPERFAMILY SSF47616 70 214 4.41E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS00930 90a800ffbe7c3e898b464586bf5b3ad0 230 Gene3D G3DSA:3.40.30.10 2 96 5.6E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00930 90a800ffbe7c3e898b464586bf5b3ad0 230 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 2.5E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NHAM_RS00930 90a800ffbe7c3e898b464586bf5b3ad0 230 PANTHER PTHR11260 1 216 8.8E-113 T 22-04-2016 NHAM_RS00930 90a800ffbe7c3e898b464586bf5b3ad0 230 SUPERFAMILY SSF52833 1 107 6.81E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00930 90a800ffbe7c3e898b464586bf5b3ad0 230 Pfam PF00043 Glutathione S-transferase, C-terminal domain 128 206 3.7E-8 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal NHAM_RS00930 90a800ffbe7c3e898b464586bf5b3ad0 230 PANTHER PTHR11260:SF286 1 216 8.8E-113 T 22-04-2016 NHAM_RS00930 90a800ffbe7c3e898b464586bf5b3ad0 230 Gene3D G3DSA:1.20.1050.10 97 225 3.7E-35 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS04005 c87cb64406440154e28b66a444eb2ff0 107 SMART SM00418 7 82 6.5E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS04005 c87cb64406440154e28b66a444eb2ff0 107 Gene3D G3DSA:1.10.10.10 5 106 2.3E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04005 c87cb64406440154e28b66a444eb2ff0 107 PANTHER PTHR33154 8 98 4.0E-23 T 22-04-2016 NHAM_RS04005 c87cb64406440154e28b66a444eb2ff0 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 1.5E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS04005 c87cb64406440154e28b66a444eb2ff0 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.5E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS04005 c87cb64406440154e28b66a444eb2ff0 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.5E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS04005 c87cb64406440154e28b66a444eb2ff0 107 Pfam PF12840 Helix-turn-helix domain 8 66 4.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04005 c87cb64406440154e28b66a444eb2ff0 107 SUPERFAMILY SSF46785 2 98 7.94E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS11930 0f60832b4e54277a3582e61d271f947e 365 PANTHER PTHR33529 2 364 1.7E-104 T 22-04-2016 NHAM_RS11930 0f60832b4e54277a3582e61d271f947e 365 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 7 362 3.6E-95 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 NHAM_RS11930 0f60832b4e54277a3582e61d271f947e 365 PANTHER PTHR33529:SF1 2 364 1.7E-104 T 22-04-2016 NHAM_RS11930 0f60832b4e54277a3582e61d271f947e 365 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 359 6.3E-54 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 NHAM_RS15605 26e2e525767c4c74946263f8710fb20e 372 SUPERFAMILY SSF53756 6 371 2.13E-121 T 22-04-2016 NHAM_RS15605 26e2e525767c4c74946263f8710fb20e 372 PANTHER PTHR18964 2 371 8.3E-156 T 22-04-2016 NHAM_RS15605 26e2e525767c4c74946263f8710fb20e 372 Gene3D G3DSA:3.40.50.2000 212 370 7.8E-59 T 22-04-2016 NHAM_RS15605 26e2e525767c4c74946263f8710fb20e 372 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 369 4.1E-116 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain NHAM_RS15605 26e2e525767c4c74946263f8710fb20e 372 PANTHER PTHR18964:SF2 2 371 8.3E-156 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 NHAM_RS15605 26e2e525767c4c74946263f8710fb20e 372 Gene3D G3DSA:3.40.50.2000 4 211 5.5E-73 T 22-04-2016 NHAM_RS15605 26e2e525767c4c74946263f8710fb20e 372 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 7 370 5.5E-141 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 NHAM_RS08685 5be128f16d364336a0adf1b188d9ed98 383 Pfam PF13180 PDZ domain 151 209 1.5E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS08685 5be128f16d364336a0adf1b188d9ed98 383 Gene3D G3DSA:2.30.42.10 119 218 3.3E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS08685 5be128f16d364336a0adf1b188d9ed98 383 PANTHER PTHR22939 148 382 4.9E-66 T 22-04-2016 NHAM_RS08685 5be128f16d364336a0adf1b188d9ed98 383 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 147 380 1.7E-44 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 NHAM_RS08685 5be128f16d364336a0adf1b188d9ed98 383 PANTHER PTHR22939:SF78 148 382 4.9E-66 T 22-04-2016 NHAM_RS08685 5be128f16d364336a0adf1b188d9ed98 383 SMART SM00228 140 208 3.9E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS08685 5be128f16d364336a0adf1b188d9ed98 383 Pfam PF02163 Peptidase family M50 23 368 4.6E-75 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 NHAM_RS08685 5be128f16d364336a0adf1b188d9ed98 383 SUPERFAMILY SSF50156 122 213 5.65E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS10415 97d19b1c218aefba70315cd0ce5479a7 241 Pfam PF03741 Integral membrane protein TerC family 15 204 9.1E-48 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 NHAM_RS10415 97d19b1c218aefba70315cd0ce5479a7 241 PANTHER PTHR30060 1 238 1.8E-106 T 22-04-2016 NHAM_RS10415 97d19b1c218aefba70315cd0ce5479a7 241 PANTHER PTHR30060:SF1 1 238 1.8E-106 T 22-04-2016 NHAM_RS04525 8cb2570736178119421af57cb04b1e1c 576 Pfam PF01740 STAS domain 455 547 8.6E-14 T 22-04-2016 IPR002645 STAS domain NHAM_RS04525 8cb2570736178119421af57cb04b1e1c 576 PANTHER PTHR11814 11 572 1.0E-220 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 NHAM_RS04525 8cb2570736178119421af57cb04b1e1c 576 PANTHER PTHR11814:SF71 11 572 1.0E-220 T 22-04-2016 NHAM_RS04525 8cb2570736178119421af57cb04b1e1c 576 Pfam PF00916 Sulfate permease family 29 395 3.6E-87 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 NHAM_RS04525 8cb2570736178119421af57cb04b1e1c 576 Gene3D G3DSA:3.30.750.24 455 544 1.6E-12 T 22-04-2016 IPR002645 STAS domain NHAM_RS04525 8cb2570736178119421af57cb04b1e1c 576 SUPERFAMILY SSF52091 455 545 9.03E-13 T 22-04-2016 IPR002645 STAS domain NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 PIRSF PIRSF001365 2 296 1.1E-96 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 SUPERFAMILY SSF51569 6 293 7.54E-105 T 22-04-2016 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 2.107234E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 2.107234E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 107 123 2.107234E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 2.107234E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 SMART SM01130 6 293 4.8E-143 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 Pfam PF00701 Dihydrodipicolinate synthetase family 6 278 6.5E-90 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 42 59 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 289 4.6E-95 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 PANTHER PTHR12128 4 296 1.7E-123 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 Gene3D G3DSA:3.20.20.70 4 295 3.5E-118 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 PANTHER PTHR12128:SF34 4 296 1.7E-123 T 22-04-2016 NHAM_RS11525 c784b44b08fb0783ecc56266195da216 296 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 6 291 61.756 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS06375 e263b304b51c71a10eff621ef077d51f 127 SUPERFAMILY SSF109755 9 87 9.42E-5 T 22-04-2016 NHAM_RS06375 e263b304b51c71a10eff621ef077d51f 127 Pfam PF09361 Phasin protein 31 125 1.3E-14 T 22-04-2016 IPR018968 Phasin NHAM_RS06375 e263b304b51c71a10eff621ef077d51f 127 TIGRFAM TIGR01985 phasin_2: phasin 10 126 2.1E-30 T 22-04-2016 IPR010234 Phasin, subfamily 2 NHAM_RS15860 9d913e80499dca44b9e17f83b09b6ba8 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 NHAM_RS15860 9d913e80499dca44b9e17f83b09b6ba8 317 PANTHER PTHR10210 1 317 3.7E-178 T 22-04-2016 NHAM_RS15860 9d913e80499dca44b9e17f83b09b6ba8 317 Gene3D G3DSA:3.40.50.2020 163 285 9.5E-48 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS15860 9d913e80499dca44b9e17f83b09b6ba8 317 PANTHER PTHR10210:SF41 1 317 3.7E-178 T 22-04-2016 NHAM_RS15860 9d913e80499dca44b9e17f83b09b6ba8 317 SMART SM01400 8 124 5.0E-75 T 22-04-2016 NHAM_RS15860 9d913e80499dca44b9e17f83b09b6ba8 317 Gene3D G3DSA:3.40.50.2020 6 162 1.4E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS15860 9d913e80499dca44b9e17f83b09b6ba8 317 SUPERFAMILY SSF53271 73 306 3.22E-62 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS15860 9d913e80499dca44b9e17f83b09b6ba8 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 9 124 4.4E-47 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 NHAM_RS15860 9d913e80499dca44b9e17f83b09b6ba8 317 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 8 317 47.82 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 NHAM_RS15860 9d913e80499dca44b9e17f83b09b6ba8 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 317 9.6E-115 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 NHAM_RS15860 9d913e80499dca44b9e17f83b09b6ba8 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 206 316 1.3E-24 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 NHAM_RS17100 e7da6ed4dd3bf13e884078642b3cf8dd 126 PANTHER PTHR35862:SF2 4 89 7.4E-22 T 22-04-2016 NHAM_RS17100 e7da6ed4dd3bf13e884078642b3cf8dd 126 SUPERFAMILY SSF160719 11 110 3.01E-27 T 22-04-2016 NHAM_RS17100 e7da6ed4dd3bf13e884078642b3cf8dd 126 Gene3D G3DSA:3.10.450.40 9 110 5.2E-32 T 22-04-2016 NHAM_RS17100 e7da6ed4dd3bf13e884078642b3cf8dd 126 PANTHER PTHR35862 4 89 7.4E-22 T 22-04-2016 NHAM_RS17100 e7da6ed4dd3bf13e884078642b3cf8dd 126 Pfam PF04965 Gene 25-like lysozyme 18 83 2.3E-12 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 PANTHER PTHR11699:SF18 549 987 9.9E-170 T 22-04-2016 NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 787 798 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 535 980 2.5E-182 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 Gene3D G3DSA:3.40.605.10 537 774 3.4E-68 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 Gene3D G3DSA:3.20.20.220 171 513 7.9E-99 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 Pfam PF00171 Aldehyde dehydrogenase family 537 984 2.6E-117 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 Gene3D G3DSA:1.10.2060.10 53 169 1.8E-40 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 SUPERFAMILY SSF81935 5 170 1.05E-52 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 Pfam PF01619 Proline dehydrogenase 184 471 2.5E-90 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 SUPERFAMILY SSF53720 539 987 1.19E-127 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 SUPERFAMILY SSF51730 171 515 3.26E-110 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 Gene3D G3DSA:3.40.309.10 775 963 1.7E-47 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 59 168 1.2E-38 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 NHAM_RS17445 7bdf657deeaea5148f13585e37f269a2 1002 PANTHER PTHR11699 549 987 9.9E-170 T 22-04-2016 NHAM_RS16230 1c5eab8497658d88f55f09c3b368039b 464 Pfam PF05193 Peptidase M16 inactive domain 202 387 2.2E-27 T 22-04-2016 IPR007863 Peptidase M16, C-terminal NHAM_RS16230 1c5eab8497658d88f55f09c3b368039b 464 SUPERFAMILY SSF63411 269 448 9.25E-34 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NHAM_RS16230 1c5eab8497658d88f55f09c3b368039b 464 Gene3D G3DSA:3.30.830.10 269 445 1.6E-24 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NHAM_RS16230 1c5eab8497658d88f55f09c3b368039b 464 PANTHER PTHR11851 40 462 3.0E-109 T 22-04-2016 NHAM_RS16230 1c5eab8497658d88f55f09c3b368039b 464 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 69 92 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 NHAM_RS16230 1c5eab8497658d88f55f09c3b368039b 464 Gene3D G3DSA:3.30.830.10 37 253 7.7E-58 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NHAM_RS16230 1c5eab8497658d88f55f09c3b368039b 464 PANTHER PTHR11851:SF69 40 462 3.0E-109 T 22-04-2016 NHAM_RS16230 1c5eab8497658d88f55f09c3b368039b 464 SUPERFAMILY SSF63411 37 253 9.53E-63 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NHAM_RS16230 1c5eab8497658d88f55f09c3b368039b 464 Pfam PF00675 Insulinase (Peptidase family M16) 49 194 3.7E-28 T 22-04-2016 IPR011765 Peptidase M16, N-terminal NHAM_RS01355 7f882fa01e8424a65f3162a95628a746 247 Hamap MF_01393 ATP synthase subunit a [atpB]. 6 246 15.808 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NHAM_RS01355 7f882fa01e8424a65f3162a95628a746 247 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 4 243 1.1E-67 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NHAM_RS01355 7f882fa01e8424a65f3162a95628a746 247 Pfam PF00119 ATP synthase A chain 32 239 1.4E-50 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NHAM_RS01355 7f882fa01e8424a65f3162a95628a746 247 Gene3D G3DSA:1.20.120.220 77 244 8.5E-48 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NHAM_RS01355 7f882fa01e8424a65f3162a95628a746 247 SUPERFAMILY SSF81336 76 240 7.06E-45 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NHAM_RS01355 7f882fa01e8424a65f3162a95628a746 247 PRINTS PR00123 ATP synthase A subunit signature 226 241 2.0E-26 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NHAM_RS01355 7f882fa01e8424a65f3162a95628a746 247 PRINTS PR00123 ATP synthase A subunit signature 85 101 2.0E-26 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NHAM_RS01355 7f882fa01e8424a65f3162a95628a746 247 PRINTS PR00123 ATP synthase A subunit signature 146 161 2.0E-26 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NHAM_RS01355 7f882fa01e8424a65f3162a95628a746 247 PRINTS PR00123 ATP synthase A subunit signature 166 188 2.0E-26 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NHAM_RS01355 7f882fa01e8424a65f3162a95628a746 247 ProSitePatterns PS00449 ATP synthase a subunit signature. 169 178 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site NHAM_RS01355 7f882fa01e8424a65f3162a95628a746 247 PANTHER PTHR11410:SF6 1 247 7.7E-127 T 22-04-2016 NHAM_RS01355 7f882fa01e8424a65f3162a95628a746 247 PANTHER PTHR11410 1 247 7.7E-127 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 NHAM_RS18670 0934ee5e3ce0e26b711f5f6598c69eae 366 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 143 351 4.6E-96 T 22-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 NHAM_RS18670 0934ee5e3ce0e26b711f5f6598c69eae 366 PANTHER PTHR30572 134 359 9.5E-53 T 22-04-2016 NHAM_RS18670 0934ee5e3ce0e26b711f5f6598c69eae 366 Pfam PF01618 MotA/TolQ/ExbB proton channel family 235 332 3.1E-35 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NHAM_RS18670 0934ee5e3ce0e26b711f5f6598c69eae 366 PANTHER PTHR30572:SF11 134 359 9.5E-53 T 22-04-2016 NHAM_RS02435 a4b94e52a2e1fb757d9172a778b98e84 361 SMART SM00937 64 179 4.6E-55 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 NHAM_RS02435 a4b94e52a2e1fb757d9172a778b98e84 361 Gene3D G3DSA:1.20.58.410 29 92 1.0E-6 T 22-04-2016 NHAM_RS02435 a4b94e52a2e1fb757d9172a778b98e84 361 PANTHER PTHR11075:SF9 6 357 7.0E-172 T 22-04-2016 NHAM_RS02435 a4b94e52a2e1fb757d9172a778b98e84 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 358 38.235 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 NHAM_RS02435 a4b94e52a2e1fb757d9172a778b98e84 361 SUPERFAMILY SSF75620 29 354 5.49E-124 T 22-04-2016 NHAM_RS02435 a4b94e52a2e1fb757d9172a778b98e84 361 Pfam PF03462 PCRF domain 14 204 5.4E-64 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 NHAM_RS02435 a4b94e52a2e1fb757d9172a778b98e84 361 Gene3D G3DSA:3.30.160.20 211 285 9.8E-35 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain NHAM_RS02435 a4b94e52a2e1fb757d9172a778b98e84 361 Pfam PF00472 RF-1 domain 212 321 2.1E-42 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NHAM_RS02435 a4b94e52a2e1fb757d9172a778b98e84 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 8 355 1.4E-144 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 NHAM_RS02435 a4b94e52a2e1fb757d9172a778b98e84 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NHAM_RS02435 a4b94e52a2e1fb757d9172a778b98e84 361 PANTHER PTHR11075 6 357 7.0E-172 T 22-04-2016 NHAM_RS18265 f3c28817bfb11d386d37eb032b561d73 329 SUPERFAMILY SSF53850 21 328 2.28E-91 T 22-04-2016 NHAM_RS18265 f3c28817bfb11d386d37eb032b561d73 329 Pfam PF13531 Bacterial extracellular solute-binding protein 42 280 5.3E-46 T 22-04-2016 NHAM_RS18265 f3c28817bfb11d386d37eb032b561d73 329 PANTHER PTHR30368:SF2 17 329 6.2E-187 T 22-04-2016 NHAM_RS18265 f3c28817bfb11d386d37eb032b561d73 329 PANTHER PTHR30368 17 329 6.2E-187 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 NHAM_RS18265 f3c28817bfb11d386d37eb032b561d73 329 Gene3D G3DSA:3.40.190.10 173 295 2.7E-29 T 22-04-2016 NHAM_RS18265 f3c28817bfb11d386d37eb032b561d73 329 Gene3D G3DSA:3.40.190.10 22 169 2.7E-51 T 22-04-2016 NHAM_RS18265 f3c28817bfb11d386d37eb032b561d73 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 17 326 9.3E-153 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 NHAM_RS18265 f3c28817bfb11d386d37eb032b561d73 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 146 154 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 NHAM_RS09325 c433c58ac552877bcef83a368f3275d6 422 SUPERFAMILY SSF53187 190 288 4.71E-48 T 22-04-2016 NHAM_RS09325 c433c58ac552877bcef83a368f3275d6 422 SUPERFAMILY SSF53187 335 411 4.71E-48 T 22-04-2016 NHAM_RS09325 c433c58ac552877bcef83a368f3275d6 422 PANTHER PTHR30404:SF0 40 414 4.2E-95 T 22-04-2016 NHAM_RS09325 c433c58ac552877bcef83a368f3275d6 422 Pfam PF11741 AMIN domain 52 145 2.1E-9 T 22-04-2016 IPR021731 AMIN domain NHAM_RS09325 c433c58ac552877bcef83a368f3275d6 422 PANTHER PTHR30404 40 414 4.2E-95 T 22-04-2016 NHAM_RS09325 c433c58ac552877bcef83a368f3275d6 422 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 192 408 3.8E-46 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NHAM_RS09325 c433c58ac552877bcef83a368f3275d6 422 Gene3D G3DSA:3.40.630.40 190 289 5.8E-53 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NHAM_RS09325 c433c58ac552877bcef83a368f3275d6 422 Gene3D G3DSA:3.40.630.40 336 411 5.8E-53 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NHAM_RS09325 c433c58ac552877bcef83a368f3275d6 422 SMART SM00646 252 408 4.7E-36 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 NHAM_RS13095 d7e16b8a049ff7e943b49169beb8e641 389 Pfam PF00108 Thiolase, N-terminal domain 5 225 5.5E-25 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NHAM_RS13095 d7e16b8a049ff7e943b49169beb8e641 389 Pfam PF02803 Thiolase, C-terminal domain 261 353 4.3E-10 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NHAM_RS13095 d7e16b8a049ff7e943b49169beb8e641 389 PANTHER PTHR18919:SF8 1 389 2.8E-121 T 22-04-2016 NHAM_RS13095 d7e16b8a049ff7e943b49169beb8e641 389 PANTHER PTHR18919 1 389 2.8E-121 T 22-04-2016 NHAM_RS13095 d7e16b8a049ff7e943b49169beb8e641 389 Gene3D G3DSA:3.40.47.10 145 182 1.8E-21 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS13095 d7e16b8a049ff7e943b49169beb8e641 389 Gene3D G3DSA:3.40.47.10 245 384 1.8E-21 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS13095 d7e16b8a049ff7e943b49169beb8e641 389 SUPERFAMILY SSF53901 10 119 1.8E-43 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS13095 d7e16b8a049ff7e943b49169beb8e641 389 SUPERFAMILY SSF53901 186 352 1.8E-43 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS13095 d7e16b8a049ff7e943b49169beb8e641 389 Gene3D G3DSA:3.40.47.10 13 121 3.0E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS13095 d7e16b8a049ff7e943b49169beb8e641 389 Gene3D G3DSA:3.40.47.10 207 227 3.0E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS13095 d7e16b8a049ff7e943b49169beb8e641 389 PIRSF PIRSF000429 1 386 2.4E-69 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 NHAM_RS19010 5d3bd2b31894536b7ae5a1fc02231534 492 Gene3D G3DSA:3.30.565.10 303 476 6.0E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS19010 5d3bd2b31894536b7ae5a1fc02231534 492 PANTHER PTHR24423 192 491 8.0E-128 T 22-04-2016 NHAM_RS19010 5d3bd2b31894536b7ae5a1fc02231534 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 2.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS19010 5d3bd2b31894536b7ae5a1fc02231534 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 2.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS19010 5d3bd2b31894536b7ae5a1fc02231534 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 2.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS19010 5d3bd2b31894536b7ae5a1fc02231534 492 SMART SM00387 366 479 2.2E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS19010 5d3bd2b31894536b7ae5a1fc02231534 492 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 477 1.2E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS19010 5d3bd2b31894536b7ae5a1fc02231534 492 PANTHER PTHR24423:SF534 192 491 8.0E-128 T 22-04-2016 NHAM_RS19010 5d3bd2b31894536b7ae5a1fc02231534 492 SUPERFAMILY SSF55874 321 477 6.16E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 PANTHER PTHR10169:SF48 18 423 0.0 T 22-04-2016 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 SUPERFAMILY SSF56719 41 522 7.98E-180 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 42 506 2.5E-154 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 18 904 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 PANTHER PTHR10169 451 743 0.0 T 22-04-2016 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 PANTHER PTHR10169 18 423 0.0 T 22-04-2016 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 805 853 2.6E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 539 585 2.3E-14 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 696 742 2.0E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 591 638 1.1E-4 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 857 901 6.5E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 692 2.3E-7 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 13 907 28.257 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 SUPERFAMILY SSF101904 534 745 3.66E-90 T 22-04-2016 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 SUPERFAMILY SSF101904 802 908 3.66E-90 T 22-04-2016 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Gene3D G3DSA:1.10.268.10 372 497 3.3E-42 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 SMART SM00434 21 500 1.9E-282 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 PANTHER PTHR10169 801 878 0.0 T 22-04-2016 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Gene3D G3DSA:2.120.10.90 802 903 1.1E-111 T 22-04-2016 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Gene3D G3DSA:2.120.10.90 531 744 1.1E-111 T 22-04-2016 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Gene3D G3DSA:3.90.199.10 44 226 1.7E-84 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 Gene3D G3DSA:3.30.1360.40 246 342 6.1E-39 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 PANTHER PTHR10169:SF48 451 743 0.0 T 22-04-2016 NHAM_RS09015 2a0b417923504a27c4d71ece50306d90 913 PANTHER PTHR10169:SF48 801 878 0.0 T 22-04-2016 NHAM_RS13520 dee6e0eaf041581d5cabb107d026b661 326 SUPERFAMILY SSF52540 6 324 1.16E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13520 dee6e0eaf041581d5cabb107d026b661 326 PANTHER PTHR23408 1 326 1.3E-166 T 22-04-2016 NHAM_RS13520 dee6e0eaf041581d5cabb107d026b661 326 Pfam PF03308 ArgK protein 22 291 1.1E-108 T 22-04-2016 NHAM_RS13520 dee6e0eaf041581d5cabb107d026b661 326 Gene3D G3DSA:1.20.5.170 7 55 9.0E-19 T 22-04-2016 NHAM_RS13520 dee6e0eaf041581d5cabb107d026b661 326 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 17 323 1.4E-106 T 22-04-2016 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 NHAM_RS13520 dee6e0eaf041581d5cabb107d026b661 326 PANTHER PTHR23408:SF17 1 326 1.3E-166 T 22-04-2016 NHAM_RS13520 dee6e0eaf041581d5cabb107d026b661 326 Gene3D G3DSA:3.40.50.300 56 259 1.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03720 3a3cdc60acb9e375c15c7b8e43444e20 257 PANTHER PTHR32347:SF15 5 253 2.1E-111 T 22-04-2016 NHAM_RS03720 3a3cdc60acb9e375c15c7b8e43444e20 257 Pfam PF13437 HlyD family secretion protein 138 226 3.2E-16 T 22-04-2016 NHAM_RS03720 3a3cdc60acb9e375c15c7b8e43444e20 257 SUPERFAMILY SSF111369 39 189 1.7E-24 T 22-04-2016 NHAM_RS03720 3a3cdc60acb9e375c15c7b8e43444e20 257 PANTHER PTHR32347 5 253 2.1E-111 T 22-04-2016 NHAM_RS03720 3a3cdc60acb9e375c15c7b8e43444e20 257 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 213 1.9E-32 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS03720 3a3cdc60acb9e375c15c7b8e43444e20 257 Pfam PF13533 Biotin-lipoyl like 42 87 3.5E-8 T 22-04-2016 NHAM_RS03720 3a3cdc60acb9e375c15c7b8e43444e20 257 Gene3D G3DSA:2.40.50.100 42 72 7.1E-13 T 22-04-2016 NHAM_RS03720 3a3cdc60acb9e375c15c7b8e43444e20 257 Gene3D G3DSA:2.40.50.100 133 166 7.1E-13 T 22-04-2016 NHAM_RS07320 de14f721f69cf55d3ea84bd06134e240 223 Gene3D G3DSA:1.10.10.10 123 219 2.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS07320 de14f721f69cf55d3ea84bd06134e240 223 PANTHER PTHR26402 1 219 5.3E-102 T 22-04-2016 NHAM_RS07320 de14f721f69cf55d3ea84bd06134e240 223 SUPERFAMILY SSF46894 118 217 5.39E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS07320 de14f721f69cf55d3ea84bd06134e240 223 SMART SM00862 145 216 1.8E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS07320 de14f721f69cf55d3ea84bd06134e240 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 5.0E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS07320 de14f721f69cf55d3ea84bd06134e240 223 SUPERFAMILY SSF52172 2 129 6.97E-39 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS07320 de14f721f69cf55d3ea84bd06134e240 223 Gene3D G3DSA:3.40.50.2300 2 122 1.6E-37 T 22-04-2016 NHAM_RS07320 de14f721f69cf55d3ea84bd06134e240 223 Pfam PF00072 Response regulator receiver domain 4 113 1.3E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS07320 de14f721f69cf55d3ea84bd06134e240 223 PANTHER PTHR26402:SF316 1 219 5.3E-102 T 22-04-2016 NHAM_RS07320 de14f721f69cf55d3ea84bd06134e240 223 SMART SM00448 1 112 1.8E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS01500 6540a55b95c13a3b997c2509c1491ff3 90 SUPERFAMILY SSF46955 15 68 4.94E-5 T 22-04-2016 IPR009061 Putative DNA-binding domain NHAM_RS01500 6540a55b95c13a3b997c2509c1491ff3 90 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 14 63 1.2E-10 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 PANTHER PTHR35333 39 297 1.9E-95 T 22-04-2016 NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 PRINTS PR00118 Beta-lactamase class A signature 229 244 1.3E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 PRINTS PR00118 Beta-lactamase class A signature 212 227 1.3E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 PRINTS PR00118 Beta-lactamase class A signature 176 201 1.3E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 PRINTS PR00118 Beta-lactamase class A signature 71 88 1.3E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 PRINTS PR00118 Beta-lactamase class A signature 150 174 1.3E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 PRINTS PR00118 Beta-lactamase class A signature 40 64 1.3E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 PRINTS PR00118 Beta-lactamase class A signature 114 139 1.3E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 Pfam PF13354 Beta-lactamase enzyme family 60 268 1.5E-45 T 22-04-2016 NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 Gene3D G3DSA:3.40.710.10 39 296 2.8E-108 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 PANTHER PTHR35333:SF2 39 297 1.9E-95 T 22-04-2016 NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 ProSitePatterns PS00146 Beta-lactamase class-A active site. 73 88 - T 22-04-2016 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 NHAM_RS02320 b4ed99ed10775f48656357355e1bed3b 297 SUPERFAMILY SSF56601 39 293 2.82E-79 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS09595 ab2154011568fa567c348b15632b940c 572 PANTHER PTHR11814 18 557 3.9E-115 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 NHAM_RS09595 ab2154011568fa567c348b15632b940c 572 Gene3D G3DSA:3.30.750.24 445 555 4.3E-12 T 22-04-2016 IPR002645 STAS domain NHAM_RS09595 ab2154011568fa567c348b15632b940c 572 PANTHER PTHR11814:SF55 18 557 3.9E-115 T 22-04-2016 NHAM_RS09595 ab2154011568fa567c348b15632b940c 572 Pfam PF00916 Sulfate permease family 23 388 1.3E-61 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 NHAM_RS09595 ab2154011568fa567c348b15632b940c 572 Pfam PF01740 STAS domain 444 551 5.3E-13 T 22-04-2016 IPR002645 STAS domain NHAM_RS09595 ab2154011568fa567c348b15632b940c 572 SUPERFAMILY SSF52091 446 555 7.06E-11 T 22-04-2016 IPR002645 STAS domain NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PANTHER PTHR30009 1 417 1.9E-282 T 22-04-2016 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PANTHER PTHR30009 472 658 1.9E-282 T 22-04-2016 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PANTHER PTHR30009:SF0 1 417 1.9E-282 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PANTHER PTHR30009:SF0 472 658 1.9E-282 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.8E-66 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 633 646 2.8E-66 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 2.8E-66 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 2.8E-66 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 2.8E-66 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 2.8E-66 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.8E-66 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 643 6.0E-186 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.4E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 3.4E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 3.4E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 3.4E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 3.4E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 3.4E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 3.4E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 3.4E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 640 1.2E-113 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal NHAM_RS07350 60eb09d129b05956ded6e09263513fc0 660 Pfam PF01578 Cytochrome C assembly protein 89 295 3.9E-52 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 NHAM_RS15550 f3a1879c39ccb296110dfbb96cc03af6 336 Gene3D G3DSA:3.90.550.10 20 284 7.5E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS15550 f3a1879c39ccb296110dfbb96cc03af6 336 Pfam PF00535 Glycosyl transferase family 2 23 151 3.8E-23 T 22-04-2016 IPR001173 Glycosyltransferase 2-like NHAM_RS15550 f3a1879c39ccb296110dfbb96cc03af6 336 PANTHER PTHR22916 185 329 1.9E-48 T 22-04-2016 NHAM_RS15550 f3a1879c39ccb296110dfbb96cc03af6 336 PANTHER PTHR22916 19 158 1.9E-48 T 22-04-2016 NHAM_RS15550 f3a1879c39ccb296110dfbb96cc03af6 336 SUPERFAMILY SSF53448 19 284 4.1E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS15550 f3a1879c39ccb296110dfbb96cc03af6 336 PANTHER PTHR22916:SF9 185 329 1.9E-48 T 22-04-2016 NHAM_RS15550 f3a1879c39ccb296110dfbb96cc03af6 336 PANTHER PTHR22916:SF9 19 158 1.9E-48 T 22-04-2016 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 SMART SM00863 194 244 5.4E-25 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 97 667 3.0E-198 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 Gene3D G3DSA:3.10.20.30 27 89 1.2E-19 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 SUPERFAMILY SSF81271 28 85 4.9E-13 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 Gene3D G3DSA:3.30.980.10 92 154 1.5E-40 T 22-04-2016 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 Gene3D G3DSA:3.30.980.10 212 249 1.5E-40 T 22-04-2016 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 PRINTS PR01047 Threonyl-tRNA synthetase signature 501 529 5.0E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 PRINTS PR01047 Threonyl-tRNA synthetase signature 544 557 5.0E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 PRINTS PR01047 Threonyl-tRNA synthetase signature 359 387 5.0E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 PRINTS PR01047 Threonyl-tRNA synthetase signature 571 583 5.0E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 PRINTS PR01047 Threonyl-tRNA synthetase signature 392 415 5.0E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 Gene3D G3DSA:3.30.54.20 155 211 6.3E-21 T 22-04-2016 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 SUPERFAMILY SSF52954 567 668 7.7E-28 T 22-04-2016 IPR004154 Anticodon-binding NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 195 244 1.7E-13 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 PANTHER PTHR11451:SF31 11 668 0.0 T 22-04-2016 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 PANTHER PTHR11451 11 668 0.0 T 22-04-2016 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 Pfam PF02824 TGS domain 31 85 1.6E-6 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 SUPERFAMILY SSF55186 88 266 2.88E-61 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 Gene3D G3DSA:3.30.930.10 267 567 7.7E-109 T 22-04-2016 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 Gene3D G3DSA:3.40.50.800 568 668 6.1E-29 T 22-04-2016 IPR004154 Anticodon-binding NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 352 565 8.8E-38 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 SUPERFAMILY SSF55681 268 563 2.29E-82 T 22-04-2016 NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 Pfam PF03129 Anticodon binding domain 578 667 4.7E-17 T 22-04-2016 IPR004154 Anticodon-binding NHAM_RS08525 ddd33c130b177e1a26f2e5008f10fd6c 681 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 91 671 32.226 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NHAM_RS03655 b561306f48001eb391e7c05e67da8e78 205 Pfam PF08857 Putative ParB-like nuclease 11 167 5.5E-52 T 22-04-2016 IPR014956 Putative ParB-like nuclease NHAM_RS03655 b561306f48001eb391e7c05e67da8e78 205 Gene3D G3DSA:1.10.8.10 135 194 2.8E-18 T 22-04-2016 NHAM_RS03655 b561306f48001eb391e7c05e67da8e78 205 Gene3D G3DSA:3.90.1530.10 8 134 5.9E-41 T 22-04-2016 NHAM_RS03655 b561306f48001eb391e7c05e67da8e78 205 PIRSF PIRSF029669 1 205 2.4E-80 T 22-04-2016 IPR016932 Uncharacterised conserved protein UCP029669 NHAM_RS03655 b561306f48001eb391e7c05e67da8e78 205 SUPERFAMILY SSF110849 8 203 1.67E-68 T 22-04-2016 IPR003115 ParB/Sulfiredoxin NHAM_RS00320 7e30099cde2f4ff5577038056b7e3bcd 115 Gene3D G3DSA:1.20.5.110 49 72 3.1E-4 T 22-04-2016 NHAM_RS00320 7e30099cde2f4ff5577038056b7e3bcd 115 Pfam PF06305 Protein of unknown function (DUF1049) 29 91 3.8E-6 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 NHAM_RS05135 5f5f7cdd4ab348d0bd3a07a4f1998936 92 PIRSF PIRSF028784 1 92 2.8E-24 T 22-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 NHAM_RS05135 5f5f7cdd4ab348d0bd3a07a4f1998936 92 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 85 2.2E-21 T 22-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 NHAM_RS05135 5f5f7cdd4ab348d0bd3a07a4f1998936 92 PANTHER PTHR34702 1 92 2.1E-16 T 22-04-2016 NHAM_RS05135 5f5f7cdd4ab348d0bd3a07a4f1998936 92 PANTHER PTHR34702:SF1 1 92 2.1E-16 T 22-04-2016 NHAM_RS10810 0e5bbf138451ecf589043c920c1f5779 102 Gene3D G3DSA:3.30.160.190 1 79 2.8E-36 T 22-04-2016 NHAM_RS10810 0e5bbf138451ecf589043c920c1f5779 102 PANTHER PTHR12219 1 92 4.9E-45 T 22-04-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 NHAM_RS10810 0e5bbf138451ecf589043c920c1f5779 102 Pfam PF04800 ETC complex I subunit conserved region 2 97 1.9E-37 T 22-04-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 NHAM_RS10810 0e5bbf138451ecf589043c920c1f5779 102 PANTHER PTHR12219:SF18 1 92 4.9E-45 T 22-04-2016 NHAM_RS03235 bdb29f32fc35535499b02f374db6814f 308 SUPERFAMILY SSF48576 39 302 2.88E-75 T 22-04-2016 IPR008949 Isoprenoid synthase domain NHAM_RS03235 bdb29f32fc35535499b02f374db6814f 308 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 93 109 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NHAM_RS03235 bdb29f32fc35535499b02f374db6814f 308 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 227 239 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NHAM_RS03235 bdb29f32fc35535499b02f374db6814f 308 PANTHER PTHR12001:SF23 6 289 4.8E-92 T 22-04-2016 NHAM_RS03235 bdb29f32fc35535499b02f374db6814f 308 PANTHER PTHR12001 6 289 4.8E-92 T 22-04-2016 IPR017446 Polyprenyl synthetase-related NHAM_RS03235 bdb29f32fc35535499b02f374db6814f 308 Pfam PF00348 Polyprenyl synthetase 42 280 1.1E-50 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 NHAM_RS03235 bdb29f32fc35535499b02f374db6814f 308 Gene3D G3DSA:1.10.600.10 9 306 1.3E-83 T 22-04-2016 IPR008949 Isoprenoid synthase domain NHAM_RS02990 81bf947ec9ece622192e1ffb6bd05478 304 PIRSF PIRSF037112 1 304 5.7E-115 T 22-04-2016 IPR017113 Antirestriction, ArdC NHAM_RS02990 81bf947ec9ece622192e1ffb6bd05478 304 Pfam PF08401 Domain of unknown function (DUF1738) 7 127 2.2E-40 T 22-04-2016 IPR013610 Domain of unknown function DUF1738 NHAM_RS01160 bf8f3b8791d4e3b1e9ea2463d7e5f18e 444 SUPERFAMILY SSF53474 118 428 3.46E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS01160 bf8f3b8791d4e3b1e9ea2463d7e5f18e 444 Pfam PF06850 PHB de-polymerase C-terminus 229 430 1.1E-103 T 22-04-2016 IPR009656 PHB de-polymerase, C-terminal NHAM_RS01160 bf8f3b8791d4e3b1e9ea2463d7e5f18e 444 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 24 429 1.0E-192 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase NHAM_RS01160 bf8f3b8791d4e3b1e9ea2463d7e5f18e 444 PIRSF PIRSF020818 19 442 8.3E-206 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase NHAM_RS01160 bf8f3b8791d4e3b1e9ea2463d7e5f18e 444 Gene3D G3DSA:3.40.50.1820 118 430 5.2E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS09955 877ac101c5efe32e33fc810a429d415c 268 Gene3D G3DSA:1.10.530.10 64 186 1.1E-5 T 22-04-2016 NHAM_RS09955 877ac101c5efe32e33fc810a429d415c 268 Pfam PF01464 Transglycosylase SLT domain 90 192 5.7E-5 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 NHAM_RS09955 877ac101c5efe32e33fc810a429d415c 268 SUPERFAMILY SSF53955 60 188 1.49E-9 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS18190 a7ef293a23f045858028f883400a1262 75 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 70 9.6E-34 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18190 a7ef293a23f045858028f883400a1262 75 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 60 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18190 a7ef293a23f045858028f883400a1262 75 Pfam PF01197 Ribosomal protein L31 1 68 2.4E-26 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18190 a7ef293a23f045858028f883400a1262 75 SUPERFAMILY SSF143800 1 71 4.71E-23 T 22-04-2016 NHAM_RS18190 a7ef293a23f045858028f883400a1262 75 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 72 26.738 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18190 a7ef293a23f045858028f883400a1262 75 PANTHER PTHR33280 1 74 2.6E-30 T 22-04-2016 NHAM_RS18190 a7ef293a23f045858028f883400a1262 75 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.9E-9 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18190 a7ef293a23f045858028f883400a1262 75 PRINTS PR01249 Ribosomal protein L31 signature 50 68 3.9E-9 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02620 e6dce4ddaeb82c24972432efc56840cd 112 PANTHER PTHR11938:SF101 1 80 3.9E-35 T 22-04-2016 NHAM_RS02620 e6dce4ddaeb82c24972432efc56840cd 112 Pfam PF00037 4Fe-4S binding domain 34 56 3.4E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NHAM_RS02620 e6dce4ddaeb82c24972432efc56840cd 112 Gene3D G3DSA:3.30.70.20 3 97 4.6E-21 T 22-04-2016 NHAM_RS02620 e6dce4ddaeb82c24972432efc56840cd 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.4E-19 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 NHAM_RS02620 e6dce4ddaeb82c24972432efc56840cd 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.4E-19 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 NHAM_RS02620 e6dce4ddaeb82c24972432efc56840cd 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.4E-19 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 NHAM_RS02620 e6dce4ddaeb82c24972432efc56840cd 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NHAM_RS02620 e6dce4ddaeb82c24972432efc56840cd 112 PANTHER PTHR11938 1 80 3.9E-35 T 22-04-2016 NHAM_RS02620 e6dce4ddaeb82c24972432efc56840cd 112 Pfam PF11953 Domain of unknown function (DUF3470) 64 105 1.2E-19 T 22-04-2016 IPR022569 Ferredoxin, C-terminal NHAM_RS02620 e6dce4ddaeb82c24972432efc56840cd 112 SUPERFAMILY SSF54862 3 103 1.97E-23 T 22-04-2016 NHAM_RS08270 a69354d8ba6a4088f7be3c5c9711e829 958 SUPERFAMILY SSF53383 926 949 7.56E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS08270 a69354d8ba6a4088f7be3c5c9711e829 958 SUPERFAMILY SSF53383 472 883 7.56E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS08270 a69354d8ba6a4088f7be3c5c9711e829 958 Gene3D G3DSA:3.40.640.10 499 739 2.5E-42 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS08270 a69354d8ba6a4088f7be3c5c9711e829 958 Gene3D G3DSA:3.40.640.10 94 312 5.2E-11 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS08270 a69354d8ba6a4088f7be3c5c9711e829 958 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 5 953 25.617 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 NHAM_RS08270 a69354d8ba6a4088f7be3c5c9711e829 958 PANTHER PTHR11773 6 953 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 NHAM_RS08270 a69354d8ba6a4088f7be3c5c9711e829 958 Pfam PF02347 Glycine cleavage system P-protein 13 441 1.5E-171 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 NHAM_RS08270 a69354d8ba6a4088f7be3c5c9711e829 958 Pfam PF02347 Glycine cleavage system P-protein 454 731 8.4E-11 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 NHAM_RS08270 a69354d8ba6a4088f7be3c5c9711e829 958 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 14 947 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 NHAM_RS08270 a69354d8ba6a4088f7be3c5c9711e829 958 SUPERFAMILY SSF53383 14 442 1.42E-96 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS08270 a69354d8ba6a4088f7be3c5c9711e829 958 PANTHER PTHR11773:SF1 6 953 0.0 T 22-04-2016 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 Pfam PF13365 Trypsin-like peptidase domain 49 185 2.5E-31 T 22-04-2016 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 PANTHER PTHR22939 5 318 9.4E-88 T 22-04-2016 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 PRINTS PR00834 HtrA/DegQ protease family signature 178 195 5.1E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 PRINTS PR00834 HtrA/DegQ protease family signature 263 275 5.1E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 PRINTS PR00834 HtrA/DegQ protease family signature 119 143 5.1E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 PRINTS PR00834 HtrA/DegQ protease family signature 156 173 5.1E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 PRINTS PR00834 HtrA/DegQ protease family signature 79 99 5.1E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 PRINTS PR00834 HtrA/DegQ protease family signature 58 70 5.1E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 PANTHER PTHR22939:SF77 5 318 9.4E-88 T 22-04-2016 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 Pfam PF13180 PDZ domain 239 301 1.2E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 Gene3D G3DSA:2.40.10.10 17 112 3.7E-24 T 22-04-2016 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 SUPERFAMILY SSF50156 193 315 1.97E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 Gene3D G3DSA:2.40.10.10 113 223 2.2E-38 T 22-04-2016 NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 SUPERFAMILY SSF50494 20 227 2.71E-53 T 22-04-2016 IPR009003 Peptidase S1, PA clan NHAM_RS05260 f0528c33ccf7b406d5e9d4aeff654ace 318 Gene3D G3DSA:2.30.42.10 224 317 7.7E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS15155 0bd01c715735bb0e1aefbe7d68395c70 270 Pfam PF00696 Amino acid kinase family 39 237 4.6E-20 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS15155 0bd01c715735bb0e1aefbe7d68395c70 270 Gene3D G3DSA:3.40.1160.10 38 268 1.8E-26 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS15155 0bd01c715735bb0e1aefbe7d68395c70 270 PIRSF PIRSF039097 1 270 2.0E-116 T 22-04-2016 IPR030669 Molybdenum storage protein subunit alpha/beta GO:0005737|GO:0030151 NHAM_RS15155 0bd01c715735bb0e1aefbe7d68395c70 270 SUPERFAMILY SSF53633 39 268 4.32E-30 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS14975 5e76c605db9db7d3ba83f425ebd9b40f 197 SUPERFAMILY SSF55729 4 177 4.63E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS14975 5e76c605db9db7d3ba83f425ebd9b40f 197 Gene3D G3DSA:3.40.630.30 1 192 4.0E-57 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS14975 5e76c605db9db7d3ba83f425ebd9b40f 197 Pfam PF13302 Acetyltransferase (GNAT) domain 15 151 3.2E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS14975 5e76c605db9db7d3ba83f425ebd9b40f 197 PANTHER PTHR13256:SF20 1 197 7.9E-91 T 22-04-2016 NHAM_RS14975 5e76c605db9db7d3ba83f425ebd9b40f 197 PANTHER PTHR13256 1 197 7.9E-91 T 22-04-2016 NHAM_RS13070 2422d9dcda8ffe1463dc1bce5b1eeac4 577 SUPERFAMILY SSF56801 15 547 2.88E-122 T 22-04-2016 NHAM_RS13070 2422d9dcda8ffe1463dc1bce5b1eeac4 577 PANTHER PTHR24095 16 552 1.9E-193 T 22-04-2016 NHAM_RS13070 2422d9dcda8ffe1463dc1bce5b1eeac4 577 Gene3D G3DSA:2.30.38.10 367 442 2.1E-10 T 22-04-2016 NHAM_RS13070 2422d9dcda8ffe1463dc1bce5b1eeac4 577 Pfam PF13193 AMP-binding enzyme C-terminal domain 457 535 3.0E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NHAM_RS13070 2422d9dcda8ffe1463dc1bce5b1eeac4 577 Gene3D G3DSA:3.40.50.980 64 208 1.2E-25 T 22-04-2016 NHAM_RS13070 2422d9dcda8ffe1463dc1bce5b1eeac4 577 Pfam PF00501 AMP-binding enzyme 60 448 1.2E-65 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NHAM_RS13070 2422d9dcda8ffe1463dc1bce5b1eeac4 577 Gene3D G3DSA:3.30.300.30 446 548 6.9E-22 T 22-04-2016 NHAM_RS13070 2422d9dcda8ffe1463dc1bce5b1eeac4 577 PANTHER PTHR24095:SF180 16 552 1.9E-193 T 22-04-2016 NHAM_RS13070 2422d9dcda8ffe1463dc1bce5b1eeac4 577 Gene3D G3DSA:3.40.50.980 209 365 1.5E-27 T 22-04-2016 NHAM_RS18105 737ac41630693d104785377b92f9022d 195 Gene3D G3DSA:3.40.50.10420 9 190 1.6E-49 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain NHAM_RS18105 737ac41630693d104785377b92f9022d 195 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 10 186 4.5E-48 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase NHAM_RS18105 737ac41630693d104785377b92f9022d 195 PIRSF PIRSF006806 7 189 7.3E-37 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase NHAM_RS18105 737ac41630693d104785377b92f9022d 195 PANTHER PTHR23407 1 187 4.4E-48 T 22-04-2016 NHAM_RS18105 737ac41630693d104785377b92f9022d 195 SUPERFAMILY SSF100950 9 192 8.79E-46 T 22-04-2016 NHAM_RS18105 737ac41630693d104785377b92f9022d 195 PANTHER PTHR23407:SF1 1 187 4.4E-48 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase NHAM_RS18105 737ac41630693d104785377b92f9022d 195 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 10 186 1.5E-37 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase NHAM_RS01495 f93026ddad5cdb28fd52fb151da65b27 399 Pfam PF00589 Phage integrase family 227 371 8.8E-20 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS01495 f93026ddad5cdb28fd52fb151da65b27 399 Gene3D G3DSA:1.10.150.130 97 196 6.9E-19 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS01495 f93026ddad5cdb28fd52fb151da65b27 399 Gene3D G3DSA:1.10.443.10 210 376 1.6E-23 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS01495 f93026ddad5cdb28fd52fb151da65b27 399 Pfam PF13356 Domain of unknown function (DUF4102) 2 86 3.7E-19 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 NHAM_RS01495 f93026ddad5cdb28fd52fb151da65b27 399 PANTHER PTHR30629:SF3 2 390 4.6E-102 T 22-04-2016 NHAM_RS01495 f93026ddad5cdb28fd52fb151da65b27 399 SUPERFAMILY SSF56349 97 381 1.82E-56 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS01495 f93026ddad5cdb28fd52fb151da65b27 399 PANTHER PTHR30629 2 390 4.6E-102 T 22-04-2016 NHAM_RS04385 5a8bb7b1ba2449a026d9ee43f99593c3 517 PANTHER PTHR21248:SF12 35 503 3.6E-125 T 22-04-2016 NHAM_RS04385 5a8bb7b1ba2449a026d9ee43f99593c3 517 Pfam PF13091 PLD-like domain 322 459 2.4E-20 T 22-04-2016 IPR025202 Phospholipase D-like domain NHAM_RS04385 5a8bb7b1ba2449a026d9ee43f99593c3 517 Pfam PF13091 PLD-like domain 84 232 2.4E-18 T 22-04-2016 IPR025202 Phospholipase D-like domain NHAM_RS04385 5a8bb7b1ba2449a026d9ee43f99593c3 517 SUPERFAMILY SSF56024 290 467 5.3E-31 T 22-04-2016 NHAM_RS04385 5a8bb7b1ba2449a026d9ee43f99593c3 517 Gene3D G3DSA:3.30.870.10 291 501 7.9E-35 T 22-04-2016 NHAM_RS04385 5a8bb7b1ba2449a026d9ee43f99593c3 517 Gene3D G3DSA:3.30.870.10 71 246 1.7E-40 T 22-04-2016 NHAM_RS04385 5a8bb7b1ba2449a026d9ee43f99593c3 517 SUPERFAMILY SSF56024 60 246 6.59E-42 T 22-04-2016 NHAM_RS04385 5a8bb7b1ba2449a026d9ee43f99593c3 517 PANTHER PTHR21248 35 503 3.6E-125 T 22-04-2016 NHAM_RS04385 5a8bb7b1ba2449a026d9ee43f99593c3 517 SMART SM00155 173 200 3.1E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 NHAM_RS04385 5a8bb7b1ba2449a026d9ee43f99593c3 517 SMART SM00155 408 435 0.0011 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 NHAM_RS03315 9ace188fa0bdc1a8ef8cc83a505de3b1 238 Pfam PF01895 PhoU domain 22 109 4.1E-20 T 22-04-2016 IPR026022 PhoU domain NHAM_RS03315 9ace188fa0bdc1a8ef8cc83a505de3b1 238 Pfam PF01895 PhoU domain 125 209 6.3E-17 T 22-04-2016 IPR026022 PhoU domain NHAM_RS03315 9ace188fa0bdc1a8ef8cc83a505de3b1 238 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 219 8.4E-68 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 NHAM_RS03315 9ace188fa0bdc1a8ef8cc83a505de3b1 238 SUPERFAMILY SSF109755 8 227 3.98E-68 T 22-04-2016 NHAM_RS03315 9ace188fa0bdc1a8ef8cc83a505de3b1 238 Gene3D G3DSA:1.20.58.220 120 220 1.2E-32 T 22-04-2016 NHAM_RS03315 9ace188fa0bdc1a8ef8cc83a505de3b1 238 Gene3D G3DSA:1.20.58.220 5 112 8.2E-29 T 22-04-2016 NHAM_RS03315 9ace188fa0bdc1a8ef8cc83a505de3b1 238 PANTHER PTHR10010 1 219 1.5E-70 T 22-04-2016 NHAM_RS03315 9ace188fa0bdc1a8ef8cc83a505de3b1 238 PANTHER PTHR10010:SF14 1 219 1.5E-70 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 NHAM_RS03315 9ace188fa0bdc1a8ef8cc83a505de3b1 238 PIRSF PIRSF003107 3 223 1.8E-62 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 NHAM_RS06270 58f9931eae4dadb3c11f02f73af69267 105 PANTHER PTHR10160 11 102 1.3E-31 T 22-04-2016 NHAM_RS06270 58f9931eae4dadb3c11f02f73af69267 105 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 15 102 1.2E-35 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 NHAM_RS17830 4e4177efdcb338210b67e00a0165c7c7 186 SUPERFAMILY SSF46626 77 180 3.87E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS17830 4e4177efdcb338210b67e00a0165c7c7 186 Pfam PF00034 Cytochrome c 80 177 1.4E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS17830 4e4177efdcb338210b67e00a0165c7c7 186 PANTHER PTHR11961:SF6 78 185 9.7E-26 T 22-04-2016 NHAM_RS17830 4e4177efdcb338210b67e00a0165c7c7 186 Gene3D G3DSA:1.10.760.10 77 180 2.1E-35 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS17830 4e4177efdcb338210b67e00a0165c7c7 186 PANTHER PTHR11961 78 185 9.7E-26 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS17830 4e4177efdcb338210b67e00a0165c7c7 186 PRINTS PR00604 Class IA and IB cytochrome C signature 102 117 1.0E-12 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS17830 4e4177efdcb338210b67e00a0165c7c7 186 PRINTS PR00604 Class IA and IB cytochrome C signature 168 176 1.0E-12 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS17830 4e4177efdcb338210b67e00a0165c7c7 186 PRINTS PR00604 Class IA and IB cytochrome C signature 151 161 1.0E-12 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS17830 4e4177efdcb338210b67e00a0165c7c7 186 PRINTS PR00604 Class IA and IB cytochrome C signature 118 128 1.0E-12 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS17830 4e4177efdcb338210b67e00a0165c7c7 186 PRINTS PR00604 Class IA and IB cytochrome C signature 132 148 1.0E-12 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS17830 4e4177efdcb338210b67e00a0165c7c7 186 PRINTS PR00604 Class IA and IB cytochrome C signature 89 96 1.0E-12 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS00120 c19cee7cc6fa2f696e5e35dc15c0e91d 539 Pfam PF00795 Carbon-nitrogen hydrolase 261 500 4.2E-24 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NHAM_RS00120 c19cee7cc6fa2f696e5e35dc15c0e91d 539 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 78 483 7.9E-93 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 NHAM_RS00120 c19cee7cc6fa2f696e5e35dc15c0e91d 539 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 19 520 21.878 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 NHAM_RS00120 c19cee7cc6fa2f696e5e35dc15c0e91d 539 PANTHER PTHR38686 11 539 3.3E-67 T 22-04-2016 NHAM_RS00120 c19cee7cc6fa2f696e5e35dc15c0e91d 539 Gene3D G3DSA:3.60.110.10 236 501 7.2E-29 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NHAM_RS00120 c19cee7cc6fa2f696e5e35dc15c0e91d 539 SUPERFAMILY SSF56317 239 513 5.36E-43 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SUPERFAMILY SSF48452 881 1048 3.79E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SUPERFAMILY SSF48452 600 725 3.21E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SUPERFAMILY SSF48452 907 961 3.21E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SUPERFAMILY SSF48452 840 872 3.21E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 Pfam PF13181 Tetratricopeptide repeat 982 1010 0.11 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 PANTHER PTHR23083 595 676 2.3E-25 T 22-04-2016 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 PANTHER PTHR23083 543 576 2.3E-25 T 22-04-2016 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 PANTHER PTHR23083 209 217 2.3E-25 T 22-04-2016 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 PANTHER PTHR23083 692 1016 2.3E-25 T 22-04-2016 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 Gene3D G3DSA:1.25.40.10 842 1054 5.6E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SMART SM00028 788 821 35.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SMART SM00028 692 725 11.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SMART SM00028 836 869 48.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SMART SM00028 643 676 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SMART SM00028 1028 1061 68.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SMART SM00028 740 773 21.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SMART SM00028 884 917 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SMART SM00028 595 628 55.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SMART SM00028 547 580 67.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SMART SM00028 980 1013 7.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SMART SM00028 932 965 2.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SUPERFAMILY SSF52540 25 93 2.19E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SUPERFAMILY SSF52540 125 270 2.19E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 SUPERFAMILY SSF48452 741 904 5.58E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 Gene3D G3DSA:3.40.50.300 17 192 4.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05465 a7f610cb8fd27096d679d12467cd02b3 1087 Gene3D G3DSA:1.25.40.10 526 834 4.5E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 PIRSF PIRSF006485 1 454 9.2E-162 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 SUPERFAMILY SSF52540 3 169 4.08E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 SUPERFAMILY SSF52540 138 452 3.54E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 Gene3D G3DSA:3.40.50.300 185 371 1.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 Gene3D G3DSA:3.40.50.300 2 176 1.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 366 446 2.2E-30 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 446 3.6E-167 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 Gene3D G3DSA:3.30.300.20 372 448 8.1E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 Hamap MF_00195 GTPase Der [der]. 2 449 37.36 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 PANTHER PTHR11649:SF68 1 447 3.1E-264 T 22-04-2016 NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 Pfam PF01926 50S ribosome-binding GTPase 5 120 7.2E-27 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 Pfam PF01926 50S ribosome-binding GTPase 190 308 9.9E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 PANTHER PTHR11649 1 447 3.1E-264 T 22-04-2016 NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 188 355 1.4E-27 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 159 7.3E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.9E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS08610 eb95fbf723e30b12cbbe9bdd7a10d56b 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 54 69 3.9E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS14205 076ad1c74df5458b994f8bc4a6c55471 385 PANTHER PTHR33055:SF3 73 375 6.7E-24 T 22-04-2016 NHAM_RS14205 076ad1c74df5458b994f8bc4a6c55471 385 Pfam PF02371 Transposase IS116/IS110/IS902 family 256 331 1.4E-11 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS14205 076ad1c74df5458b994f8bc4a6c55471 385 PANTHER PTHR33055 73 375 6.7E-24 T 22-04-2016 NHAM_RS14205 076ad1c74df5458b994f8bc4a6c55471 385 Pfam PF01548 Transposase 75 182 1.7E-9 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS01735 902b56790026a7692a4b0716b06bab0a 137 Pfam PF05119 Phage terminase, small subunit 32 127 3.2E-23 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family NHAM_RS01735 902b56790026a7692a4b0716b06bab0a 137 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 23 133 7.1E-23 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family NHAM_RS03840 11d4853a6aa70a20bbce951b81f8c184 569 Pfam PF00437 Type II/IV secretion system protein 194 456 7.3E-75 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 NHAM_RS03840 11d4853a6aa70a20bbce951b81f8c184 569 Gene3D G3DSA:3.40.50.300 297 566 5.2E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03840 11d4853a6aa70a20bbce951b81f8c184 569 SMART SM00382 317 438 2.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS03840 11d4853a6aa70a20bbce951b81f8c184 569 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 384 398 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 NHAM_RS03840 11d4853a6aa70a20bbce951b81f8c184 569 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 55 149 1.8E-11 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 NHAM_RS03840 11d4853a6aa70a20bbce951b81f8c184 569 SUPERFAMILY SSF52540 174 566 1.04E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03840 11d4853a6aa70a20bbce951b81f8c184 569 PANTHER PTHR30258 84 566 2.8E-170 T 22-04-2016 NHAM_RS03840 11d4853a6aa70a20bbce951b81f8c184 569 Gene3D G3DSA:3.30.450.90 168 288 2.2E-44 T 22-04-2016 NHAM_RS03840 11d4853a6aa70a20bbce951b81f8c184 569 SUPERFAMILY SSF160246 7 148 2.09E-16 T 22-04-2016 NHAM_RS03840 11d4853a6aa70a20bbce951b81f8c184 569 PANTHER PTHR30258:SF2 84 566 2.8E-170 T 22-04-2016 NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 PANTHER PTHR24567:SF28 31 223 6.3E-77 T 22-04-2016 NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 PANTHER PTHR24567 31 223 6.3E-77 T 22-04-2016 NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 SUPERFAMILY SSF46785 149 222 2.52E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 SMART SM00100 10 129 1.3E-6 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 Pfam PF13545 Crp-like helix-turn-helix domain 150 223 5.3E-18 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 ProSitePatterns PS00042 Crp-type HTH domain signature. 173 196 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 SUPERFAMILY SSF51206 33 145 3.4E-21 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 Gene3D G3DSA:2.60.120.10 34 140 3.2E-15 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 171 187 3.7E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 187 202 3.7E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 Pfam PF00027 Cyclic nucleotide-binding domain 35 115 9.8E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 Gene3D G3DSA:1.10.10.10 150 223 1.5E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04500 9b1e9b1b0e3d585d5468e7664ab9623d 227 SMART SM00419 165 216 7.7E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS16525 9f89fad2d4f6745558581f3fd904f887 376 Gene3D G3DSA:3.40.50.150 16 268 1.1E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS16525 9f89fad2d4f6745558581f3fd904f887 376 Pfam PF01555 DNA methylase 42 264 3.6E-53 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 NHAM_RS16525 9f89fad2d4f6745558581f3fd904f887 376 SUPERFAMILY SSF53335 19 269 2.27E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS16525 9f89fad2d4f6745558581f3fd904f887 376 PANTHER PTHR13370:SF8 3 286 2.2E-72 T 22-04-2016 NHAM_RS16525 9f89fad2d4f6745558581f3fd904f887 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 44 50 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NHAM_RS16525 9f89fad2d4f6745558581f3fd904f887 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 89 109 2.4E-34 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NHAM_RS16525 9f89fad2d4f6745558581f3fd904f887 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 247 267 2.4E-34 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NHAM_RS16525 9f89fad2d4f6745558581f3fd904f887 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 224 242 2.4E-34 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NHAM_RS16525 9f89fad2d4f6745558581f3fd904f887 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 205 222 2.4E-34 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NHAM_RS16525 9f89fad2d4f6745558581f3fd904f887 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 40 54 2.4E-34 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NHAM_RS16525 9f89fad2d4f6745558581f3fd904f887 376 PANTHER PTHR13370 3 286 2.2E-72 T 22-04-2016 NHAM_RS14515 7adbb41fac94c7e63e6bb55b3eb4c3f7 512 Gene3D G3DSA:1.10.3290.10 279 509 9.0E-49 T 22-04-2016 IPR003812 Fido domain NHAM_RS14515 7adbb41fac94c7e63e6bb55b3eb4c3f7 512 Pfam PF02661 Fic/DOC family 367 462 1.5E-12 T 22-04-2016 IPR003812 Fido domain NHAM_RS14515 7adbb41fac94c7e63e6bb55b3eb4c3f7 512 PANTHER PTHR13504 101 505 3.6E-55 T 22-04-2016 NHAM_RS14515 7adbb41fac94c7e63e6bb55b3eb4c3f7 512 SUPERFAMILY SSF140931 331 509 1.57E-28 T 22-04-2016 IPR003812 Fido domain NHAM_RS14515 7adbb41fac94c7e63e6bb55b3eb4c3f7 512 PANTHER PTHR13504:SF32 101 505 3.6E-55 T 22-04-2016 NHAM_RS09725 e5b073cc1e1de656e9abac46eef0cb3b 131 Gene3D G3DSA:3.40.50.2300 9 127 2.6E-27 T 22-04-2016 NHAM_RS09725 e5b073cc1e1de656e9abac46eef0cb3b 131 Pfam PF00072 Response regulator receiver domain 11 120 1.4E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS09725 e5b073cc1e1de656e9abac46eef0cb3b 131 PANTHER PTHR26402:SF497 9 130 1.0E-33 T 22-04-2016 NHAM_RS09725 e5b073cc1e1de656e9abac46eef0cb3b 131 SUPERFAMILY SSF52172 8 128 1.99E-28 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS09725 e5b073cc1e1de656e9abac46eef0cb3b 131 PANTHER PTHR26402 9 130 1.0E-33 T 22-04-2016 NHAM_RS09725 e5b073cc1e1de656e9abac46eef0cb3b 131 SMART SM00448 9 120 5.0E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS00435 0de27f0be6d7920b19854f2de1820a97 286 PANTHER PTHR11066:SF34 1 286 1.6E-118 T 22-04-2016 NHAM_RS00435 0de27f0be6d7920b19854f2de1820a97 286 Gene3D G3DSA:3.10.129.10 124 284 1.5E-56 T 22-04-2016 IPR029069 HotDog domain NHAM_RS00435 0de27f0be6d7920b19854f2de1820a97 286 Pfam PF13622 Thioesterase-like superfamily 33 282 2.2E-66 T 22-04-2016 NHAM_RS00435 0de27f0be6d7920b19854f2de1820a97 286 SUPERFAMILY SSF54637 5 113 3.23E-40 T 22-04-2016 IPR029069 HotDog domain NHAM_RS00435 0de27f0be6d7920b19854f2de1820a97 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 1.3E-95 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 NHAM_RS00435 0de27f0be6d7920b19854f2de1820a97 286 SUPERFAMILY SSF54637 116 284 7.07E-58 T 22-04-2016 IPR029069 HotDog domain NHAM_RS00435 0de27f0be6d7920b19854f2de1820a97 286 Gene3D G3DSA:3.10.129.10 5 113 1.2E-48 T 22-04-2016 IPR029069 HotDog domain NHAM_RS00435 0de27f0be6d7920b19854f2de1820a97 286 PANTHER PTHR11066 1 286 1.6E-118 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 NHAM_RS02035 b0f6d53058ddd58ed0b946a282bd2445 246 Pfam PF09476 Pilus biogenesis CpaD protein (pilus_cpaD) 20 225 4.3E-73 T 22-04-2016 IPR019027 Pilus biogenesis CpaD-related NHAM_RS02035 b0f6d53058ddd58ed0b946a282bd2445 246 TIGRFAM TIGR02522 pilus_cpaD: pilus (Caulobacter type) biogenesis lipoprotein CpaD 17 226 1.4E-60 T 22-04-2016 IPR013361 Pilus biogenesis CpaD NHAM_RS16295 170ebf6ddd7576451767bbed8948da04 434 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 40 213 6.3E-55 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 NHAM_RS16295 170ebf6ddd7576451767bbed8948da04 434 PANTHER PTHR23417:SF2 1 116 1.9E-115 T 22-04-2016 NHAM_RS16295 170ebf6ddd7576451767bbed8948da04 434 PANTHER PTHR23417:SF2 185 434 1.9E-115 T 22-04-2016 NHAM_RS16295 170ebf6ddd7576451767bbed8948da04 434 PANTHER PTHR23417:SF2 135 145 1.9E-115 T 22-04-2016 NHAM_RS16295 170ebf6ddd7576451767bbed8948da04 434 SUPERFAMILY SSF53756 58 421 5.49E-7 T 22-04-2016 NHAM_RS16295 170ebf6ddd7576451767bbed8948da04 434 PANTHER PTHR23417 1 116 1.9E-115 T 22-04-2016 NHAM_RS16295 170ebf6ddd7576451767bbed8948da04 434 PANTHER PTHR23417 185 434 1.9E-115 T 22-04-2016 NHAM_RS16295 170ebf6ddd7576451767bbed8948da04 434 PANTHER PTHR23417 135 145 1.9E-115 T 22-04-2016 NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 SMART SM00086 356 398 1.2E-6 T 22-04-2016 IPR001610 PAC motif NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 SMART SM00086 231 273 56.0 T 22-04-2016 IPR001610 PAC motif NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 Gene3D G3DSA:3.30.450.20 151 271 5.5E-20 T 22-04-2016 NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 Gene3D G3DSA:3.30.450.20 276 395 6.2E-30 T 22-04-2016 NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 Pfam PF08448 PAS fold 38 144 4.1E-6 T 22-04-2016 IPR013656 PAS fold-4 NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 Pfam PF07536 HWE histidine kinase 411 494 2.0E-16 T 22-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 SUPERFAMILY SSF55785 48 151 7.68E-5 T 22-04-2016 IPR000014 PAS domain NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 SUPERFAMILY SSF55785 140 271 1.31E-13 T 22-04-2016 IPR000014 PAS domain NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 SMART SM00091 26 91 40.0 T 22-04-2016 IPR000014 PAS domain NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 SMART SM00091 154 225 1.9 T 22-04-2016 IPR000014 PAS domain NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 SMART SM00091 285 350 0.0065 T 22-04-2016 IPR000014 PAS domain NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 SMART SM00911 411 495 6.2E-27 T 22-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 283 399 1.7E-14 T 22-04-2016 IPR000014 PAS domain NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 Gene3D G3DSA:3.30.450.20 48 150 5.1E-7 T 22-04-2016 NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 SUPERFAMILY SSF55785 270 395 2.44E-24 T 22-04-2016 IPR000014 PAS domain NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 PANTHER PTHR24423:SF509 1 398 7.0E-36 T 22-04-2016 NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 Pfam PF08447 PAS fold 309 391 7.9E-18 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 Pfam PF08447 PAS fold 178 267 1.2E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 PANTHER PTHR24423 1 398 7.0E-36 T 22-04-2016 NHAM_RS23950 734d60ab6290699640ffd8b9533829ca 603 SUPERFAMILY SSF55874 475 595 1.35E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11050 670fc20cb1c22aebf270eb5840f9bb23 756 SMART SM00044 475 677 1.2E-13 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 NHAM_RS11050 670fc20cb1c22aebf270eb5840f9bb23 756 PANTHER PTHR11920:SF341 477 708 1.9E-57 T 22-04-2016 NHAM_RS11050 670fc20cb1c22aebf270eb5840f9bb23 756 PANTHER PTHR11920 477 708 1.9E-57 T 22-04-2016 NHAM_RS11050 670fc20cb1c22aebf270eb5840f9bb23 756 Pfam PF05226 CHASE2 domain 41 400 4.5E-54 T 22-04-2016 IPR007890 CHASE2 NHAM_RS11050 670fc20cb1c22aebf270eb5840f9bb23 756 Gene3D G3DSA:3.30.70.1230 499 689 8.1E-44 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 NHAM_RS11050 670fc20cb1c22aebf270eb5840f9bb23 756 SMART SM01080 55 402 1.8E-82 T 22-04-2016 IPR007890 CHASE2 NHAM_RS11050 670fc20cb1c22aebf270eb5840f9bb23 756 SUPERFAMILY SSF55073 495 690 2.67E-54 T 22-04-2016 IPR029787 Nucleotide cyclase NHAM_RS11050 670fc20cb1c22aebf270eb5840f9bb23 756 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 500 684 9.6E-33 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 NHAM_RS06665 038408175e571db41157b18119241a78 508 PRINTS PR01806 Virulence factor MviN signature 50 66 4.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS06665 038408175e571db41157b18119241a78 508 PRINTS PR01806 Virulence factor MviN signature 130 154 4.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS06665 038408175e571db41157b18119241a78 508 PRINTS PR01806 Virulence factor MviN signature 255 281 4.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS06665 038408175e571db41157b18119241a78 508 PRINTS PR01806 Virulence factor MviN signature 31 50 4.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS06665 038408175e571db41157b18119241a78 508 PRINTS PR01806 Virulence factor MviN signature 353 372 4.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS06665 038408175e571db41157b18119241a78 508 PRINTS PR01806 Virulence factor MviN signature 154 175 4.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS06665 038408175e571db41157b18119241a78 508 PRINTS PR01806 Virulence factor MviN signature 405 422 4.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS06665 038408175e571db41157b18119241a78 508 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 7 490 8.7E-114 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS06665 038408175e571db41157b18119241a78 508 PANTHER PTHR11206 116 122 2.8E-56 T 22-04-2016 NHAM_RS06665 038408175e571db41157b18119241a78 508 PANTHER PTHR11206 463 483 2.8E-56 T 22-04-2016 NHAM_RS06665 038408175e571db41157b18119241a78 508 PANTHER PTHR11206 211 439 2.8E-56 T 22-04-2016 NHAM_RS06665 038408175e571db41157b18119241a78 508 PANTHER PTHR11206 75 84 2.8E-56 T 22-04-2016 NHAM_RS06665 038408175e571db41157b18119241a78 508 PIRSF PIRSF002869 1 508 6.5E-135 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS06665 038408175e571db41157b18119241a78 508 PANTHER PTHR11206:SF90 116 122 2.8E-56 T 22-04-2016 NHAM_RS06665 038408175e571db41157b18119241a78 508 PANTHER PTHR11206:SF90 463 483 2.8E-56 T 22-04-2016 NHAM_RS06665 038408175e571db41157b18119241a78 508 PANTHER PTHR11206:SF90 211 439 2.8E-56 T 22-04-2016 NHAM_RS06665 038408175e571db41157b18119241a78 508 PANTHER PTHR11206:SF90 75 84 2.8E-56 T 22-04-2016 NHAM_RS06665 038408175e571db41157b18119241a78 508 Pfam PF03023 MviN-like protein 26 470 5.1E-109 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS15300 48aae4f58412665ae6503ac23ff51af7 341 Pfam PF03781 Sulfatase-modifying factor enzyme 1 20 322 5.6E-90 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme NHAM_RS15300 48aae4f58412665ae6503ac23ff51af7 341 Gene3D G3DSA:3.90.1580.10 13 323 9.7E-101 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme NHAM_RS15300 48aae4f58412665ae6503ac23ff51af7 341 SUPERFAMILY SSF56436 21 322 1.09E-96 T 22-04-2016 IPR016187 C-type lectin fold NHAM_RS15300 48aae4f58412665ae6503ac23ff51af7 341 PANTHER PTHR23150 13 267 6.5E-110 T 22-04-2016 NHAM_RS15300 48aae4f58412665ae6503ac23ff51af7 341 PANTHER PTHR23150 283 322 6.5E-110 T 22-04-2016 NHAM_RS01730 169a09a992d9129e02c3cb15179940d7 542 PANTHER PTHR41287 7 537 9.1E-74 T 22-04-2016 NHAM_RS01730 169a09a992d9129e02c3cb15179940d7 542 Pfam PF03354 Phage Terminase 50 518 5.9E-50 T 22-04-2016 IPR005021 Phage terminase NHAM_RS10245 b04d2644abee9bba2caebd77d7f82d64 312 PANTHER PTHR34183:SF1 54 280 1.1E-73 T 22-04-2016 NHAM_RS10245 b04d2644abee9bba2caebd77d7f82d64 312 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 88 181 2.5E-40 T 22-04-2016 IPR012997 Rare lipoprotein A NHAM_RS10245 b04d2644abee9bba2caebd77d7f82d64 312 PANTHER PTHR34183 54 280 1.1E-73 T 22-04-2016 NHAM_RS10245 b04d2644abee9bba2caebd77d7f82d64 312 Pfam PF03330 Lytic transglycolase 86 175 1.9E-23 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NHAM_RS10245 b04d2644abee9bba2caebd77d7f82d64 312 SUPERFAMILY SSF50685 82 178 1.46E-9 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NHAM_RS20310 3b96b4aa4e481164dd1f07e654236cfc 520 SUPERFAMILY SSF141523 59 169 2.75E-27 T 22-04-2016 NHAM_RS20310 3b96b4aa4e481164dd1f07e654236cfc 520 PANTHER PTHR30582:SF2 58 252 6.5E-49 T 22-04-2016 NHAM_RS20310 3b96b4aa4e481164dd1f07e654236cfc 520 Gene3D G3DSA:2.40.440.10 63 169 6.1E-20 T 22-04-2016 NHAM_RS20310 3b96b4aa4e481164dd1f07e654236cfc 520 PANTHER PTHR30582 58 252 6.5E-49 T 22-04-2016 NHAM_RS20310 3b96b4aa4e481164dd1f07e654236cfc 520 Pfam PF03734 L,D-transpeptidase catalytic domain 63 169 2.7E-18 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NHAM_RS11845 7204ae860c1a7bf586ac58857dde6379 414 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 15 413 2.1E-178 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 NHAM_RS11845 7204ae860c1a7bf586ac58857dde6379 414 PANTHER PTHR11601:SF17 15 414 4.6E-186 T 22-04-2016 NHAM_RS11845 7204ae860c1a7bf586ac58857dde6379 414 Gene3D G3DSA:3.40.640.10 45 291 1.7E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS11845 7204ae860c1a7bf586ac58857dde6379 414 SUPERFAMILY SSF53383 12 410 2.29E-123 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS11845 7204ae860c1a7bf586ac58857dde6379 414 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 225 244 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NHAM_RS11845 7204ae860c1a7bf586ac58857dde6379 414 PANTHER PTHR11601 15 414 4.6E-186 T 22-04-2016 NHAM_RS11845 7204ae860c1a7bf586ac58857dde6379 414 Gene3D G3DSA:3.90.1150.10 292 406 2.5E-26 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS11845 7204ae860c1a7bf586ac58857dde6379 414 Pfam PF00266 Aminotransferase class-V 33 402 1.2E-143 T 22-04-2016 IPR000192 Aminotransferase class V domain NHAM_RS05185 a16b79c5b4a2cb139bc456908cbbbdb4 180 Gene3D G3DSA:3.90.1340.10 1 66 2.9E-26 T 22-04-2016 IPR011083 Phage tail collar domain NHAM_RS05185 a16b79c5b4a2cb139bc456908cbbbdb4 180 Pfam PF07484 Phage Tail Collar Domain 6 61 3.2E-22 T 22-04-2016 IPR011083 Phage tail collar domain NHAM_RS05185 a16b79c5b4a2cb139bc456908cbbbdb4 180 PANTHER PTHR34720 1 179 2.2E-45 T 22-04-2016 NHAM_RS05185 a16b79c5b4a2cb139bc456908cbbbdb4 180 SUPERFAMILY SSF88874 1 170 3.14E-47 T 22-04-2016 NHAM_RS00195 f82152fa9dd4d4681b83d46404babfbc 277 PANTHER PTHR24322:SF317 159 191 9.4E-50 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 NHAM_RS00195 f82152fa9dd4d4681b83d46404babfbc 277 PANTHER PTHR24322:SF317 12 143 9.4E-50 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 NHAM_RS00195 f82152fa9dd4d4681b83d46404babfbc 277 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 7.8E-80 T 22-04-2016 NHAM_RS00195 f82152fa9dd4d4681b83d46404babfbc 277 Gene3D G3DSA:3.40.50.720 7 201 4.5E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00195 f82152fa9dd4d4681b83d46404babfbc 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.4E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS00195 f82152fa9dd4d4681b83d46404babfbc 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.4E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS00195 f82152fa9dd4d4681b83d46404babfbc 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.4E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS00195 f82152fa9dd4d4681b83d46404babfbc 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.4E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS00195 f82152fa9dd4d4681b83d46404babfbc 277 SUPERFAMILY SSF51735 6 254 8.26E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00195 f82152fa9dd4d4681b83d46404babfbc 277 PIRSF PIRSF000094 2 260 1.0E-105 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 NHAM_RS00195 f82152fa9dd4d4681b83d46404babfbc 277 PANTHER PTHR24322 159 191 9.4E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS00195 f82152fa9dd4d4681b83d46404babfbc 277 PANTHER PTHR24322 12 143 9.4E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 SUPERFAMILY SSF55874 286 458 2.49E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 SMART SM00448 619 740 7.1E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 SMART SM00448 474 583 0.06 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 Gene3D G3DSA:1.10.287.130 237 292 6.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 455 3.7E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 Gene3D G3DSA:3.40.50.2300 470 586 1.0E-7 T 22-04-2016 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 SUPERFAMILY SSF52172 474 594 4.27E-10 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 Pfam PF00072 Response regulator receiver domain 621 740 3.7E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 SMART SM00387 343 456 7.2E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 PANTHER PTHR24423:SF491 90 470 1.0E-163 T 22-04-2016 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 PANTHER PTHR24423:SF491 618 747 1.0E-163 T 22-04-2016 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 SMART SM00388 231 296 7.0E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 3.7E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 3.7E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 3.7E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 3.7E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 Gene3D G3DSA:3.30.450.20 104 236 3.1E-11 T 22-04-2016 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 Pfam PF13188 PAS domain 106 154 1.8E-4 T 22-04-2016 IPR000014 PAS domain NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 296 4.6E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 Gene3D G3DSA:3.40.50.2300 617 745 4.8E-38 T 22-04-2016 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 SMART SM00091 106 172 0.0028 T 22-04-2016 IPR000014 PAS domain NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 SUPERFAMILY SSF47384 217 297 2.16E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 PANTHER PTHR24423 90 470 1.0E-163 T 22-04-2016 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 PANTHER PTHR24423 618 747 1.0E-163 T 22-04-2016 NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 102 218 1.4E-5 T 22-04-2016 IPR000014 PAS domain NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 SUPERFAMILY SSF55785 99 209 2.27E-11 T 22-04-2016 IPR000014 PAS domain NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 Gene3D G3DSA:3.30.565.10 297 461 2.6E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS00645 8161f68c75b2202dcdd0c884b58678e6 751 SUPERFAMILY SSF52172 616 744 4.98E-36 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS04865 8d3c2eace5197411ad8f9b1d29c37dd1 554 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 2 134 6.0E-34 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- NHAM_RS04865 8d3c2eace5197411ad8f9b1d29c37dd1 554 Gene3D G3DSA:3.50.50.60 150 263 2.5E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS04865 8d3c2eace5197411ad8f9b1d29c37dd1 554 Gene3D G3DSA:3.50.50.60 406 470 2.5E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS04865 8d3c2eace5197411ad8f9b1d29c37dd1 554 SUPERFAMILY SSF51905 345 469 1.15E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS04865 8d3c2eace5197411ad8f9b1d29c37dd1 554 SUPERFAMILY SSF51905 149 248 1.15E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS04865 8d3c2eace5197411ad8f9b1d29c37dd1 554 PANTHER PTHR10632 149 544 2.5E-168 T 22-04-2016 NHAM_RS04865 8d3c2eace5197411ad8f9b1d29c37dd1 554 Gene3D G3DSA:3.90.190.10 1 137 4.6E-43 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like NHAM_RS04865 8d3c2eace5197411ad8f9b1d29c37dd1 554 PANTHER PTHR10632:SF2 149 544 2.5E-168 T 22-04-2016 NHAM_RS04865 8d3c2eace5197411ad8f9b1d29c37dd1 554 Pfam PF04273 Putative phosphatase (DUF442) 3 110 4.5E-32 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- NHAM_RS04865 8d3c2eace5197411ad8f9b1d29c37dd1 554 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 275 7.0E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS08885 7b897651c1b50e06a5e2997b1a8d0e55 542 SUPERFAMILY SSF52540 1 268 2.6E-117 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08885 7b897651c1b50e06a5e2997b1a8d0e55 542 Pfam PF00117 Glutamine amidotransferase class-I 300 534 9.2E-56 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 NHAM_RS08885 7b897651c1b50e06a5e2997b1a8d0e55 542 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 6.6E-227 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 NHAM_RS08885 7b897651c1b50e06a5e2997b1a8d0e55 542 Hamap MF_01227 CTP synthase [pyrG]. 2 539 49.753 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 NHAM_RS08885 7b897651c1b50e06a5e2997b1a8d0e55 542 Gene3D G3DSA:3.40.50.880 287 536 1.9E-95 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS08885 7b897651c1b50e06a5e2997b1a8d0e55 542 Pfam PF06418 CTP synthase N-terminus 3 264 4.3E-116 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 NHAM_RS08885 7b897651c1b50e06a5e2997b1a8d0e55 542 SUPERFAMILY SSF52317 288 535 5.92E-78 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS08885 7b897651c1b50e06a5e2997b1a8d0e55 542 Gene3D G3DSA:3.40.50.300 1 283 2.0E-122 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 SUPERFAMILY SSF53335 468 643 4.69E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 SUPERFAMILY SSF51905 2 308 4.53E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 SUPERFAMILY SSF51905 414 425 4.53E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 Gene3D G3DSA:3.90.660.10 42 112 2.6E-11 T 22-04-2016 NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 Gene3D G3DSA:3.90.660.10 293 386 2.6E-11 T 22-04-2016 NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 Gene3D G3DSA:3.50.50.60 3 41 9.6E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 Gene3D G3DSA:3.50.50.60 203 288 9.6E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 PANTHER PTHR10742 1 469 2.4E-32 T 22-04-2016 NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 SUPERFAMILY SSF54373 292 389 2.64E-11 T 22-04-2016 NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 Gene3D G3DSA:3.40.50.150 502 647 1.3E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 Pfam PF08241 Methyltransferase domain 510 594 1.5E-6 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 Pfam PF01593 Flavin containing amine oxidoreductase 12 430 1.0E-25 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 PRINTS PR00419 Adrenodoxin reductase family signature 29 42 9.7E-5 T 22-04-2016 NHAM_RS07855 d95dd25c2245b705da179f8ec9294d6d 682 PRINTS PR00419 Adrenodoxin reductase family signature 3 25 9.7E-5 T 22-04-2016 NHAM_RS11140 1d7f84de308e75628df518dc21a9aee0 162 SUPERFAMILY SSF51230 87 162 5.1E-23 T 22-04-2016 IPR011053 Single hybrid motif NHAM_RS11140 1d7f84de308e75628df518dc21a9aee0 162 Gene3D G3DSA:2.40.50.100 86 162 2.6E-27 T 22-04-2016 NHAM_RS11140 1d7f84de308e75628df518dc21a9aee0 162 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 118 135 - T 22-04-2016 IPR001882 Biotin-binding site NHAM_RS11140 1d7f84de308e75628df518dc21a9aee0 162 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 24 162 1.4E-35 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 NHAM_RS11140 1d7f84de308e75628df518dc21a9aee0 162 PANTHER PTHR23151 24 162 3.2E-28 T 22-04-2016 NHAM_RS11140 1d7f84de308e75628df518dc21a9aee0 162 Pfam PF00364 Biotin-requiring enzyme 89 161 6.4E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment NHAM_RS11140 1d7f84de308e75628df518dc21a9aee0 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 91 104 3.1E-11 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 NHAM_RS11140 1d7f84de308e75628df518dc21a9aee0 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 123 136 3.1E-11 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 NHAM_RS11140 1d7f84de308e75628df518dc21a9aee0 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 108 122 3.1E-11 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 NHAM_RS11480 5d95a0f8e728e7b169bdca929ee0a75d 139 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 132 7.4E-20 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NHAM_RS11480 5d95a0f8e728e7b169bdca929ee0a75d 139 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 133 23.837 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NHAM_RS11480 5d95a0f8e728e7b169bdca929ee0a75d 139 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 102 3.1E-18 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NHAM_RS11480 5d95a0f8e728e7b169bdca929ee0a75d 139 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 95 1.0E-36 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NHAM_RS11480 5d95a0f8e728e7b169bdca929ee0a75d 139 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 133 8.9E-26 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NHAM_RS11480 5d95a0f8e728e7b169bdca929ee0a75d 139 Gene3D G3DSA:3.90.470.20 1 131 3.2E-35 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NHAM_RS11480 5d95a0f8e728e7b169bdca929ee0a75d 139 SUPERFAMILY SSF56214 1 131 2.35E-27 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NHAM_RS02245 e4cd27485a2ef7de24d0d05ee21c701c 274 SUPERFAMILY SSF55920 22 267 1.11E-84 T 22-04-2016 IPR000994 Peptidase M24, structural domain NHAM_RS02245 e4cd27485a2ef7de24d0d05ee21c701c 274 Pfam PF00557 Metallopeptidase family M24 27 253 7.8E-50 T 22-04-2016 IPR000994 Peptidase M24, structural domain NHAM_RS02245 e4cd27485a2ef7de24d0d05ee21c701c 274 Hamap MF_01974 Methionine aminopeptidase [map]. 17 263 38.018 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 NHAM_RS02245 e4cd27485a2ef7de24d0d05ee21c701c 274 PANTHER PTHR10804:SF82 16 272 2.0E-124 T 22-04-2016 NHAM_RS02245 e4cd27485a2ef7de24d0d05ee21c701c 274 PANTHER PTHR10804 16 272 2.0E-124 T 22-04-2016 NHAM_RS02245 e4cd27485a2ef7de24d0d05ee21c701c 274 Gene3D G3DSA:3.90.230.10 20 268 6.6E-88 T 22-04-2016 IPR000994 Peptidase M24, structural domain NHAM_RS02245 e4cd27485a2ef7de24d0d05ee21c701c 274 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 19 262 6.8E-85 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 NHAM_RS02245 e4cd27485a2ef7de24d0d05ee21c701c 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 104 120 2.9E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase NHAM_RS02245 e4cd27485a2ef7de24d0d05ee21c701c 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 174 186 2.9E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase NHAM_RS02245 e4cd27485a2ef7de24d0d05ee21c701c 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 205 217 2.9E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase NHAM_RS02245 e4cd27485a2ef7de24d0d05ee21c701c 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 82 95 2.9E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase NHAM_RS18325 92bf3b0713301cb6bfcf4e27b19b35c2 556 Pfam PF03924 CHASE domain 95 226 1.3E-10 T 22-04-2016 IPR006189 CHASE domain NHAM_RS18325 92bf3b0713301cb6bfcf4e27b19b35c2 556 SMART SM00911 347 425 1.6E-29 T 22-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 NHAM_RS18325 92bf3b0713301cb6bfcf4e27b19b35c2 556 Pfam PF07536 HWE histidine kinase 347 425 2.2E-22 T 22-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 NHAM_RS18325 92bf3b0713301cb6bfcf4e27b19b35c2 556 PANTHER PTHR41523 6 538 0.0 T 22-04-2016 NHAM_RS18325 92bf3b0713301cb6bfcf4e27b19b35c2 556 SMART SM01079 68 252 9.6E-26 T 22-04-2016 IPR006189 CHASE domain NHAM_RS18325 92bf3b0713301cb6bfcf4e27b19b35c2 556 PANTHER PTHR41523:SF3 6 538 0.0 T 22-04-2016 NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 PRINTS PR00996 Glutamate methyltransferase family signature 278 290 1.8E-11 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 PRINTS PR00996 Glutamate methyltransferase family signature 318 338 1.8E-11 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 PRINTS PR00996 Glutamate methyltransferase family signature 354 370 1.8E-11 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 PRINTS PR00996 Glutamate methyltransferase family signature 241 254 1.8E-11 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 PANTHER PTHR24422 109 420 1.8E-104 T 22-04-2016 NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 Pfam PF01339 CheB methylesterase 21 196 2.4E-53 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 Gene3D G3DSA:3.40.50.180 15 201 1.6E-63 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 Gene3D G3DSA:1.10.155.10 219 282 2.3E-14 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 SUPERFAMILY SSF53335 286 417 4.1E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 Pfam PF03705 CheR methyltransferase, all-alpha domain 222 272 4.5E-14 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 Gene3D G3DSA:3.40.50.150 284 419 5.0E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 SUPERFAMILY SSF47757 218 287 4.45E-13 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 Pfam PF01739 CheR methyltransferase, SAM binding domain 286 418 8.5E-33 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 PANTHER PTHR24422:SF6 109 420 1.8E-104 T 22-04-2016 NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 SMART SM00138 219 430 6.8E-28 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NHAM_RS20430 9ebaeef5c647d04a4f8fc6171df92ab9 432 SUPERFAMILY SSF52738 16 202 2.75E-54 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NHAM_RS02180 fc03300280e7b840363a86447cd49b8a 734 Pfam PF14742 N-terminal domain of (some) glycogen debranching enzymes 39 231 1.4E-51 T 22-04-2016 IPR032856 Putative glycogen debranching enzyme, N-terminal NHAM_RS02180 fc03300280e7b840363a86447cd49b8a 734 Pfam PF06202 Amylo-alpha-1,6-glucosidase 293 658 8.6E-10 T 22-04-2016 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25+3.2.1.33|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 NHAM_RS02180 fc03300280e7b840363a86447cd49b8a 734 PANTHER PTHR10569 266 339 2.0E-185 T 22-04-2016 IPR010401 Glycogen debranching enzyme GO:0004134|GO:0004135|GO:0005980 KEGG: 00500+3.2.1.33+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 NHAM_RS02180 fc03300280e7b840363a86447cd49b8a 734 PANTHER PTHR10569 359 676 2.0E-185 T 22-04-2016 IPR010401 Glycogen debranching enzyme GO:0004134|GO:0004135|GO:0005980 KEGG: 00500+3.2.1.33+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 NHAM_RS02180 fc03300280e7b840363a86447cd49b8a 734 PANTHER PTHR10569:SF1 266 339 2.0E-185 T 22-04-2016 NHAM_RS02180 fc03300280e7b840363a86447cd49b8a 734 PANTHER PTHR10569:SF1 359 676 2.0E-185 T 22-04-2016 NHAM_RS02180 fc03300280e7b840363a86447cd49b8a 734 SUPERFAMILY SSF48208 248 713 2.14E-90 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 SUPERFAMILY SSF110111 53 174 1.28E-47 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 Gene3D G3DSA:1.10.760.10 194 289 5.4E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 PANTHER PTHR21320 32 187 1.1E-55 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 PANTHER PTHR21320:SF3 32 187 1.1E-55 T 22-04-2016 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 PRINTS PR00604 Class IA and IB cytochrome C signature 264 274 9.1E-15 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 PRINTS PR00604 Class IA and IB cytochrome C signature 215 230 9.1E-15 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 PRINTS PR00604 Class IA and IB cytochrome C signature 280 288 9.1E-15 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 PRINTS PR00604 Class IA and IB cytochrome C signature 205 212 9.1E-15 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 PRINTS PR00604 Class IA and IB cytochrome C signature 231 241 9.1E-15 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 PRINTS PR00604 Class IA and IB cytochrome C signature 245 261 9.1E-15 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 180 34.485 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 32 172 1.3E-53 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 Gene3D G3DSA:2.60.370.10 56 180 2.0E-51 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 Pfam PF00034 Cytochrome c 197 289 2.0E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS03365 21e7991c5e3a184b9ea51cbb19bd4f3a 308 SUPERFAMILY SSF46626 193 290 3.65E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS02225 ba1991d07f35719d6b996a963a330e2d 271 SUPERFAMILY SSF161098 61 246 9.81E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS02225 ba1991d07f35719d6b996a963a330e2d 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 252 1.3E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS02225 ba1991d07f35719d6b996a963a330e2d 271 PANTHER PTHR30151 1 263 1.1E-102 T 22-04-2016 NHAM_RS02225 ba1991d07f35719d6b996a963a330e2d 271 PANTHER PTHR30151:SF9 1 263 1.1E-102 T 22-04-2016 NHAM_RS02225 ba1991d07f35719d6b996a963a330e2d 271 Gene3D G3DSA:1.10.3720.10 58 251 3.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS19720 79d16577b7c0f786e59c67eefd0af320 978 PANTHER PTHR33841 3 851 1.3E-210 T 22-04-2016 NHAM_RS19720 79d16577b7c0f786e59c67eefd0af320 978 SUPERFAMILY SSF53335 166 427 1.59E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS19720 79d16577b7c0f786e59c67eefd0af320 978 SUPERFAMILY SSF53335 455 602 1.59E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS19720 79d16577b7c0f786e59c67eefd0af320 978 Pfam PF02384 N-6 DNA Methylase 338 541 3.0E-7 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 NHAM_RS19720 79d16577b7c0f786e59c67eefd0af320 978 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 480 486 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NHAM_RS19720 79d16577b7c0f786e59c67eefd0af320 978 PANTHER PTHR33841:SF3 3 851 1.3E-210 T 22-04-2016 NHAM_RS19720 79d16577b7c0f786e59c67eefd0af320 978 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 477 489 7.7E-7 T 22-04-2016 NHAM_RS19720 79d16577b7c0f786e59c67eefd0af320 978 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 355 369 7.7E-7 T 22-04-2016 NHAM_RS19720 79d16577b7c0f786e59c67eefd0af320 978 Gene3D G3DSA:3.40.50.150 340 424 7.1E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS19720 79d16577b7c0f786e59c67eefd0af320 978 Gene3D G3DSA:3.40.50.150 463 597 7.1E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS02775 87da33784413981b520f244511ef045e 186 Gene3D G3DSA:1.10.520.20 7 113 1.7E-24 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain NHAM_RS02775 87da33784413981b520f244511ef045e 186 PRINTS PR00125 ATP synthase delta subunit signature 11 30 1.9E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NHAM_RS02775 87da33784413981b520f244511ef045e 186 PRINTS PR00125 ATP synthase delta subunit signature 142 157 1.9E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NHAM_RS02775 87da33784413981b520f244511ef045e 186 PRINTS PR00125 ATP synthase delta subunit signature 92 106 1.9E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NHAM_RS02775 87da33784413981b520f244511ef045e 186 PRINTS PR00125 ATP synthase delta subunit signature 81 92 1.9E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NHAM_RS02775 87da33784413981b520f244511ef045e 186 PRINTS PR00125 ATP synthase delta subunit signature 157 175 1.9E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NHAM_RS02775 87da33784413981b520f244511ef045e 186 Hamap MF_01416 ATP synthase subunit delta [atpD]. 7 184 19.376 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NHAM_RS02775 87da33784413981b520f244511ef045e 186 SUPERFAMILY SSF47928 8 112 1.7E-23 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain NHAM_RS02775 87da33784413981b520f244511ef045e 186 PANTHER PTHR11910 8 186 1.9E-59 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NHAM_RS02775 87da33784413981b520f244511ef045e 186 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 11 180 1.3E-34 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NHAM_RS02775 87da33784413981b520f244511ef045e 186 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 144 163 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 NHAM_RS02775 87da33784413981b520f244511ef045e 186 Pfam PF00213 ATP synthase delta (OSCP) subunit 11 182 1.1E-48 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 NHAM_RS13460 bc84b95b858a06156e36bbdbe8887ac9 468 SUPERFAMILY SSF53187 7 207 3.41E-57 T 22-04-2016 NHAM_RS13460 bc84b95b858a06156e36bbdbe8887ac9 468 SUPERFAMILY SSF53187 378 465 3.41E-57 T 22-04-2016 NHAM_RS13460 bc84b95b858a06156e36bbdbe8887ac9 468 PANTHER PTHR11014 5 276 2.4E-139 T 22-04-2016 NHAM_RS13460 bc84b95b858a06156e36bbdbe8887ac9 468 PANTHER PTHR11014 294 468 2.4E-139 T 22-04-2016 NHAM_RS13460 bc84b95b858a06156e36bbdbe8887ac9 468 Gene3D G3DSA:3.30.70.360 207 372 2.6E-55 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS13460 bc84b95b858a06156e36bbdbe8887ac9 468 Pfam PF01546 Peptidase family M20/M25/M40 88 461 8.1E-35 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NHAM_RS13460 bc84b95b858a06156e36bbdbe8887ac9 468 Gene3D G3DSA:3.40.630.10 8 201 7.2E-58 T 22-04-2016 NHAM_RS13460 bc84b95b858a06156e36bbdbe8887ac9 468 Gene3D G3DSA:3.40.630.10 377 465 7.2E-58 T 22-04-2016 NHAM_RS13460 bc84b95b858a06156e36bbdbe8887ac9 468 PANTHER PTHR11014:SF72 5 276 2.4E-139 T 22-04-2016 NHAM_RS13460 bc84b95b858a06156e36bbdbe8887ac9 468 PANTHER PTHR11014:SF72 294 468 2.4E-139 T 22-04-2016 NHAM_RS13460 bc84b95b858a06156e36bbdbe8887ac9 468 Pfam PF07687 Peptidase dimerisation domain 205 364 2.7E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain NHAM_RS14265 a2eb3e7a70b2cf95278fb39a64bed680 250 SUPERFAMILY SSF52540 70 239 1.74E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14265 a2eb3e7a70b2cf95278fb39a64bed680 250 PANTHER PTHR30050 8 248 4.9E-80 T 22-04-2016 NHAM_RS14265 a2eb3e7a70b2cf95278fb39a64bed680 250 PANTHER PTHR30050:SF6 8 248 4.9E-80 T 22-04-2016 NHAM_RS14265 a2eb3e7a70b2cf95278fb39a64bed680 250 Gene3D G3DSA:3.40.50.300 90 230 1.2E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14265 a2eb3e7a70b2cf95278fb39a64bed680 250 PIRSF PIRSF003073 1 248 5.8E-73 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein NHAM_RS14265 a2eb3e7a70b2cf95278fb39a64bed680 250 Pfam PF08483 IstB-like ATP binding N-terminal 24 52 5.7E-7 T 22-04-2016 IPR013690 IstB-like ATP binding N-terminal NHAM_RS14265 a2eb3e7a70b2cf95278fb39a64bed680 250 Pfam PF01695 IstB-like ATP binding protein 53 229 1.8E-65 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 NHAM_RS05180 16488ea7fdcf10946d7968f1bd83f95b 176 PANTHER PTHR34720 1 176 2.0E-49 T 22-04-2016 NHAM_RS05180 16488ea7fdcf10946d7968f1bd83f95b 176 Gene3D G3DSA:3.90.1340.10 1 68 2.8E-28 T 22-04-2016 IPR011083 Phage tail collar domain NHAM_RS05180 16488ea7fdcf10946d7968f1bd83f95b 176 SUPERFAMILY SSF88874 1 170 2.09E-45 T 22-04-2016 NHAM_RS05180 16488ea7fdcf10946d7968f1bd83f95b 176 Pfam PF07484 Phage Tail Collar Domain 7 63 1.2E-23 T 22-04-2016 IPR011083 Phage tail collar domain NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 373 4.3E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 SUPERFAMILY SSF52540 96 379 1.7E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 Gene3D G3DSA:1.20.150.20 381 509 3.8E-54 T 22-04-2016 NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 Gene3D G3DSA:3.40.50.300 95 380 2.9E-122 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 510 51.34 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 SUPERFAMILY SSF47917 381 509 3.4E-47 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 PIRSF PIRSF039088 1 510 5.3E-279 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 PANTHER PTHR15184 1 494 0.0 T 22-04-2016 NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 PANTHER PTHR15184:SF3 1 494 0.0 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 380 503 1.4E-47 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 91 5.4E-19 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 Gene3D G3DSA:2.40.30.20 1 92 3.0E-41 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 SUPERFAMILY SSF50615 10 94 8.11E-30 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS02770 1bdf571cc20c2662843e3b2f1614aaeb 510 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 510 3.2E-249 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 Pfam PF14849 YidC periplasmic domain 77 365 2.1E-90 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 PRINTS PR01900 YidC translocation/secretion protein signature 536 560 2.0E-20 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 PRINTS PR01900 YidC translocation/secretion protein signature 517 532 2.0E-20 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 PRINTS PR01900 YidC translocation/secretion protein signature 363 379 2.0E-20 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 Pfam PF02096 60Kd inner membrane protein 378 581 1.1E-58 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 583 22.816 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 PANTHER PTHR12428 513 586 6.1E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 PANTHER PTHR12428 349 487 6.1E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 PRINTS PR00701 60kDa inner membrane protein signature 439 462 4.4E-10 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 PRINTS PR00701 60kDa inner membrane protein signature 258 273 4.4E-10 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 377 581 1.3E-67 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 376 6.4E-91 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 PANTHER PTHR12428:SF14 513 586 6.1E-71 T 22-04-2016 NHAM_RS18995 5bbaecbd6b66ca2bf68a494ed2535ed4 608 PANTHER PTHR12428:SF14 349 487 6.1E-71 T 22-04-2016 NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 Gene3D G3DSA:3.90.780.10 392 533 1.6E-15 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 Pfam PF02872 5'-nucleotidase, C-terminal domain 407 534 1.3E-13 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 SUPERFAMILY SSF56300 38 59 4.34E-78 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 SUPERFAMILY SSF56300 113 386 4.34E-78 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 Pfam PF00149 Calcineurin-like phosphoesterase 43 313 5.1E-6 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 5 570 4.5E-255 T 22-04-2016 IPR030998 Thiosulfohydrolase SoxB NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 Gene3D G3DSA:3.60.21.10 41 59 4.7E-80 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 Gene3D G3DSA:3.60.21.10 113 386 4.7E-80 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 PANTHER PTHR11575 18 533 1.6E-232 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 SUPERFAMILY SSF55816 390 556 1.96E-27 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 PRINTS PR01607 Apyrase family signature 296 319 2.958501E-12 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 PRINTS PR01607 Apyrase family signature 277 294 2.958501E-12 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 PRINTS PR01607 Apyrase family signature 40 58 2.958501E-12 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 PRINTS PR01607 Apyrase family signature 328 348 2.958501E-12 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 NHAM_RS18830 333cf60a03b19a2c2616ed9316ba4a36 580 PANTHER PTHR11575:SF16 18 533 1.6E-232 T 22-04-2016 NHAM_RS02890 93ba6067921c4911d6552fb0d7a99b4a 208 Gene3D G3DSA:1.10.260.40 6 76 2.2E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS02890 93ba6067921c4911d6552fb0d7a99b4a 208 SUPERFAMILY SSF51306 83 206 2.35E-24 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NHAM_RS02890 93ba6067921c4911d6552fb0d7a99b4a 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 162 174 1.7E-5 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 NHAM_RS02890 93ba6067921c4911d6552fb0d7a99b4a 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 123 133 1.7E-5 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 NHAM_RS02890 93ba6067921c4911d6552fb0d7a99b4a 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 147 158 1.7E-5 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 NHAM_RS02890 93ba6067921c4911d6552fb0d7a99b4a 208 Pfam PF00717 Peptidase S24-like 126 187 4.4E-16 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B NHAM_RS02890 93ba6067921c4911d6552fb0d7a99b4a 208 Gene3D G3DSA:2.10.109.10 119 206 1.9E-22 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 Gene3D G3DSA:3.30.450.20 373 481 2.6E-9 T 22-04-2016 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 Pfam PF08447 PAS fold 271 357 2.1E-7 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 Pfam PF00512 His Kinase A (phospho-acceptor) domain 538 607 1.7E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 Gene3D G3DSA:1.10.287.130 530 603 6.7E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 SUPERFAMILY SSF55874 596 762 3.8E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 SUPERFAMILY SSF55785 361 481 5.93E-10 T 22-04-2016 IPR000014 PAS domain NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 SMART SM00387 652 764 3.5E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 PANTHER PTHR24423 517 762 4.2E-129 T 22-04-2016 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 PANTHER PTHR24423 247 481 4.2E-129 T 22-04-2016 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 748 761 5.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 689 703 5.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 724 742 5.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 SUPERFAMILY SSF47384 522 608 9.81E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 Gene3D G3DSA:3.30.450.20 257 368 9.1E-16 T 22-04-2016 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 Pfam PF12860 PAS fold 382 488 4.0E-15 T 22-04-2016 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 653 762 3.1E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 Gene3D G3DSA:3.30.565.10 607 763 2.8E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 SMART SM00086 322 364 1.3E-5 T 22-04-2016 IPR001610 PAC motif NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 SMART SM00388 538 607 2.1E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 PANTHER PTHR24423:SF480 517 762 4.2E-129 T 22-04-2016 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 PANTHER PTHR24423:SF480 247 481 4.2E-129 T 22-04-2016 NHAM_RS07405 35acdf4d74fd8651ed2346ff51bc442e 775 SUPERFAMILY SSF55785 259 365 6.63E-13 T 22-04-2016 IPR000014 PAS domain NHAM_RS12545 2d2d873c8edea72d1c2d5b2cf6fc894c 425 PIRSF PIRSF001434 1 425 4.0E-125 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS12545 2d2d873c8edea72d1c2d5b2cf6fc894c 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 424 1.3E-136 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS12545 2d2d873c8edea72d1c2d5b2cf6fc894c 425 Gene3D G3DSA:3.90.1150.10 291 424 3.7E-48 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS12545 2d2d873c8edea72d1c2d5b2cf6fc894c 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS12545 2d2d873c8edea72d1c2d5b2cf6fc894c 425 PANTHER PTHR11808 268 424 3.6E-214 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS12545 2d2d873c8edea72d1c2d5b2cf6fc894c 425 PANTHER PTHR11808 1 238 3.6E-214 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS12545 2d2d873c8edea72d1c2d5b2cf6fc894c 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 8 424 5.7E-187 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 NHAM_RS12545 2d2d873c8edea72d1c2d5b2cf6fc894c 425 SUPERFAMILY SSF53383 7 424 8.91E-124 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS12545 2d2d873c8edea72d1c2d5b2cf6fc894c 425 PANTHER PTHR11808:SF12 268 424 3.6E-214 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 NHAM_RS12545 2d2d873c8edea72d1c2d5b2cf6fc894c 425 PANTHER PTHR11808:SF12 1 238 3.6E-214 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 NHAM_RS12545 2d2d873c8edea72d1c2d5b2cf6fc894c 425 Gene3D G3DSA:3.40.640.10 7 289 3.1E-113 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS18270 d5186186a89f84112c9f9ef15bb050f0 240 SUPERFAMILY SSF52402 18 199 1.88E-42 T 22-04-2016 NHAM_RS18270 d5186186a89f84112c9f9ef15bb050f0 240 PANTHER PTHR23293 17 235 2.4E-72 T 22-04-2016 NHAM_RS18270 d5186186a89f84112c9f9ef15bb050f0 240 PANTHER PTHR23293:SF5 17 235 2.4E-72 T 22-04-2016 NHAM_RS18270 d5186186a89f84112c9f9ef15bb050f0 240 PIRSF PIRSF000857 4 240 5.1E-70 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 NHAM_RS18270 d5186186a89f84112c9f9ef15bb050f0 240 Gene3D G3DSA:3.40.50.620 16 208 1.7E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS18270 d5186186a89f84112c9f9ef15bb050f0 240 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 44 211 7.0E-32 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 NHAM_RS18590 6f8acad7f62eca888b8c3b4ec0e24429 262 SMART SM00014 92 213 8.6E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS18590 6f8acad7f62eca888b8c3b4ec0e24429 262 Gene3D G3DSA:1.20.144.10 47 234 8.4E-16 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS18590 6f8acad7f62eca888b8c3b4ec0e24429 262 Pfam PF01569 PAP2 superfamily 91 218 2.9E-20 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS18590 6f8acad7f62eca888b8c3b4ec0e24429 262 SUPERFAMILY SSF48317 7 228 5.45E-23 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NHAM_RS15570 2e8d25cdeb93bcd19e9b934a95d972fd 331 PANTHER PTHR10366:SF466 5 314 3.6E-85 T 22-04-2016 NHAM_RS15570 2e8d25cdeb93bcd19e9b934a95d972fd 331 Gene3D G3DSA:3.40.50.720 2 179 8.2E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15570 2e8d25cdeb93bcd19e9b934a95d972fd 331 Gene3D G3DSA:3.90.25.10 180 321 8.1E-26 T 22-04-2016 NHAM_RS15570 2e8d25cdeb93bcd19e9b934a95d972fd 331 SUPERFAMILY SSF51735 2 315 1.78E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15570 2e8d25cdeb93bcd19e9b934a95d972fd 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 244 3.9E-51 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NHAM_RS15570 2e8d25cdeb93bcd19e9b934a95d972fd 331 PANTHER PTHR10366 5 314 3.6E-85 T 22-04-2016 NHAM_RS23355 ca98d9676ab6ae3fcff973b94f7e863b 232 Pfam PF01138 3' exoribonuclease family, domain 1 49 181 1.6E-23 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 NHAM_RS23355 ca98d9676ab6ae3fcff973b94f7e863b 232 SUPERFAMILY SSF54211 19 213 2.89E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS23355 ca98d9676ab6ae3fcff973b94f7e863b 232 PANTHER PTHR11252:SF0 1 232 2.2E-148 T 22-04-2016 NHAM_RS23355 ca98d9676ab6ae3fcff973b94f7e863b 232 PANTHER PTHR11252 1 232 2.2E-148 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NHAM_RS23355 ca98d9676ab6ae3fcff973b94f7e863b 232 Gene3D G3DSA:1.10.10.400 9 36 1.0E-9 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NHAM_RS23355 ca98d9676ab6ae3fcff973b94f7e863b 232 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 7 45 1.0E-9 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NHAM_RS23355 ca98d9676ab6ae3fcff973b94f7e863b 232 Gene3D G3DSA:3.30.230.70 37 232 1.0E-75 T 22-04-2016 IPR027408 PNPase/RNase PH domain NHAM_RS05770 bf8235489444daf4f444a4b88e105a8e 291 Pfam PF00483 Nucleotidyl transferase 10 266 5.2E-23 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NHAM_RS05770 bf8235489444daf4f444a4b88e105a8e 291 PANTHER PTHR22572:SF14 5 270 8.3E-96 T 22-04-2016 NHAM_RS05770 bf8235489444daf4f444a4b88e105a8e 291 PANTHER PTHR22572 5 270 8.3E-96 T 22-04-2016 NHAM_RS05770 bf8235489444daf4f444a4b88e105a8e 291 Gene3D G3DSA:3.90.550.10 3 273 1.4E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS05770 bf8235489444daf4f444a4b88e105a8e 291 SUPERFAMILY SSF53448 1 275 6.98E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS05770 bf8235489444daf4f444a4b88e105a8e 291 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 266 2.9E-100 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 NHAM_RS19645 3a478a9d8a8c53aa56badf036e290cc6 167 Pfam PF16263 Domain of unknown function (DUF4917) 21 105 5.5E-11 T 22-04-2016 IPR032581 Protein of unknown function DUF4917 NHAM_RS01575 faf73b43bf0da341fa313457bc3b6fba 135 Pfam PF09643 YopX protein 5 135 1.5E-23 T 22-04-2016 IPR019096 YopX protein NHAM_RS01575 faf73b43bf0da341fa313457bc3b6fba 135 Gene3D G3DSA:2.30.30.290 58 135 5.1E-20 T 22-04-2016 IPR023385 YopX-like domain, beta barrel type NHAM_RS01575 faf73b43bf0da341fa313457bc3b6fba 135 SUPERFAMILY SSF159006 2 135 2.62E-32 T 22-04-2016 NHAM_RS01575 faf73b43bf0da341fa313457bc3b6fba 135 TIGRFAM TIGR01671 phage_TIGR01671: phage conserved hypothetical protein TIGR01671 4 134 4.8E-14 T 22-04-2016 IPR010024 Conserved hypothetical protein CHP1671 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 SUPERFAMILY SSF56235 60 485 3.17E-158 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 Pfam PF04898 Glutamate synthase central domain 510 796 2.1E-115 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 SUPERFAMILY SSF69336 1524 1571 4.05E-92 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 SUPERFAMILY SSF69336 1279 1495 4.05E-92 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 PANTHER PTHR11938 49 1495 0.0 T 22-04-2016 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 PANTHER PTHR11938 1524 1575 0.0 T 22-04-2016 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 PANTHER PTHR11938:SF1 49 1495 0.0 T 22-04-2016 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 PANTHER PTHR11938:SF1 1524 1575 0.0 T 22-04-2016 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 Gene3D G3DSA:2.160.20.60 1284 1578 1.2E-106 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 SUPERFAMILY SSF51395 500 1264 2.69E-263 T 22-04-2016 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 Gene3D G3DSA:3.20.20.70 902 1266 3.2E-182 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 Pfam PF00310 Glutamine amidotransferases class-II 60 482 1.9E-185 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 Gene3D G3DSA:3.60.20.10 60 493 1.8E-188 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 Pfam PF01493 GXGXG motif 1311 1496 1.2E-78 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 Gene3D G3DSA:3.20.20.70 498 847 1.8E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS05805 c7e46a80a4012944435d6d7910e52348 1587 Pfam PF01645 Conserved region in glutamate synthase 861 1230 5.9E-156 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 NHAM_RS12235 3009995c71aeb1f498135f553bd5684a 196 SMART SM00738 4 111 1.3E-11 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 NHAM_RS12235 3009995c71aeb1f498135f553bd5684a 196 PANTHER PTHR30265 7 182 3.5E-20 T 22-04-2016 NHAM_RS12235 3009995c71aeb1f498135f553bd5684a 196 SUPERFAMILY SSF50104 141 191 4.93E-5 T 22-04-2016 IPR008991 Translation protein SH3-like domain NHAM_RS12235 3009995c71aeb1f498135f553bd5684a 196 Gene3D G3DSA:3.30.70.940 7 107 1.7E-12 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 NHAM_RS12235 3009995c71aeb1f498135f553bd5684a 196 Pfam PF02357 Transcription termination factor nusG 7 107 3.3E-17 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 NHAM_RS12235 3009995c71aeb1f498135f553bd5684a 196 Gene3D G3DSA:2.30.30.30 141 187 2.5E-7 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 NHAM_RS12235 3009995c71aeb1f498135f553bd5684a 196 SUPERFAMILY SSF82679 7 109 3.66E-17 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 NHAM_RS13865 0c44771d484903ae3bd377a911dbfb02 150 PANTHER PTHR13078 1 149 5.2E-64 T 22-04-2016 NHAM_RS13865 0c44771d484903ae3bd377a911dbfb02 150 SUPERFAMILY SSF54637 1 149 9.27E-43 T 22-04-2016 IPR029069 HotDog domain NHAM_RS13865 0c44771d484903ae3bd377a911dbfb02 150 Gene3D G3DSA:3.10.129.10 2 149 9.2E-45 T 22-04-2016 IPR029069 HotDog domain NHAM_RS13865 0c44771d484903ae3bd377a911dbfb02 150 Pfam PF01575 MaoC like domain 10 123 3.9E-21 T 22-04-2016 IPR002539 MaoC-like domain NHAM_RS15250 35294e8923b510fb4476ac100f17c4e9 496 Pfam PF00884 Sulfatase 49 372 1.6E-51 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NHAM_RS15250 35294e8923b510fb4476ac100f17c4e9 496 PANTHER PTHR10342 13 449 1.8E-89 T 22-04-2016 NHAM_RS15250 35294e8923b510fb4476ac100f17c4e9 496 Gene3D G3DSA:3.40.720.10 48 420 1.2E-85 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NHAM_RS15250 35294e8923b510fb4476ac100f17c4e9 496 ProSitePatterns PS00149 Sulfatases signature 2. 144 154 - T 22-04-2016 IPR024607 Sulfatase, conserved site NHAM_RS15250 35294e8923b510fb4476ac100f17c4e9 496 SUPERFAMILY SSF53649 46 450 4.22E-94 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NHAM_RS04860 37b446fa2ce9de806f6fa1b3af97ba2c 295 PANTHER PTHR11935:SF110 1 282 3.4E-108 T 22-04-2016 NHAM_RS04860 37b446fa2ce9de806f6fa1b3af97ba2c 295 PANTHER PTHR11935 1 282 3.4E-108 T 22-04-2016 NHAM_RS04860 37b446fa2ce9de806f6fa1b3af97ba2c 295 Pfam PF00753 Metallo-beta-lactamase superfamily 24 213 4.2E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS04860 37b446fa2ce9de806f6fa1b3af97ba2c 295 SUPERFAMILY SSF56281 13 261 8.26E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS04860 37b446fa2ce9de806f6fa1b3af97ba2c 295 SMART SM00849 22 213 3.1E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS04860 37b446fa2ce9de806f6fa1b3af97ba2c 295 Gene3D G3DSA:3.60.15.10 16 260 8.9E-50 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS17560 a50b038f4a6097547394cd6b4bf3a255 328 PANTHER PTHR11562:SF17 7 322 9.9E-94 T 22-04-2016 NHAM_RS17560 a50b038f4a6097547394cd6b4bf3a255 328 SUPERFAMILY SSF160240 242 313 7.19E-9 T 22-04-2016 NHAM_RS17560 a50b038f4a6097547394cd6b4bf3a255 328 SUPERFAMILY SSF161111 42 234 2.22E-51 T 22-04-2016 NHAM_RS17560 a50b038f4a6097547394cd6b4bf3a255 328 PANTHER PTHR11562 7 322 9.9E-94 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NHAM_RS17560 a50b038f4a6097547394cd6b4bf3a255 328 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 43 315 9.1E-76 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NHAM_RS17560 a50b038f4a6097547394cd6b4bf3a255 328 Gene3D G3DSA:1.20.1510.10 43 232 3.3E-54 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain NHAM_RS17560 a50b038f4a6097547394cd6b4bf3a255 328 Pfam PF01545 Cation efflux family 47 232 4.0E-39 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NHAM_RS05885 77d14644df73d8fd62bc7c7a82f5c127 111 Gene3D G3DSA:2.30.30.240 8 64 4.0E-13 T 22-04-2016 NHAM_RS05885 77d14644df73d8fd62bc7c7a82f5c127 111 PANTHER PTHR36505:SF1 1 105 1.0E-23 T 22-04-2016 NHAM_RS05885 77d14644df73d8fd62bc7c7a82f5c127 111 SUPERFAMILY SSF50346 3 106 1.55E-21 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS05885 77d14644df73d8fd62bc7c7a82f5c127 111 PANTHER PTHR36505 1 105 1.0E-23 T 22-04-2016 NHAM_RS05885 77d14644df73d8fd62bc7c7a82f5c127 111 Pfam PF05239 PRC-barrel domain 9 64 4.1E-10 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS16805 f0b5f23675086f1ba8370228fdaec587 303 Gene3D G3DSA:3.40.190.10 89 173 1.5E-8 T 22-04-2016 NHAM_RS16805 f0b5f23675086f1ba8370228fdaec587 303 PANTHER PTHR30537:SF5 1 299 1.4E-117 T 22-04-2016 NHAM_RS16805 f0b5f23675086f1ba8370228fdaec587 303 SUPERFAMILY SSF53850 89 296 2.64E-44 T 22-04-2016 NHAM_RS16805 f0b5f23675086f1ba8370228fdaec587 303 PANTHER PTHR30537 1 299 1.4E-117 T 22-04-2016 NHAM_RS16805 f0b5f23675086f1ba8370228fdaec587 303 SUPERFAMILY SSF46785 4 86 2.8E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS16805 f0b5f23675086f1ba8370228fdaec587 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 3.3E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS16805 f0b5f23675086f1ba8370228fdaec587 303 Gene3D G3DSA:1.10.10.10 4 80 3.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS16805 f0b5f23675086f1ba8370228fdaec587 303 Pfam PF03466 LysR substrate binding domain 89 291 2.5E-43 T 22-04-2016 IPR005119 LysR, substrate-binding NHAM_RS16805 f0b5f23675086f1ba8370228fdaec587 303 Gene3D G3DSA:3.40.190.10 174 260 7.1E-23 T 22-04-2016 NHAM_RS16805 f0b5f23675086f1ba8370228fdaec587 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS16805 f0b5f23675086f1ba8370228fdaec587 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS16805 f0b5f23675086f1ba8370228fdaec587 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS16065 ba770dad199f6002347b335600117578 296 Pfam PF02634 FdhD/NarQ family 41 271 1.5E-72 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 NHAM_RS16065 ba770dad199f6002347b335600117578 296 PIRSF PIRSF015626 2 276 4.0E-87 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 NHAM_RS16065 ba770dad199f6002347b335600117578 296 Gene3D G3DSA:3.40.140.10 138 277 1.1E-51 T 22-04-2016 NHAM_RS16065 ba770dad199f6002347b335600117578 296 Gene3D G3DSA:3.10.20.10 42 122 7.7E-16 T 22-04-2016 NHAM_RS16065 ba770dad199f6002347b335600117578 296 SUPERFAMILY SSF53927 22 272 3.61E-73 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 NHAM_RS16065 ba770dad199f6002347b335600117578 296 PANTHER PTHR30592 7 283 6.2E-178 T 22-04-2016 NHAM_RS16065 ba770dad199f6002347b335600117578 296 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 38 271 1.0E-42 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 NHAM_RS16065 ba770dad199f6002347b335600117578 296 PANTHER PTHR30592:SF2 7 283 6.2E-178 T 22-04-2016 NHAM_RS06595 3145d9a7af3c45ca229c2334a12f10b4 601 SUPERFAMILY SSF90123 20 336 5.89E-61 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS06595 3145d9a7af3c45ca229c2334a12f10b4 601 Gene3D G3DSA:3.40.50.300 350 579 7.1E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06595 3145d9a7af3c45ca229c2334a12f10b4 601 SMART SM00382 376 562 2.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS06595 3145d9a7af3c45ca229c2334a12f10b4 601 Pfam PF00664 ABC transporter transmembrane region 37 299 2.2E-38 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS06595 3145d9a7af3c45ca229c2334a12f10b4 601 SUPERFAMILY SSF52540 342 586 1.03E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06595 3145d9a7af3c45ca229c2334a12f10b4 601 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS06595 3145d9a7af3c45ca229c2334a12f10b4 601 Gene3D G3DSA:1.20.1560.10 30 336 2.0E-60 T 22-04-2016 NHAM_RS06595 3145d9a7af3c45ca229c2334a12f10b4 601 PANTHER PTHR24221 19 595 9.2E-208 T 22-04-2016 NHAM_RS06595 3145d9a7af3c45ca229c2334a12f10b4 601 Pfam PF00005 ABC transporter 367 516 1.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS16615 1829cecc202e090c50c24b2decd01b78 210 PANTHER PTHR11228 2 202 7.6E-27 T 22-04-2016 NHAM_RS16615 1829cecc202e090c50c24b2decd01b78 210 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 210 1.4E-107 T 22-04-2016 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 NHAM_RS16615 1829cecc202e090c50c24b2decd01b78 210 Gene3D G3DSA:3.20.20.70 46 130 6.1E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS16615 1829cecc202e090c50c24b2decd01b78 210 Pfam PF13394 4Fe-4S single cluster domain 25 121 6.7E-5 T 22-04-2016 NHAM_RS16615 1829cecc202e090c50c24b2decd01b78 210 PANTHER PTHR11228:SF6 2 202 7.6E-27 T 22-04-2016 NHAM_RS16615 1829cecc202e090c50c24b2decd01b78 210 SUPERFAMILY SSF102114 46 133 5.3E-7 T 22-04-2016 NHAM_RS16615 1829cecc202e090c50c24b2decd01b78 210 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 210 32.74 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 NHAM_RS16615 1829cecc202e090c50c24b2decd01b78 210 PIRSF PIRSF000370 1 210 4.8E-33 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 NHAM_RS09830 4e40d268bd7ac1db4ceb1e7c32557da6 323 Gene3D G3DSA:2.70.150.10 41 78 5.1E-34 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NHAM_RS09830 4e40d268bd7ac1db4ceb1e7c32557da6 323 Gene3D G3DSA:2.70.150.10 131 244 5.1E-34 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NHAM_RS09830 4e40d268bd7ac1db4ceb1e7c32557da6 323 Pfam PF00690 Cation transporter/ATPase, N-terminus 27 93 1.3E-12 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal NHAM_RS09830 4e40d268bd7ac1db4ceb1e7c32557da6 323 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 104 312 8.1E-20 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 NHAM_RS09830 4e40d268bd7ac1db4ceb1e7c32557da6 323 SMART SM00831 25 98 8.8E-16 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal NHAM_RS09830 4e40d268bd7ac1db4ceb1e7c32557da6 323 Gene3D G3DSA:1.20.1110.10 79 130 1.9E-11 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain NHAM_RS09830 4e40d268bd7ac1db4ceb1e7c32557da6 323 SUPERFAMILY SSF81665 26 136 6.54E-37 T 22-04-2016 NHAM_RS09830 4e40d268bd7ac1db4ceb1e7c32557da6 323 SUPERFAMILY SSF81665 244 312 6.54E-37 T 22-04-2016 NHAM_RS09830 4e40d268bd7ac1db4ceb1e7c32557da6 323 PANTHER PTHR24093 42 312 4.5E-63 T 22-04-2016 NHAM_RS09830 4e40d268bd7ac1db4ceb1e7c32557da6 323 Pfam PF00122 E1-E2 ATPase 103 312 1.7E-46 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 NHAM_RS09830 4e40d268bd7ac1db4ceb1e7c32557da6 323 SUPERFAMILY SSF81653 136 242 3.79E-25 T 22-04-2016 NHAM_RS19065 9fb87b22b5336dc15a1400c774cdfb4a 123 Pfam PF11162 Protein of unknown function (DUF2946) 11 120 8.0E-9 T 22-04-2016 IPR021333 Protein of unknown function DUF2946 NHAM_RS03550 f28faf9fb7999a2344d69ae0a92e6dc0 394 PANTHER PTHR11808 1 386 3.5E-169 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS03550 f28faf9fb7999a2344d69ae0a92e6dc0 394 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 6 383 1.4E-171 T 22-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 NHAM_RS03550 f28faf9fb7999a2344d69ae0a92e6dc0 394 PIRSF PIRSF001434 1 385 1.2E-131 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS03550 f28faf9fb7999a2344d69ae0a92e6dc0 394 Gene3D G3DSA:3.90.1150.10 248 383 4.0E-54 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS03550 f28faf9fb7999a2344d69ae0a92e6dc0 394 SUPERFAMILY SSF53383 20 382 7.17E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS03550 f28faf9fb7999a2344d69ae0a92e6dc0 394 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS03550 f28faf9fb7999a2344d69ae0a92e6dc0 394 PANTHER PTHR11808:SF15 1 386 3.5E-169 T 22-04-2016 NHAM_RS03550 f28faf9fb7999a2344d69ae0a92e6dc0 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 381 2.3E-132 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 NHAM_RS03550 f28faf9fb7999a2344d69ae0a92e6dc0 394 Gene3D G3DSA:3.40.640.10 7 247 3.0E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS13945 8ce8bf68706f73d3e204455e2c8a35a5 180 Pfam PF10369 Small subunit of acetolactate synthase 103 176 1.7E-26 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS13945 8ce8bf68706f73d3e204455e2c8a35a5 180 Gene3D G3DSA:3.30.70.260 19 95 1.7E-32 T 22-04-2016 NHAM_RS13945 8ce8bf68706f73d3e204455e2c8a35a5 180 SUPERFAMILY SSF55021 99 178 1.68E-25 T 22-04-2016 NHAM_RS13945 8ce8bf68706f73d3e204455e2c8a35a5 180 Pfam PF01842 ACT domain 20 79 9.1E-12 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 NHAM_RS13945 8ce8bf68706f73d3e204455e2c8a35a5 180 SUPERFAMILY SSF55021 20 94 5.29E-18 T 22-04-2016 NHAM_RS13945 8ce8bf68706f73d3e204455e2c8a35a5 180 Gene3D G3DSA:3.30.70.1150 102 179 4.2E-29 T 22-04-2016 NHAM_RS13945 8ce8bf68706f73d3e204455e2c8a35a5 180 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 19 93 4.0E-37 T 22-04-2016 NHAM_RS13945 8ce8bf68706f73d3e204455e2c8a35a5 180 PANTHER PTHR30239 1 180 1.1E-77 T 22-04-2016 NHAM_RS13945 8ce8bf68706f73d3e204455e2c8a35a5 180 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 19 177 9.0E-54 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS12860 eca4ca62b8dbc6d1ff0476e852eabd81 147 PIRSF PIRSF018267 1 145 9.1E-53 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 NHAM_RS12860 eca4ca62b8dbc6d1ff0476e852eabd81 147 Gene3D G3DSA:3.40.960.10 21 134 1.6E-47 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 NHAM_RS12860 eca4ca62b8dbc6d1ff0476e852eabd81 147 Pfam PF03852 DNA mismatch endonuclease Vsr 3 71 2.1E-28 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 NHAM_RS12860 eca4ca62b8dbc6d1ff0476e852eabd81 147 SUPERFAMILY SSF52980 2 132 4.08E-51 T 22-04-2016 IPR011335 Restriction endonuclease type II-like NHAM_RS12860 eca4ca62b8dbc6d1ff0476e852eabd81 147 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 2 119 6.4E-42 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 NHAM_RS03275 3bd68df108eb57fa9714ac181ac4d7f4 463 SUPERFAMILY SSF103088 347 461 9.03E-35 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS03275 3bd68df108eb57fa9714ac181ac4d7f4 463 PRINTS PR01021 OMPA domain signature 391 406 2.9E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NHAM_RS03275 3bd68df108eb57fa9714ac181ac4d7f4 463 PRINTS PR01021 OMPA domain signature 406 422 2.9E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NHAM_RS03275 3bd68df108eb57fa9714ac181ac4d7f4 463 PRINTS PR01021 OMPA domain signature 361 383 2.9E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NHAM_RS03275 3bd68df108eb57fa9714ac181ac4d7f4 463 PANTHER PTHR30128 322 463 3.2E-41 T 22-04-2016 NHAM_RS03275 3bd68df108eb57fa9714ac181ac4d7f4 463 Pfam PF00691 OmpA family 361 455 2.4E-22 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS03275 3bd68df108eb57fa9714ac181ac4d7f4 463 Gene3D G3DSA:3.30.1330.60 356 461 2.3E-37 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS03275 3bd68df108eb57fa9714ac181ac4d7f4 463 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 406 423 1.2E-9 T 22-04-2016 NHAM_RS03275 3bd68df108eb57fa9714ac181ac4d7f4 463 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 444 463 1.2E-9 T 22-04-2016 NHAM_RS03275 3bd68df108eb57fa9714ac181ac4d7f4 463 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 424 443 1.2E-9 T 22-04-2016 NHAM_RS04100 221ca893991dce5a6aa1898062d0105a 522 Pfam PF01725 Ham1 family 17 212 2.9E-12 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 NHAM_RS04100 221ca893991dce5a6aa1898062d0105a 522 Gene3D G3DSA:3.40.50.300 254 428 7.3E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04100 221ca893991dce5a6aa1898062d0105a 522 Gene3D G3DSA:3.90.950.10 16 217 5.5E-16 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like NHAM_RS04100 221ca893991dce5a6aa1898062d0105a 522 SUPERFAMILY SSF52972 16 217 6.8E-20 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like NHAM_RS04100 221ca893991dce5a6aa1898062d0105a 522 Pfam PF13671 AAA domain 254 396 6.9E-15 T 22-04-2016 NHAM_RS04100 221ca893991dce5a6aa1898062d0105a 522 SUPERFAMILY SSF52540 250 427 1.7E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13155 edfac2307927ba3ce090e9680a96a361 206 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 38 196 2.3E-73 T 22-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted NHAM_RS13155 edfac2307927ba3ce090e9680a96a361 206 PANTHER PTHR39327:SF2 4 206 1.1E-100 T 22-04-2016 NHAM_RS13155 edfac2307927ba3ce090e9680a96a361 206 PANTHER PTHR39327 4 206 1.1E-100 T 22-04-2016 NHAM_RS12575 46709c7cb437078f72c2387df4f09ad8 235 Gene3D G3DSA:3.30.1950.10 90 160 2.4E-16 T 22-04-2016 NHAM_RS12575 46709c7cb437078f72c2387df4f09ad8 235 Gene3D G3DSA:3.10.560.10 162 231 1.7E-10 T 22-04-2016 NHAM_RS12575 46709c7cb437078f72c2387df4f09ad8 235 PANTHER PTHR33619 1 227 5.6E-53 T 22-04-2016 NHAM_RS12575 46709c7cb437078f72c2387df4f09ad8 235 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 156 1.8E-17 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 NHAM_RS12575 46709c7cb437078f72c2387df4f09ad8 235 PANTHER PTHR33619:SF2 1 227 5.6E-53 T 22-04-2016 NHAM_RS12575 46709c7cb437078f72c2387df4f09ad8 235 Pfam PF10531 SLBB domain 163 212 6.4E-9 T 22-04-2016 IPR019554 Soluble ligand binding domain NHAM_RS01700 6f7ad7013f711ec1adbfb0fcf6cd1fb5 163 Pfam PF10964 Protein of unknown function (DUF2766) 52 89 1.4E-4 T 22-04-2016 IPR020262 Uncharacterised protein family YecJ NHAM_RS02265 a6914ece0d17c8f65facd0be1271295a 274 Gene3D G3DSA:3.40.190.10 123 229 6.0E-42 T 22-04-2016 NHAM_RS02265 a6914ece0d17c8f65facd0be1271295a 274 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 47 265 1.2E-61 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 NHAM_RS02265 a6914ece0d17c8f65facd0be1271295a 274 SUPERFAMILY SSF53850 42 266 5.43E-66 T 22-04-2016 NHAM_RS02265 a6914ece0d17c8f65facd0be1271295a 274 Gene3D G3DSA:3.40.190.10 41 122 6.4E-17 T 22-04-2016 NHAM_RS02265 a6914ece0d17c8f65facd0be1271295a 274 Gene3D G3DSA:3.40.190.10 230 266 6.4E-17 T 22-04-2016 NHAM_RS02265 a6914ece0d17c8f65facd0be1271295a 274 PIRSF PIRSF004846 1 269 1.5E-69 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 NHAM_RS02265 a6914ece0d17c8f65facd0be1271295a 274 PANTHER PTHR30632 30 273 3.0E-66 T 22-04-2016 NHAM_RS02265 a6914ece0d17c8f65facd0be1271295a 274 PANTHER PTHR30632:SF0 30 273 3.0E-66 T 22-04-2016 NHAM_RS02265 a6914ece0d17c8f65facd0be1271295a 274 Pfam PF13531 Bacterial extracellular solute-binding protein 42 266 5.5E-49 T 22-04-2016 NHAM_RS11875 54b35783174e20c2c97c8abb8a629867 366 Gene3D G3DSA:3.30.420.40 1 201 9.0E-65 T 22-04-2016 NHAM_RS11875 54b35783174e20c2c97c8abb8a629867 366 SUPERFAMILY SSF53067 2 34 2.59E-17 T 22-04-2016 NHAM_RS11875 54b35783174e20c2c97c8abb8a629867 366 SUPERFAMILY SSF53067 146 323 2.59E-17 T 22-04-2016 NHAM_RS11875 54b35783174e20c2c97c8abb8a629867 366 SUPERFAMILY SSF53067 71 116 2.59E-17 T 22-04-2016 NHAM_RS11875 54b35783174e20c2c97c8abb8a629867 366 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 366 36.087 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 NHAM_RS11875 54b35783174e20c2c97c8abb8a629867 366 PANTHER PTHR30605 1 366 1.3E-135 T 22-04-2016 NHAM_RS11875 54b35783174e20c2c97c8abb8a629867 366 Pfam PF03702 Uncharacterised protein family (UPF0075) 4 363 1.5E-83 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 NHAM_RS18960 c4d0d0c68f0d0551d96fc5b1d88ece60 186 Gene3D G3DSA:3.40.50.1580 15 171 1.6E-28 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NHAM_RS18960 c4d0d0c68f0d0551d96fc5b1d88ece60 186 SUPERFAMILY SSF53167 8 171 9.95E-28 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NHAM_RS18960 c4d0d0c68f0d0551d96fc5b1d88ece60 186 Pfam PF01048 Phosphorylase superfamily 24 168 2.8E-15 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NHAM_RS00650 d9cd87ae53acf17fb514bad0c8be1558 302 Gene3D G3DSA:3.40.50.300 1 180 1.9E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00650 d9cd87ae53acf17fb514bad0c8be1558 302 PANTHER PTHR32039 1 294 6.8E-142 T 22-04-2016 NHAM_RS00650 d9cd87ae53acf17fb514bad0c8be1558 302 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 194 292 1.5E-30 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain NHAM_RS00650 d9cd87ae53acf17fb514bad0c8be1558 302 SMART SM00382 1 183 3.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS00650 d9cd87ae53acf17fb514bad0c8be1558 302 SUPERFAMILY SSF52540 1 292 6.54E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00650 d9cd87ae53acf17fb514bad0c8be1558 302 Pfam PF01078 Magnesium chelatase, subunit ChlI 1 186 1.1E-82 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain NHAM_RS00650 d9cd87ae53acf17fb514bad0c8be1558 302 PANTHER PTHR32039:SF7 1 294 6.8E-142 T 22-04-2016 IPR004482 Mg chelatase-related protein NHAM_RS09695 b93738add94473e6c8356b1d35407edf 532 SUPERFAMILY SSF56281 2 452 3.82E-113 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS09695 b93738add94473e6c8356b1d35407edf 532 PANTHER PTHR11203:SF11 1 470 4.1E-115 T 22-04-2016 NHAM_RS09695 b93738add94473e6c8356b1d35407edf 532 Gene3D G3DSA:3.60.15.10 4 102 7.3E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS09695 b93738add94473e6c8356b1d35407edf 532 Gene3D G3DSA:3.60.15.10 138 271 7.3E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS09695 b93738add94473e6c8356b1d35407edf 532 SMART SM01027 260 380 2.2E-52 T 22-04-2016 IPR022712 Beta-Casp domain NHAM_RS09695 b93738add94473e6c8356b1d35407edf 532 PANTHER PTHR11203 1 470 4.1E-115 T 22-04-2016 NHAM_RS09695 b93738add94473e6c8356b1d35407edf 532 Pfam PF10996 Beta-Casp domain 260 379 6.1E-27 T 22-04-2016 IPR022712 Beta-Casp domain NHAM_RS09695 b93738add94473e6c8356b1d35407edf 532 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 394 448 1.8E-13 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain NHAM_RS09695 b93738add94473e6c8356b1d35407edf 532 SMART SM00849 15 247 1.8E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS09695 b93738add94473e6c8356b1d35407edf 532 Pfam PF00753 Metallo-beta-lactamase superfamily 15 78 9.4E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS06660 45ab55b1e10d458e8bf752e3ed459285 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 23 377 3.3E-103 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NHAM_RS06660 45ab55b1e10d458e8bf752e3ed459285 382 SUPERFAMILY SSF53383 22 380 2.53E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS06660 45ab55b1e10d458e8bf752e3ed459285 382 PANTHER PTHR30244:SF12 7 382 5.4E-167 T 22-04-2016 NHAM_RS06660 45ab55b1e10d458e8bf752e3ed459285 382 Gene3D G3DSA:3.40.640.10 21 258 2.0E-76 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS06660 45ab55b1e10d458e8bf752e3ed459285 382 PANTHER PTHR30244 7 382 5.4E-167 T 22-04-2016 NHAM_RS06660 45ab55b1e10d458e8bf752e3ed459285 382 Gene3D G3DSA:3.90.1150.10 262 380 1.2E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS06660 45ab55b1e10d458e8bf752e3ed459285 382 PIRSF PIRSF000390 5 382 1.2E-90 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NHAM_RS06870 0ee3fa20cb61cccf433d0da5eca95fd1 137 Pfam PF10768 Class II flagellar assembly regulator 1 134 1.3E-45 T 22-04-2016 IPR019704 Flagellar assembly regulator FliX, class II NHAM_RS18465 d6abfe35d8f65be250f2f94f95f9883a 499 SUPERFAMILY SSF56954 21 483 4.71E-101 T 22-04-2016 NHAM_RS18465 d6abfe35d8f65be250f2f94f95f9883a 499 Pfam PF02321 Outer membrane efflux protein 82 270 4.2E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NHAM_RS18465 d6abfe35d8f65be250f2f94f95f9883a 499 Pfam PF02321 Outer membrane efflux protein 301 479 1.8E-19 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NHAM_RS18465 d6abfe35d8f65be250f2f94f95f9883a 499 Gene3D G3DSA:1.20.1600.10 66 483 4.9E-102 T 22-04-2016 NHAM_RS18465 d6abfe35d8f65be250f2f94f95f9883a 499 PANTHER PTHR30203:SF10 7 499 2.1E-166 T 22-04-2016 NHAM_RS18465 d6abfe35d8f65be250f2f94f95f9883a 499 PANTHER PTHR30203 7 499 2.1E-166 T 22-04-2016 NHAM_RS18465 d6abfe35d8f65be250f2f94f95f9883a 499 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 29 481 1.1E-99 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 643 52.615 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 Gene3D G3DSA:3.40.50.980 265 424 1.4E-27 T 22-04-2016 NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 641 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 Gene3D G3DSA:3.40.50.980 78 264 7.3E-42 T 22-04-2016 NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 22-04-2016 IPR020845 AMP-binding, conserved site NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 PANTHER PTHR24095 9 648 0.0 T 22-04-2016 NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 PANTHER PTHR24095:SF178 9 648 0.0 T 22-04-2016 NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 529 607 2.4E-24 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 Gene3D G3DSA:2.30.38.10 437 513 5.6E-7 T 22-04-2016 NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 Pfam PF00501 AMP-binding enzyme 83 520 4.4E-90 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 Gene3D G3DSA:3.30.300.30 516 629 5.9E-27 T 22-04-2016 NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 SUPERFAMILY SSF56801 7 638 1.96E-179 T 22-04-2016 NHAM_RS02895 5b4e5c799ac46a15f249ef04dbbf8a0a 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 80 8.5E-22 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 NHAM_RS02625 34bd3db20bf648020e6093965adfa997 194 Pfam PF02559 CarD-like/TRCF domain 7 114 1.3E-14 T 22-04-2016 IPR003711 CarD-like/TRCF domain NHAM_RS02625 34bd3db20bf648020e6093965adfa997 194 SMART SM01058 6 116 1.7E-35 T 22-04-2016 IPR003711 CarD-like/TRCF domain NHAM_RS02625 34bd3db20bf648020e6093965adfa997 194 SUPERFAMILY SSF141259 4 72 2.35E-15 T 22-04-2016 IPR003711 CarD-like/TRCF domain NHAM_RS02625 34bd3db20bf648020e6093965adfa997 194 PANTHER PTHR38447 7 194 7.7E-62 T 22-04-2016 NHAM_RS01360 65e0acded148adf61ef2e97cd64e0bd5 127 PIRSF PIRSF032126 5 127 1.0E-36 T 22-04-2016 IPR016989 ATP synthase protein I, alphaproteobacterial NHAM_RS01360 65e0acded148adf61ef2e97cd64e0bd5 127 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 64 116 8.6E-17 T 22-04-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter NHAM_RS08990 dde5ddf6885f8a28a081598d588468d0 481 Pfam PF05036 Sporulation related domain 399 479 1.8E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 NHAM_RS08990 dde5ddf6885f8a28a081598d588468d0 481 SUPERFAMILY SSF110997 399 478 7.85E-9 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 NHAM_RS08990 dde5ddf6885f8a28a081598d588468d0 481 Gene3D G3DSA:3.30.70.1070 395 478 4.6E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 NHAM_RS18715 a83c4fee7e04c341d083f203b7edae81 315 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 284 4.7E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NHAM_RS18715 a83c4fee7e04c341d083f203b7edae81 315 PANTHER PTHR30482 1 300 6.4E-69 T 22-04-2016 NHAM_RS18715 a83c4fee7e04c341d083f203b7edae81 315 PANTHER PTHR30482:SF1 1 300 6.4E-69 T 22-04-2016 NHAM_RS13365 81827a9c73cd8f4a1d5c39b874852475 461 PANTHER PTHR30482 71 170 6.0E-158 T 22-04-2016 NHAM_RS13365 81827a9c73cd8f4a1d5c39b874852475 461 PANTHER PTHR30482 188 460 6.0E-158 T 22-04-2016 NHAM_RS13365 81827a9c73cd8f4a1d5c39b874852475 461 Pfam PF11862 Domain of unknown function (DUF3382) 21 114 5.6E-18 T 22-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal NHAM_RS13365 81827a9c73cd8f4a1d5c39b874852475 461 PANTHER PTHR30482:SF9 71 170 6.0E-158 T 22-04-2016 NHAM_RS13365 81827a9c73cd8f4a1d5c39b874852475 461 PANTHER PTHR30482:SF9 188 460 6.0E-158 T 22-04-2016 NHAM_RS13365 81827a9c73cd8f4a1d5c39b874852475 461 Pfam PF02653 Branched-chain amino acid transport system / permease component 127 428 2.8E-46 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NHAM_RS01010 cf031930ec5e03139817a271402c904d 543 SUPERFAMILY SSF52374 19 337 8.85E-55 T 22-04-2016 NHAM_RS01010 cf031930ec5e03139817a271402c904d 543 SUPERFAMILY SSF48163 336 539 9.16E-42 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NHAM_RS01010 cf031930ec5e03139817a271402c904d 543 Gene3D G3DSA:1.10.10.350 433 539 5.5E-32 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NHAM_RS01010 cf031930ec5e03139817a271402c904d 543 Gene3D G3DSA:3.40.50.620 284 326 1.1E-4 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS01010 cf031930ec5e03139817a271402c904d 543 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 18 539 29.998 T 22-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 NHAM_RS01010 cf031930ec5e03139817a271402c904d 543 PANTHER PTHR37940 9 543 3.7E-176 T 22-04-2016 NHAM_RS01010 cf031930ec5e03139817a271402c904d 543 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 29 533 1.4E-51 T 22-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 NHAM_RS01010 cf031930ec5e03139817a271402c904d 543 Pfam PF01921 tRNA synthetases class I (K) 19 372 5.5E-132 T 22-04-2016 NHAM_RS01010 cf031930ec5e03139817a271402c904d 543 Gene3D G3DSA:3.40.50.620 20 200 2.8E-41 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS01010 cf031930ec5e03139817a271402c904d 543 Gene3D G3DSA:3.40.50.620 238 283 2.8E-41 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS01010 cf031930ec5e03139817a271402c904d 543 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 57 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 PRINTS PR00381 Kinesin light chain signature 89 106 4.4E-16 T 22-04-2016 IPR002151 Kinesin light chain GO:0003777|GO:0005871 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 PRINTS PR00381 Kinesin light chain signature 133 153 4.4E-16 T 22-04-2016 IPR002151 Kinesin light chain GO:0003777|GO:0005871 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 PRINTS PR00381 Kinesin light chain signature 24 42 4.4E-16 T 22-04-2016 IPR002151 Kinesin light chain GO:0003777|GO:0005871 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 PRINTS PR00381 Kinesin light chain signature 168 189 4.4E-16 T 22-04-2016 IPR002151 Kinesin light chain GO:0003777|GO:0005871 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 Gene3D G3DSA:1.25.40.10 15 187 2.0E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 SMART SM00028 51 84 19.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 SMART SM00028 93 126 0.082 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 SMART SM00028 9 42 1.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 SMART SM00028 135 168 0.0024 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 SUPERFAMILY SSF48452 9 123 1.59E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 PANTHER PTHR19959 12 188 1.7E-68 T 22-04-2016 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 Pfam PF13424 Tetratricopeptide repeat 9 81 7.1E-19 T 22-04-2016 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 Pfam PF13424 Tetratricopeptide repeat 93 167 4.2E-23 T 22-04-2016 NHAM_RS16625 f021882cbb59e37df640b5cfcfe49d40 189 SUPERFAMILY SSF48452 88 188 1.75E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS20400 3b54d7a79e32957eca6b2448319533d2 301 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 17 279 8.3E-26 T 22-04-2016 IPR017039 Virulence factor BrkB NHAM_RS20400 3b54d7a79e32957eca6b2448319533d2 301 PANTHER PTHR30213 17 284 3.4E-26 T 22-04-2016 NHAM_RS20400 3b54d7a79e32957eca6b2448319533d2 301 PIRSF PIRSF035875 3 300 1.3E-37 T 22-04-2016 IPR017039 Virulence factor BrkB NHAM_RS20400 3b54d7a79e32957eca6b2448319533d2 301 Pfam PF03631 Virulence factor BrkB 29 283 2.7E-37 T 22-04-2016 IPR017039 Virulence factor BrkB NHAM_RS19120 b781bdd217d6e38eb8e8bbff07e06ee5 299 Pfam PF01497 Periplasmic binding protein 49 262 1.8E-24 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 NHAM_RS19120 b781bdd217d6e38eb8e8bbff07e06ee5 299 Gene3D G3DSA:3.40.50.1980 171 294 4.0E-8 T 22-04-2016 NHAM_RS19120 b781bdd217d6e38eb8e8bbff07e06ee5 299 SUPERFAMILY SSF53807 44 294 1.57E-39 T 22-04-2016 NHAM_RS19120 b781bdd217d6e38eb8e8bbff07e06ee5 299 PANTHER PTHR30535 43 294 3.1E-18 T 22-04-2016 NHAM_RS19120 b781bdd217d6e38eb8e8bbff07e06ee5 299 Gene3D G3DSA:3.40.50.1980 46 166 1.3E-14 T 22-04-2016 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 PIRSF PIRSF002162 1 177 3.5E-45 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 SUPERFAMILY SSF56053 83 177 7.19E-37 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 Pfam PF00347 Ribosomal protein L6 90 164 1.6E-21 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 Pfam PF00347 Ribosomal protein L6 11 82 3.0E-16 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 PANTHER PTHR11655:SF14 1 176 1.2E-83 T 22-04-2016 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 4.0E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 4.0E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 4.0E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 Gene3D G3DSA:3.90.930.12 2 82 5.4E-28 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 SUPERFAMILY SSF56053 1 82 4.86E-23 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.4E-74 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 Gene3D G3DSA:3.90.930.12 83 177 1.3E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.236 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS07985 eea8012fbf0928867fd62933a1a8d0d5 177 PANTHER PTHR11655 1 176 1.2E-83 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS23535 f0862332ee5e7e29ea169f14b26657fd 302 SUPERFAMILY SSF53686 2 302 3.93E-108 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS23535 f0862332ee5e7e29ea169f14b26657fd 302 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 53 263 1.6E-35 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS23535 f0862332ee5e7e29ea169f14b26657fd 302 Gene3D G3DSA:3.40.50.1100 2 19 1.4E-79 T 22-04-2016 NHAM_RS23535 f0862332ee5e7e29ea169f14b26657fd 302 Gene3D G3DSA:3.40.50.1100 64 192 1.4E-79 T 22-04-2016 NHAM_RS23535 f0862332ee5e7e29ea169f14b26657fd 302 Gene3D G3DSA:3.40.50.1100 193 256 4.0E-5 T 22-04-2016 NHAM_RS23535 f0862332ee5e7e29ea169f14b26657fd 302 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 74 88 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS23535 f0862332ee5e7e29ea169f14b26657fd 302 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 2 302 1.6E-141 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS23535 f0862332ee5e7e29ea169f14b26657fd 302 PANTHER PTHR10314 1 302 5.7E-172 T 22-04-2016 NHAM_RS23535 f0862332ee5e7e29ea169f14b26657fd 302 PANTHER PTHR10314:SF3 1 302 5.7E-172 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS13615 34a081157243883c85510a446f6170e2 202 Gene3D G3DSA:1.10.443.10 24 178 4.5E-30 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS13615 34a081157243883c85510a446f6170e2 202 Pfam PF00589 Phage integrase family 36 174 1.2E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS13615 34a081157243883c85510a446f6170e2 202 SUPERFAMILY SSF56349 14 178 1.47E-30 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS13615 34a081157243883c85510a446f6170e2 202 PANTHER PTHR30349:SF20 32 202 4.4E-21 T 22-04-2016 NHAM_RS13615 34a081157243883c85510a446f6170e2 202 PANTHER PTHR30349 32 202 4.4E-21 T 22-04-2016 NHAM_RS06170 12c9c07f3ffb477be7ea34792810b55d 299 PANTHER PTHR30406 5 290 8.1E-63 T 22-04-2016 NHAM_RS06170 12c9c07f3ffb477be7ea34792810b55d 299 PANTHER PTHR30406:SF2 5 290 8.1E-63 T 22-04-2016 NHAM_RS06170 12c9c07f3ffb477be7ea34792810b55d 299 Gene3D G3DSA:1.10.3720.10 10 289 1.2E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS06170 12c9c07f3ffb477be7ea34792810b55d 299 SUPERFAMILY SSF161098 57 286 5.23E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS06170 12c9c07f3ffb477be7ea34792810b55d 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 286 1.3E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 SUPERFAMILY SSF55021 678 751 4.2E-11 T 22-04-2016 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 PANTHER PTHR21262:SF0 1 753 0.0 T 22-04-2016 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 SUPERFAMILY SSF81271 404 476 9.59E-19 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 52 748 5.8E-194 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 Gene3D G3DSA:3.30.460.10 219 350 1.7E-42 T 22-04-2016 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 Gene3D G3DSA:3.10.20.30 416 477 6.7E-18 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 Pfam PF02824 TGS domain 418 476 1.3E-15 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 SUPERFAMILY SSF81301 207 421 8.66E-57 T 22-04-2016 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 SUPERFAMILY SSF109604 31 216 7.22E-69 T 22-04-2016 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 SMART SM00954 261 371 3.2E-54 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 PANTHER PTHR21262 1 753 0.0 T 22-04-2016 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 Pfam PF13291 ACT domain 674 750 1.0E-18 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 Pfam PF13328 HD domain 52 201 1.5E-49 T 22-04-2016 IPR003607 HD/PDEase domain NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 Pfam PF04607 Region found in RelA / SpoT proteins 261 370 2.7E-32 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 SMART SM00471 67 179 1.1E-11 T 22-04-2016 IPR003607 HD/PDEase domain NHAM_RS11490 960735d4c2f6bccbe3fb2c69fdb34408 753 Gene3D G3DSA:3.30.70.260 675 741 3.6E-12 T 22-04-2016 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 SUPERFAMILY SSF56024 336 515 5.97E-55 T 22-04-2016 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 PANTHER PTHR30218:SF0 1 730 0.0 T 22-04-2016 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 SUPERFAMILY SSF143724 131 332 8.24E-58 T 22-04-2016 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 Pfam PF13090 Polyphosphate kinase C-terminal domain 350 703 6.8E-152 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 28 705 3.6E-286 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 SUPERFAMILY SSF56024 520 704 1.32E-67 T 22-04-2016 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 PANTHER PTHR30218 1 730 0.0 T 22-04-2016 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 Pfam PF02503 Polyphosphate kinase middle domain 143 340 5.1E-53 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 Gene3D G3DSA:3.30.870.10 520 704 2.9E-71 T 22-04-2016 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 SUPERFAMILY SSF140356 26 125 4.19E-36 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 Gene3D G3DSA:3.30.1840.10 130 319 3.2E-55 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 Gene3D G3DSA:3.30.870.10 337 519 5.1E-76 T 22-04-2016 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 PIRSF PIRSF015589 7 722 5.6E-263 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 Hamap MF_00347 Polyphosphate kinase [ppk]. 26 707 31.198 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 NHAM_RS10755 5c4ef8eed8e06f01621558975b34a477 733 Pfam PF13089 Polyphosphate kinase N-terminal domain 29 133 3.1E-35 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 NHAM_RS00580 8e1d6085f02fbef078a92e722a0b07d6 159 PANTHER PTHR36918 1 153 1.2E-67 T 22-04-2016 NHAM_RS00580 8e1d6085f02fbef078a92e722a0b07d6 159 Gene3D G3DSA:3.10.420.10 11 157 1.5E-60 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NHAM_RS00580 8e1d6085f02fbef078a92e722a0b07d6 159 Hamap MF_00821 Protein-export protein SecB [secB]. 1 152 31.558 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NHAM_RS00580 8e1d6085f02fbef078a92e722a0b07d6 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 130 148 5.3E-27 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NHAM_RS00580 8e1d6085f02fbef078a92e722a0b07d6 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 104 126 5.3E-27 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NHAM_RS00580 8e1d6085f02fbef078a92e722a0b07d6 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 19 36 5.3E-27 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NHAM_RS00580 8e1d6085f02fbef078a92e722a0b07d6 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 80 100 5.3E-27 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NHAM_RS00580 8e1d6085f02fbef078a92e722a0b07d6 159 SUPERFAMILY SSF54611 7 148 9.81E-50 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NHAM_RS00580 8e1d6085f02fbef078a92e722a0b07d6 159 PANTHER PTHR36918:SF1 1 153 1.2E-67 T 22-04-2016 NHAM_RS00580 8e1d6085f02fbef078a92e722a0b07d6 159 Pfam PF02556 Preprotein translocase subunit SecB 13 150 5.7E-54 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NHAM_RS00580 8e1d6085f02fbef078a92e722a0b07d6 159 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 15 147 8.7E-42 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NHAM_RS16380 c63e9452f02c0eb76c6694a714ee1417 98 SMART SM00883 5 97 4.0E-59 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS16380 c63e9452f02c0eb76c6694a714ee1417 98 ProSitePatterns PS00681 Chaperonins cpn10 signature. 6 30 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 NHAM_RS16380 c63e9452f02c0eb76c6694a714ee1417 98 SUPERFAMILY SSF50129 4 97 8.19E-36 T 22-04-2016 IPR011032 GroES-like NHAM_RS16380 c63e9452f02c0eb76c6694a714ee1417 98 Hamap MF_00580 10 kDa chaperonin [groS]. 5 98 27.151 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS16380 c63e9452f02c0eb76c6694a714ee1417 98 PRINTS PR00297 10kDa chaperonin signature 63 75 2.2E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS16380 c63e9452f02c0eb76c6694a714ee1417 98 PRINTS PR00297 10kDa chaperonin signature 84 97 2.2E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS16380 c63e9452f02c0eb76c6694a714ee1417 98 PRINTS PR00297 10kDa chaperonin signature 28 49 2.2E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS16380 c63e9452f02c0eb76c6694a714ee1417 98 PRINTS PR00297 10kDa chaperonin signature 6 21 2.2E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS16380 c63e9452f02c0eb76c6694a714ee1417 98 PANTHER PTHR10772 4 98 1.1E-47 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS16380 c63e9452f02c0eb76c6694a714ee1417 98 Pfam PF00166 Chaperonin 10 Kd subunit 5 96 1.8E-36 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS16380 c63e9452f02c0eb76c6694a714ee1417 98 Gene3D G3DSA:2.30.33.40 5 97 1.3E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NHAM_RS03960 ac42ec7333831865ae4628b18e8bb53c 213 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 21 213 5.0E-66 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NHAM_RS03960 ac42ec7333831865ae4628b18e8bb53c 213 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 213 8.1E-16 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NHAM_RS03960 ac42ec7333831865ae4628b18e8bb53c 213 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 34 118 4.9E-25 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NHAM_RS03960 ac42ec7333831865ae4628b18e8bb53c 213 PANTHER PTHR10851:SF0 22 213 1.7E-85 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NHAM_RS03960 ac42ec7333831865ae4628b18e8bb53c 213 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 12 213 37.659 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NHAM_RS03960 ac42ec7333831865ae4628b18e8bb53c 213 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NHAM_RS03960 ac42ec7333831865ae4628b18e8bb53c 213 SUPERFAMILY SSF50475 22 213 1.22E-63 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NHAM_RS03960 ac42ec7333831865ae4628b18e8bb53c 213 PANTHER PTHR10851 22 213 1.7E-85 T 22-04-2016 NHAM_RS03960 ac42ec7333831865ae4628b18e8bb53c 213 PIRSF PIRSF000190 2 213 9.1E-72 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NHAM_RS03960 ac42ec7333831865ae4628b18e8bb53c 213 Gene3D G3DSA:2.30.110.10 21 213 7.2E-76 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NHAM_RS00445 9b4116ba67f40bc1f922cc396985d21d 423 Gene3D G3DSA:3.90.1150.10 287 422 6.3E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS00445 9b4116ba67f40bc1f922cc396985d21d 423 PANTHER PTHR11751:SF354 41 420 1.1E-124 T 22-04-2016 NHAM_RS00445 9b4116ba67f40bc1f922cc396985d21d 423 PANTHER PTHR11751 41 420 1.1E-124 T 22-04-2016 NHAM_RS00445 9b4116ba67f40bc1f922cc396985d21d 423 Pfam PF00155 Aminotransferase class I and II 59 418 5.8E-41 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NHAM_RS00445 9b4116ba67f40bc1f922cc396985d21d 423 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 267 280 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 NHAM_RS00445 9b4116ba67f40bc1f922cc396985d21d 423 SUPERFAMILY SSF53383 46 421 9.6E-82 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS00445 9b4116ba67f40bc1f922cc396985d21d 423 Gene3D G3DSA:3.40.640.10 70 286 8.3E-53 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS16120 b10665a3243a65df68c7dd70badbd90e 155 PANTHER PTHR23404 7 152 3.2E-33 T 22-04-2016 NHAM_RS16120 b10665a3243a65df68c7dd70badbd90e 155 Pfam PF02391 MoaE protein 9 123 1.1E-32 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16120 b10665a3243a65df68c7dd70badbd90e 155 Gene3D G3DSA:3.90.1170.40 5 152 9.8E-50 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16120 b10665a3243a65df68c7dd70badbd90e 155 SUPERFAMILY SSF54690 6 152 3.66E-48 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS16120 b10665a3243a65df68c7dd70badbd90e 155 PANTHER PTHR23404:SF2 7 152 3.2E-33 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS08465 a1676a0c80787af70ec2a6e5ab7b4214 234 SUPERFAMILY SSF55620 42 232 1.85E-73 T 22-04-2016 NHAM_RS08465 a1676a0c80787af70ec2a6e5ab7b4214 234 Pfam PF01227 GTP cyclohydrolase I 54 231 1.0E-72 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 NHAM_RS08465 a1676a0c80787af70ec2a6e5ab7b4214 234 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 111 127 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 NHAM_RS08465 a1676a0c80787af70ec2a6e5ab7b4214 234 Gene3D G3DSA:1.10.286.10 48 100 3.0E-23 T 22-04-2016 NHAM_RS08465 a1676a0c80787af70ec2a6e5ab7b4214 234 Gene3D G3DSA:3.30.1130.10 106 232 2.5E-55 T 22-04-2016 NHAM_RS08465 a1676a0c80787af70ec2a6e5ab7b4214 234 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 49 232 38.541 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 NHAM_RS08465 a1676a0c80787af70ec2a6e5ab7b4214 234 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 56 232 1.7E-64 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 NHAM_RS08465 a1676a0c80787af70ec2a6e5ab7b4214 234 PANTHER PTHR11109 52 232 2.0E-94 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 NHAM_RS14660 f1d110968e34c0483360a5263899608b 357 PANTHER PTHR11079 16 353 2.4E-115 T 22-04-2016 NHAM_RS14660 f1d110968e34c0483360a5263899608b 357 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 164 178 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS14660 f1d110968e34c0483360a5263899608b 357 SUPERFAMILY SSF55120 105 350 7.81E-68 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS14660 f1d110968e34c0483360a5263899608b 357 Gene3D G3DSA:3.10.290.10 29 133 1.1E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS14660 f1d110968e34c0483360a5263899608b 357 PANTHER PTHR11079:SF73 16 353 2.4E-115 T 22-04-2016 NHAM_RS14660 f1d110968e34c0483360a5263899608b 357 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 27 351 1.3E-81 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS14660 f1d110968e34c0483360a5263899608b 357 Pfam PF00849 RNA pseudouridylate synthase 117 282 1.7E-28 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS14660 f1d110968e34c0483360a5263899608b 357 SUPERFAMILY SSF55174 28 130 2.19E-5 T 22-04-2016 NHAM_RS12170 297e499cfc6c2d1c9dd3aeb3338fd09e 142 Pfam PF04717 Type VI secretion system, phage-baseplate injector 16 110 1.7E-16 T 22-04-2016 IPR006531 Gp5 N-terminal NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.4E-173 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 SUPERFAMILY SSF52540 42 354 4.96E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 Pfam PF02978 Signal peptide binding domain 327 427 5.3E-29 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 8.2E-21 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 SMART SM00382 99 246 2.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 445 32.155 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 Pfam PF00448 SRP54-type protein, GTPase domain 102 296 7.7E-67 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 PANTHER PTHR11564 1 434 6.2E-229 T 22-04-2016 NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 SUPERFAMILY SSF47446 327 428 7.68E-34 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 Gene3D G3DSA:1.20.120.140 2 88 9.2E-33 T 22-04-2016 NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 SMART SM00963 1 86 2.9E-32 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 SMART SM00962 100 296 7.7E-101 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 Gene3D G3DSA:3.40.50.300 99 297 9.4E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 PANTHER PTHR11564:SF7 1 434 6.2E-229 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 NHAM_RS18355 c11781f0378ebd06c6bf196e04140481 511 Gene3D G3DSA:1.10.260.30 327 431 2.3E-34 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 NHAM_RS18360 4738cf477d34468ed5493250459be9b3 110 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 23.34 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18360 4738cf477d34468ed5493250459be9b3 110 SUPERFAMILY SSF54565 3 86 2.62E-30 T 22-04-2016 IPR023803 Ribosomal protein S16 domain NHAM_RS18360 4738cf477d34468ed5493250459be9b3 110 Pfam PF00886 Ribosomal protein S16 9 70 2.2E-25 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18360 4738cf477d34468ed5493250459be9b3 110 Gene3D G3DSA:3.30.1320.10 3 85 1.0E-31 T 22-04-2016 IPR023803 Ribosomal protein S16 domain NHAM_RS18360 4738cf477d34468ed5493250459be9b3 110 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 1.4E-29 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18360 4738cf477d34468ed5493250459be9b3 110 PANTHER PTHR12919 2 109 8.2E-38 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS24155 15f9b6ca12bec194cb0f060e2beb04d5 241 Pfam PF01464 Transglycosylase SLT domain 26 135 2.2E-5 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 NHAM_RS24155 15f9b6ca12bec194cb0f060e2beb04d5 241 Gene3D G3DSA:1.10.530.10 28 132 7.4E-7 T 22-04-2016 NHAM_RS24155 15f9b6ca12bec194cb0f060e2beb04d5 241 SUPERFAMILY SSF53955 30 132 3.8E-5 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 12 219 2.7E-72 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 PRINTS PR00151 Porphobilinogen deaminase signature 83 102 2.4E-40 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 PRINTS PR00151 Porphobilinogen deaminase signature 52 72 2.4E-40 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 PRINTS PR00151 Porphobilinogen deaminase signature 150 167 2.4E-40 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 PRINTS PR00151 Porphobilinogen deaminase signature 237 254 2.4E-40 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 PRINTS PR00151 Porphobilinogen deaminase signature 131 148 2.4E-40 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 PANTHER PTHR11557 13 310 5.0E-139 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 10 304 36.507 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 Gene3D G3DSA:3.30.160.40 228 309 1.1E-22 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 236 302 1.2E-14 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 12 304 2.8E-104 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 Gene3D G3DSA:3.40.190.10 12 117 2.5E-41 T 22-04-2016 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 238 254 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 Gene3D G3DSA:3.40.190.10 118 206 1.2E-36 T 22-04-2016 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 SUPERFAMILY SSF53850 11 225 2.17E-75 T 22-04-2016 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 PIRSF PIRSF001438 2 315 6.1E-114 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS02915 138d673db65b1d9b6786c715b302e01c 316 SUPERFAMILY SSF54782 228 310 1.24E-22 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS15920 7371b5077d8d1c7ec266e0398de51c0b 233 PANTHER PTHR33284:SF1 6 212 2.1E-68 T 22-04-2016 NHAM_RS15920 7371b5077d8d1c7ec266e0398de51c0b 233 SUPERFAMILY SSF50715 5 192 4.19E-53 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 NHAM_RS15920 7371b5077d8d1c7ec266e0398de51c0b 233 PANTHER PTHR33284 6 212 2.1E-68 T 22-04-2016 NHAM_RS15920 7371b5077d8d1c7ec266e0398de51c0b 233 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 96 3.0E-35 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 NHAM_RS15920 7371b5077d8d1c7ec266e0398de51c0b 233 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 187 28.291 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 NHAM_RS15920 7371b5077d8d1c7ec266e0398de51c0b 233 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 184 4.5E-45 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 NHAM_RS15920 7371b5077d8d1c7ec266e0398de51c0b 233 Gene3D G3DSA:2.170.120.20 100 192 4.8E-26 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain NHAM_RS15920 7371b5077d8d1c7ec266e0398de51c0b 233 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 186 2.7E-25 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain NHAM_RS15920 7371b5077d8d1c7ec266e0398de51c0b 233 Gene3D G3DSA:2.40.240.10 6 96 1.8E-28 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 NHAM_RS15920 7371b5077d8d1c7ec266e0398de51c0b 233 Pfam PF01386 Ribosomal L25p family 7 94 1.6E-22 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 NHAM_RS13170 709d57c8a6309fcc814e99500201ee2d 176 Gene3D G3DSA:2.160.10.10 19 169 1.3E-43 T 22-04-2016 NHAM_RS13170 709d57c8a6309fcc814e99500201ee2d 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 124 3.8E-9 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS13170 709d57c8a6309fcc814e99500201ee2d 176 PANTHER PTHR13061 1 170 4.0E-64 T 22-04-2016 NHAM_RS13170 709d57c8a6309fcc814e99500201ee2d 176 SUPERFAMILY SSF51161 16 171 8.18E-45 T 22-04-2016 IPR011004 Trimeric LpxA-like NHAM_RS08110 5f6aaafd754c6fac02b8dc0b841e14d9 354 PANTHER PTHR30100 3 345 1.2E-123 T 22-04-2016 NHAM_RS08110 5f6aaafd754c6fac02b8dc0b841e14d9 354 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 344 145.35 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 NHAM_RS08110 5f6aaafd754c6fac02b8dc0b841e14d9 354 Pfam PF02504 Fatty acid synthesis protein 5 327 3.7E-95 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 NHAM_RS08110 5f6aaafd754c6fac02b8dc0b841e14d9 354 PANTHER PTHR30100:SF1 3 345 1.2E-123 T 22-04-2016 NHAM_RS08110 5f6aaafd754c6fac02b8dc0b841e14d9 354 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 337 2.6E-90 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 NHAM_RS08110 5f6aaafd754c6fac02b8dc0b841e14d9 354 PIRSF PIRSF002465 3 342 3.5E-115 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 NHAM_RS08110 5f6aaafd754c6fac02b8dc0b841e14d9 354 SUPERFAMILY SSF53659 5 338 2.3E-100 T 22-04-2016 NHAM_RS08110 5f6aaafd754c6fac02b8dc0b841e14d9 354 Gene3D G3DSA:3.40.718.10 3 337 3.8E-119 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NHAM_RS18345 9e427359b1b22b7d4a23c8b42a3def30 242 SUPERFAMILY SSF55136 104 242 2.27E-18 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain NHAM_RS18345 9e427359b1b22b7d4a23c8b42a3def30 242 SMART SM00871 95 242 2.5E-14 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding NHAM_RS18345 9e427359b1b22b7d4a23c8b42a3def30 242 Pfam PF06445 GyrI-like small molecule binding domain 114 242 2.2E-10 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain NHAM_RS18345 9e427359b1b22b7d4a23c8b42a3def30 242 Gene3D G3DSA:3.20.80.10 101 242 1.7E-11 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain NHAM_RS04595 f53f445a42c19235fdf91b9645d3bf08 533 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 22 158 6.7E-22 T 22-04-2016 IPR006512 YidE/YbjL duplication NHAM_RS04595 f53f445a42c19235fdf91b9645d3bf08 533 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 359 510 9.1E-36 T 22-04-2016 IPR006512 YidE/YbjL duplication NHAM_RS04595 f53f445a42c19235fdf91b9645d3bf08 533 PANTHER PTHR30445:SF1 3 528 1.6E-114 T 22-04-2016 NHAM_RS04595 f53f445a42c19235fdf91b9645d3bf08 533 Pfam PF06826 Predicted Permease Membrane Region 355 523 4.6E-36 T 22-04-2016 IPR006512 YidE/YbjL duplication NHAM_RS04595 f53f445a42c19235fdf91b9645d3bf08 533 Pfam PF06826 Predicted Permease Membrane Region 18 168 7.5E-34 T 22-04-2016 IPR006512 YidE/YbjL duplication NHAM_RS04595 f53f445a42c19235fdf91b9645d3bf08 533 PANTHER PTHR30445 3 528 1.6E-114 T 22-04-2016 NHAM_RS04595 f53f445a42c19235fdf91b9645d3bf08 533 Gene3D G3DSA:3.30.70.1450 186 252 3.8E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NHAM_RS04595 f53f445a42c19235fdf91b9645d3bf08 533 SUPERFAMILY SSF116726 269 341 1.83E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NHAM_RS04595 f53f445a42c19235fdf91b9645d3bf08 533 SUPERFAMILY SSF116726 185 245 3.53E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NHAM_RS18585 3254818a1bb086e0e5c3296848389e5e 409 Gene3D G3DSA:3.40.50.620 6 175 6.1E-66 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS18585 3254818a1bb086e0e5c3296848389e5e 409 PANTHER PTHR11587 4 408 3.9E-226 T 22-04-2016 NHAM_RS18585 3254818a1bb086e0e5c3296848389e5e 409 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 405 52.237 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS18585 3254818a1bb086e0e5c3296848389e5e 409 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS18585 3254818a1bb086e0e5c3296848389e5e 409 SUPERFAMILY SSF52402 6 171 2.21E-46 T 22-04-2016 NHAM_RS18585 3254818a1bb086e0e5c3296848389e5e 409 Pfam PF00764 Arginosuccinate synthase 9 399 2.4E-154 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS18585 3254818a1bb086e0e5c3296848389e5e 409 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS18585 3254818a1bb086e0e5c3296848389e5e 409 SUPERFAMILY SSF69864 178 406 2.49E-90 T 22-04-2016 NHAM_RS18585 3254818a1bb086e0e5c3296848389e5e 409 PANTHER PTHR11587:SF2 4 408 3.9E-226 T 22-04-2016 NHAM_RS18585 3254818a1bb086e0e5c3296848389e5e 409 Gene3D G3DSA:3.90.1260.10 181 406 2.0E-97 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS18585 3254818a1bb086e0e5c3296848389e5e 409 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 404 5.2E-142 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 PRINTS PR00834 HtrA/DegQ protease family signature 214 231 7.7E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 PRINTS PR00834 HtrA/DegQ protease family signature 139 159 7.7E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 PRINTS PR00834 HtrA/DegQ protease family signature 322 334 7.7E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 PRINTS PR00834 HtrA/DegQ protease family signature 118 130 7.7E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 PRINTS PR00834 HtrA/DegQ protease family signature 180 204 7.7E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 PRINTS PR00834 HtrA/DegQ protease family signature 236 253 7.7E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 SUPERFAMILY SSF50156 268 373 1.73E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 Gene3D G3DSA:2.30.42.10 402 485 7.8E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 Gene3D G3DSA:2.30.42.10 284 379 6.6E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 PANTHER PTHR22939 22 60 1.8E-112 T 22-04-2016 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 PANTHER PTHR22939 80 381 1.8E-112 T 22-04-2016 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 SUPERFAMILY SSF50494 18 58 2.59E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 SUPERFAMILY SSF50494 106 291 2.59E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 Gene3D G3DSA:2.40.10.10 39 171 2.5E-34 T 22-04-2016 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 Gene3D G3DSA:2.40.10.10 172 283 4.5E-46 T 22-04-2016 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 SMART SM00228 282 364 8.0E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 SMART SM00228 401 485 0.0044 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 PANTHER PTHR22939:SF79 22 60 1.8E-112 T 22-04-2016 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 PANTHER PTHR22939:SF79 80 381 1.8E-112 T 22-04-2016 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 SUPERFAMILY SSF50156 402 486 9.6E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 Pfam PF13180 PDZ domain 282 373 7.9E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 489 2.5E-148 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 NHAM_RS13965 4ee4f90a005c21ab3cd3ac149cb1ccf6 497 Pfam PF13365 Trypsin-like peptidase domain 109 243 1.2E-35 T 22-04-2016 NHAM_RS12210 a05cab31ba29dc4ee99ab1c44f99834b 597 Pfam PF05876 Phage terminase large subunit (GpA) 33 571 1.4E-172 T 22-04-2016 IPR008866 Bacteriophage lambda, GpA NHAM_RS00245 557c9003b7675125646b7b6f9adcc5fd 522 PANTHER PTHR10566:SF79 38 439 3.6E-196 T 22-04-2016 NHAM_RS00245 557c9003b7675125646b7b6f9adcc5fd 522 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 9 439 1.0E-157 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 NHAM_RS00245 557c9003b7675125646b7b6f9adcc5fd 522 Gene3D G3DSA:3.90.1200.10 261 312 1.0E-7 T 22-04-2016 NHAM_RS00245 557c9003b7675125646b7b6f9adcc5fd 522 SUPERFAMILY SSF56112 194 433 4.15E-39 T 22-04-2016 IPR011009 Protein kinase-like domain NHAM_RS00245 557c9003b7675125646b7b6f9adcc5fd 522 SUPERFAMILY SSF56112 94 159 4.15E-39 T 22-04-2016 IPR011009 Protein kinase-like domain NHAM_RS00245 557c9003b7675125646b7b6f9adcc5fd 522 PANTHER PTHR10566 38 439 3.6E-196 T 22-04-2016 NHAM_RS00245 557c9003b7675125646b7b6f9adcc5fd 522 Pfam PF03109 ABC1 family 112 231 8.7E-30 T 22-04-2016 IPR004147 UbiB domain NHAM_RS18080 c5284c6debc4c2cb93b346d8a01af18e 170 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 8 155 8.3E-46 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NHAM_RS18080 c5284c6debc4c2cb93b346d8a01af18e 170 PANTHER PTHR30194 1 168 4.2E-65 T 22-04-2016 NHAM_RS18080 c5284c6debc4c2cb93b346d8a01af18e 170 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 118 152 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 NHAM_RS18080 c5284c6debc4c2cb93b346d8a01af18e 170 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 8 158 8.2E-46 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NHAM_RS18080 c5284c6debc4c2cb93b346d8a01af18e 170 SUPERFAMILY SSF53098 7 160 7.74E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS18080 c5284c6debc4c2cb93b346d8a01af18e 170 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 66 82 1.1E-31 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NHAM_RS18080 c5284c6debc4c2cb93b346d8a01af18e 170 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 9 22 1.1E-31 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NHAM_RS18080 c5284c6debc4c2cb93b346d8a01af18e 170 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 143 155 1.1E-31 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NHAM_RS18080 c5284c6debc4c2cb93b346d8a01af18e 170 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 88 104 1.1E-31 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NHAM_RS18080 c5284c6debc4c2cb93b346d8a01af18e 170 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 112 131 1.1E-31 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NHAM_RS18080 c5284c6debc4c2cb93b346d8a01af18e 170 Gene3D G3DSA:3.30.420.10 7 160 2.9E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS18080 c5284c6debc4c2cb93b346d8a01af18e 170 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 6 158 46.121 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NHAM_RS19855 7957899ea219a5d6bc70c9787074051c 312 PANTHER PTHR41251:SF1 4 307 8.4E-51 T 22-04-2016 NHAM_RS19855 7957899ea219a5d6bc70c9787074051c 312 SMART SM00559 55 185 8.6E-18 T 22-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 NHAM_RS19855 7957899ea219a5d6bc70c9787074051c 312 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 3 257 32.008 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NHAM_RS19855 7957899ea219a5d6bc70c9787074051c 312 Gene3D G3DSA:2.40.290.10 5 150 1.7E-13 T 22-04-2016 IPR016194 SPOC-like, C-terminal domain NHAM_RS19855 7957899ea219a5d6bc70c9787074051c 312 TIGRFAM TIGR02772 Ku_bact: Ku protein 4 258 2.6E-93 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NHAM_RS19855 7957899ea219a5d6bc70c9787074051c 312 PANTHER PTHR41251 4 307 8.4E-51 T 22-04-2016 NHAM_RS19855 7957899ea219a5d6bc70c9787074051c 312 PIRSF PIRSF006493 1 304 1.9E-104 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NHAM_RS19855 7957899ea219a5d6bc70c9787074051c 312 SUPERFAMILY SSF100939 3 257 1.04E-61 T 22-04-2016 IPR016194 SPOC-like, C-terminal domain NHAM_RS19855 7957899ea219a5d6bc70c9787074051c 312 Pfam PF02735 Ku70/Ku80 beta-barrel domain 14 194 1.3E-35 T 22-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 NHAM_RS13150 f7bdaf2ad512504178b2e89536084b9e 202 SUPERFAMILY SSF141371 12 86 7.06E-8 T 22-04-2016 NHAM_RS13150 f7bdaf2ad512504178b2e89536084b9e 202 SUPERFAMILY SSF141371 112 190 1.57E-7 T 22-04-2016 NHAM_RS13150 f7bdaf2ad512504178b2e89536084b9e 202 Gene3D G3DSA:2.40.10.220 115 163 7.6E-4 T 22-04-2016 NHAM_RS13150 f7bdaf2ad512504178b2e89536084b9e 202 Pfam PF07238 PilZ domain 13 100 3.5E-8 T 22-04-2016 IPR009875 PilZ domain GO:0035438 NHAM_RS13150 f7bdaf2ad512504178b2e89536084b9e 202 Pfam PF07238 PilZ domain 116 188 4.8E-6 T 22-04-2016 IPR009875 PilZ domain GO:0035438 NHAM_RS11780 b591554c9cc6dd20b36c0c1f22a07680 601 Gene3D G3DSA:3.40.50.1820 226 569 3.2E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS11780 b591554c9cc6dd20b36c0c1f22a07680 601 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 111 283 4.5E-76 T 22-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- NHAM_RS11780 b591554c9cc6dd20b36c0c1f22a07680 601 PANTHER PTHR36837:SF2 23 600 1.7E-291 T 22-04-2016 NHAM_RS11780 b591554c9cc6dd20b36c0c1f22a07680 601 SUPERFAMILY SSF53474 241 527 5.61E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS11780 b591554c9cc6dd20b36c0c1f22a07680 601 Pfam PF00561 alpha/beta hydrolase fold 317 522 1.4E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS11780 b591554c9cc6dd20b36c0c1f22a07680 601 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 71 598 8.5E-224 T 22-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 NHAM_RS11780 b591554c9cc6dd20b36c0c1f22a07680 601 PANTHER PTHR36837 23 600 1.7E-291 T 22-04-2016 NHAM_RS05875 e0b019b2deda2ed487ddaefce9d75494 858 Pfam PF00271 Helicase conserved C-terminal domain 435 508 2.3E-4 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS05875 e0b019b2deda2ed487ddaefce9d75494 858 SMART SM00490 424 510 3.5E-5 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS05875 e0b019b2deda2ed487ddaefce9d75494 858 Gene3D G3DSA:3.40.50.300 378 401 5.9E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05875 e0b019b2deda2ed487ddaefce9d75494 858 Gene3D G3DSA:3.40.50.300 438 520 5.9E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05875 e0b019b2deda2ed487ddaefce9d75494 858 SUPERFAMILY SSF52540 349 402 5.5E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05875 e0b019b2deda2ed487ddaefce9d75494 858 SUPERFAMILY SSF52540 433 520 5.5E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05875 e0b019b2deda2ed487ddaefce9d75494 858 SUPERFAMILY SSF52540 149 299 5.5E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05875 e0b019b2deda2ed487ddaefce9d75494 858 SMART SM00487 135 326 4.1E-12 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS05875 e0b019b2deda2ed487ddaefce9d75494 858 Pfam PF00270 DEAD/DEAH box helicase 143 282 8.1E-12 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NHAM_RS05875 e0b019b2deda2ed487ddaefce9d75494 858 Gene3D G3DSA:3.40.50.300 137 287 2.4E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05875 e0b019b2deda2ed487ddaefce9d75494 858 SMART SM00382 152 320 9.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS10590 2bff209c6130e8dca9724bb30ae97a84 251 Gene3D G3DSA:2.40.160.20 35 249 3.5E-32 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS10590 2bff209c6130e8dca9724bb30ae97a84 251 SUPERFAMILY SSF56925 42 247 1.65E-29 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS10590 2bff209c6130e8dca9724bb30ae97a84 251 Pfam PF13505 Outer membrane protein beta-barrel domain 15 210 9.8E-18 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel NHAM_RS10590 2bff209c6130e8dca9724bb30ae97a84 251 PANTHER PTHR34001 1 251 1.7E-84 T 22-04-2016 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 TIGRFAM TIGR02880 cbbX_cfxQ: CbbX protein 5 287 3.0E-159 T 22-04-2016 IPR000470 CbxX/CfqX, monofunctional GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PANTHER PTHR13779:SF20 17 281 3.8E-95 T 22-04-2016 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 SMART SM00382 60 199 1.8E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 65 196 1.4E-16 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 Gene3D G3DSA:3.40.50.300 22 214 4.2E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 SUPERFAMILY SSF52540 18 274 1.07E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00819 CbxX/CfqX superfamily signature 63 78 5.0E-74 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00819 CbxX/CfqX superfamily signature 146 158 5.0E-74 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00819 CbxX/CfqX superfamily signature 23 37 5.0E-74 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00819 CbxX/CfqX superfamily signature 167 184 5.0E-74 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00819 CbxX/CfqX superfamily signature 241 253 5.0E-74 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00819 CbxX/CfqX superfamily signature 115 134 5.0E-74 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00819 CbxX/CfqX superfamily signature 101 115 5.0E-74 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00819 CbxX/CfqX superfamily signature 184 203 5.0E-74 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00820 CbxX/CfqX protein signature 134 147 2.9E-48 T 22-04-2016 IPR000470 CbxX/CfqX, monofunctional GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00820 CbxX/CfqX protein signature 77 92 2.9E-48 T 22-04-2016 IPR000470 CbxX/CfqX, monofunctional GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00820 CbxX/CfqX protein signature 18 32 2.9E-48 T 22-04-2016 IPR000470 CbxX/CfqX, monofunctional GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00820 CbxX/CfqX protein signature 273 287 2.9E-48 T 22-04-2016 IPR000470 CbxX/CfqX, monofunctional GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00820 CbxX/CfqX protein signature 248 259 2.9E-48 T 22-04-2016 IPR000470 CbxX/CfqX, monofunctional GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00820 CbxX/CfqX protein signature 36 50 2.9E-48 T 22-04-2016 IPR000470 CbxX/CfqX, monofunctional GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PRINTS PR00820 CbxX/CfqX protein signature 233 244 2.9E-48 T 22-04-2016 IPR000470 CbxX/CfqX, monofunctional GO:0005524 NHAM_RS19225 7c771e52c5339adfdf60624979dd9a6d 304 PANTHER PTHR13779 17 281 3.8E-95 T 22-04-2016 NHAM_RS16570 9afb8ea2d71f05ee2e4d0859d56bf308 387 Pfam PF01435 Peptidase family M48 100 196 1.1E-18 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NHAM_RS16570 9afb8ea2d71f05ee2e4d0859d56bf308 387 Pfam PF01435 Peptidase family M48 240 330 1.3E-12 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NHAM_RS16570 9afb8ea2d71f05ee2e4d0859d56bf308 387 Gene3D G3DSA:3.30.2010.10 95 181 8.5E-29 T 22-04-2016 NHAM_RS16570 9afb8ea2d71f05ee2e4d0859d56bf308 387 PANTHER PTHR10120:SF19 228 351 2.2E-82 T 22-04-2016 NHAM_RS16570 9afb8ea2d71f05ee2e4d0859d56bf308 387 PANTHER PTHR10120:SF19 65 212 2.2E-82 T 22-04-2016 NHAM_RS16570 9afb8ea2d71f05ee2e4d0859d56bf308 387 PANTHER PTHR10120:SF19 10 39 2.2E-82 T 22-04-2016 NHAM_RS16570 9afb8ea2d71f05ee2e4d0859d56bf308 387 PANTHER PTHR10120 228 351 2.2E-82 T 22-04-2016 NHAM_RS16570 9afb8ea2d71f05ee2e4d0859d56bf308 387 PANTHER PTHR10120 65 212 2.2E-82 T 22-04-2016 NHAM_RS16570 9afb8ea2d71f05ee2e4d0859d56bf308 387 PANTHER PTHR10120 10 39 2.2E-82 T 22-04-2016 NHAM_RS09570 552ebe69ac9febf74dc4a65408604056 184 Pfam PF02417 Chromate transporter 6 171 1.3E-24 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 NHAM_RS09570 552ebe69ac9febf74dc4a65408604056 184 PANTHER PTHR33567 135 182 2.2E-53 T 22-04-2016 NHAM_RS09570 552ebe69ac9febf74dc4a65408604056 184 PANTHER PTHR33567 5 117 2.2E-53 T 22-04-2016 NHAM_RS09570 552ebe69ac9febf74dc4a65408604056 184 PANTHER PTHR33567:SF1 135 182 2.2E-53 T 22-04-2016 NHAM_RS09570 552ebe69ac9febf74dc4a65408604056 184 PANTHER PTHR33567:SF1 5 117 2.2E-53 T 22-04-2016 NHAM_RS02200 1a9357788839086807b07a02b7bb960f 541 PANTHER PTHR11938 166 529 4.7E-100 T 22-04-2016 NHAM_RS02200 1a9357788839086807b07a02b7bb960f 541 Pfam PF01645 Conserved region in glutamate synthase 164 481 5.7E-82 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 NHAM_RS02200 1a9357788839086807b07a02b7bb960f 541 PANTHER PTHR11938:SF50 166 529 4.7E-100 T 22-04-2016 NHAM_RS02200 1a9357788839086807b07a02b7bb960f 541 Gene3D G3DSA:3.20.20.70 57 505 5.4E-120 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS02200 1a9357788839086807b07a02b7bb960f 541 PIRSF PIRSF006429 19 540 2.0E-160 T 22-04-2016 IPR024188 Glutamate synthase large subunit-like protein NHAM_RS02200 1a9357788839086807b07a02b7bb960f 541 PIRSF PIRSF500060 15 537 2.9E-234 T 22-04-2016 IPR027283 Glutamate synthase large subunit-like protein, bacteria NHAM_RS02200 1a9357788839086807b07a02b7bb960f 541 SUPERFAMILY SSF51395 36 510 1.2E-133 T 22-04-2016 NHAM_RS08490 d9f3b5404f52dd7a71b532b11034142b 181 SUPERFAMILY SSF52172 7 129 1.57E-34 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS08490 d9f3b5404f52dd7a71b532b11034142b 181 PANTHER PTHR26402 9 129 2.8E-32 T 22-04-2016 NHAM_RS08490 d9f3b5404f52dd7a71b532b11034142b 181 Gene3D G3DSA:3.40.50.2300 8 129 1.1E-31 T 22-04-2016 NHAM_RS08490 d9f3b5404f52dd7a71b532b11034142b 181 Pfam PF00072 Response regulator receiver domain 12 125 1.3E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS08490 d9f3b5404f52dd7a71b532b11034142b 181 SMART SM00448 9 125 3.6E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS14245 48396a7e016e71eb2f7f9932f8f9e7fc 470 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 5 469 1.6E-186 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 NHAM_RS14245 48396a7e016e71eb2f7f9932f8f9e7fc 470 Pfam PF00483 Nucleotidyl transferase 7 286 1.4E-54 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NHAM_RS14245 48396a7e016e71eb2f7f9932f8f9e7fc 470 Pfam PF01050 Mannose-6-phosphate isomerase 316 465 9.5E-65 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 NHAM_RS14245 48396a7e016e71eb2f7f9932f8f9e7fc 470 SUPERFAMILY SSF51182 189 469 3.04E-74 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS14245 48396a7e016e71eb2f7f9932f8f9e7fc 470 PANTHER PTHR12526 155 289 1.6E-101 T 22-04-2016 NHAM_RS14245 48396a7e016e71eb2f7f9932f8f9e7fc 470 PANTHER PTHR12526 352 469 1.6E-101 T 22-04-2016 NHAM_RS14245 48396a7e016e71eb2f7f9932f8f9e7fc 470 Gene3D G3DSA:2.60.120.10 358 469 4.8E-44 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS14245 48396a7e016e71eb2f7f9932f8f9e7fc 470 SUPERFAMILY SSF53448 5 281 1.31E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS14245 48396a7e016e71eb2f7f9932f8f9e7fc 470 Gene3D G3DSA:3.90.550.10 4 271 8.9E-85 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS14245 48396a7e016e71eb2f7f9932f8f9e7fc 470 PANTHER PTHR12526:SF387 155 289 1.6E-101 T 22-04-2016 NHAM_RS14245 48396a7e016e71eb2f7f9932f8f9e7fc 470 PANTHER PTHR12526:SF387 352 469 1.6E-101 T 22-04-2016 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 PANTHER PTHR18919 1 427 1.1E-256 T 22-04-2016 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 Gene3D G3DSA:3.40.47.10 214 292 3.8E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 Gene3D G3DSA:3.40.47.10 5 124 3.8E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 425 3.7E-115 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 ProSitePatterns PS00737 Thiolases signature 2. 373 389 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 PIRSF PIRSF000429 1 427 1.2E-111 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 Pfam PF00108 Thiolase, N-terminal domain 5 280 2.0E-54 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 PANTHER PTHR18919:SF85 1 427 1.1E-256 T 22-04-2016 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 SUPERFAMILY SSF53901 288 426 4.61E-32 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 Gene3D G3DSA:3.40.47.10 166 213 1.2E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 Gene3D G3DSA:3.40.47.10 294 426 1.2E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 Pfam PF02803 Thiolase, C-terminal domain 287 425 8.6E-35 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NHAM_RS05535 0f1b15d2f1d124e69f52eb73492f33f5 427 SUPERFAMILY SSF53901 5 287 3.46E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS18640 5353590b87dd62ccbf3438b4048c7f68 213 Pfam PF16357 Putative PepSY_TM-like 17 212 5.9E-80 T 22-04-2016 IPR032307 Putative PepSY TM-like protein NHAM_RS18640 5353590b87dd62ccbf3438b4048c7f68 213 PANTHER PTHR40115 1 212 2.2E-44 T 22-04-2016 NHAM_RS14725 bdfc58d056f896a430d8c88279379d9a 179 PANTHER PTHR30295 11 174 1.1E-61 T 22-04-2016 NHAM_RS14725 bdfc58d056f896a430d8c88279379d9a 179 PIRSF PIRSF005900 10 177 3.6E-46 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NHAM_RS14725 bdfc58d056f896a430d8c88279379d9a 179 PANTHER PTHR30295:SF6 11 174 1.1E-61 T 22-04-2016 NHAM_RS14725 bdfc58d056f896a430d8c88279379d9a 179 Gene3D G3DSA:1.20.1260.10 6 168 6.7E-55 T 22-04-2016 IPR012347 Ferritin-related NHAM_RS14725 bdfc58d056f896a430d8c88279379d9a 179 Pfam PF00210 Ferritin-like domain 33 167 3.0E-26 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 NHAM_RS14725 bdfc58d056f896a430d8c88279379d9a 179 SUPERFAMILY SSF47240 13 169 1.57E-44 T 22-04-2016 IPR009078 Ferritin-like superfamily NHAM_RS14725 bdfc58d056f896a430d8c88279379d9a 179 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 53 69 3.1E-8 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NHAM_RS14725 bdfc58d056f896a430d8c88279379d9a 179 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 77 93 3.1E-8 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NHAM_RS14725 bdfc58d056f896a430d8c88279379d9a 179 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 149 167 3.1E-8 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NHAM_RS15665 dce49b341570cc3c2efa4d6ed832c6a1 184 SUPERFAMILY SSF51182 2 182 9.79E-66 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS15665 dce49b341570cc3c2efa4d6ed832c6a1 184 Gene3D G3DSA:2.60.120.10 3 180 4.6E-70 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS15665 dce49b341570cc3c2efa4d6ed832c6a1 184 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 6 184 1.0E-101 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NHAM_RS15665 dce49b341570cc3c2efa4d6ed832c6a1 184 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 4 178 3.0E-61 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NHAM_RS15665 dce49b341570cc3c2efa4d6ed832c6a1 184 PANTHER PTHR21047 7 183 3.3E-62 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NHAM_RS15665 dce49b341570cc3c2efa4d6ed832c6a1 184 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 7 176 3.4E-65 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 Gene3D G3DSA:3.30.930.10 260 464 4.6E-135 T 22-04-2016 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 Gene3D G3DSA:3.30.930.10 107 223 4.6E-135 T 22-04-2016 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 PRINTS PR00981 Seryl-tRNA synthetase signature 374 390 4.6E-27 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 PRINTS PR00981 Seryl-tRNA synthetase signature 357 370 4.6E-27 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 PRINTS PR00981 Seryl-tRNA synthetase signature 305 317 4.6E-27 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 PRINTS PR00981 Seryl-tRNA synthetase signature 395 411 4.6E-27 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 PRINTS PR00981 Seryl-tRNA synthetase signature 317 330 4.6E-27 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 5.2E-28 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 465 38.493 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 264 443 6.0E-34 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 Gene3D G3DSA:1.10.287.40 1 106 1.5E-26 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 SUPERFAMILY SSF46589 1 114 7.32E-27 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 460 3.7E-140 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 SUPERFAMILY SSF55681 265 461 2.15E-90 T 22-04-2016 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 SUPERFAMILY SSF55681 118 225 2.15E-90 T 22-04-2016 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 PANTHER PTHR11778 1 223 1.0E-188 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NHAM_RS09160 32c69d419de482c48c34935d13ff8ecd 470 PANTHER PTHR11778 253 466 1.0E-188 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 Gene3D G3DSA:1.10.40.30 425 471 9.4E-28 T 22-04-2016 NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 SUPERFAMILY SSF48557 12 468 2.2E-151 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 Hamap MF_00743 Fumarate hydratase class II [fumC]. 12 470 88.781 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 Gene3D G3DSA:1.10.275.10 12 146 5.7E-62 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 PRINTS PR00149 Fumarate lyase superfamily signature 279 306 1.6E-32 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 PRINTS PR00149 Fumarate lyase superfamily signature 142 160 1.6E-32 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 PRINTS PR00149 Fumarate lyase superfamily signature 188 206 1.6E-32 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 PRINTS PR00149 Fumarate lyase superfamily signature 325 341 1.6E-32 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 Gene3D G3DSA:1.20.200.10 147 424 4.9E-101 T 22-04-2016 NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 Pfam PF00206 Lyase 20 350 5.3E-116 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 PANTHER PTHR11444:SF1 1 470 3.1E-248 T 22-04-2016 NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 13 467 3.6E-223 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 Pfam PF10415 Fumarase C C-terminus 416 469 1.5E-21 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 ProSitePatterns PS00163 Fumarate lyases signature. 325 334 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 NHAM_RS14000 338559f55e66f3e247e6df019d923604 471 PANTHER PTHR11444 1 470 3.1E-248 T 22-04-2016 IPR000362 Fumarate lyase family NHAM_RS07685 b91808775c15d9285b2489667694f45d 426 SUPERFAMILY SSF53901 227 424 5.01E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS07685 b91808775c15d9285b2489667694f45d 426 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 13 259 3.9E-33 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal NHAM_RS07685 b91808775c15d9285b2489667694f45d 426 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 268 381 1.2E-33 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal NHAM_RS07685 b91808775c15d9285b2489667694f45d 426 Gene3D G3DSA:3.40.47.10 13 269 6.9E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS07685 b91808775c15d9285b2489667694f45d 426 PANTHER PTHR11712 13 116 1.2E-125 T 22-04-2016 NHAM_RS07685 b91808775c15d9285b2489667694f45d 426 PANTHER PTHR11712 141 423 1.2E-125 T 22-04-2016 NHAM_RS07685 b91808775c15d9285b2489667694f45d 426 SMART SM00825 Beta-ketoacyl synthase 13 426 2.2E-15 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NHAM_RS07685 b91808775c15d9285b2489667694f45d 426 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 167 183 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site NHAM_RS07685 b91808775c15d9285b2489667694f45d 426 Gene3D G3DSA:3.40.47.10 277 423 1.7E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS07685 b91808775c15d9285b2489667694f45d 426 SUPERFAMILY SSF53901 13 266 4.94E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS00940 45916aba982753bb4762960775435b40 449 PIRSF PIRSF006603 1 448 7.8E-97 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NHAM_RS00940 45916aba982753bb4762960775435b40 449 Pfam PF01554 MatE 17 176 1.0E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NHAM_RS00940 45916aba982753bb4762960775435b40 449 Pfam PF01554 MatE 246 406 5.1E-26 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NHAM_RS00940 45916aba982753bb4762960775435b40 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 418 9.7E-69 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NHAM_RS00940 45916aba982753bb4762960775435b40 449 PANTHER PTHR11206 3 447 6.8E-146 T 22-04-2016 NHAM_RS00940 45916aba982753bb4762960775435b40 449 PANTHER PTHR11206:SF107 3 447 6.8E-146 T 22-04-2016 NHAM_RS08400 cb5bd9e4b70d47f1041574a75b108773 265 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 223 8.7E-24 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS08400 cb5bd9e4b70d47f1041574a75b108773 265 PANTHER PTHR21198:SF2 1 263 1.4E-75 T 22-04-2016 NHAM_RS08400 cb5bd9e4b70d47f1041574a75b108773 265 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 188 198 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS08400 cb5bd9e4b70d47f1041574a75b108773 265 TIGRFAM TIGR00067 glut_race: glutamate racemase 7 227 1.2E-50 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS08400 cb5bd9e4b70d47f1041574a75b108773 265 SUPERFAMILY SSF53681 110 262 2.01E-28 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS08400 cb5bd9e4b70d47f1041574a75b108773 265 Gene3D G3DSA:3.40.50.1860 5 172 2.1E-42 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS08400 cb5bd9e4b70d47f1041574a75b108773 265 Hamap MF_00258 Glutamate racemase [murI]. 5 262 29.892 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS08400 cb5bd9e4b70d47f1041574a75b108773 265 SUPERFAMILY SSF53681 7 108 3.33E-29 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS08400 cb5bd9e4b70d47f1041574a75b108773 265 PANTHER PTHR21198 1 263 1.4E-75 T 22-04-2016 NHAM_RS08400 cb5bd9e4b70d47f1041574a75b108773 265 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 72 80 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS02385 401ba6c9d250a7bc9b5f116851552e32 308 Pfam PF00294 pfkB family carbohydrate kinase 6 290 7.7E-37 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB NHAM_RS02385 401ba6c9d250a7bc9b5f116851552e32 308 SUPERFAMILY SSF53613 3 300 7.17E-58 T 22-04-2016 IPR029056 Ribokinase-like NHAM_RS02385 401ba6c9d250a7bc9b5f116851552e32 308 PANTHER PTHR10584 1 300 4.6E-94 T 22-04-2016 NHAM_RS02385 401ba6c9d250a7bc9b5f116851552e32 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 244 257 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 NHAM_RS02385 401ba6c9d250a7bc9b5f116851552e32 308 Gene3D G3DSA:3.40.1190.20 4 303 3.0E-67 T 22-04-2016 IPR029056 Ribokinase-like NHAM_RS02385 401ba6c9d250a7bc9b5f116851552e32 308 PANTHER PTHR10584:SF157 1 300 4.6E-94 T 22-04-2016 NHAM_RS15270 5eee5576edc66437657da00cc77a18b2 466 Gene3D G3DSA:2.60.40.1610 61 197 3.3E-46 T 22-04-2016 IPR010679 Domain of unknown function DUF1254 NHAM_RS15270 5eee5576edc66437657da00cc77a18b2 466 Gene3D G3DSA:2.60.120.600 325 463 6.9E-45 T 22-04-2016 IPR010621 Domain of unknown function DUF1214 NHAM_RS15270 5eee5576edc66437657da00cc77a18b2 466 Gene3D G3DSA:1.10.3360.10 198 280 1.5E-30 T 22-04-2016 IPR023289 VPA0735-like domain NHAM_RS15270 5eee5576edc66437657da00cc77a18b2 466 Pfam PF06742 Protein of unknown function (DUF1214) 342 448 2.0E-30 T 22-04-2016 IPR010621 Domain of unknown function DUF1214 NHAM_RS15270 5eee5576edc66437657da00cc77a18b2 466 PANTHER PTHR36509:SF1 27 463 6.8E-50 T 22-04-2016 NHAM_RS15270 5eee5576edc66437657da00cc77a18b2 466 SUPERFAMILY SSF160935 3 463 1.18E-118 T 22-04-2016 NHAM_RS15270 5eee5576edc66437657da00cc77a18b2 466 Pfam PF06863 Protein of unknown function (DUF1254) 62 194 4.5E-24 T 22-04-2016 IPR010679 Domain of unknown function DUF1254 NHAM_RS15270 5eee5576edc66437657da00cc77a18b2 466 PANTHER PTHR36509 27 463 6.8E-50 T 22-04-2016 NHAM_RS02680 03b0998077e92a41496875fd2e35825c 200 Gene3D G3DSA:3.40.630.30 15 186 4.3E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS02680 03b0998077e92a41496875fd2e35825c 200 PANTHER PTHR23091 15 163 2.0E-29 T 22-04-2016 NHAM_RS02680 03b0998077e92a41496875fd2e35825c 200 SUPERFAMILY SSF55729 17 167 9.45E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS02680 03b0998077e92a41496875fd2e35825c 200 PANTHER PTHR23091:SF190 15 163 2.0E-29 T 22-04-2016 NHAM_RS02680 03b0998077e92a41496875fd2e35825c 200 Pfam PF13302 Acetyltransferase (GNAT) domain 24 158 8.5E-27 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS14500 a64f848e162eb669e94c5104f463f340 1152 SUPERFAMILY SSF52540 2 119 1.68E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14500 a64f848e162eb669e94c5104f463f340 1152 SUPERFAMILY SSF52540 1043 1142 1.68E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14500 a64f848e162eb669e94c5104f463f340 1152 Gene3D G3DSA:3.40.50.300 318 319 2.0E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14500 a64f848e162eb669e94c5104f463f340 1152 Gene3D G3DSA:3.40.50.300 2 171 2.0E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14500 a64f848e162eb669e94c5104f463f340 1152 Gene3D G3DSA:3.40.50.300 1050 1140 2.0E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14500 a64f848e162eb669e94c5104f463f340 1152 PANTHER PTHR41259 1 695 7.8E-20 T 22-04-2016 NHAM_RS14500 a64f848e162eb669e94c5104f463f340 1152 Pfam PF13514 AAA domain 2 204 8.2E-70 T 22-04-2016 NHAM_RS14500 a64f848e162eb669e94c5104f463f340 1152 PANTHER PTHR41259 823 1143 7.8E-20 T 22-04-2016 NHAM_RS14500 a64f848e162eb669e94c5104f463f340 1152 PANTHER PTHR41259:SF1 823 1143 7.8E-20 T 22-04-2016 NHAM_RS14500 a64f848e162eb669e94c5104f463f340 1152 PANTHER PTHR41259:SF1 1 695 7.8E-20 T 22-04-2016 NHAM_RS18175 e5baa8838e68a80134dfffb2be9d62a0 342 Pfam PF00691 OmpA family 227 333 2.2E-18 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS18175 e5baa8838e68a80134dfffb2be9d62a0 342 Gene3D G3DSA:3.30.1330.60 213 340 5.3E-32 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS18175 e5baa8838e68a80134dfffb2be9d62a0 342 PANTHER PTHR30329 221 337 3.1E-30 T 22-04-2016 NHAM_RS18175 e5baa8838e68a80134dfffb2be9d62a0 342 SUPERFAMILY SSF103088 216 339 8.37E-29 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS18175 e5baa8838e68a80134dfffb2be9d62a0 342 PANTHER PTHR30329:SF4 221 337 3.1E-30 T 22-04-2016 NHAM_RS13120 dcb6f517523b7e82852140114cbe2b2c 119 PANTHER PTHR28620 1 118 4.1E-27 T 22-04-2016 NHAM_RS13120 dcb6f517523b7e82852140114cbe2b2c 119 Gene3D G3DSA:3.90.1590.10 3 106 2.7E-21 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 NHAM_RS13120 dcb6f517523b7e82852140114cbe2b2c 119 SUPERFAMILY SSF51316 5 110 1.15E-28 T 22-04-2016 IPR011057 Mss4-like NHAM_RS13120 dcb6f517523b7e82852140114cbe2b2c 119 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 105 8.5E-7 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 NHAM_RS19630 1ac68071e03789e9d6905d4125f26a84 604 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 209 345 2.1E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS19630 1ac68071e03789e9d6905d4125f26a84 604 Gene3D G3DSA:3.40.50.300 3 102 3.3E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19630 1ac68071e03789e9d6905d4125f26a84 604 Gene3D G3DSA:3.40.50.300 139 364 3.3E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19630 1ac68071e03789e9d6905d4125f26a84 604 Pfam PF13175 AAA ATPase domain 3 49 6.0E-12 T 22-04-2016 NHAM_RS19630 1ac68071e03789e9d6905d4125f26a84 604 SUPERFAMILY SSF52540 3 101 1.12E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19630 1ac68071e03789e9d6905d4125f26a84 604 SUPERFAMILY SSF52540 210 365 1.12E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15800 3a2ce04218fcefbadebf93a0c77a0657 66 Pfam PF01527 Transposase 8 55 5.0E-7 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NHAM_RS15800 3a2ce04218fcefbadebf93a0c77a0657 66 Gene3D G3DSA:1.10.10.60 8 52 8.6E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS00500 e3b5874747ddb87dc5c11d6c66066438 342 SUPERFAMILY SSF48019 214 335 2.55E-10 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 NHAM_RS00500 e3b5874747ddb87dc5c11d6c66066438 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 21 325 4.7E-47 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 NHAM_RS00500 e3b5874747ddb87dc5c11d6c66066438 342 PANTHER PTHR34388 1 342 1.6E-58 T 22-04-2016 NHAM_RS00500 e3b5874747ddb87dc5c11d6c66066438 342 Gene3D G3DSA:3.40.50.300 20 125 7.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00500 e3b5874747ddb87dc5c11d6c66066438 342 Gene3D G3DSA:1.10.8.60 144 228 6.1E-13 T 22-04-2016 NHAM_RS00500 e3b5874747ddb87dc5c11d6c66066438 342 Pfam PF06144 DNA polymerase III, delta subunit 24 190 2.3E-11 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 NHAM_RS00500 e3b5874747ddb87dc5c11d6c66066438 342 SUPERFAMILY SSF52540 10 210 6.37E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS06470 8a979c3da995b444febfc7b0bec8fd7d 81 Gene3D G3DSA:1.10.1470.10 1 66 6.9E-24 T 22-04-2016 IPR008462 CsbD-like NHAM_RS06470 8a979c3da995b444febfc7b0bec8fd7d 81 SUPERFAMILY SSF69047 1 66 7.98E-17 T 22-04-2016 IPR008462 CsbD-like NHAM_RS06470 8a979c3da995b444febfc7b0bec8fd7d 81 Pfam PF05532 CsbD-like 4 56 1.5E-19 T 22-04-2016 IPR008462 CsbD-like NHAM_RS01205 3fed4f675e402570dbfcafcf4e1e5631 183 PANTHER PTHR23091:SF187 5 173 3.1E-45 T 22-04-2016 NHAM_RS01205 3fed4f675e402570dbfcafcf4e1e5631 183 Pfam PF13420 Acetyltransferase (GNAT) domain 6 161 3.7E-24 T 22-04-2016 NHAM_RS01205 3fed4f675e402570dbfcafcf4e1e5631 183 SUPERFAMILY SSF55729 6 168 1.65E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS01205 3fed4f675e402570dbfcafcf4e1e5631 183 Gene3D G3DSA:3.40.630.30 4 170 3.1E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS01205 3fed4f675e402570dbfcafcf4e1e5631 183 PANTHER PTHR23091 5 173 3.1E-45 T 22-04-2016 NHAM_RS00210 cb780ae5a4b5d9b3860996852c687349 159 PANTHER PTHR33202 3 154 3.4E-82 T 22-04-2016 NHAM_RS00210 cb780ae5a4b5d9b3860996852c687349 159 PANTHER PTHR33202:SF3 3 154 3.4E-82 T 22-04-2016 NHAM_RS00210 cb780ae5a4b5d9b3860996852c687349 159 SUPERFAMILY SSF46785 30 154 1.87E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS00210 cb780ae5a4b5d9b3860996852c687349 159 Pfam PF01475 Ferric uptake regulator family 37 152 7.4E-19 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 NHAM_RS00210 cb780ae5a4b5d9b3860996852c687349 159 Gene3D G3DSA:1.10.10.10 28 109 2.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS20540 8f510c6e7978f14713ccbdef7e5297a7 478 Gene3D G3DSA:3.30.43.10 6 106 1.9E-27 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NHAM_RS20540 8f510c6e7978f14713ccbdef7e5297a7 478 Pfam PF02913 FAD linked oxidases, C-terminal domain 228 477 4.5E-53 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NHAM_RS20540 8f510c6e7978f14713ccbdef7e5297a7 478 PANTHER PTHR11748 9 478 1.1E-212 T 22-04-2016 NHAM_RS20540 8f510c6e7978f14713ccbdef7e5297a7 478 SUPERFAMILY SSF55103 204 477 8.67E-57 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NHAM_RS20540 8f510c6e7978f14713ccbdef7e5297a7 478 Gene3D G3DSA:1.10.45.10 438 477 3.6E-12 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NHAM_RS20540 8f510c6e7978f14713ccbdef7e5297a7 478 SUPERFAMILY SSF56176 15 228 1.05E-70 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NHAM_RS20540 8f510c6e7978f14713ccbdef7e5297a7 478 PANTHER PTHR11748:SF76 9 478 1.1E-212 T 22-04-2016 NHAM_RS20540 8f510c6e7978f14713ccbdef7e5297a7 478 Gene3D G3DSA:3.30.465.10 107 228 3.7E-35 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NHAM_RS20540 8f510c6e7978f14713ccbdef7e5297a7 478 Pfam PF01565 FAD binding domain 54 188 3.4E-35 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NHAM_RS08245 b48ef550bbe8bc240ed887f0e296a820 239 Pfam PF13401 AAA domain 23 144 3.5E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS08245 b48ef550bbe8bc240ed887f0e296a820 239 SUPERFAMILY SSF52540 20 168 2.21E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08245 b48ef550bbe8bc240ed887f0e296a820 239 Gene3D G3DSA:3.40.50.300 22 143 1.8E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11355 a530c5afde6b95a02141ba14fa8c4c82 211 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 11 201 41.04 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NHAM_RS11355 a530c5afde6b95a02141ba14fa8c4c82 211 Pfam PF00574 Clp protease 21 200 2.7E-81 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NHAM_RS11355 a530c5afde6b95a02141ba14fa8c4c82 211 Gene3D G3DSA:3.90.226.10 11 201 1.7E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS11355 a530c5afde6b95a02141ba14fa8c4c82 211 SUPERFAMILY SSF52096 11 200 1.47E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS11355 a530c5afde6b95a02141ba14fa8c4c82 211 PANTHER PTHR10381 1 204 6.4E-136 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NHAM_RS11355 a530c5afde6b95a02141ba14fa8c4c82 211 PRINTS PR00127 Clp protease catalytic subunit P signature 119 138 4.9E-47 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NHAM_RS11355 a530c5afde6b95a02141ba14fa8c4c82 211 PRINTS PR00127 Clp protease catalytic subunit P signature 27 42 4.9E-47 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NHAM_RS11355 a530c5afde6b95a02141ba14fa8c4c82 211 PRINTS PR00127 Clp protease catalytic subunit P signature 67 87 4.9E-47 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NHAM_RS11355 a530c5afde6b95a02141ba14fa8c4c82 211 PRINTS PR00127 Clp protease catalytic subunit P signature 98 115 4.9E-47 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NHAM_RS11355 a530c5afde6b95a02141ba14fa8c4c82 211 PRINTS PR00127 Clp protease catalytic subunit P signature 176 195 4.9E-47 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NHAM_RS11355 a530c5afde6b95a02141ba14fa8c4c82 211 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 120 133 - T 22-04-2016 IPR033135 ClpP, histidine active site NHAM_RS11355 a530c5afde6b95a02141ba14fa8c4c82 211 PANTHER PTHR10381:SF11 1 204 6.4E-136 T 22-04-2016 NHAM_RS16100 a447864cf949ffb035bac6c4f8bfd004 370 PANTHER PTHR11825 27 368 6.0E-142 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NHAM_RS16100 a447864cf949ffb035bac6c4f8bfd004 370 PIRSF PIRSF006468 13 370 1.9E-124 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 NHAM_RS16100 a447864cf949ffb035bac6c4f8bfd004 370 ProSitePatterns PS00770 Aminotransferases class-IV signature. 246 275 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 NHAM_RS16100 a447864cf949ffb035bac6c4f8bfd004 370 Gene3D G3DSA:3.30.470.10 25 187 5.0E-68 T 22-04-2016 NHAM_RS16100 a447864cf949ffb035bac6c4f8bfd004 370 SUPERFAMILY SSF56752 14 366 5.49E-110 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NHAM_RS16100 a447864cf949ffb035bac6c4f8bfd004 370 Gene3D G3DSA:3.20.10.10 188 356 3.7E-63 T 22-04-2016 NHAM_RS16100 a447864cf949ffb035bac6c4f8bfd004 370 Pfam PF01063 Amino-transferase class IV 84 325 5.8E-33 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NHAM_RS16100 a447864cf949ffb035bac6c4f8bfd004 370 PANTHER PTHR11825:SF2 27 368 6.0E-142 T 22-04-2016 NHAM_RS16100 a447864cf949ffb035bac6c4f8bfd004 370 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 58 369 3.5E-121 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 NHAM_RS06395 e3667e88c1fd40df83f0bfe438241792 476 Pfam PF06863 Protein of unknown function (DUF1254) 74 203 9.4E-51 T 22-04-2016 IPR010679 Domain of unknown function DUF1254 NHAM_RS06395 e3667e88c1fd40df83f0bfe438241792 476 Gene3D G3DSA:2.60.40.1610 86 202 8.8E-25 T 22-04-2016 IPR010679 Domain of unknown function DUF1254 NHAM_RS06395 e3667e88c1fd40df83f0bfe438241792 476 PANTHER PTHR36509:SF2 15 474 1.9E-156 T 22-04-2016 NHAM_RS06395 e3667e88c1fd40df83f0bfe438241792 476 Pfam PF06742 Protein of unknown function (DUF1214) 345 452 8.2E-35 T 22-04-2016 IPR010621 Domain of unknown function DUF1214 NHAM_RS06395 e3667e88c1fd40df83f0bfe438241792 476 Gene3D G3DSA:2.60.120.600 305 469 1.0E-57 T 22-04-2016 IPR010621 Domain of unknown function DUF1214 NHAM_RS06395 e3667e88c1fd40df83f0bfe438241792 476 PANTHER PTHR36509 15 474 1.9E-156 T 22-04-2016 NHAM_RS06395 e3667e88c1fd40df83f0bfe438241792 476 SUPERFAMILY SSF160935 10 467 7.98E-139 T 22-04-2016 NHAM_RS06395 e3667e88c1fd40df83f0bfe438241792 476 Gene3D G3DSA:1.10.3360.10 203 301 1.0E-12 T 22-04-2016 IPR023289 VPA0735-like domain NHAM_RS17320 3d1e6ad327ceeac45499cbe1a1d02447 121 PANTHER PTHR26402 2 111 3.3E-38 T 22-04-2016 NHAM_RS17320 3d1e6ad327ceeac45499cbe1a1d02447 121 SUPERFAMILY SSF52172 1 116 4.84E-36 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS17320 3d1e6ad327ceeac45499cbe1a1d02447 121 SMART SM00448 2 115 1.6E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS17320 3d1e6ad327ceeac45499cbe1a1d02447 121 Pfam PF00072 Response regulator receiver domain 5 113 2.9E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS17320 3d1e6ad327ceeac45499cbe1a1d02447 121 Gene3D G3DSA:3.40.50.2300 3 117 2.7E-35 T 22-04-2016 NHAM_RS17380 4255b528515e660b39dfcf4373f4f142 187 PANTHER PTHR30582:SF1 43 185 9.9E-59 T 22-04-2016 NHAM_RS17380 4255b528515e660b39dfcf4373f4f142 187 SUPERFAMILY SSF141523 52 186 1.31E-33 T 22-04-2016 NHAM_RS17380 4255b528515e660b39dfcf4373f4f142 187 PANTHER PTHR30582 43 185 9.9E-59 T 22-04-2016 NHAM_RS17380 4255b528515e660b39dfcf4373f4f142 187 Pfam PF03734 L,D-transpeptidase catalytic domain 58 185 3.9E-16 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NHAM_RS17380 4255b528515e660b39dfcf4373f4f142 187 Gene3D G3DSA:2.40.440.10 53 186 2.5E-35 T 22-04-2016 NHAM_RS17925 89cf4eb7490d8284766f7a34f2842fc6 140 Gene3D G3DSA:1.10.490.10 13 119 2.2E-22 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 NHAM_RS17925 89cf4eb7490d8284766f7a34f2842fc6 140 SUPERFAMILY SSF46458 12 119 8.28E-29 T 22-04-2016 IPR009050 Globin-like NHAM_RS17925 89cf4eb7490d8284766f7a34f2842fc6 140 Pfam PF01152 Bacterial-like globin 14 105 3.4E-4 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 NHAM_RS07850 d089010a985e590b044940064458179b 1399 SMART SM00663 237 516 4.5E-183 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07850 d089010a985e590b044940064458179b 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 394 487 1.1E-26 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07850 d089010a985e590b044940064458179b 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 346 400 1.1E-8 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07850 d089010a985e590b044940064458179b 1399 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1023 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS07850 d089010a985e590b044940064458179b 1399 Gene3D G3DSA:2.40.50.100 1148 1202 3.6E-9 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 PANTHER PTHR19376:SF32 5 963 0.0 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 PANTHER PTHR19376:SF32 1170 1256 0.0 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 PANTHER PTHR19376:SF32 981 1150 0.0 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 PANTHER PTHR19376:SF32 1297 1357 0.0 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 Pfam PF04998 RNA polymerase Rpb1, domain 5 762 1309 1.9E-70 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07850 d089010a985e590b044940064458179b 1399 Pfam PF04997 RNA polymerase Rpb1, domain 1 18 344 7.2E-90 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07850 d089010a985e590b044940064458179b 1399 Pfam PF04983 RNA polymerase Rpb1, domain 3 491 644 1.6E-24 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07850 d089010a985e590b044940064458179b 1399 SUPERFAMILY SSF64484 17 939 0.0 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 SUPERFAMILY SSF64484 1126 1357 0.0 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 Gene3D G3DSA:2.40.40.20 419 491 2.8E-37 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 Gene3D G3DSA:2.40.40.20 351 378 2.8E-37 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 PANTHER PTHR19376 5 963 0.0 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 PANTHER PTHR19376 1170 1256 0.0 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 PANTHER PTHR19376 981 1150 0.0 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 PANTHER PTHR19376 1297 1357 0.0 T 22-04-2016 NHAM_RS07850 d089010a985e590b044940064458179b 1399 Pfam PF05000 RNA polymerase Rpb1, domain 4 673 758 1.8E-18 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07850 d089010a985e590b044940064458179b 1399 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 16 1370 10.331 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS00560 ffcfcb9812c61a2d19ff667a6e4dfba9 280 Pfam PF03618 Kinase/pyrophosphorylase 11 267 5.7E-87 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 NHAM_RS00560 ffcfcb9812c61a2d19ff667a6e4dfba9 280 PANTHER PTHR31756:SF3 9 274 1.7E-99 T 22-04-2016 NHAM_RS00560 ffcfcb9812c61a2d19ff667a6e4dfba9 280 PANTHER PTHR31756 9 274 1.7E-99 T 22-04-2016 NHAM_RS00560 ffcfcb9812c61a2d19ff667a6e4dfba9 280 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 9 273 55.375 T 22-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein NHAM_RS00560 ffcfcb9812c61a2d19ff667a6e4dfba9 280 Gene3D G3DSA:3.40.50.300 184 275 5.5E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS20080 f783559072dfe6723497172961a889ea 278 PANTHER PTHR41251:SF1 4 261 3.3E-51 T 22-04-2016 NHAM_RS20080 f783559072dfe6723497172961a889ea 278 Pfam PF02735 Ku70/Ku80 beta-barrel domain 14 194 3.5E-32 T 22-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 NHAM_RS20080 f783559072dfe6723497172961a889ea 278 PANTHER PTHR41251 4 261 3.3E-51 T 22-04-2016 NHAM_RS20080 f783559072dfe6723497172961a889ea 278 TIGRFAM TIGR02772 Ku_bact: Ku protein 4 257 5.0E-93 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NHAM_RS20080 f783559072dfe6723497172961a889ea 278 PIRSF PIRSF006493 1 278 6.3E-103 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NHAM_RS20080 f783559072dfe6723497172961a889ea 278 SMART SM00559 55 194 8.3E-17 T 22-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 NHAM_RS20080 f783559072dfe6723497172961a889ea 278 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 3 256 31.209 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NHAM_RS20080 f783559072dfe6723497172961a889ea 278 SUPERFAMILY SSF100939 3 257 4.9E-55 T 22-04-2016 IPR016194 SPOC-like, C-terminal domain NHAM_RS20080 f783559072dfe6723497172961a889ea 278 Gene3D G3DSA:2.40.290.10 5 152 1.4E-12 T 22-04-2016 IPR016194 SPOC-like, C-terminal domain NHAM_RS00590 6f51e30ba9e7dba24cfed2934909e498 486 PANTHER PTHR30124:SF0 17 469 7.6E-155 T 22-04-2016 NHAM_RS00590 6f51e30ba9e7dba24cfed2934909e498 486 Pfam PF06725 3D domain 300 377 5.0E-25 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 NHAM_RS00590 6f51e30ba9e7dba24cfed2934909e498 486 Pfam PF03562 MltA specific insert domain 36 278 4.2E-76 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 NHAM_RS00590 6f51e30ba9e7dba24cfed2934909e498 486 Gene3D G3DSA:2.40.40.10 189 384 7.6E-51 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NHAM_RS00590 6f51e30ba9e7dba24cfed2934909e498 486 Gene3D G3DSA:2.40.40.10 24 184 6.8E-35 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NHAM_RS00590 6f51e30ba9e7dba24cfed2934909e498 486 SMART SM00925 120 278 4.3E-82 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 NHAM_RS00590 6f51e30ba9e7dba24cfed2934909e498 486 PANTHER PTHR30124 17 469 7.6E-155 T 22-04-2016 NHAM_RS00590 6f51e30ba9e7dba24cfed2934909e498 486 SUPERFAMILY SSF50685 14 382 5.93E-123 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 Gene3D G3DSA:3.90.640.10 258 323 1.0E-12 T 22-04-2016 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 PANTHER PTHR32432:SF4 11 420 1.6E-114 T 22-04-2016 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 Hamap MF_02033 Cell division protein FtsA [ftsA]. 19 440 25.271 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 Pfam PF02491 SHS2 domain inserted in FTSA 118 185 8.6E-18 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 PANTHER PTHR32432 11 420 1.6E-114 T 22-04-2016 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 Gene3D G3DSA:3.30.420.40 192 232 1.4E-15 T 22-04-2016 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 Gene3D G3DSA:3.30.420.40 7 114 1.4E-15 T 22-04-2016 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 Pfam PF14450 Cell division protein FtsA 230 396 4.4E-17 T 22-04-2016 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 SUPERFAMILY SSF53067 222 404 2.3E-35 T 22-04-2016 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 Gene3D G3DSA:3.30.420.40 233 257 8.6E-21 T 22-04-2016 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 Gene3D G3DSA:3.30.420.40 324 378 8.6E-21 T 22-04-2016 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 23 404 8.5E-90 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 SUPERFAMILY SSF53067 21 220 1.12E-43 T 22-04-2016 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 PIRSF PIRSF003101 14 440 1.7E-108 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 Gene3D G3DSA:3.30.1490.110 115 191 3.5E-17 T 22-04-2016 NHAM_RS06555 c10bd73633d9495c16e24486711aea23 440 SMART SM00842 23 219 1.3E-68 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 NHAM_RS16425 306fe04f029d0a0c477109c7e477b067 133 SUPERFAMILY SSF46626 24 124 4.51E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS16425 306fe04f029d0a0c477109c7e477b067 133 PANTHER PTHR11961 5 133 1.7E-45 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS16425 306fe04f029d0a0c477109c7e477b067 133 Gene3D G3DSA:1.10.760.10 24 126 8.5E-38 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS16425 306fe04f029d0a0c477109c7e477b067 133 PRINTS PR00604 Class IA and IB cytochrome C signature 36 43 1.0E-23 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS16425 306fe04f029d0a0c477109c7e477b067 133 PRINTS PR00604 Class IA and IB cytochrome C signature 79 95 1.0E-23 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS16425 306fe04f029d0a0c477109c7e477b067 133 PRINTS PR00604 Class IA and IB cytochrome C signature 65 75 1.0E-23 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS16425 306fe04f029d0a0c477109c7e477b067 133 PRINTS PR00604 Class IA and IB cytochrome C signature 98 108 1.0E-23 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS16425 306fe04f029d0a0c477109c7e477b067 133 PRINTS PR00604 Class IA and IB cytochrome C signature 49 64 1.0E-23 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS16425 306fe04f029d0a0c477109c7e477b067 133 PRINTS PR00604 Class IA and IB cytochrome C signature 115 123 1.0E-23 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS16425 306fe04f029d0a0c477109c7e477b067 133 PANTHER PTHR11961:SF5 5 133 1.7E-45 T 22-04-2016 NHAM_RS16425 306fe04f029d0a0c477109c7e477b067 133 Pfam PF00034 Cytochrome c 27 122 6.7E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS07435 8b3b8efd28f7b187f32c453fb8ab1c72 266 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 167 3.8E-47 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 NHAM_RS07435 8b3b8efd28f7b187f32c453fb8ab1c72 266 SUPERFAMILY SSF56176 1 167 1.11E-50 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NHAM_RS07435 8b3b8efd28f7b187f32c453fb8ab1c72 266 PANTHER PTHR11908:SF68 3 265 3.6E-87 T 22-04-2016 NHAM_RS07435 8b3b8efd28f7b187f32c453fb8ab1c72 266 PANTHER PTHR11908 3 265 3.6E-87 T 22-04-2016 NHAM_RS07435 8b3b8efd28f7b187f32c453fb8ab1c72 266 SMART SM01092 171 265 1.2E-17 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NHAM_RS07435 8b3b8efd28f7b187f32c453fb8ab1c72 266 Gene3D G3DSA:3.30.43.10 1 51 1.7E-20 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NHAM_RS07435 8b3b8efd28f7b187f32c453fb8ab1c72 266 Gene3D G3DSA:3.30.390.50 172 265 9.5E-15 T 22-04-2016 NHAM_RS07435 8b3b8efd28f7b187f32c453fb8ab1c72 266 Gene3D G3DSA:3.30.465.10 59 166 1.0E-30 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NHAM_RS07435 8b3b8efd28f7b187f32c453fb8ab1c72 266 SUPERFAMILY SSF55447 170 265 4.71E-17 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal NHAM_RS00075 ee95bc04640d3920d741ac365a89fee1 191 PIRSF PIRSF036773 1 191 3.8E-73 T 22-04-2016 NHAM_RS00075 ee95bc04640d3920d741ac365a89fee1 191 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 88 1.6E-30 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal NHAM_RS00075 ee95bc04640d3920d741ac365a89fee1 191 Pfam PF01106 NifU-like domain 123 188 2.0E-27 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 NHAM_RS00075 ee95bc04640d3920d741ac365a89fee1 191 SMART SM00932 3 88 2.3E-48 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal NHAM_RS00075 ee95bc04640d3920d741ac365a89fee1 191 SUPERFAMILY SSF110836 1 90 9.68E-30 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal NHAM_RS00075 ee95bc04640d3920d741ac365a89fee1 191 SUPERFAMILY SSF117916 111 191 6.1E-27 T 22-04-2016 NHAM_RS00075 ee95bc04640d3920d741ac365a89fee1 191 PANTHER PTHR11178:SF1 1 191 5.8E-95 T 22-04-2016 IPR017065 NFU1 iron-sulfur cluster scaffold homologue GO:0016226 NHAM_RS00075 ee95bc04640d3920d741ac365a89fee1 191 Gene3D G3DSA:3.30.1370.70 1 90 1.5E-33 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal NHAM_RS00075 ee95bc04640d3920d741ac365a89fee1 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 131 191 2.0E-29 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 NHAM_RS00075 ee95bc04640d3920d741ac365a89fee1 191 PANTHER PTHR11178 1 191 5.8E-95 T 22-04-2016 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 SUPERFAMILY SSF160996 199 347 1.83E-14 T 22-04-2016 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 PANTHER PTHR10617:SF103 5 303 3.5E-49 T 22-04-2016 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 PANTHER PTHR10617:SF103 340 409 3.5E-49 T 22-04-2016 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 Pfam PF03486 HI0933-like protein 7 401 5.7E-111 T 22-04-2016 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 SUPERFAMILY SSF51905 6 194 1.14E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 SUPERFAMILY SSF51905 347 405 1.14E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 PANTHER PTHR10617 5 303 3.5E-49 T 22-04-2016 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 PANTHER PTHR10617 340 409 3.5E-49 T 22-04-2016 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 401 4.6E-87 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 PRINTS PR00419 Adrenodoxin reductase family signature 7 29 2.3E-7 T 22-04-2016 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 PRINTS PR00419 Adrenodoxin reductase family signature 30 43 2.3E-7 T 22-04-2016 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 28 407 1.6E-152 T 22-04-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 Gene3D G3DSA:2.40.30.10 194 287 9.4E-6 T 22-04-2016 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 Gene3D G3DSA:3.50.50.60 349 404 1.5E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13060 4f43a88cb287e24a4c71ef3b5865d579 409 Gene3D G3DSA:3.50.50.60 6 192 1.5E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07785 1be379174d556191ec76c9d68b5c5732 407 SUPERFAMILY SSF55729 207 334 4.13E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS07785 1be379174d556191ec76c9d68b5c5732 407 Pfam PF13480 Acetyltransferase (GNAT) domain 205 334 1.1E-27 T 22-04-2016 NHAM_RS19125 53ecacbf9a85b1f3a644cd78de549670 260 SMART SM00382 31 219 2.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS19125 53ecacbf9a85b1f3a644cd78de549670 260 PANTHER PTHR24220:SF558 8 247 3.5E-70 T 22-04-2016 NHAM_RS19125 53ecacbf9a85b1f3a644cd78de549670 260 Pfam PF00005 ABC transporter 22 171 3.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS19125 53ecacbf9a85b1f3a644cd78de549670 260 PANTHER PTHR24220 8 247 3.5E-70 T 22-04-2016 NHAM_RS19125 53ecacbf9a85b1f3a644cd78de549670 260 Gene3D G3DSA:3.40.50.300 11 232 1.6E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19125 53ecacbf9a85b1f3a644cd78de549670 260 SUPERFAMILY SSF52540 15 226 2.31E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16500 40c16028dd5a27d8241ba242730e73d1 502 PANTHER PTHR33908:SF2 2 499 8.3E-117 T 22-04-2016 NHAM_RS16500 40c16028dd5a27d8241ba242730e73d1 502 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 221 6.8E-19 T 22-04-2016 NHAM_RS16500 40c16028dd5a27d8241ba242730e73d1 502 PANTHER PTHR33908 2 499 8.3E-117 T 22-04-2016 NHAM_RS08365 2e21770ddb330657eea90f75d6d33733 77 PIRSF PIRSF003113 1 77 5.3E-19 T 22-04-2016 IPR002634 BolA protein NHAM_RS08365 2e21770ddb330657eea90f75d6d33733 77 Pfam PF01722 BolA-like protein 27 76 4.2E-14 T 22-04-2016 IPR002634 BolA protein NHAM_RS08365 2e21770ddb330657eea90f75d6d33733 77 PANTHER PTHR12735 1 77 2.1E-14 T 22-04-2016 NHAM_RS08365 2e21770ddb330657eea90f75d6d33733 77 SUPERFAMILY SSF82657 1 77 1.7E-23 T 22-04-2016 IPR002634 BolA protein NHAM_RS08365 2e21770ddb330657eea90f75d6d33733 77 Gene3D G3DSA:3.30.300.90 1 77 1.4E-21 T 22-04-2016 IPR002634 BolA protein NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 144 157 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 Gene3D G3DSA:1.10.8.60 293 346 9.4E-22 T 22-04-2016 NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 Gene3D G3DSA:3.40.50.2300 2 118 7.1E-10 T 22-04-2016 NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 PANTHER PTHR32071:SF21 19 453 1.7E-208 T 22-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 Gene3D G3DSA:3.40.50.300 119 292 5.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 SUPERFAMILY SSF46689 333 437 1.25E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 PANTHER PTHR32071 19 453 1.7E-208 T 22-04-2016 NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 SMART SM00448 1 109 0.0021 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 Pfam PF00158 Sigma-54 interaction domain 121 286 1.8E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 SUPERFAMILY SSF52172 13 164 5.27E-15 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 Gene3D G3DSA:1.10.10.60 347 437 4.1E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 SMART SM00382 140 283 4.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 8.4E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 Pfam PF00072 Response regulator receiver domain 13 106 1.9E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 SUPERFAMILY SSF52540 119 361 9.95E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 440 9.1E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NHAM_RS03565 b2f2d060ca40cb82026366cc9650d480 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 403 420 9.1E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NHAM_RS14835 540e5b89cd822193d17e859ab70f6ca6 338 SUPERFAMILY SSF51971 273 327 3.06E-26 T 22-04-2016 NHAM_RS14835 540e5b89cd822193d17e859ab70f6ca6 338 SUPERFAMILY SSF51971 13 213 3.06E-26 T 22-04-2016 NHAM_RS14835 540e5b89cd822193d17e859ab70f6ca6 338 Pfam PF01266 FAD dependent oxidoreductase 14 321 7.1E-40 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NHAM_RS14835 540e5b89cd822193d17e859ab70f6ca6 338 SUPERFAMILY SSF54373 198 286 7.19E-18 T 22-04-2016 NHAM_RS14835 540e5b89cd822193d17e859ab70f6ca6 338 Gene3D G3DSA:3.30.9.10 182 286 7.5E-19 T 22-04-2016 NHAM_RS14835 540e5b89cd822193d17e859ab70f6ca6 338 Gene3D G3DSA:3.50.50.60 29 86 7.9E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14835 540e5b89cd822193d17e859ab70f6ca6 338 Gene3D G3DSA:3.50.50.60 136 181 7.9E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14835 540e5b89cd822193d17e859ab70f6ca6 338 PANTHER PTHR13847:SF180 14 336 1.8E-26 T 22-04-2016 NHAM_RS14835 540e5b89cd822193d17e859ab70f6ca6 338 PANTHER PTHR13847 14 336 1.8E-26 T 22-04-2016 NHAM_RS14835 540e5b89cd822193d17e859ab70f6ca6 338 Gene3D G3DSA:3.50.50.60 13 28 1.3E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS14835 540e5b89cd822193d17e859ab70f6ca6 338 Gene3D G3DSA:3.50.50.60 289 323 1.3E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 SUPERFAMILY SSF50104 120 176 1.73E-18 T 22-04-2016 IPR008991 Translation protein SH3-like domain NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 SMART SM00739 122 149 2.7E-5 T 22-04-2016 IPR005824 KOW NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 Gene3D G3DSA:3.30.70.940 3 113 7.2E-43 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 176 24.922 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 SMART SM00738 2 110 6.5E-47 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 1.0E-68 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 Gene3D G3DSA:2.30.30.30 115 176 5.2E-29 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 Pfam PF02357 Transcription termination factor nusG 3 106 3.2E-26 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 5.0E-20 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 5.0E-20 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 5.0E-20 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 PANTHER PTHR30265 1 176 3.5E-74 T 22-04-2016 NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 Pfam PF00467 KOW motif 126 155 1.3E-5 T 22-04-2016 IPR005824 KOW NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 159 168 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site NHAM_RS07815 ca1f13c309dff7d62ba8ddbf872145e3 176 SUPERFAMILY SSF82679 3 112 2.49E-38 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 NHAM_RS06795 797e5fe179af5708760c50d1350d2d99 171 Gene3D G3DSA:2.170.150.20 38 167 4.3E-58 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NHAM_RS06795 797e5fe179af5708760c50d1350d2d99 171 Pfam PF01641 SelR domain 47 165 1.6E-50 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NHAM_RS06795 797e5fe179af5708760c50d1350d2d99 171 PANTHER PTHR10173:SF18 41 165 1.4E-55 T 22-04-2016 NHAM_RS06795 797e5fe179af5708760c50d1350d2d99 171 SUPERFAMILY SSF51316 42 166 7.32E-58 T 22-04-2016 IPR011057 Mss4-like NHAM_RS06795 797e5fe179af5708760c50d1350d2d99 171 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 43 166 2.4E-51 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 NHAM_RS06795 797e5fe179af5708760c50d1350d2d99 171 PANTHER PTHR10173 41 165 1.4E-55 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 NHAM_RS06850 8f4752ecb01565be491e959d31f00d19 972 SUPERFAMILY SSF51126 13 266 6.59E-6 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS06850 8f4752ecb01565be491e959d31f00d19 972 SMART SM00869 696 958 6.5E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS06850 8f4752ecb01565be491e959d31f00d19 972 Gene3D G3DSA:2.40.128.130 648 972 9.2E-59 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS06850 8f4752ecb01565be491e959d31f00d19 972 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 519 972 1.1E-68 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 NHAM_RS06850 8f4752ecb01565be491e959d31f00d19 972 SUPERFAMILY SSF103515 672 972 1.57E-36 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS06850 8f4752ecb01565be491e959d31f00d19 972 SUPERFAMILY SSF51126 226 628 1.16E-38 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS06850 8f4752ecb01565be491e959d31f00d19 972 Pfam PF03797 Autotransporter beta-domain 697 949 3.8E-35 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS06850 8f4752ecb01565be491e959d31f00d19 972 PANTHER PTHR12338 127 972 4.2E-12 T 22-04-2016 NHAM_RS06850 8f4752ecb01565be491e959d31f00d19 972 Gene3D G3DSA:2.160.20.20 28 284 2.2E-20 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like NHAM_RS06850 8f4752ecb01565be491e959d31f00d19 972 Gene3D G3DSA:2.160.20.20 285 642 9.6E-47 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like NHAM_RS02090 c4ef780ff7711079b2a68405e41deeec 477 Gene3D G3DSA:3.40.50.300 219 379 7.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02090 c4ef780ff7711079b2a68405e41deeec 477 PANTHER PTHR24031 7 454 4.9E-189 T 22-04-2016 NHAM_RS02090 c4ef780ff7711079b2a68405e41deeec 477 Pfam PF00271 Helicase conserved C-terminal domain 238 346 7.7E-29 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS02090 c4ef780ff7711079b2a68405e41deeec 477 PANTHER PTHR24031:SF261 7 454 4.9E-189 T 22-04-2016 NHAM_RS02090 c4ef780ff7711079b2a68405e41deeec 477 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NHAM_RS02090 c4ef780ff7711079b2a68405e41deeec 477 Pfam PF00270 DEAD/DEAH box helicase 32 203 3.1E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NHAM_RS02090 c4ef780ff7711079b2a68405e41deeec 477 SMART SM00487 27 229 1.7E-57 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain NHAM_RS02090 c4ef780ff7711079b2a68405e41deeec 477 SMART SM00490 265 346 7.4E-32 T 22-04-2016 IPR001650 Helicase, C-terminal NHAM_RS02090 c4ef780ff7711079b2a68405e41deeec 477 SUPERFAMILY SSF52540 81 363 4.76E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02090 c4ef780ff7711079b2a68405e41deeec 477 Gene3D G3DSA:3.40.50.300 7 218 1.7E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07625 9a8c61350f649f9b71ee218f0d32273c 200 SUPERFAMILY SSF102405 2 180 1.02E-59 T 22-04-2016 NHAM_RS07625 9a8c61350f649f9b71ee218f0d32273c 200 PANTHER PTHR31223:SF0 1 182 7.0E-93 T 22-04-2016 NHAM_RS07625 9a8c61350f649f9b71ee218f0d32273c 200 Gene3D G3DSA:3.40.50.450 2 185 1.4E-65 T 22-04-2016 NHAM_RS07625 9a8c61350f649f9b71ee218f0d32273c 200 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 5 180 7.0E-56 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG NHAM_RS07625 9a8c61350f649f9b71ee218f0d32273c 200 PANTHER PTHR31223 1 182 7.0E-93 T 22-04-2016 NHAM_RS07625 9a8c61350f649f9b71ee218f0d32273c 200 Pfam PF03641 Possible lysine decarboxylase 49 178 1.6E-39 T 22-04-2016 IPR031100 LOG family NHAM_RS03245 16f2f4b114e0737dec8725b94a71bd52 61 SUPERFAMILY SSF57829 1 56 4.7E-19 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 NHAM_RS03245 16f2f4b114e0737dec8725b94a71bd52 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 18.109 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 NHAM_RS03245 16f2f4b114e0737dec8725b94a71bd52 61 Pfam PF01783 Ribosomal L32p protein family 2 56 9.6E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 NHAM_RS03245 16f2f4b114e0737dec8725b94a71bd52 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 56 6.0E-22 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 NHAM_RS03245 16f2f4b114e0737dec8725b94a71bd52 61 PANTHER PTHR35534 1 61 1.4E-27 T 22-04-2016 NHAM_RS19165 89c9a0a3553f6ad158a4f357930e339d 353 Gene3D G3DSA:3.40.190.10 125 252 8.6E-15 T 22-04-2016 NHAM_RS19165 89c9a0a3553f6ad158a4f357930e339d 353 Pfam PF09084 NMT1/THI5 like 52 267 2.6E-38 T 22-04-2016 IPR015168 SsuA/THI5-like NHAM_RS19165 89c9a0a3553f6ad158a4f357930e339d 353 PANTHER PTHR31528:SF3 1 351 2.4E-88 T 22-04-2016 NHAM_RS19165 89c9a0a3553f6ad158a4f357930e339d 353 SUPERFAMILY SSF53850 51 276 2.93E-31 T 22-04-2016 NHAM_RS19165 89c9a0a3553f6ad158a4f357930e339d 353 PANTHER PTHR31528 1 351 2.4E-88 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 NHAM_RS15630 8223581326c3c2293f966d71c894508c 712 Gene3D G3DSA:3.90.70.10 5 130 1.1E-20 T 22-04-2016 NHAM_RS15630 8223581326c3c2293f966d71c894508c 712 SUPERFAMILY SSF52540 465 708 1.67E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15630 8223581326c3c2293f966d71c894508c 712 SMART SM00382 497 683 9.1E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS15630 8223581326c3c2293f966d71c894508c 712 PANTHER PTHR24221 139 708 3.6E-180 T 22-04-2016 NHAM_RS15630 8223581326c3c2293f966d71c894508c 712 Gene3D G3DSA:1.20.1560.10 143 451 1.0E-75 T 22-04-2016 NHAM_RS15630 8223581326c3c2293f966d71c894508c 712 ProSitePatterns PS00211 ABC transporters family signature. 609 623 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS15630 8223581326c3c2293f966d71c894508c 712 Pfam PF03412 Peptidase C39 family 6 130 1.7E-10 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 NHAM_RS15630 8223581326c3c2293f966d71c894508c 712 SUPERFAMILY SSF90123 144 457 2.62E-59 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS15630 8223581326c3c2293f966d71c894508c 712 Pfam PF00005 ABC transporter 488 637 2.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS15630 8223581326c3c2293f966d71c894508c 712 Gene3D G3DSA:3.40.50.300 470 701 2.2E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15630 8223581326c3c2293f966d71c894508c 712 Pfam PF00664 ABC transporter transmembrane region 161 425 4.5E-34 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS08870 a46e12b5cd33badf36e688731ce7e884 635 SUPERFAMILY SSF54534 224 355 1.1E-14 T 22-04-2016 NHAM_RS08870 a46e12b5cd33badf36e688731ce7e884 635 PANTHER PTHR10657 245 526 6.5E-125 T 22-04-2016 NHAM_RS08870 a46e12b5cd33badf36e688731ce7e884 635 PANTHER PTHR10657 2 178 6.5E-125 T 22-04-2016 NHAM_RS08870 a46e12b5cd33badf36e688731ce7e884 635 Gene3D G3DSA:3.10.50.40 263 377 3.0E-17 T 22-04-2016 NHAM_RS08870 a46e12b5cd33badf36e688731ce7e884 635 Pfam PF13624 SurA N-terminal domain 1 167 2.1E-40 T 22-04-2016 NHAM_RS08870 a46e12b5cd33badf36e688731ce7e884 635 PANTHER PTHR10657:SF13 245 526 6.5E-125 T 22-04-2016 NHAM_RS08870 a46e12b5cd33badf36e688731ce7e884 635 PANTHER PTHR10657:SF13 2 178 6.5E-125 T 22-04-2016 NHAM_RS08870 a46e12b5cd33badf36e688731ce7e884 635 SUPERFAMILY SSF109998 46 171 1.73E-24 T 22-04-2016 IPR027304 Trigger factor/SurA domain NHAM_RS08870 a46e12b5cd33badf36e688731ce7e884 635 SUPERFAMILY SSF109998 245 299 1.73E-24 T 22-04-2016 IPR027304 Trigger factor/SurA domain NHAM_RS08870 a46e12b5cd33badf36e688731ce7e884 635 Pfam PF13145 PPIC-type PPIASE domain 251 369 1.4E-21 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 NHAM_RS07905 05a55debc14b481df6b98fe49770ac1c 102 PANTHER PTHR11700 4 102 9.6E-56 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07905 05a55debc14b481df6b98fe49770ac1c 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.046 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07905 05a55debc14b481df6b98fe49770ac1c 102 Gene3D G3DSA:3.30.70.600 4 102 1.7E-46 T 22-04-2016 IPR027486 Ribosomal protein S10 domain NHAM_RS07905 05a55debc14b481df6b98fe49770ac1c 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.6E-48 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07905 05a55debc14b481df6b98fe49770ac1c 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 5.4E-38 T 22-04-2016 IPR027486 Ribosomal protein S10 domain NHAM_RS07905 05a55debc14b481df6b98fe49770ac1c 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.5E-19 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07905 05a55debc14b481df6b98fe49770ac1c 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.5E-19 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07905 05a55debc14b481df6b98fe49770ac1c 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.5E-19 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07905 05a55debc14b481df6b98fe49770ac1c 102 SMART SM01403 7 101 1.3E-60 T 22-04-2016 IPR027486 Ribosomal protein S10 domain NHAM_RS07905 05a55debc14b481df6b98fe49770ac1c 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07905 05a55debc14b481df6b98fe49770ac1c 102 SUPERFAMILY SSF54999 6 102 9.81E-41 T 22-04-2016 IPR027486 Ribosomal protein S10 domain NHAM_RS03195 77c894e1acb5cce53190832934f2c966 518 Gene3D G3DSA:1.20.1250.20 269 419 5.7E-9 T 22-04-2016 NHAM_RS03195 77c894e1acb5cce53190832934f2c966 518 Pfam PF07690 Major Facilitator Superfamily 25 415 7.8E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS03195 77c894e1acb5cce53190832934f2c966 518 SUPERFAMILY SSF103473 254 425 1.12E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS03195 77c894e1acb5cce53190832934f2c966 518 SUPERFAMILY SSF103473 7 202 1.12E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS03195 77c894e1acb5cce53190832934f2c966 518 PANTHER PTHR23501:SF69 6 518 3.9E-203 T 22-04-2016 NHAM_RS03195 77c894e1acb5cce53190832934f2c966 518 PANTHER PTHR23501 6 518 3.9E-203 T 22-04-2016 NHAM_RS03195 77c894e1acb5cce53190832934f2c966 518 Gene3D G3DSA:1.20.1250.20 15 197 6.2E-33 T 22-04-2016 NHAM_RS03195 77c894e1acb5cce53190832934f2c966 518 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 495 5.6E-112 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NHAM_RS11895 380ffb5b3245b4bd27dd4fd295763f8e 455 Gene3D G3DSA:2.70.70.10 301 447 9.1E-51 T 22-04-2016 NHAM_RS11895 380ffb5b3245b4bd27dd4fd295763f8e 455 PANTHER PTHR21666 294 448 1.5E-48 T 22-04-2016 NHAM_RS11895 380ffb5b3245b4bd27dd4fd295763f8e 455 SUPERFAMILY SSF51261 313 446 8.89E-55 T 22-04-2016 IPR011055 Duplicated hybrid motif NHAM_RS11895 380ffb5b3245b4bd27dd4fd295763f8e 455 Pfam PF01551 Peptidase family M23 348 442 1.2E-34 T 22-04-2016 IPR016047 Peptidase M23 NHAM_RS23865 b4888223b28464581c6c528d3446c7a0 1030 TIGRFAM TIGR02243 TIGR02243: putative baseplate assembly protein 585 947 3.9E-58 T 22-04-2016 IPR011749 Conserved hypothetical protein CHP02243 NHAM_RS19160 1c0d4a26c5146163bdd1e8f9b50a67a0 593 SMART SM00382 370 556 7.8E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS19160 1c0d4a26c5146163bdd1e8f9b50a67a0 593 SUPERFAMILY SSF52540 338 581 1.25E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19160 1c0d4a26c5146163bdd1e8f9b50a67a0 593 Gene3D G3DSA:1.20.1560.10 9 333 4.6E-43 T 22-04-2016 NHAM_RS19160 1c0d4a26c5146163bdd1e8f9b50a67a0 593 SUPERFAMILY SSF90123 486 494 9.03E-46 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS19160 1c0d4a26c5146163bdd1e8f9b50a67a0 593 SUPERFAMILY SSF90123 10 309 9.03E-46 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS19160 1c0d4a26c5146163bdd1e8f9b50a67a0 593 Pfam PF00005 ABC transporter 362 510 1.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS19160 1c0d4a26c5146163bdd1e8f9b50a67a0 593 PANTHER PTHR24221 5 589 2.4E-176 T 22-04-2016 NHAM_RS19160 1c0d4a26c5146163bdd1e8f9b50a67a0 593 Pfam PF00664 ABC transporter transmembrane region 28 298 6.1E-34 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS19160 1c0d4a26c5146163bdd1e8f9b50a67a0 593 TIGRFAM TIGR01192 chvA: glucan exporter ATP-binding protein 1 585 3.8E-179 T 22-04-2016 IPR005896 Glucan exporter ATP-binding protein, NdvA GO:0005886|GO:0015441|GO:0015775 NHAM_RS19160 1c0d4a26c5146163bdd1e8f9b50a67a0 593 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS19160 1c0d4a26c5146163bdd1e8f9b50a67a0 593 Gene3D G3DSA:3.40.50.300 343 575 8.1E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01550 8c1df857e0e822ece005d5ac5d490c6d 216 Pfam PF01807 CHC2 zinc finger 7 94 9.3E-6 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NHAM_RS01550 8c1df857e0e822ece005d5ac5d490c6d 216 Gene3D G3DSA:3.90.580.10 5 94 1.7E-11 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NHAM_RS01550 8c1df857e0e822ece005d5ac5d490c6d 216 SUPERFAMILY SSF57783 6 94 3.23E-12 T 22-04-2016 NHAM_RS07340 f3943ad7f8e9923669376bc4c430c986 367 Gene3D G3DSA:1.25.40.10 136 350 3.5E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS07340 f3943ad7f8e9923669376bc4c430c986 367 Pfam PF13432 Tetratricopeptide repeat 159 203 0.0053 T 22-04-2016 NHAM_RS07340 f3943ad7f8e9923669376bc4c430c986 367 Pfam PF13432 Tetratricopeptide repeat 207 257 1.2E-5 T 22-04-2016 NHAM_RS07340 f3943ad7f8e9923669376bc4c430c986 367 SUPERFAMILY SSF48452 144 260 1.5E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS07340 f3943ad7f8e9923669376bc4c430c986 367 SUPERFAMILY SSF48452 299 343 1.5E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS07340 f3943ad7f8e9923669376bc4c430c986 367 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 2 116 9.4E-29 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI NHAM_RS15815 f5af9ff119c7a0d56bbf2a63217a3b87 282 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 282 7.3E-23 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS15815 f5af9ff119c7a0d56bbf2a63217a3b87 282 Pfam PF01548 Transposase 6 143 1.7E-14 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS15815 f5af9ff119c7a0d56bbf2a63217a3b87 282 PANTHER PTHR33055:SF2 2 282 8.9E-113 T 22-04-2016 NHAM_RS15815 f5af9ff119c7a0d56bbf2a63217a3b87 282 PANTHER PTHR33055 2 282 8.9E-113 T 22-04-2016 NHAM_RS15790 f5af9ff119c7a0d56bbf2a63217a3b87 282 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 282 7.3E-23 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS15790 f5af9ff119c7a0d56bbf2a63217a3b87 282 Pfam PF01548 Transposase 6 143 1.7E-14 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS15790 f5af9ff119c7a0d56bbf2a63217a3b87 282 PANTHER PTHR33055:SF2 2 282 8.9E-113 T 22-04-2016 NHAM_RS15790 f5af9ff119c7a0d56bbf2a63217a3b87 282 PANTHER PTHR33055 2 282 8.9E-113 T 22-04-2016 NHAM_RS16710 8a7e58f6bcd89d771dd7a9ccb961ec8c 301 PANTHER PTHR12905 11 226 7.6E-33 T 22-04-2016 NHAM_RS16710 8a7e58f6bcd89d771dd7a9ccb961ec8c 301 Pfam PF00149 Calcineurin-like phosphoesterase 4 226 4.6E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NHAM_RS16710 8a7e58f6bcd89d771dd7a9ccb961ec8c 301 PANTHER PTHR12905:SF17 11 226 7.6E-33 T 22-04-2016 NHAM_RS16710 8a7e58f6bcd89d771dd7a9ccb961ec8c 301 SUPERFAMILY SSF56300 4 277 9.17E-41 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS16710 8a7e58f6bcd89d771dd7a9ccb961ec8c 301 Gene3D G3DSA:3.60.21.10 4 268 3.8E-36 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS14425 d851e26c6db5590caf3eff67dcd62ee1 376 PANTHER PTHR13693 22 370 3.8E-127 T 22-04-2016 NHAM_RS14425 d851e26c6db5590caf3eff67dcd62ee1 376 SUPERFAMILY SSF53383 17 370 1.34E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS14425 d851e26c6db5590caf3eff67dcd62ee1 376 Gene3D G3DSA:3.40.640.10 45 259 4.8E-76 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS14425 d851e26c6db5590caf3eff67dcd62ee1 376 PANTHER PTHR13693:SF53 22 370 3.8E-127 T 22-04-2016 NHAM_RS14425 d851e26c6db5590caf3eff67dcd62ee1 376 Pfam PF00155 Aminotransferase class I and II 26 364 2.0E-46 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NHAM_RS14425 d851e26c6db5590caf3eff67dcd62ee1 376 Gene3D G3DSA:3.90.1150.10 260 355 1.7E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS00255 419ee98141695deaef7c3b520ac27e56 152 PANTHER PTHR11241 16 152 3.6E-48 T 22-04-2016 NHAM_RS00255 419ee98141695deaef7c3b520ac27e56 152 SUPERFAMILY SSF51283 8 152 7.46E-48 T 22-04-2016 IPR029054 dUTPase-like NHAM_RS00255 419ee98141695deaef7c3b520ac27e56 152 Gene3D G3DSA:2.70.40.10 12 152 3.2E-50 T 22-04-2016 IPR029054 dUTPase-like NHAM_RS00255 419ee98141695deaef7c3b520ac27e56 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 152 34.075 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 NHAM_RS00255 419ee98141695deaef7c3b520ac27e56 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 12 152 1.3E-53 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 NHAM_RS00255 419ee98141695deaef7c3b520ac27e56 152 Pfam PF00692 dUTPase 19 151 3.9E-31 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 NHAM_RS11915 7655848e49747a792d608c5cfc81bae5 151 SUPERFAMILY SSF102400 1 140 8.63E-40 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 NHAM_RS11915 7655848e49747a792d608c5cfc81bae5 151 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 135 2.9E-36 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 NHAM_RS11915 7655848e49747a792d608c5cfc81bae5 151 Gene3D G3DSA:3.40.50.10110 1 139 2.6E-37 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 PANTHER PTHR20856 1059 1154 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 PANTHER PTHR20856 756 943 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 PANTHER PTHR20856 1207 1371 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 PANTHER PTHR20856 354 739 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 PANTHER PTHR20856 3 238 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Pfam PF00562 RNA polymerase Rpb2, domain 6 732 1289 3.8E-167 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Gene3D G3DSA:3.90.1100.10 673 727 4.0E-150 T 22-04-2016 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Gene3D G3DSA:3.90.1100.10 459 605 4.0E-150 T 22-04-2016 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Gene3D G3DSA:3.90.1100.10 20 158 4.0E-150 T 22-04-2016 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Pfam PF04563 RNA polymerase beta subunit 28 511 1.5E-34 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 14 1367 12.443 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Gene3D G3DSA:2.40.50.100 729 805 2.5E-29 T 22-04-2016 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Pfam PF10385 RNA polymerase beta subunit external 1 domain 605 670 3.9E-26 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 SUPERFAMILY SSF64484 12 233 0.0 T 22-04-2016 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 SUPERFAMILY SSF64484 1065 1367 0.0 T 22-04-2016 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 SUPERFAMILY SSF64484 357 952 0.0 T 22-04-2016 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Gene3D G3DSA:2.40.50.150 840 950 6.0E-59 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Gene3D G3DSA:2.40.50.150 1071 1085 6.0E-59 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Gene3D G3DSA:2.40.270.10 806 833 8.7E-89 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Gene3D G3DSA:2.40.270.10 1086 1267 8.7E-89 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 10 1363 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1089 1101 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Gene3D G3DSA:2.30.150.10 606 670 1.3E-28 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 PANTHER PTHR20856:SF20 1059 1154 0.0 T 22-04-2016 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 PANTHER PTHR20856:SF20 756 943 0.0 T 22-04-2016 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 PANTHER PTHR20856:SF20 1207 1371 0.0 T 22-04-2016 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 PANTHER PTHR20856:SF20 354 739 0.0 T 22-04-2016 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 PANTHER PTHR20856:SF20 3 238 0.0 T 22-04-2016 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Gene3D G3DSA:3.90.1110.10 160 237 3.5E-69 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Gene3D G3DSA:3.90.1110.10 360 458 3.5E-69 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Pfam PF04560 RNA polymerase Rpb2, domain 7 1291 1365 1.9E-26 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Pfam PF04561 RNA polymerase Rpb2, domain 2 179 230 4.8E-6 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Pfam PF04561 RNA polymerase Rpb2, domain 2 363 468 4.8E-22 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS07845 7089b3fe8164e7d343f689bbea5b1a76 1380 Pfam PF04565 RNA polymerase Rpb2, domain 3 527 595 7.9E-32 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 NHAM_RS09455 0b6264c2e17a2b457d8b8f1ee29885ee 327 PANTHER PTHR30097 56 327 6.1E-59 T 22-04-2016 NHAM_RS09455 0b6264c2e17a2b457d8b8f1ee29885ee 327 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 132 241 1.8E-26 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS09455 0b6264c2e17a2b457d8b8f1ee29885ee 327 PANTHER PTHR30097:SF4 56 327 6.1E-59 T 22-04-2016 NHAM_RS09455 0b6264c2e17a2b457d8b8f1ee29885ee 327 Gene3D G3DSA:2.40.50.100 97 167 1.9E-11 T 22-04-2016 NHAM_RS09455 0b6264c2e17a2b457d8b8f1ee29885ee 327 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 137 312 9.5E-29 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS09455 0b6264c2e17a2b457d8b8f1ee29885ee 327 SUPERFAMILY SSF111369 94 246 1.57E-14 T 22-04-2016 NHAM_RS07935 0732c1bdf9f96a4e1b864c68fad94551 128 SUPERFAMILY SSF54843 6 123 1.28E-40 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07935 0732c1bdf9f96a4e1b864c68fad94551 128 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 17 119 2.0E-33 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 NHAM_RS07935 0732c1bdf9f96a4e1b864c68fad94551 128 Pfam PF00237 Ribosomal protein L22p/L17e 20 119 1.9E-29 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07935 0732c1bdf9f96a4e1b864c68fad94551 128 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 25.239 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 NHAM_RS07935 0732c1bdf9f96a4e1b864c68fad94551 128 Gene3D G3DSA:3.90.470.10 14 123 7.2E-41 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07935 0732c1bdf9f96a4e1b864c68fad94551 128 PANTHER PTHR13501 3 126 8.4E-45 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 NHAM_RS07760 721db61f838671bc13a32a5328731613 156 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 19 140 2.5E-49 T 22-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 NHAM_RS07760 721db61f838671bc13a32a5328731613 156 PANTHER PTHR30558 1 147 7.6E-65 T 22-04-2016 NHAM_RS07760 721db61f838671bc13a32a5328731613 156 Pfam PF02472 Biopolymer transport protein ExbD/TolR 19 138 1.5E-23 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NHAM_RS07760 721db61f838671bc13a32a5328731613 156 PANTHER PTHR30558:SF9 1 147 7.6E-65 T 22-04-2016 NHAM_RS00890 00620b7df0e158d9ea305219615892b6 228 Gene3D G3DSA:2.60.450.10 53 202 7.2E-41 T 22-04-2016 NHAM_RS00890 00620b7df0e158d9ea305219615892b6 228 Pfam PF03968 OstA-like protein 61 190 5.7E-24 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal NHAM_RS00890 00620b7df0e158d9ea305219615892b6 228 PANTHER PTHR36504 25 104 4.7E-45 T 22-04-2016 NHAM_RS00890 00620b7df0e158d9ea305219615892b6 228 PANTHER PTHR36504 129 227 4.7E-45 T 22-04-2016 NHAM_RS01940 1b53dc6eb8e45f37ffb65498e4e8b941 669 PANTHER PTHR12338 33 669 1.0E-16 T 22-04-2016 NHAM_RS01940 1b53dc6eb8e45f37ffb65498e4e8b941 669 Gene3D G3DSA:2.40.128.130 345 669 4.0E-59 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS01940 1b53dc6eb8e45f37ffb65498e4e8b941 669 SMART SM00869 393 655 6.5E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS01940 1b53dc6eb8e45f37ffb65498e4e8b941 669 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 216 669 4.0E-69 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 NHAM_RS01940 1b53dc6eb8e45f37ffb65498e4e8b941 669 Gene3D G3DSA:2.160.20.20 4 339 7.2E-48 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like NHAM_RS01940 1b53dc6eb8e45f37ffb65498e4e8b941 669 Pfam PF03797 Autotransporter beta-domain 394 646 1.8E-35 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS01940 1b53dc6eb8e45f37ffb65498e4e8b941 669 SUPERFAMILY SSF51126 2 325 1.29E-38 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS01940 1b53dc6eb8e45f37ffb65498e4e8b941 669 SUPERFAMILY SSF103515 368 669 6.15E-37 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS00970 30986c6aa0c8654f97e45a296d5b1008 327 PANTHER PTHR35008 41 314 4.5E-70 T 22-04-2016 NHAM_RS00970 30986c6aa0c8654f97e45a296d5b1008 327 SUPERFAMILY SSF46626 180 286 3.87E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS00970 30986c6aa0c8654f97e45a296d5b1008 327 PANTHER PTHR35008:SF4 41 314 4.5E-70 T 22-04-2016 NHAM_RS00970 30986c6aa0c8654f97e45a296d5b1008 327 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 192 274 1.7E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS00970 30986c6aa0c8654f97e45a296d5b1008 327 Gene3D G3DSA:1.10.760.10 188 294 4.8E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS00970 30986c6aa0c8654f97e45a296d5b1008 327 Gene3D G3DSA:1.10.760.10 64 175 7.4E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS00970 30986c6aa0c8654f97e45a296d5b1008 327 SUPERFAMILY SSF46626 66 173 1.85E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS01015 1572f93399a89ff0301cc0c5ab36c824 306 Gene3D G3DSA:3.40.190.10 178 261 9.9E-17 T 22-04-2016 NHAM_RS01015 1572f93399a89ff0301cc0c5ab36c824 306 SMART SM00062 76 304 2.8E-51 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NHAM_RS01015 1572f93399a89ff0301cc0c5ab36c824 306 PANTHER PTHR18966:SF216 51 301 8.9E-95 T 22-04-2016 NHAM_RS01015 1572f93399a89ff0301cc0c5ab36c824 306 SMART SM00079 76 300 8.4E-4 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 NHAM_RS01015 1572f93399a89ff0301cc0c5ab36c824 306 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 77 302 4.7E-52 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NHAM_RS01015 1572f93399a89ff0301cc0c5ab36c824 306 SUPERFAMILY SSF53850 71 302 5.64E-56 T 22-04-2016 NHAM_RS01015 1572f93399a89ff0301cc0c5ab36c824 306 PANTHER PTHR18966 51 301 8.9E-95 T 22-04-2016 NHAM_RS01015 1572f93399a89ff0301cc0c5ab36c824 306 Gene3D G3DSA:3.40.190.10 76 162 2.3E-35 T 22-04-2016 NHAM_RS01015 1572f93399a89ff0301cc0c5ab36c824 306 Gene3D G3DSA:3.40.190.10 263 302 2.3E-35 T 22-04-2016 NHAM_RS03405 57e47d23bef8297101c8e291556ab59b 428 Gene3D G3DSA:3.40.50.10180 8 246 2.3E-84 T 22-04-2016 NHAM_RS03405 57e47d23bef8297101c8e291556ab59b 428 PANTHER PTHR12227 5 428 8.0E-129 T 22-04-2016 NHAM_RS03405 57e47d23bef8297101c8e291556ab59b 428 Gene3D G3DSA:3.40.1480.10 247 426 2.9E-57 T 22-04-2016 IPR007835 MOFRL domain NHAM_RS03405 57e47d23bef8297101c8e291556ab59b 428 Pfam PF05161 MOFRL family 311 419 8.0E-34 T 22-04-2016 IPR007835 MOFRL domain NHAM_RS03405 57e47d23bef8297101c8e291556ab59b 428 PANTHER PTHR12227:SF0 5 428 8.0E-129 T 22-04-2016 NHAM_RS03405 57e47d23bef8297101c8e291556ab59b 428 Pfam PF13660 Domain of unknown function (DUF4147) 8 235 8.5E-72 T 22-04-2016 IPR025286 MOFRL-associated domain NHAM_RS03405 57e47d23bef8297101c8e291556ab59b 428 SUPERFAMILY SSF82544 1 425 4.05E-129 T 22-04-2016 NHAM_RS07520 4a04b26917babab81e97be7ec179efe2 378 ProSitePatterns PS01215 Mrp family signature. 231 247 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 NHAM_RS07520 4a04b26917babab81e97be7ec179efe2 378 Pfam PF01883 Domain of unknown function DUF59 6 75 2.5E-12 T 22-04-2016 IPR002744 Domain of unknown function DUF59 NHAM_RS07520 4a04b26917babab81e97be7ec179efe2 378 SUPERFAMILY SSF117916 3 90 4.9E-11 T 22-04-2016 NHAM_RS07520 4a04b26917babab81e97be7ec179efe2 378 PANTHER PTHR23264 96 371 1.7E-151 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein NHAM_RS07520 4a04b26917babab81e97be7ec179efe2 378 SUPERFAMILY SSF52540 128 372 2.13E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07520 4a04b26917babab81e97be7ec179efe2 378 Hamap MF_02040 Iron-sulfur cluster carrier protein. 120 368 37.842 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein NHAM_RS07520 4a04b26917babab81e97be7ec179efe2 378 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 125 367 1.2E-101 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein NHAM_RS07520 4a04b26917babab81e97be7ec179efe2 378 Gene3D G3DSA:3.40.50.300 119 366 5.6E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16465 7cc9ea012a44101ef67c2a371726f77e 262 SUPERFAMILY SSF53335 23 200 1.72E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS16465 7cc9ea012a44101ef67c2a371726f77e 262 PANTHER PTHR18895:SF75 25 241 1.6E-54 T 22-04-2016 NHAM_RS16465 7cc9ea012a44101ef67c2a371726f77e 262 PANTHER PTHR18895 25 241 1.6E-54 T 22-04-2016 NHAM_RS16465 7cc9ea012a44101ef67c2a371726f77e 262 Pfam PF05175 Methyltransferase small domain 34 177 1.7E-12 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 NHAM_RS16465 7cc9ea012a44101ef67c2a371726f77e 262 Gene3D G3DSA:3.40.50.150 32 244 4.1E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS16465 7cc9ea012a44101ef67c2a371726f77e 262 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 122 128 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NHAM_RS07460 9b188da0ae6635f609d37b6eb89a73bd 831 Gene3D G3DSA:3.40.50.2000 500 813 9.4E-121 T 22-04-2016 NHAM_RS07460 9b188da0ae6635f609d37b6eb89a73bd 831 SUPERFAMILY SSF53756 30 828 4.08E-299 T 22-04-2016 NHAM_RS07460 9b188da0ae6635f609d37b6eb89a73bd 831 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 674 686 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 NHAM_RS07460 9b188da0ae6635f609d37b6eb89a73bd 831 PIRSF PIRSF000460 26 831 2.4E-225 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 NHAM_RS07460 9b188da0ae6635f609d37b6eb89a73bd 831 PANTHER PTHR11468:SF3 29 828 0.0 T 22-04-2016 NHAM_RS07460 9b188da0ae6635f609d37b6eb89a73bd 831 PANTHER PTHR11468 29 828 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 NHAM_RS07460 9b188da0ae6635f609d37b6eb89a73bd 831 Gene3D G3DSA:3.40.50.2000 29 499 2.4E-189 T 22-04-2016 NHAM_RS07460 9b188da0ae6635f609d37b6eb89a73bd 831 Pfam PF00343 Carbohydrate phosphorylase 118 828 4.1E-299 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 NHAM_RS07460 9b188da0ae6635f609d37b6eb89a73bd 831 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 30 828 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 Pfam PF13180 PDZ domain 104 184 6.1E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 SUPERFAMILY SSF52096 196 377 6.3E-86 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 SUPERFAMILY SSF52096 41 122 6.3E-86 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 Gene3D G3DSA:3.90.226.10 187 372 2.2E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 Gene3D G3DSA:3.90.226.10 406 426 2.2E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 Gene3D G3DSA:3.30.750.44 47 109 8.8E-10 T 22-04-2016 NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 SMART SM00228 104 175 3.0E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 Pfam PF03572 Peptidase family S41 202 369 5.9E-60 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 PANTHER PTHR32060 59 380 1.6E-120 T 22-04-2016 NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 56 373 2.7E-107 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 SMART SM00245 177 370 3.9E-84 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 SUPERFAMILY SSF50156 92 187 5.8E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS02730 1641d674a663ddfee9f70939952a3c09 451 Gene3D G3DSA:2.30.42.10 110 186 1.7E-28 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS13055 931c10323e250718ec83e995e7eafc84 604 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS13055 931c10323e250718ec83e995e7eafc84 604 SUPERFAMILY SSF52540 277 495 2.18E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13055 931c10323e250718ec83e995e7eafc84 604 Gene3D G3DSA:3.40.50.300 281 500 7.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13055 931c10323e250718ec83e995e7eafc84 604 Gene3D G3DSA:3.40.50.300 4 199 2.6E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13055 931c10323e250718ec83e995e7eafc84 604 PANTHER PTHR19211:SF45 5 530 1.2E-175 T 22-04-2016 NHAM_RS13055 931c10323e250718ec83e995e7eafc84 604 Pfam PF16326 ABC transporter C-terminal domain 527 595 1.7E-16 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 NHAM_RS13055 931c10323e250718ec83e995e7eafc84 604 PANTHER PTHR19211 5 530 1.2E-175 T 22-04-2016 NHAM_RS13055 931c10323e250718ec83e995e7eafc84 604 SMART SM00382 307 479 5.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS13055 931c10323e250718ec83e995e7eafc84 604 SMART SM00382 30 193 9.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS13055 931c10323e250718ec83e995e7eafc84 604 Pfam PF00005 ABC transporter 298 433 5.4E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS13055 931c10323e250718ec83e995e7eafc84 604 Pfam PF00005 ABC transporter 21 148 1.4E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS13055 931c10323e250718ec83e995e7eafc84 604 SUPERFAMILY SSF52540 3 201 1.26E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15640 0cf05983d029451987a956a8d92bc1e6 296 Gene3D G3DSA:3.40.50.150 65 258 2.1E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS15640 0cf05983d029451987a956a8d92bc1e6 296 PANTHER PTHR10108:SF917 56 194 6.1E-20 T 22-04-2016 NHAM_RS15640 0cf05983d029451987a956a8d92bc1e6 296 PANTHER PTHR10108 56 194 6.1E-20 T 22-04-2016 NHAM_RS15640 0cf05983d029451987a956a8d92bc1e6 296 Pfam PF13649 Methyltransferase domain 80 191 5.7E-14 T 22-04-2016 NHAM_RS15640 0cf05983d029451987a956a8d92bc1e6 296 SUPERFAMILY SSF53335 54 262 8.66E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS01965 ad54136d331706aa8872680719de78bc 258 Pfam PF02348 Cytidylyltransferase 8 218 1.5E-40 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 NHAM_RS01965 ad54136d331706aa8872680719de78bc 258 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 4 244 34.551 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 NHAM_RS01965 ad54136d331706aa8872680719de78bc 258 Gene3D G3DSA:3.90.550.10 6 244 1.3E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS01965 ad54136d331706aa8872680719de78bc 258 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 7 237 6.6E-62 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 NHAM_RS01965 ad54136d331706aa8872680719de78bc 258 PANTHER PTHR21485:SF4 5 256 2.3E-92 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 NHAM_RS01965 ad54136d331706aa8872680719de78bc 258 PANTHER PTHR21485 5 256 2.3E-92 T 22-04-2016 NHAM_RS01965 ad54136d331706aa8872680719de78bc 258 SUPERFAMILY SSF53448 6 245 7.74E-55 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS09470 cc50e892a473357997412a58f772aaaa 136 Pfam PF13115 YtkA-like 29 115 1.7E-25 T 22-04-2016 IPR032693 YtkA-like domain NHAM_RS03930 a6b6bf8c5f35f9a16e14c83bea1aefcc 542 Gene3D G3DSA:3.40.50.980 12 187 1.9E-29 T 22-04-2016 NHAM_RS03930 a6b6bf8c5f35f9a16e14c83bea1aefcc 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 22-04-2016 IPR020845 AMP-binding, conserved site NHAM_RS03930 a6b6bf8c5f35f9a16e14c83bea1aefcc 542 Gene3D G3DSA:2.30.38.10 359 432 4.4E-14 T 22-04-2016 NHAM_RS03930 a6b6bf8c5f35f9a16e14c83bea1aefcc 542 Gene3D G3DSA:3.30.300.30 433 532 5.7E-25 T 22-04-2016 NHAM_RS03930 a6b6bf8c5f35f9a16e14c83bea1aefcc 542 Pfam PF00501 AMP-binding enzyme 18 438 2.7E-84 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NHAM_RS03930 a6b6bf8c5f35f9a16e14c83bea1aefcc 542 SUPERFAMILY SSF56801 5 535 6.41E-128 T 22-04-2016 NHAM_RS03930 a6b6bf8c5f35f9a16e14c83bea1aefcc 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 522 1.2E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain NHAM_RS03930 a6b6bf8c5f35f9a16e14c83bea1aefcc 542 PANTHER PTHR24096 1 535 1.7E-261 T 22-04-2016 NHAM_RS03930 a6b6bf8c5f35f9a16e14c83bea1aefcc 542 PANTHER PTHR24096:SF53 1 535 1.7E-261 T 22-04-2016 NHAM_RS03930 a6b6bf8c5f35f9a16e14c83bea1aefcc 542 Gene3D G3DSA:3.40.50.980 188 336 8.8E-35 T 22-04-2016 NHAM_RS15560 62de1255e21c9dda65fbd3f169e1c63d 440 Gene3D G3DSA:3.40.50.2000 170 340 1.2E-8 T 22-04-2016 NHAM_RS15560 62de1255e21c9dda65fbd3f169e1c63d 440 PANTHER PTHR12526 5 370 1.0E-17 T 22-04-2016 NHAM_RS15560 62de1255e21c9dda65fbd3f169e1c63d 440 SUPERFAMILY SSF53756 8 369 2.13E-37 T 22-04-2016 NHAM_RS15560 62de1255e21c9dda65fbd3f169e1c63d 440 Pfam PF13692 Glycosyl transferases group 1 184 295 1.8E-8 T 22-04-2016 NHAM_RS07950 56eedcd6da37ab54bbe496b109d1721c 68 Gene3D G3DSA:1.10.287.310 4 63 1.4E-27 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07950 56eedcd6da37ab54bbe496b109d1721c 68 ProSitePatterns PS00579 Ribosomal protein L29 signature. 42 56 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07950 56eedcd6da37ab54bbe496b109d1721c 68 Pfam PF00831 Ribosomal L29 protein 7 63 1.3E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07950 56eedcd6da37ab54bbe496b109d1721c 68 PANTHER PTHR10916 1 67 4.8E-27 T 22-04-2016 NHAM_RS07950 56eedcd6da37ab54bbe496b109d1721c 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 4 63 17.77 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07950 56eedcd6da37ab54bbe496b109d1721c 68 PANTHER PTHR10916:SF0 1 67 4.8E-27 T 22-04-2016 NHAM_RS07950 56eedcd6da37ab54bbe496b109d1721c 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 8 63 4.9E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07950 56eedcd6da37ab54bbe496b109d1721c 68 SUPERFAMILY SSF46561 3 64 1.96E-21 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS03140 3721868dde4108c74d549c5293dee878 159 Pfam PF05099 Tellurite resistance protein TerB 19 145 6.8E-36 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal NHAM_RS03140 3721868dde4108c74d549c5293dee878 159 SUPERFAMILY SSF158682 21 148 5.49E-24 T 22-04-2016 IPR029024 TerB-like NHAM_RS03140 3721868dde4108c74d549c5293dee878 159 Gene3D G3DSA:1.10.3680.10 29 149 2.1E-14 T 22-04-2016 IPR029024 TerB-like NHAM_RS02460 a9ff6e07b9b6bcf8612564c000f34891 299 PANTHER PTHR22911 7 296 1.1E-96 T 22-04-2016 NHAM_RS02460 a9ff6e07b9b6bcf8612564c000f34891 299 PANTHER PTHR22911:SF65 7 296 1.1E-96 T 22-04-2016 NHAM_RS02460 a9ff6e07b9b6bcf8612564c000f34891 299 Pfam PF00892 EamA-like transporter family 158 297 3.3E-6 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NHAM_RS02460 a9ff6e07b9b6bcf8612564c000f34891 299 Pfam PF00892 EamA-like transporter family 14 143 3.8E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NHAM_RS02460 a9ff6e07b9b6bcf8612564c000f34891 299 SUPERFAMILY SSF103481 42 147 4.45E-10 T 22-04-2016 NHAM_RS02460 a9ff6e07b9b6bcf8612564c000f34891 299 SUPERFAMILY SSF103481 209 297 9.42E-6 T 22-04-2016 NHAM_RS08510 df131bbc9b08b770e6e576a95e58b2cf 238 SUPERFAMILY SSF56925 41 232 4.63E-31 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS08510 df131bbc9b08b770e6e576a95e58b2cf 238 PANTHER PTHR34001 1 238 1.6E-71 T 22-04-2016 NHAM_RS08510 df131bbc9b08b770e6e576a95e58b2cf 238 Pfam PF13505 Outer membrane protein beta-barrel domain 7 228 2.6E-20 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel NHAM_RS08510 df131bbc9b08b770e6e576a95e58b2cf 238 Gene3D G3DSA:2.40.160.20 42 229 1.0E-36 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS17495 420a8d7f7a9885584ef64d6c206492d5 127 PANTHER PTHR30432 14 118 6.2E-21 T 22-04-2016 NHAM_RS17495 420a8d7f7a9885584ef64d6c206492d5 127 Gene3D G3DSA:1.10.10.10 11 121 9.7E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS17495 420a8d7f7a9885584ef64d6c206492d5 127 SUPERFAMILY SSF46785 12 109 5.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS17495 420a8d7f7a9885584ef64d6c206492d5 127 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 29 89 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS18910 19e2fb948690a225d1fc92f21b2d8c0b 460 SUPERFAMILY SSF53850 48 447 1.47E-64 T 22-04-2016 NHAM_RS18910 19e2fb948690a225d1fc92f21b2d8c0b 460 Gene3D G3DSA:3.40.190.10 92 184 5.4E-8 T 22-04-2016 NHAM_RS18910 19e2fb948690a225d1fc92f21b2d8c0b 460 Pfam PF13416 Bacterial extracellular solute-binding protein 67 376 2.3E-29 T 22-04-2016 NHAM_RS18910 19e2fb948690a225d1fc92f21b2d8c0b 460 PANTHER PTHR30061 9 457 1.6E-145 T 22-04-2016 NHAM_RS18910 19e2fb948690a225d1fc92f21b2d8c0b 460 Gene3D G3DSA:3.40.190.10 185 372 4.1E-29 T 22-04-2016 NHAM_RS18910 19e2fb948690a225d1fc92f21b2d8c0b 460 PANTHER PTHR30061:SF7 9 457 1.6E-145 T 22-04-2016 NHAM_RS14325 3dd632439f9fdfc9b531a1d4dbaadef4 62 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 7 59 2.4E-11 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 NHAM_RS14325 3dd632439f9fdfc9b531a1d4dbaadef4 62 Gene3D G3DSA:1.10.150.130 15 58 1.2E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS00630 bb0807cae93febee6ab9a564cfe322fd 258 Gene3D G3DSA:3.20.20.70 5 256 1.0E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS00630 bb0807cae93febee6ab9a564cfe322fd 258 SUPERFAMILY SSF51366 1 255 2.9E-83 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NHAM_RS00630 bb0807cae93febee6ab9a564cfe322fd 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 255 5.4E-107 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 NHAM_RS00630 bb0807cae93febee6ab9a564cfe322fd 258 Pfam PF00977 Histidine biosynthesis protein 5 239 5.1E-90 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 NHAM_RS00630 bb0807cae93febee6ab9a564cfe322fd 258 PANTHER PTHR21235:SF2 1 258 2.3E-125 T 22-04-2016 NHAM_RS00630 bb0807cae93febee6ab9a564cfe322fd 258 PANTHER PTHR21235 1 258 2.3E-125 T 22-04-2016 NHAM_RS00630 bb0807cae93febee6ab9a564cfe322fd 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 47.57 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 NHAM_RS02155 845aad35e51bb945db6a2c3c2a7443e8 197 PANTHER PTHR10681:SF107 16 186 1.6E-48 T 22-04-2016 NHAM_RS02155 845aad35e51bb945db6a2c3c2a7443e8 197 ProSitePatterns PS00194 Thioredoxin family active site. 84 102 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NHAM_RS02155 845aad35e51bb945db6a2c3c2a7443e8 197 Gene3D G3DSA:3.40.30.10 21 191 7.5E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS02155 845aad35e51bb945db6a2c3c2a7443e8 197 PANTHER PTHR10681 16 186 1.6E-48 T 22-04-2016 NHAM_RS02155 845aad35e51bb945db6a2c3c2a7443e8 197 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 18 191 8.6E-47 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 NHAM_RS02155 845aad35e51bb945db6a2c3c2a7443e8 197 SUPERFAMILY SSF52833 52 189 6.43E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS02155 845aad35e51bb945db6a2c3c2a7443e8 197 Pfam PF08534 Redoxin 65 185 2.7E-13 T 22-04-2016 IPR013740 Redoxin GO:0016491 NHAM_RS11610 a8d3f7cb7e20e3f23dd888ae2152fe7a 163 SMART SM00732 19 119 2.3E-32 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 NHAM_RS11610 a8d3f7cb7e20e3f23dd888ae2152fe7a 163 Pfam PF03652 Holliday junction resolvase 21 151 1.9E-40 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 NHAM_RS11610 a8d3f7cb7e20e3f23dd888ae2152fe7a 163 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 23 151 2.5E-33 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 NHAM_RS11610 a8d3f7cb7e20e3f23dd888ae2152fe7a 163 PANTHER PTHR33317 15 158 2.0E-43 T 22-04-2016 NHAM_RS11610 a8d3f7cb7e20e3f23dd888ae2152fe7a 163 SUPERFAMILY SSF53098 19 152 1.67E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS11610 a8d3f7cb7e20e3f23dd888ae2152fe7a 163 Gene3D G3DSA:3.30.420.140 19 154 2.0E-48 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 NHAM_RS11610 a8d3f7cb7e20e3f23dd888ae2152fe7a 163 PANTHER PTHR33317:SF1 15 158 2.0E-43 T 22-04-2016 NHAM_RS11610 a8d3f7cb7e20e3f23dd888ae2152fe7a 163 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 19 154 23.181 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 NHAM_RS02410 9ba175e9b84a87696c298d558a20ae58 134 SUPERFAMILY SSF51182 3 133 5.63E-51 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS02410 9ba175e9b84a87696c298d558a20ae58 134 Gene3D G3DSA:2.60.120.10 3 133 4.9E-52 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS02410 9ba175e9b84a87696c298d558a20ae58 134 Pfam PF06172 Cupin superfamily (DUF985) 7 133 1.5E-46 T 22-04-2016 IPR009327 Cupin domain of unknown function DUF985 NHAM_RS02410 9ba175e9b84a87696c298d558a20ae58 134 PANTHER PTHR33387 1 134 2.7E-46 T 22-04-2016 NHAM_RS16130 9f51792579b45308a0366fd34637b02a 205 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 87 1.3E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NHAM_RS16130 9f51792579b45308a0366fd34637b02a 205 PANTHER PTHR14269 16 200 5.5E-46 T 22-04-2016 NHAM_RS16130 9f51792579b45308a0366fd34637b02a 205 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 15 199 8.9E-46 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 NHAM_RS16130 9f51792579b45308a0366fd34637b02a 205 PIRSF PIRSF000847 11 205 7.3E-45 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 NHAM_RS16130 9f51792579b45308a0366fd34637b02a 205 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 65 87 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 PANTHER PTHR22807:SF30 53 449 8.7E-87 T 22-04-2016 NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 PANTHER PTHR22807 53 449 8.7E-87 T 22-04-2016 NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 320 332 5.8E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 227 241 5.8E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 432 449 5.8E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 256 266 5.8E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 370 386 5.8E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 Gene3D G3DSA:3.40.50.150 237 449 9.7E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 Gene3D G3DSA:1.10.940.10 15 163 2.2E-33 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 Pfam PF01029 NusB family 16 143 5.9E-18 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 SUPERFAMILY SSF48013 17 163 2.29E-25 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 SUPERFAMILY SSF53335 159 449 2.32E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS00990 465eb35a9a9514dbde8f2e763e4da3e0 450 Pfam PF01189 16S rRNA methyltransferase RsmB/F 253 447 9.5E-48 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS20070 36857291e214754b1dbe15e40240b2e0 226 SUPERFAMILY SSF56784 8 207 2.98E-46 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS20070 36857291e214754b1dbe15e40240b2e0 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 190 5.3E-32 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS20070 36857291e214754b1dbe15e40240b2e0 226 PANTHER PTHR18901:SF33 1 203 8.1E-102 T 22-04-2016 NHAM_RS20070 36857291e214754b1dbe15e40240b2e0 226 Gene3D G3DSA:3.40.50.1000 8 190 2.2E-31 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS20070 36857291e214754b1dbe15e40240b2e0 226 PANTHER PTHR18901 1 203 8.1E-102 T 22-04-2016 NHAM_RS20070 36857291e214754b1dbe15e40240b2e0 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 183 7.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NHAM_RS18990 50e1778e8eb55386b2f41ddb6c2cdf22 217 Gene3D G3DSA:3.40.50.300 34 212 1.2E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18990 50e1778e8eb55386b2f41ddb6c2cdf22 217 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 22 208 1.8E-60 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 NHAM_RS18990 50e1778e8eb55386b2f41ddb6c2cdf22 217 PANTHER PTHR11649 8 217 7.9E-53 T 22-04-2016 NHAM_RS18990 50e1778e8eb55386b2f41ddb6c2cdf22 217 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 26 212 24.773 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 NHAM_RS18990 50e1778e8eb55386b2f41ddb6c2cdf22 217 SUPERFAMILY SSF52540 23 212 2.61E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18990 50e1778e8eb55386b2f41ddb6c2cdf22 217 Pfam PF01926 50S ribosome-binding GTPase 40 160 7.6E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS09215 2a4f72b68529cb14e87052a5523e4782 287 PANTHER PTHR21181 10 286 1.6E-113 T 22-04-2016 NHAM_RS09215 2a4f72b68529cb14e87052a5523e4782 287 PANTHER PTHR21181:SF18 10 286 1.6E-113 T 22-04-2016 NHAM_RS09215 2a4f72b68529cb14e87052a5523e4782 287 Pfam PF00494 Squalene/phytoene synthase 18 268 1.2E-50 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 NHAM_RS09215 2a4f72b68529cb14e87052a5523e4782 287 Gene3D G3DSA:1.10.600.10 8 281 2.3E-22 T 22-04-2016 IPR008949 Isoprenoid synthase domain NHAM_RS09215 2a4f72b68529cb14e87052a5523e4782 287 SUPERFAMILY SSF48576 10 285 1.41E-58 T 22-04-2016 IPR008949 Isoprenoid synthase domain NHAM_RS09025 b540bd6918b92687d5523fceeffafe5b 165 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 164 29.97 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NHAM_RS09025 b540bd6918b92687d5523fceeffafe5b 165 Pfam PF01467 Cytidylyltransferase-like 6 139 2.9E-12 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NHAM_RS09025 b540bd6918b92687d5523fceeffafe5b 165 Gene3D G3DSA:3.40.50.620 1 163 2.9E-45 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS09025 b540bd6918b92687d5523fceeffafe5b 165 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 57 1.0E-14 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NHAM_RS09025 b540bd6918b92687d5523fceeffafe5b 165 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 163 5.5E-49 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NHAM_RS09025 b540bd6918b92687d5523fceeffafe5b 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 118 140 1.3E-25 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NHAM_RS09025 b540bd6918b92687d5523fceeffafe5b 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 91 107 1.3E-25 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NHAM_RS09025 b540bd6918b92687d5523fceeffafe5b 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.3E-25 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NHAM_RS09025 b540bd6918b92687d5523fceeffafe5b 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.3E-25 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 NHAM_RS09025 b540bd6918b92687d5523fceeffafe5b 165 SUPERFAMILY SSF52374 3 161 1.53E-37 T 22-04-2016 NHAM_RS09025 b540bd6918b92687d5523fceeffafe5b 165 PANTHER PTHR21342 1 164 2.4E-54 T 22-04-2016 NHAM_RS09025 b540bd6918b92687d5523fceeffafe5b 165 PANTHER PTHR21342:SF1 1 164 2.4E-54 T 22-04-2016 NHAM_RS07955 c1cdc478a77c5c84c6efbec3a47d4020 82 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 1 79 23.733 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07955 c1cdc478a77c5c84c6efbec3a47d4020 82 SUPERFAMILY SSF50249 3 75 1.29E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS07955 c1cdc478a77c5c84c6efbec3a47d4020 82 ProSitePatterns PS00056 Ribosomal protein S17 signature. 54 66 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07955 c1cdc478a77c5c84c6efbec3a47d4020 82 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 74 1.2E-34 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07955 c1cdc478a77c5c84c6efbec3a47d4020 82 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 8.0E-38 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07955 c1cdc478a77c5c84c6efbec3a47d4020 82 PANTHER PTHR10744 1 75 8.6E-36 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07955 c1cdc478a77c5c84c6efbec3a47d4020 82 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 2.3E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07955 c1cdc478a77c5c84c6efbec3a47d4020 82 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 2.3E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07955 c1cdc478a77c5c84c6efbec3a47d4020 82 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 2.3E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07955 c1cdc478a77c5c84c6efbec3a47d4020 82 Pfam PF00366 Ribosomal protein S17 8 74 5.3E-32 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07955 c1cdc478a77c5c84c6efbec3a47d4020 82 Gene3D G3DSA:2.40.50.140 1 79 4.3E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10135 a4672e3f3cdafca5b56d85c1dcd16a0e 155 PANTHER PTHR21340:SF1 1 101 2.6E-36 T 22-04-2016 NHAM_RS10135 a4672e3f3cdafca5b56d85c1dcd16a0e 155 PANTHER PTHR21340:SF1 118 149 2.6E-36 T 22-04-2016 NHAM_RS10135 a4672e3f3cdafca5b56d85c1dcd16a0e 155 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NHAM_RS10135 a4672e3f3cdafca5b56d85c1dcd16a0e 155 SUPERFAMILY SSF55811 4 147 6.91E-20 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS10135 a4672e3f3cdafca5b56d85c1dcd16a0e 155 Gene3D G3DSA:3.90.79.10 4 139 2.0E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS10135 a4672e3f3cdafca5b56d85c1dcd16a0e 155 PANTHER PTHR21340 1 101 2.6E-36 T 22-04-2016 NHAM_RS10135 a4672e3f3cdafca5b56d85c1dcd16a0e 155 PANTHER PTHR21340 118 149 2.6E-36 T 22-04-2016 NHAM_RS10135 a4672e3f3cdafca5b56d85c1dcd16a0e 155 Pfam PF00293 NUDIX domain 4 135 4.1E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NHAM_RS19955 c10d26635482d7dc07f100aef24bd241 177 Pfam PF01292 Prokaryotic cytochrome b561 8 172 4.4E-20 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NHAM_RS19955 c10d26635482d7dc07f100aef24bd241 177 PANTHER PTHR30529 1 177 1.9E-32 T 22-04-2016 NHAM_RS19955 c10d26635482d7dc07f100aef24bd241 177 SUPERFAMILY SSF81342 6 173 1.65E-21 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 Gene3D G3DSA:2.30.42.10 448 518 4.5E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 Gene3D G3DSA:2.40.10.10 207 316 1.6E-42 T 22-04-2016 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 75 517 1.7E-135 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 SUPERFAMILY SSF50156 446 519 5.65E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 PANTHER PTHR22939:SF79 124 421 5.1E-108 T 22-04-2016 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 PANTHER PTHR22939:SF79 75 95 5.1E-108 T 22-04-2016 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 PANTHER PTHR22939 124 421 5.1E-108 T 22-04-2016 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 PANTHER PTHR22939 75 95 5.1E-108 T 22-04-2016 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 Pfam PF13180 PDZ domain 432 500 5.1E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 Pfam PF13180 PDZ domain 314 405 4.2E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 SUPERFAMILY SSF50156 272 396 5.78E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 PRINTS PR00834 HtrA/DegQ protease family signature 151 163 1.8E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 PRINTS PR00834 HtrA/DegQ protease family signature 172 192 1.8E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 PRINTS PR00834 HtrA/DegQ protease family signature 212 236 1.8E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 PRINTS PR00834 HtrA/DegQ protease family signature 354 366 1.8E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 1.8E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 PRINTS PR00834 HtrA/DegQ protease family signature 268 285 1.8E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 Gene3D G3DSA:2.40.10.10 74 204 1.6E-33 T 22-04-2016 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 SMART SM00228 314 396 1.9E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 SMART SM00228 432 511 1.7E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 SUPERFAMILY SSF50494 72 306 1.54E-62 T 22-04-2016 IPR009003 Peptidase S1, PA clan NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 Pfam PF13365 Trypsin-like peptidase domain 142 275 2.3E-32 T 22-04-2016 NHAM_RS07360 db7d0e5d857fd967e68c971410bbd4b1 523 Gene3D G3DSA:2.30.42.10 317 410 7.2E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS15595 a537a9da1050c6f5e1d45cbca28f53dc 350 Gene3D G3DSA:3.30.360.10 141 341 1.2E-35 T 22-04-2016 NHAM_RS15595 a537a9da1050c6f5e1d45cbca28f53dc 350 PANTHER PTHR22604 3 349 1.1E-123 T 22-04-2016 NHAM_RS15595 a537a9da1050c6f5e1d45cbca28f53dc 350 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 125 9.8E-25 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NHAM_RS15595 a537a9da1050c6f5e1d45cbca28f53dc 350 Gene3D G3DSA:3.40.50.720 6 140 4.5E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15595 a537a9da1050c6f5e1d45cbca28f53dc 350 SUPERFAMILY SSF51735 5 153 2.7E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15595 a537a9da1050c6f5e1d45cbca28f53dc 350 PANTHER PTHR22604:SF94 3 349 1.1E-123 T 22-04-2016 NHAM_RS15595 a537a9da1050c6f5e1d45cbca28f53dc 350 SUPERFAMILY SSF55347 131 310 4.41E-22 T 22-04-2016 NHAM_RS16070 f3aa9cf7d69d20578b468d90acdb4d71 224 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 24 213 7.7E-64 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 NHAM_RS16070 f3aa9cf7d69d20578b468d90acdb4d71 224 SUPERFAMILY SSF53448 21 211 3.15E-28 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS16070 f3aa9cf7d69d20578b468d90acdb4d71 224 Gene3D G3DSA:3.90.550.10 22 218 1.8E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS16070 f3aa9cf7d69d20578b468d90acdb4d71 224 PANTHER PTHR19136:SF81 21 218 2.4E-46 T 22-04-2016 NHAM_RS16070 f3aa9cf7d69d20578b468d90acdb4d71 224 PANTHER PTHR19136 21 218 2.4E-46 T 22-04-2016 NHAM_RS16070 f3aa9cf7d69d20578b468d90acdb4d71 224 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 21 215 26.7 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 NHAM_RS16070 f3aa9cf7d69d20578b468d90acdb4d71 224 Pfam PF12804 MobA-like NTP transferase domain 25 182 1.4E-33 T 22-04-2016 IPR025877 MobA-like NTP transferase NHAM_RS01295 716c0c97e542766be27e5e3adc04ac5e 312 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 22 301 3.2E-93 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 NHAM_RS01295 716c0c97e542766be27e5e3adc04ac5e 312 Pfam PF01040 UbiA prenyltransferase family 36 283 1.3E-56 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 NHAM_RS01295 716c0c97e542766be27e5e3adc04ac5e 312 PANTHER PTHR11048:SF3 6 301 2.8E-72 T 22-04-2016 NHAM_RS01295 716c0c97e542766be27e5e3adc04ac5e 312 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site NHAM_RS01295 716c0c97e542766be27e5e3adc04ac5e 312 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 19 303 19.834 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 NHAM_RS01295 716c0c97e542766be27e5e3adc04ac5e 312 PANTHER PTHR11048 6 301 2.8E-72 T 22-04-2016 NHAM_RS17755 716c0c97e542766be27e5e3adc04ac5e 312 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 22 301 3.2E-93 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 NHAM_RS17755 716c0c97e542766be27e5e3adc04ac5e 312 Pfam PF01040 UbiA prenyltransferase family 36 283 1.3E-56 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 NHAM_RS17755 716c0c97e542766be27e5e3adc04ac5e 312 PANTHER PTHR11048:SF3 6 301 2.8E-72 T 22-04-2016 NHAM_RS17755 716c0c97e542766be27e5e3adc04ac5e 312 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site NHAM_RS17755 716c0c97e542766be27e5e3adc04ac5e 312 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 19 303 19.834 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 NHAM_RS17755 716c0c97e542766be27e5e3adc04ac5e 312 PANTHER PTHR11048 6 301 2.8E-72 T 22-04-2016 NHAM_RS11055 f8fe5d020910e2512f8397aa9c311336 446 SMART SM00028 56 89 120.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS11055 f8fe5d020910e2512f8397aa9c311336 446 SMART SM00028 90 123 0.012 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS11055 f8fe5d020910e2512f8397aa9c311336 446 Gene3D G3DSA:1.25.40.10 51 120 1.4E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS11055 f8fe5d020910e2512f8397aa9c311336 446 Pfam PF13432 Tetratricopeptide repeat 63 120 2.4E-7 T 22-04-2016 NHAM_RS11055 f8fe5d020910e2512f8397aa9c311336 446 SUPERFAMILY SSF48452 45 143 5.06E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS03940 3fe44d7b013831eca2b397c3102b4e20 225 PANTHER PTHR30582:SF1 56 203 8.0E-52 T 22-04-2016 NHAM_RS03940 3fe44d7b013831eca2b397c3102b4e20 225 PANTHER PTHR30582 56 203 8.0E-52 T 22-04-2016 NHAM_RS03940 3fe44d7b013831eca2b397c3102b4e20 225 SUPERFAMILY SSF141523 65 202 1.96E-30 T 22-04-2016 NHAM_RS03940 3fe44d7b013831eca2b397c3102b4e20 225 Pfam PF03734 L,D-transpeptidase catalytic domain 71 201 3.6E-18 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NHAM_RS03940 3fe44d7b013831eca2b397c3102b4e20 225 Gene3D G3DSA:2.40.440.10 65 202 3.3E-32 T 22-04-2016 NHAM_RS03330 c1887309060c7b0d55a3824b12f4acc9 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 215 252 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS03330 c1887309060c7b0d55a3824b12f4acc9 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 9 389 9.8E-132 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 NHAM_RS03330 c1887309060c7b0d55a3824b12f4acc9 403 PANTHER PTHR11986 13 397 1.4E-167 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS03330 c1887309060c7b0d55a3824b12f4acc9 403 Gene3D G3DSA:3.90.1150.10 282 392 3.6E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS03330 c1887309060c7b0d55a3824b12f4acc9 403 PANTHER PTHR11986:SF79 13 397 1.4E-167 T 22-04-2016 NHAM_RS03330 c1887309060c7b0d55a3824b12f4acc9 403 Gene3D G3DSA:3.40.640.10 52 281 4.5E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS03330 c1887309060c7b0d55a3824b12f4acc9 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 6 390 44.511 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 NHAM_RS03330 c1887309060c7b0d55a3824b12f4acc9 403 SUPERFAMILY SSF53383 8 390 1.95E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS03330 c1887309060c7b0d55a3824b12f4acc9 403 Pfam PF00202 Aminotransferase class-III 18 388 3.3E-110 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NHAM_RS00570 0d17eed66fc607cc1c40f7bd246ad4ff 199 Pfam PF01121 Dephospho-CoA kinase 2 176 2.2E-39 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 NHAM_RS00570 0d17eed66fc607cc1c40f7bd246ad4ff 199 Gene3D G3DSA:3.40.50.300 1 191 4.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00570 0d17eed66fc607cc1c40f7bd246ad4ff 199 PANTHER PTHR10695 1 190 4.7E-55 T 22-04-2016 NHAM_RS00570 0d17eed66fc607cc1c40f7bd246ad4ff 199 SUPERFAMILY SSF52540 1 189 2.06E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00570 0d17eed66fc607cc1c40f7bd246ad4ff 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 194 25.484 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 NHAM_RS00570 0d17eed66fc607cc1c40f7bd246ad4ff 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 184 5.0E-36 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 NHAM_RS00620 359e31509a39ae6d855003919057e15b 216 SUPERFAMILY SSF52317 3 205 4.45E-49 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS00620 359e31509a39ae6d855003919057e15b 216 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 214 33.464 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 NHAM_RS00620 359e31509a39ae6d855003919057e15b 216 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 213 8.4E-62 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 NHAM_RS00620 359e31509a39ae6d855003919057e15b 216 PIRSF PIRSF000495 1 216 6.2E-65 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 NHAM_RS00620 359e31509a39ae6d855003919057e15b 216 PANTHER PTHR21235 5 216 1.2E-77 T 22-04-2016 NHAM_RS00620 359e31509a39ae6d855003919057e15b 216 Pfam PF00117 Glutamine amidotransferase class-I 46 211 5.9E-18 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 NHAM_RS00620 359e31509a39ae6d855003919057e15b 216 Gene3D G3DSA:3.40.50.880 3 214 2.4E-65 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS00620 359e31509a39ae6d855003919057e15b 216 PANTHER PTHR21235:SF1 5 216 1.2E-77 T 22-04-2016 NHAM_RS09415 a14e9e1c8af88f5c590e065b8ea9d9f5 285 SUPERFAMILY SSF56752 1 279 8.76E-76 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NHAM_RS09415 a14e9e1c8af88f5c590e065b8ea9d9f5 285 Gene3D G3DSA:3.20.10.10 127 280 5.2E-48 T 22-04-2016 NHAM_RS09415 a14e9e1c8af88f5c590e065b8ea9d9f5 285 PANTHER PTHR11825:SF38 4 278 8.0E-99 T 22-04-2016 NHAM_RS09415 a14e9e1c8af88f5c590e065b8ea9d9f5 285 Pfam PF01063 Amino-transferase class IV 31 257 2.7E-45 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NHAM_RS09415 a14e9e1c8af88f5c590e065b8ea9d9f5 285 Gene3D G3DSA:3.30.470.10 4 118 5.1E-30 T 22-04-2016 NHAM_RS09415 a14e9e1c8af88f5c590e065b8ea9d9f5 285 PANTHER PTHR11825 4 278 8.0E-99 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 NHAM_RS11440 b6d724b1a432a52adc26eb89c86ab030 232 SUPERFAMILY SSF81338 5 219 6.41E-42 T 22-04-2016 IPR023271 Aquaporin-like NHAM_RS11440 b6d724b1a432a52adc26eb89c86ab030 232 PRINTS PR00783 Major intrinsic protein family signature 129 147 6.9E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS11440 b6d724b1a432a52adc26eb89c86ab030 232 PRINTS PR00783 Major intrinsic protein family signature 86 105 6.9E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS11440 b6d724b1a432a52adc26eb89c86ab030 232 PRINTS PR00783 Major intrinsic protein family signature 8 27 6.9E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS11440 b6d724b1a432a52adc26eb89c86ab030 232 PRINTS PR00783 Major intrinsic protein family signature 49 73 6.9E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS11440 b6d724b1a432a52adc26eb89c86ab030 232 Pfam PF00230 Major intrinsic protein 5 148 3.0E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS11440 b6d724b1a432a52adc26eb89c86ab030 232 PANTHER PTHR19139 8 160 5.5E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS11440 b6d724b1a432a52adc26eb89c86ab030 232 Gene3D G3DSA:1.20.1080.10 6 218 2.5E-34 T 22-04-2016 IPR023271 Aquaporin-like NHAM_RS06655 a073b91910c4d3fcbd31801e55869faa 329 SUPERFAMILY SSF51735 7 141 8.86E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06655 a073b91910c4d3fcbd31801e55869faa 329 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 166 220 1.9E-4 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 NHAM_RS06655 a073b91910c4d3fcbd31801e55869faa 329 Gene3D G3DSA:3.30.360.10 140 311 1.3E-30 T 22-04-2016 NHAM_RS06655 a073b91910c4d3fcbd31801e55869faa 329 Gene3D G3DSA:3.40.50.720 6 139 3.6E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06655 a073b91910c4d3fcbd31801e55869faa 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 127 4.1E-27 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 NHAM_RS06655 a073b91910c4d3fcbd31801e55869faa 329 PANTHER PTHR22604 6 312 1.6E-85 T 22-04-2016 NHAM_RS06655 a073b91910c4d3fcbd31801e55869faa 329 SUPERFAMILY SSF55347 132 289 7.85E-17 T 22-04-2016 NHAM_RS06655 a073b91910c4d3fcbd31801e55869faa 329 PANTHER PTHR22604:SF14 6 312 1.6E-85 T 22-04-2016 NHAM_RS03305 8b9f4dfd7d6f4d788400ad283e4d2bdc 281 PANTHER PTHR30425:SF0 1 281 2.3E-111 T 22-04-2016 NHAM_RS03305 8b9f4dfd7d6f4d788400ad283e4d2bdc 281 SUPERFAMILY SSF161098 30 269 4.49E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS03305 8b9f4dfd7d6f4d788400ad283e4d2bdc 281 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 15 276 7.5E-76 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 NHAM_RS03305 8b9f4dfd7d6f4d788400ad283e4d2bdc 281 Gene3D G3DSA:1.10.3720.10 60 274 5.2E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS03305 8b9f4dfd7d6f4d788400ad283e4d2bdc 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 274 1.5E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS03305 8b9f4dfd7d6f4d788400ad283e4d2bdc 281 PANTHER PTHR30425 1 281 2.3E-111 T 22-04-2016 NHAM_RS07640 0cd5d6d1fdd3b2c769100feef672b8d8 292 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 56 78 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NHAM_RS07640 0cd5d6d1fdd3b2c769100feef672b8d8 292 PANTHER PTHR15362 4 147 1.6E-32 T 22-04-2016 NHAM_RS07640 0cd5d6d1fdd3b2c769100feef672b8d8 292 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 20 183 2.5E-33 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 NHAM_RS07640 0cd5d6d1fdd3b2c769100feef672b8d8 292 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 198 234 1.8E-12 T 22-04-2016 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal NHAM_RS07640 0cd5d6d1fdd3b2c769100feef672b8d8 292 PANTHER PTHR15362:SF2 4 147 1.6E-32 T 22-04-2016 NHAM_RS07640 0cd5d6d1fdd3b2c769100feef672b8d8 292 Pfam PF01066 CDP-alcohol phosphatidyltransferase 15 78 2.5E-14 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NHAM_RS11135 679c3a68fc2541ab77ad5e77b868d7ac 156 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 156 68.384 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NHAM_RS11135 679c3a68fc2541ab77ad5e77b868d7ac 156 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 143 1.5E-55 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NHAM_RS11135 679c3a68fc2541ab77ad5e77b868d7ac 156 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 143 5.0E-77 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NHAM_RS11135 679c3a68fc2541ab77ad5e77b868d7ac 156 Pfam PF01220 Dehydroquinase class II 5 141 1.2E-56 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NHAM_RS11135 679c3a68fc2541ab77ad5e77b868d7ac 156 PANTHER PTHR21272 1 151 1.2E-86 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NHAM_RS11135 679c3a68fc2541ab77ad5e77b868d7ac 156 Gene3D G3DSA:3.40.50.9100 4 145 1.1E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NHAM_RS11135 679c3a68fc2541ab77ad5e77b868d7ac 156 SUPERFAMILY SSF52304 4 146 1.1E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NHAM_RS11135 679c3a68fc2541ab77ad5e77b868d7ac 156 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NHAM_RS11135 679c3a68fc2541ab77ad5e77b868d7ac 156 PIRSF PIRSF001399 1 148 1.4E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 NHAM_RS13995 5fdc46863cfa4f19e6426b57f01042f8 177 SUPERFAMILY SSF101738 4 116 3.27E-44 T 22-04-2016 IPR007481 Stringent starvation protein B NHAM_RS13995 5fdc46863cfa4f19e6426b57f01042f8 177 Gene3D G3DSA:2.30.30.220 1 117 1.6E-53 T 22-04-2016 IPR007481 Stringent starvation protein B NHAM_RS13995 5fdc46863cfa4f19e6426b57f01042f8 177 Pfam PF04386 Stringent starvation protein B 11 169 1.2E-53 T 22-04-2016 IPR007481 Stringent starvation protein B NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 PANTHER PTHR11638 4 141 0.0 T 22-04-2016 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 PANTHER PTHR11638 160 773 0.0 T 22-04-2016 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 PANTHER PTHR11638:SF111 4 141 0.0 T 22-04-2016 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 PANTHER PTHR11638:SF111 160 773 0.0 T 22-04-2016 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 SUPERFAMILY SSF52540 447 745 2.03E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 663 743 6.8E-22 T 22-04-2016 IPR019489 Clp ATPase, C-terminal NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 SMART SM00382 216 361 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 SMART SM00382 497 660 5.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 Gene3D G3DSA:1.10.1780.10 4 144 4.0E-39 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 Gene3D G3DSA:3.40.50.300 179 360 1.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 543 561 9.9E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 501 519 9.9E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 619 9.9E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 572 590 9.9E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 SUPERFAMILY SSF81923 4 144 1.44E-55 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 Gene3D G3DSA:3.40.50.300 451 674 2.5E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 Gene3D G3DSA:1.10.8.60 361 445 1.5E-28 T 22-04-2016 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 5 743 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 SUPERFAMILY SSF52540 177 435 9.73E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 312 324 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 SMART SM01086 663 752 2.4E-30 T 22-04-2016 IPR019489 Clp ATPase, C-terminal NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 Gene3D G3DSA:1.10.8.60 675 752 5.0E-28 T 22-04-2016 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 63 2.9E-11 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 Pfam PF07724 AAA domain (Cdc48 subfamily) 496 656 1.9E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 528 546 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 NHAM_RS12335 ca2efbbbb49ae1e7f67bf2cea1b257d2 799 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 221 332 6.2E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS01810 0a3a9cb3d38529b6f3d4909947de2ceb 217 SUPERFAMILY SSF52540 1 216 1.13E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01810 0a3a9cb3d38529b6f3d4909947de2ceb 217 PANTHER PTHR24220 3 216 1.0E-98 T 22-04-2016 NHAM_RS01810 0a3a9cb3d38529b6f3d4909947de2ceb 217 Gene3D G3DSA:3.40.50.300 1 216 3.8E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01810 0a3a9cb3d38529b6f3d4909947de2ceb 217 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS01810 0a3a9cb3d38529b6f3d4909947de2ceb 217 PANTHER PTHR24220:SF430 3 216 1.0E-98 T 22-04-2016 NHAM_RS01810 0a3a9cb3d38529b6f3d4909947de2ceb 217 SMART SM00382 30 215 3.3E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS01810 0a3a9cb3d38529b6f3d4909947de2ceb 217 Pfam PF00005 ABC transporter 25 166 3.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS17700 8bd4e0b7d34394c1a9b1deddc54d493e 326 SUPERFAMILY SSF46626 127 232 5.01E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS17700 8bd4e0b7d34394c1a9b1deddc54d493e 326 Pfam PF00034 Cytochrome c 36 125 8.0E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS17700 8bd4e0b7d34394c1a9b1deddc54d493e 326 Pfam PF00034 Cytochrome c 144 233 6.0E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS17700 8bd4e0b7d34394c1a9b1deddc54d493e 326 Gene3D G3DSA:1.10.760.10 14 125 4.4E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS17700 8bd4e0b7d34394c1a9b1deddc54d493e 326 Gene3D G3DSA:1.10.760.10 128 232 2.7E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS17700 8bd4e0b7d34394c1a9b1deddc54d493e 326 SUPERFAMILY SSF46626 14 125 2.7E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS06600 c6c7665afc6895be214962a849eefd77 336 PANTHER PTHR10366:SF39 2 322 1.8E-101 T 22-04-2016 NHAM_RS06600 c6c7665afc6895be214962a849eefd77 336 Gene3D G3DSA:3.90.25.10 170 219 1.4E-37 T 22-04-2016 NHAM_RS06600 c6c7665afc6895be214962a849eefd77 336 Gene3D G3DSA:3.90.25.10 254 324 1.4E-37 T 22-04-2016 NHAM_RS06600 c6c7665afc6895be214962a849eefd77 336 SUPERFAMILY SSF51735 1 321 2.78E-92 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06600 c6c7665afc6895be214962a849eefd77 336 Gene3D G3DSA:3.40.50.720 1 169 2.6E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06600 c6c7665afc6895be214962a849eefd77 336 PANTHER PTHR10366 2 322 1.8E-101 T 22-04-2016 NHAM_RS06600 c6c7665afc6895be214962a849eefd77 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 325 4.5E-129 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 NHAM_RS06600 c6c7665afc6895be214962a849eefd77 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 2.9E-54 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NHAM_RS06600 c6c7665afc6895be214962a849eefd77 336 Gene3D G3DSA:3.90.25.10 220 243 3.0E-4 T 22-04-2016 NHAM_RS04600 3db72e69805aeee14e43cff3584cf04f 136 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 123 2.3E-24 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS04600 3db72e69805aeee14e43cff3584cf04f 136 PANTHER PTHR13822 1 119 3.7E-29 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS04600 3db72e69805aeee14e43cff3584cf04f 136 SUPERFAMILY SSF51344 4 82 2.22E-20 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS04600 3db72e69805aeee14e43cff3584cf04f 136 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 2.9E-23 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS04600 3db72e69805aeee14e43cff3584cf04f 136 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 122 17.658 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS04600 3db72e69805aeee14e43cff3584cf04f 136 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 86 5.0E-37 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS04600 3db72e69805aeee14e43cff3584cf04f 136 Gene3D G3DSA:2.60.15.10 3 89 2.9E-25 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 NHAM_RS10215 b264e3741867bb690e27218040f8cb94 267 SUPERFAMILY SSF56281 5 264 4.78E-44 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS10215 b264e3741867bb690e27218040f8cb94 267 PANTHER PTHR12553:SF7 5 265 8.4E-64 T 22-04-2016 NHAM_RS10215 b264e3741867bb690e27218040f8cb94 267 Pfam PF12706 Beta-lactamase superfamily domain 51 234 1.2E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS10215 b264e3741867bb690e27218040f8cb94 267 PANTHER PTHR12553 5 265 8.4E-64 T 22-04-2016 NHAM_RS10215 b264e3741867bb690e27218040f8cb94 267 SMART SM00849 37 213 0.0062 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS10215 b264e3741867bb690e27218040f8cb94 267 Gene3D G3DSA:3.60.15.10 3 264 2.0E-68 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS05820 5a5746f1472205f0f88b32bdc04c44bf 314 SUPERFAMILY SSF53474 9 308 6.74E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS05820 5a5746f1472205f0f88b32bdc04c44bf 314 PANTHER PTHR11614:SF100 18 307 6.8E-106 T 22-04-2016 NHAM_RS05820 5a5746f1472205f0f88b32bdc04c44bf 314 PANTHER PTHR11614 18 307 6.8E-106 T 22-04-2016 NHAM_RS05820 5a5746f1472205f0f88b32bdc04c44bf 314 Gene3D G3DSA:3.40.50.1820 19 155 1.7E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS05820 5a5746f1472205f0f88b32bdc04c44bf 314 Gene3D G3DSA:3.40.50.1820 204 307 1.7E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS05820 5a5746f1472205f0f88b32bdc04c44bf 314 Pfam PF12146 Serine aminopeptidase, S33 39 294 1.9E-41 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 NHAM_RS14385 d5e1c490a7ab1835d24d428fc03d4012 232 SUPERFAMILY SSF52540 3 230 2.36E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14385 d5e1c490a7ab1835d24d428fc03d4012 232 SMART SM00382 28 208 1.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS14385 d5e1c490a7ab1835d24d428fc03d4012 232 PANTHER PTHR24220:SF568 5 232 1.9E-99 T 22-04-2016 NHAM_RS14385 d5e1c490a7ab1835d24d428fc03d4012 232 Gene3D G3DSA:3.40.50.300 3 226 1.1E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14385 d5e1c490a7ab1835d24d428fc03d4012 232 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS14385 d5e1c490a7ab1835d24d428fc03d4012 232 Pfam PF00005 ABC transporter 21 160 6.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS14385 d5e1c490a7ab1835d24d428fc03d4012 232 PANTHER PTHR24220 5 232 1.9E-99 T 22-04-2016 NHAM_RS18245 2bea25f71d7e27e0fce4111f4c83c8a9 168 Gene3D G3DSA:3.40.33.10 51 155 6.8E-8 T 22-04-2016 IPR014044 CAP domain NHAM_RS18245 2bea25f71d7e27e0fce4111f4c83c8a9 168 PANTHER PTHR31157 48 166 3.2E-30 T 22-04-2016 NHAM_RS18245 2bea25f71d7e27e0fce4111f4c83c8a9 168 Pfam PF00188 Cysteine-rich secretory protein family 48 160 6.1E-17 T 22-04-2016 IPR014044 CAP domain NHAM_RS18245 2bea25f71d7e27e0fce4111f4c83c8a9 168 SUPERFAMILY SSF55797 47 159 1.07E-17 T 22-04-2016 IPR014044 CAP domain NHAM_RS02400 e21091c5df3d44b0a75d2471c7ea279f 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 4 103 2.0E-26 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family NHAM_RS02400 e21091c5df3d44b0a75d2471c7ea279f 106 PIRSF PIRSF004555 1 105 1.3E-34 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family NHAM_RS02400 e21091c5df3d44b0a75d2471c7ea279f 106 Gene3D G3DSA:3.30.1310.10 2 105 9.5E-40 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family NHAM_RS02400 e21091c5df3d44b0a75d2471c7ea279f 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 20.918 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family NHAM_RS02400 e21091c5df3d44b0a75d2471c7ea279f 106 PANTHER PTHR33449 1 105 2.7E-39 T 22-04-2016 NHAM_RS02400 e21091c5df3d44b0a75d2471c7ea279f 106 PANTHER PTHR33449:SF1 1 105 2.7E-39 T 22-04-2016 NHAM_RS02400 e21091c5df3d44b0a75d2471c7ea279f 106 Pfam PF02575 YbaB/EbfC DNA-binding family 8 97 5.5E-32 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family NHAM_RS02400 e21091c5df3d44b0a75d2471c7ea279f 106 SUPERFAMILY SSF82607 8 101 5.75E-31 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family NHAM_RS03600 d237024302f731827f86b556b3990118 525 Pfam PF02120 Flagellar hook-length control protein FliK 395 479 7.2E-20 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal NHAM_RS16695 5354132ecee79d616b80c345ea28fcf0 177 PANTHER PTHR23091 1 156 4.5E-23 T 22-04-2016 NHAM_RS16695 5354132ecee79d616b80c345ea28fcf0 177 Gene3D G3DSA:3.40.630.30 6 132 6.0E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS16695 5354132ecee79d616b80c345ea28fcf0 177 Pfam PF13527 Acetyltransferase (GNAT) domain 12 127 7.1E-8 T 22-04-2016 NHAM_RS16695 5354132ecee79d616b80c345ea28fcf0 177 PANTHER PTHR23091:SF237 1 156 4.5E-23 T 22-04-2016 NHAM_RS16695 5354132ecee79d616b80c345ea28fcf0 177 SUPERFAMILY SSF55729 6 130 6.92E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 PANTHER PTHR32089 278 557 3.6E-161 T 22-04-2016 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 PANTHER PTHR32089 183 246 3.6E-161 T 22-04-2016 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 SMART SM00304 211 264 0.0011 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 SMART SM00283 300 554 6.0E-46 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 Gene3D G3DSA:1.10.287.950 319 522 1.7E-46 T 22-04-2016 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 SUPERFAMILY SSF47170 67 151 5.49E-5 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 SUPERFAMILY SSF158472 212 260 6.54E-6 T 22-04-2016 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 SUPERFAMILY SSF58104 276 553 1.03E-62 T 22-04-2016 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 375 553 1.2E-33 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 PANTHER PTHR32089:SF40 278 557 3.6E-161 T 22-04-2016 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 PANTHER PTHR32089:SF40 183 246 3.6E-161 T 22-04-2016 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 7.0E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 320 349 7.0E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 425 7.0E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 12 37 7.0E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 184 3.8E-29 T 22-04-2016 IPR024478 4HB MCP domain NHAM_RS03995 75734ac28be54365796672e8fa701bc5 560 Pfam PF00672 HAMP domain 192 259 3.4E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS18060 75aacbc1558dc96f973a137a7cf17b7a 157 PANTHER PTHR33990:SF2 1 157 1.4E-80 T 22-04-2016 NHAM_RS18060 75aacbc1558dc96f973a137a7cf17b7a 157 SUPERFAMILY SSF54593 3 155 2.82E-51 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS18060 75aacbc1558dc96f973a137a7cf17b7a 157 Gene3D G3DSA:3.10.180.10 1 129 3.1E-49 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS18060 75aacbc1558dc96f973a137a7cf17b7a 157 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 117 4.6E-50 T 22-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase NHAM_RS18060 75aacbc1558dc96f973a137a7cf17b7a 157 PANTHER PTHR33990 1 157 1.4E-80 T 22-04-2016 NHAM_RS18060 75aacbc1558dc96f973a137a7cf17b7a 157 PIRSF PIRSF021700 1 157 1.3E-66 T 22-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase NHAM_RS07475 55420eea1838f259851f378725dcf793 691 Pfam PF00128 Alpha amylase, catalytic domain 194 278 2.9E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NHAM_RS07475 55420eea1838f259851f378725dcf793 691 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 6 687 0.0 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 NHAM_RS07475 55420eea1838f259851f378725dcf793 691 SUPERFAMILY SSF81296 6 148 3.36E-46 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS07475 55420eea1838f259851f378725dcf793 691 Gene3D G3DSA:2.60.40.1180 593 687 9.5E-21 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta NHAM_RS07475 55420eea1838f259851f378725dcf793 691 SMART SM00642 138 571 6.2E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NHAM_RS07475 55420eea1838f259851f378725dcf793 691 Gene3D G3DSA:2.60.40.10 6 157 1.5E-55 T 22-04-2016 IPR013783 Immunoglobulin-like fold NHAM_RS07475 55420eea1838f259851f378725dcf793 691 SUPERFAMILY SSF51011 590 688 2.64E-21 T 22-04-2016 NHAM_RS07475 55420eea1838f259851f378725dcf793 691 PANTHER PTHR10357 1 582 9.5E-298 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07475 55420eea1838f259851f378725dcf793 691 PANTHER PTHR10357 600 665 9.5E-298 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07475 55420eea1838f259851f378725dcf793 691 Gene3D G3DSA:3.20.20.80 158 575 3.7E-106 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07475 55420eea1838f259851f378725dcf793 691 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 98 2.4E-18 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 NHAM_RS07475 55420eea1838f259851f378725dcf793 691 SUPERFAMILY SSF51445 140 473 8.7E-118 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07475 55420eea1838f259851f378725dcf793 691 SUPERFAMILY SSF51445 502 577 8.7E-118 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07475 55420eea1838f259851f378725dcf793 691 PANTHER PTHR10357:SF74 1 582 9.5E-298 T 22-04-2016 NHAM_RS07475 55420eea1838f259851f378725dcf793 691 PANTHER PTHR10357:SF74 600 665 9.5E-298 T 22-04-2016 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 SUPERFAMILY SSF46689 352 473 8.51E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 454 1.9E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 454 474 1.9E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 SMART SM00382 160 307 1.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 SMART SM00448 4 115 1.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 Gene3D G3DSA:3.40.50.2300 4 124 1.0E-31 T 22-04-2016 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 Pfam PF02954 Bacterial regulatory protein, Fis family 431 469 2.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 PANTHER PTHR32071 3 478 7.5E-204 T 22-04-2016 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 Gene3D G3DSA:1.10.8.60 313 385 2.2E-18 T 22-04-2016 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 SUPERFAMILY SSF52540 140 376 5.64E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 Gene3D G3DSA:3.40.50.300 139 312 4.7E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 Gene3D G3DSA:1.10.10.60 417 473 1.4E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 PANTHER PTHR32071:SF15 3 478 7.5E-204 T 22-04-2016 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 471 5.4E-222 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 SUPERFAMILY SSF52172 2 184 2.42E-40 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 Pfam PF00072 Response regulator receiver domain 6 115 2.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 Pfam PF00158 Sigma-54 interaction domain 140 306 3.1E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NHAM_RS09400 83b732ac3b3e0d8c30b7fa6d8c7aebff 480 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NHAM_RS02850 e6775f82390d28f1a8991afa7dca3cc9 240 SMART SM00382 48 233 4.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS02850 e6775f82390d28f1a8991afa7dca3cc9 240 Pfam PF00005 ABC transporter 39 185 3.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS02850 e6775f82390d28f1a8991afa7dca3cc9 240 PANTHER PTHR24220 21 235 2.5E-101 T 22-04-2016 NHAM_RS02850 e6775f82390d28f1a8991afa7dca3cc9 240 Gene3D G3DSA:3.40.50.300 20 235 1.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02850 e6775f82390d28f1a8991afa7dca3cc9 240 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS02850 e6775f82390d28f1a8991afa7dca3cc9 240 PANTHER PTHR24220:SF509 21 235 2.5E-101 T 22-04-2016 NHAM_RS02850 e6775f82390d28f1a8991afa7dca3cc9 240 SUPERFAMILY SSF52540 20 235 3.99E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13970 2c6e23504e5f019fc55fe0b6e2323cd7 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 9 64 1.1E-16 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 NHAM_RS13970 2c6e23504e5f019fc55fe0b6e2323cd7 66 PANTHER PTHR38602 1 66 4.4E-14 T 22-04-2016 NHAM_RS13970 2c6e23504e5f019fc55fe0b6e2323cd7 66 PANTHER PTHR38602:SF1 1 66 4.4E-14 T 22-04-2016 NHAM_RS01645 621f83d598f86999923f02e8aaade267 499 PANTHER PTHR35004 2 443 9.8E-187 T 22-04-2016 NHAM_RS01645 621f83d598f86999923f02e8aaade267 499 Pfam PF00665 Integrase core domain 127 253 4.4E-17 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS01645 621f83d598f86999923f02e8aaade267 499 PANTHER PTHR35004:SF2 2 443 9.8E-187 T 22-04-2016 NHAM_RS01645 621f83d598f86999923f02e8aaade267 499 Gene3D G3DSA:1.10.10.10 16 41 7.5E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS01645 621f83d598f86999923f02e8aaade267 499 SUPERFAMILY SSF53098 127 285 4.8E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS01645 621f83d598f86999923f02e8aaade267 499 Gene3D G3DSA:3.30.420.10 157 290 3.1E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS04090 621f83d598f86999923f02e8aaade267 499 PANTHER PTHR35004 2 443 9.8E-187 T 22-04-2016 NHAM_RS04090 621f83d598f86999923f02e8aaade267 499 Pfam PF00665 Integrase core domain 127 253 4.4E-17 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS04090 621f83d598f86999923f02e8aaade267 499 PANTHER PTHR35004:SF2 2 443 9.8E-187 T 22-04-2016 NHAM_RS04090 621f83d598f86999923f02e8aaade267 499 Gene3D G3DSA:1.10.10.10 16 41 7.5E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04090 621f83d598f86999923f02e8aaade267 499 SUPERFAMILY SSF53098 127 285 4.8E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS04090 621f83d598f86999923f02e8aaade267 499 Gene3D G3DSA:3.30.420.10 157 290 3.1E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS20065 621f83d598f86999923f02e8aaade267 499 PANTHER PTHR35004 2 443 9.8E-187 T 22-04-2016 NHAM_RS20065 621f83d598f86999923f02e8aaade267 499 Pfam PF00665 Integrase core domain 127 253 4.4E-17 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS20065 621f83d598f86999923f02e8aaade267 499 PANTHER PTHR35004:SF2 2 443 9.8E-187 T 22-04-2016 NHAM_RS20065 621f83d598f86999923f02e8aaade267 499 Gene3D G3DSA:1.10.10.10 16 41 7.5E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS20065 621f83d598f86999923f02e8aaade267 499 SUPERFAMILY SSF53098 127 285 4.8E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS20065 621f83d598f86999923f02e8aaade267 499 Gene3D G3DSA:3.30.420.10 157 290 3.1E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS13835 cddf978d5eebfad723cc8c57c273ebf1 403 PANTHER PTHR30469:SF5 27 399 8.7E-188 T 22-04-2016 NHAM_RS13835 cddf978d5eebfad723cc8c57c273ebf1 403 PANTHER PTHR30469 27 399 8.7E-188 T 22-04-2016 NHAM_RS13835 cddf978d5eebfad723cc8c57c273ebf1 403 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 99 299 1.5E-32 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS13835 cddf978d5eebfad723cc8c57c273ebf1 403 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 75 388 5.6E-72 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS13835 cddf978d5eebfad723cc8c57c273ebf1 403 SUPERFAMILY SSF111369 90 303 5.62E-49 T 22-04-2016 NHAM_RS13835 cddf978d5eebfad723cc8c57c273ebf1 403 Gene3D G3DSA:2.40.50.100 99 132 1.2E-13 T 22-04-2016 NHAM_RS13835 cddf978d5eebfad723cc8c57c273ebf1 403 Gene3D G3DSA:2.40.50.100 193 226 1.2E-13 T 22-04-2016 NHAM_RS08940 9d00078ca3ddce316589f169f1c6719f 340 SUPERFAMILY SSF52518 18 339 6.66E-105 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS08940 9d00078ca3ddce316589f169f1c6719f 340 Gene3D G3DSA:3.40.50.970 12 339 1.9E-136 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold NHAM_RS08940 9d00078ca3ddce316589f169f1c6719f 340 Pfam PF00676 Dehydrogenase E1 component 35 331 6.9E-103 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 NHAM_RS08940 9d00078ca3ddce316589f169f1c6719f 340 PANTHER PTHR11516 25 339 2.7E-172 T 22-04-2016 NHAM_RS08940 9d00078ca3ddce316589f169f1c6719f 340 PANTHER PTHR11516:SF40 25 339 2.7E-172 T 22-04-2016 NHAM_RS08940 9d00078ca3ddce316589f169f1c6719f 340 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 27 339 1.2E-154 T 22-04-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 NHAM_RS05405 4e41a4474a4b1eb7cfe39b5fa56557f0 304 PANTHER PTHR10491 1 301 1.0E-76 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family NHAM_RS05405 4e41a4474a4b1eb7cfe39b5fa56557f0 304 Pfam PF04321 RmlD substrate binding domain 1 293 7.8E-93 T 22-04-2016 IPR029903 RmlD-like substrate binding domain NHAM_RS05405 4e41a4474a4b1eb7cfe39b5fa56557f0 304 SUPERFAMILY SSF51735 1 295 1.47E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05405 4e41a4474a4b1eb7cfe39b5fa56557f0 304 Gene3D G3DSA:3.40.50.720 1 232 4.9E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05405 4e41a4474a4b1eb7cfe39b5fa56557f0 304 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 292 3.1E-93 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family NHAM_RS05405 4e41a4474a4b1eb7cfe39b5fa56557f0 304 PANTHER PTHR10491:SF4 1 301 1.0E-76 T 22-04-2016 NHAM_RS20665 c1322a4da6e945e1db4c782ac552f240 251 SUPERFAMILY SSF52540 41 147 6.09E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS20665 c1322a4da6e945e1db4c782ac552f240 251 Gene3D G3DSA:3.40.50.300 38 156 3.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 Pfam PF00689 Cation transporting ATPase, C-terminus 124 286 2.1E-18 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 Gene3D G3DSA:1.20.1110.10 4 287 5.3E-61 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 PRINTS PR01836 Magnesium-transporting ATPase signature 200 221 1.9E-28 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 PRINTS PR01836 Magnesium-transporting ATPase signature 117 128 1.9E-28 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 PRINTS PR01836 Magnesium-transporting ATPase signature 249 270 1.9E-28 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 PRINTS PR01836 Magnesium-transporting ATPase signature 169 185 1.9E-28 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 PRINTS PR01836 Magnesium-transporting ATPase signature 149 162 1.9E-28 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 PRINTS PR01836 Magnesium-transporting ATPase signature 99 114 1.9E-28 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 SUPERFAMILY SSF56784 5 140 2.31E-23 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 PANTHER PTHR24093:SF128 1 294 4.4E-90 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 SUPERFAMILY SSF81665 90 289 9.42E-37 T 22-04-2016 NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 12 127 3.4E-26 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 NHAM_RS09835 e1f3743ff48e82ea39c133bcd6130a57 303 PANTHER PTHR24093 1 294 4.4E-90 T 22-04-2016 NHAM_RS03815 ac74930103998d352f6233bcc05fd522 245 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site NHAM_RS03815 ac74930103998d352f6233bcc05fd522 245 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 9.7E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site NHAM_RS09430 33386bde296863e9b0531aee8a9f1898 478 Pfam PF00171 Aldehyde dehydrogenase family 14 472 7.0E-157 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS09430 33386bde296863e9b0531aee8a9f1898 478 Gene3D G3DSA:3.40.605.10 5 261 4.9E-90 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS09430 33386bde296863e9b0531aee8a9f1898 478 Gene3D G3DSA:3.40.309.10 262 448 2.2E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NHAM_RS09430 33386bde296863e9b0531aee8a9f1898 478 PANTHER PTHR11699 4 471 7.0E-198 T 22-04-2016 NHAM_RS09430 33386bde296863e9b0531aee8a9f1898 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NHAM_RS09430 33386bde296863e9b0531aee8a9f1898 478 SUPERFAMILY SSF53720 4 474 6.81E-158 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PANTHER PTHR24322 145 175 9.2E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PANTHER PTHR24322 8 129 9.2E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 Pfam PF00106 short chain dehydrogenase 4 185 5.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PANTHER PTHR24322:SF57 145 175 9.2E-34 T 22-04-2016 NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PANTHER PTHR24322:SF57 8 129 9.2E-34 T 22-04-2016 NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 6.0E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 6.0E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 6.0E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 3.6E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 210 3.6E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 3.6E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.6E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 3.6E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 3.6E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 Gene3D G3DSA:3.40.50.720 1 224 8.9E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS10680 d7598b46b97dbb41f7316a8d9c528f27 226 SUPERFAMILY SSF51735 1 224 3.92E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS07285 ed85c80f6841b47d73bdfee27223b0f6 1284 SUPERFAMILY SSF51445 561 567 2.36E-9 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07285 ed85c80f6841b47d73bdfee27223b0f6 1284 SUPERFAMILY SSF51445 612 648 2.36E-9 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07285 ed85c80f6841b47d73bdfee27223b0f6 1284 SUPERFAMILY SSF51445 330 526 2.36E-9 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07285 ed85c80f6841b47d73bdfee27223b0f6 1284 Pfam PF13550 Putative phage tail protein 777 938 1.1E-45 T 22-04-2016 IPR032876 Tip attachment protein J NHAM_RS07285 ed85c80f6841b47d73bdfee27223b0f6 1284 Pfam PF13547 GTA TIM-barrel-like domain 418 719 2.3E-137 T 22-04-2016 IPR025195 GTA TIM-barrel-like domain NHAM_RS03260 42ff6775f279de4f50d2aed43da97f77 553 Gene3D G3DSA:3.30.70.270 131 297 1.4E-39 T 22-04-2016 NHAM_RS03260 42ff6775f279de4f50d2aed43da97f77 553 PANTHER PTHR33121:SF10 293 535 2.2E-52 T 22-04-2016 NHAM_RS03260 42ff6775f279de4f50d2aed43da97f77 553 Gene3D G3DSA:3.20.20.450 306 539 1.8E-63 T 22-04-2016 IPR001633 EAL domain NHAM_RS03260 42ff6775f279de4f50d2aed43da97f77 553 Pfam PF00990 Diguanylate cyclase, GGDEF domain 131 282 4.0E-31 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS03260 42ff6775f279de4f50d2aed43da97f77 553 SMART SM00052 301 542 1.3E-54 T 22-04-2016 IPR001633 EAL domain NHAM_RS03260 42ff6775f279de4f50d2aed43da97f77 553 SMART SM00267 117 289 9.2E-43 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS03260 42ff6775f279de4f50d2aed43da97f77 553 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 127 283 2.7E-30 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS03260 42ff6775f279de4f50d2aed43da97f77 553 SUPERFAMILY SSF55073 133 290 2.67E-34 T 22-04-2016 IPR029787 Nucleotide cyclase NHAM_RS03260 42ff6775f279de4f50d2aed43da97f77 553 SUPERFAMILY SSF141868 307 539 1.83E-65 T 22-04-2016 IPR001633 EAL domain NHAM_RS03260 42ff6775f279de4f50d2aed43da97f77 553 PANTHER PTHR33121 293 535 2.2E-52 T 22-04-2016 NHAM_RS03260 42ff6775f279de4f50d2aed43da97f77 553 Pfam PF00563 EAL domain 308 535 2.1E-64 T 22-04-2016 IPR001633 EAL domain NHAM_RS07515 7219b813b50edf5f1e22e33747df736c 129 PANTHER PTHR10374 5 120 6.8E-22 T 22-04-2016 NHAM_RS07515 7219b813b50edf5f1e22e33747df736c 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 120 4.4E-11 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NHAM_RS07515 7219b813b50edf5f1e22e33747df736c 129 SUPERFAMILY SSF54593 2 124 1.93E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS07515 7219b813b50edf5f1e22e33747df736c 129 Gene3D G3DSA:3.10.180.10 6 122 6.2E-21 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 Gene3D G3DSA:1.10.10.10 2 67 9.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 Gene3D G3DSA:2.10.109.10 111 233 2.1E-39 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 Pfam PF01726 LexA DNA binding domain 2 63 3.5E-16 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 SUPERFAMILY SSF51306 109 231 1.92E-32 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 PANTHER PTHR33516 103 233 1.4E-79 T 22-04-2016 NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 PANTHER PTHR33516 1 74 1.4E-79 T 22-04-2016 NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 TIGRFAM TIGR00498 lexA: repressor LexA 2 232 2.0E-55 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 Pfam PF00717 Peptidase S24-like 149 213 6.0E-14 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 157 168 5.0E-10 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 146 156 5.0E-10 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 186 198 5.0E-10 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 PANTHER PTHR33516:SF2 103 233 1.4E-79 T 22-04-2016 NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 PANTHER PTHR33516:SF2 1 74 1.4E-79 T 22-04-2016 NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 Hamap MF_00015 LexA repressor [lexA]. 1 233 34.347 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 NHAM_RS08840 f4a4779d2446de70b2621a139125d83e 233 SUPERFAMILY SSF46785 2 68 8.13E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS10065 48293d106ea2e8ef20f8f4412511f3b6 489 Pfam PF08808 RES domain 208 386 1.5E-28 T 22-04-2016 IPR014914 RES domain NHAM_RS10065 48293d106ea2e8ef20f8f4412511f3b6 489 SMART SM00953 227 384 6.8E-26 T 22-04-2016 IPR014914 RES domain NHAM_RS19040 af42b56eb4be610a8a7eccc8d0402076 361 PANTHER PTHR22939:SF79 34 229 1.7E-18 T 22-04-2016 NHAM_RS19040 af42b56eb4be610a8a7eccc8d0402076 361 Pfam PF13365 Trypsin-like peptidase domain 71 207 6.5E-23 T 22-04-2016 NHAM_RS19040 af42b56eb4be610a8a7eccc8d0402076 361 Gene3D G3DSA:2.40.10.10 40 137 2.4E-11 T 22-04-2016 NHAM_RS19040 af42b56eb4be610a8a7eccc8d0402076 361 SUPERFAMILY SSF50494 50 230 2.71E-32 T 22-04-2016 IPR009003 Peptidase S1, PA clan NHAM_RS19040 af42b56eb4be610a8a7eccc8d0402076 361 Gene3D G3DSA:2.40.10.10 138 230 5.8E-18 T 22-04-2016 NHAM_RS19040 af42b56eb4be610a8a7eccc8d0402076 361 PRINTS PR00834 HtrA/DegQ protease family signature 178 195 1.06E-6 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS19040 af42b56eb4be610a8a7eccc8d0402076 361 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 1.06E-6 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS19040 af42b56eb4be610a8a7eccc8d0402076 361 PRINTS PR00834 HtrA/DegQ protease family signature 80 92 1.06E-6 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS19040 af42b56eb4be610a8a7eccc8d0402076 361 PANTHER PTHR22939 34 229 1.7E-18 T 22-04-2016 NHAM_RS08545 23e66ff571a5eaefd6df3018b134b991 251 PANTHER PTHR24220 24 251 7.6E-89 T 22-04-2016 NHAM_RS08545 23e66ff571a5eaefd6df3018b134b991 251 Pfam PF00005 ABC transporter 38 179 3.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS08545 23e66ff571a5eaefd6df3018b134b991 251 Gene3D G3DSA:3.40.50.300 21 242 1.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08545 23e66ff571a5eaefd6df3018b134b991 251 SUPERFAMILY SSF52540 22 245 1.78E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08545 23e66ff571a5eaefd6df3018b134b991 251 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS08545 23e66ff571a5eaefd6df3018b134b991 251 PANTHER PTHR24220:SF568 24 251 7.6E-89 T 22-04-2016 NHAM_RS08545 23e66ff571a5eaefd6df3018b134b991 251 SMART SM00382 47 231 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS10390 e82edf4530a2439d02c3840269a73952 136 Pfam PF07883 Cupin domain 43 104 4.6E-13 T 22-04-2016 IPR013096 Cupin 2, conserved barrel NHAM_RS10390 e82edf4530a2439d02c3840269a73952 136 SUPERFAMILY SSF51182 9 131 2.18E-31 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS10390 e82edf4530a2439d02c3840269a73952 136 PANTHER PTHR33570 1 130 4.6E-49 T 22-04-2016 NHAM_RS10390 e82edf4530a2439d02c3840269a73952 136 PANTHER PTHR33570:SF5 1 130 4.6E-49 T 22-04-2016 NHAM_RS10390 e82edf4530a2439d02c3840269a73952 136 Gene3D G3DSA:2.60.120.10 9 131 5.6E-33 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS00240 3234ea7382f67c94521d4c51dab66491 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 24 251 4.3E-79 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 NHAM_RS00240 3234ea7382f67c94521d4c51dab66491 253 Gene3D G3DSA:3.40.50.150 23 252 1.1E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS00240 3234ea7382f67c94521d4c51dab66491 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 35 50 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 NHAM_RS00240 3234ea7382f67c94521d4c51dab66491 253 PANTHER PTHR10108 7 251 5.3E-120 T 22-04-2016 NHAM_RS00240 3234ea7382f67c94521d4c51dab66491 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 15 252 36.949 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 NHAM_RS00240 3234ea7382f67c94521d4c51dab66491 253 PANTHER PTHR10108:SF24 7 251 5.3E-120 T 22-04-2016 NHAM_RS00240 3234ea7382f67c94521d4c51dab66491 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 20 251 3.0E-82 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 NHAM_RS00240 3234ea7382f67c94521d4c51dab66491 253 SUPERFAMILY SSF53335 21 250 1.88E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS00240 3234ea7382f67c94521d4c51dab66491 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 160 174 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 PRINTS PR00162 Rieske 2Fe-2S subunit signature 458 469 3.2E-5 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 PRINTS PR00162 Rieske 2Fe-2S subunit signature 491 503 3.2E-5 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 PRINTS PR00162 Rieske 2Fe-2S subunit signature 479 491 3.2E-5 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 PANTHER PTHR13847:SF196 1 459 3.6E-102 T 22-04-2016 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 Gene3D G3DSA:3.50.50.60 341 390 1.3E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 Gene3D G3DSA:3.50.50.60 21 121 1.3E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 Gene3D G3DSA:3.50.50.60 170 251 1.3E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 SUPERFAMILY SSF50022 415 505 1.83E-22 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 Gene3D G3DSA:2.102.10.10 398 507 2.2E-23 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 SUPERFAMILY SSF51905 290 382 3.02E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 SUPERFAMILY SSF51905 11 250 3.02E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 PANTHER PTHR13847 1 459 3.6E-102 T 22-04-2016 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 Pfam PF00355 Rieske [2Fe-2S] domain 429 503 7.7E-10 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS20075 c20f92de25c003a1ebd0e93d5b9976b7 510 Pfam PF01266 FAD dependent oxidoreductase 32 372 5.1E-45 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NHAM_RS14765 1bdb37cfaac8902d403aa0242c05788d 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 NHAM_RS14765 1bdb37cfaac8902d403aa0242c05788d 158 SUPERFAMILY SSF54534 82 157 2.75E-22 T 22-04-2016 NHAM_RS14765 1bdb37cfaac8902d403aa0242c05788d 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 2.3E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 NHAM_RS14765 1bdb37cfaac8902d403aa0242c05788d 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 1.6E-30 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 NHAM_RS14765 1bdb37cfaac8902d403aa0242c05788d 158 Gene3D G3DSA:3.10.50.30 77 157 1.2E-29 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 NHAM_RS14765 1bdb37cfaac8902d403aa0242c05788d 158 SUPERFAMILY SSF46557 3 77 5.75E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 NHAM_RS14765 1bdb37cfaac8902d403aa0242c05788d 158 PANTHER PTHR30437 3 158 2.0E-65 T 22-04-2016 NHAM_RS14765 1bdb37cfaac8902d403aa0242c05788d 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 6 156 9.9E-59 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 NHAM_RS14765 1bdb37cfaac8902d403aa0242c05788d 158 PIRSF PIRSF006092 1 158 1.2E-52 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 NHAM_RS14765 1bdb37cfaac8902d403aa0242c05788d 158 Gene3D G3DSA:1.10.287.180 3 76 2.2E-32 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 NHAM_RS14765 1bdb37cfaac8902d403aa0242c05788d 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 31.865 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 NHAM_RS14195 fea97ba52061b180e0fd12f80d6847ea 281 SUPERFAMILY SSF51735 2 258 7.73E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14195 fea97ba52061b180e0fd12f80d6847ea 281 PANTHER PTHR10366 2 241 1.0E-25 T 22-04-2016 NHAM_RS14195 fea97ba52061b180e0fd12f80d6847ea 281 Gene3D G3DSA:3.40.50.720 2 242 5.7E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14195 fea97ba52061b180e0fd12f80d6847ea 281 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 228 3.4E-23 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NHAM_RS13090 79b94232800039c9a3767c483d92e927 497 Pfam PF00171 Aldehyde dehydrogenase family 16 478 2.1E-139 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS13090 79b94232800039c9a3767c483d92e927 497 PANTHER PTHR11699 1 493 7.6E-302 T 22-04-2016 NHAM_RS13090 79b94232800039c9a3767c483d92e927 497 Gene3D G3DSA:3.40.605.10 3 260 3.8E-88 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NHAM_RS13090 79b94232800039c9a3767c483d92e927 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NHAM_RS13090 79b94232800039c9a3767c483d92e927 497 PANTHER PTHR11699:SF189 1 493 7.6E-302 T 22-04-2016 NHAM_RS13090 79b94232800039c9a3767c483d92e927 497 SUPERFAMILY SSF53720 2 482 5.37E-149 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NHAM_RS13090 79b94232800039c9a3767c483d92e927 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 482 6.5E-198 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 NHAM_RS13090 79b94232800039c9a3767c483d92e927 497 Gene3D G3DSA:3.40.309.10 261 443 2.6E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 Gene3D G3DSA:1.25.40.10 857 1025 7.8E-47 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 SUPERFAMILY SSF81901 857 1013 4.45E-37 T 22-04-2016 NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 PANTHER PTHR11102:SF11 844 1014 1.2E-50 T 22-04-2016 NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 PANTHER PTHR11102:SF11 6 51 1.2E-50 T 22-04-2016 NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 Pfam PF08238 Sel1 repeat 974 1009 3.4E-7 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 Pfam PF08238 Sel1 repeat 903 937 6.7E-6 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 Pfam PF08238 Sel1 repeat 938 972 2.8E-4 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 Pfam PF08238 Sel1 repeat 866 900 3.3E-4 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 PANTHER PTHR11102 844 1014 1.2E-50 T 22-04-2016 NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 PANTHER PTHR11102 6 51 1.2E-50 T 22-04-2016 NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 SMART SM00671 938 973 0.0097 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 SMART SM00671 974 1009 3.1E-10 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 SMART SM00671 902 937 3.6E-7 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 SMART SM00671 866 901 1.0E-6 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS01250 21ec9bd6a1f71da711a877cfa8d4bea8 1086 Gene3D G3DSA:1.20.1650.10 357 424 9.9E-5 T 22-04-2016 NHAM_RS14420 d16004b7510052bb7c31b6fedb763ef9 212 PANTHER PTHR21343:SF0 3 196 8.2E-48 T 22-04-2016 NHAM_RS14420 d16004b7510052bb7c31b6fedb763ef9 212 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 157 1.2E-36 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 NHAM_RS14420 d16004b7510052bb7c31b6fedb763ef9 212 SUPERFAMILY SSF52540 4 194 2.98E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14420 d16004b7510052bb7c31b6fedb763ef9 212 PIRSF PIRSF006755 1 209 1.0E-49 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 NHAM_RS14420 d16004b7510052bb7c31b6fedb763ef9 212 Pfam PF13500 AAA domain 4 191 2.5E-47 T 22-04-2016 NHAM_RS14420 d16004b7510052bb7c31b6fedb763ef9 212 PANTHER PTHR21343 3 196 8.2E-48 T 22-04-2016 NHAM_RS14420 d16004b7510052bb7c31b6fedb763ef9 212 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 187 25.331 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 NHAM_RS14420 d16004b7510052bb7c31b6fedb763ef9 212 Gene3D G3DSA:3.40.50.300 3 195 5.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 27 156 2.0E-26 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 Gene3D G3DSA:3.40.120.10 193 268 7.1E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 PANTHER PTHR22573:SF28 4 496 2.6E-178 T 22-04-2016 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 Gene3D G3DSA:3.40.120.10 26 153 5.5E-25 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 SUPERFAMILY SSF55957 390 488 1.16E-14 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 SUPERFAMILY SSF53738 278 387 1.49E-17 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 Gene3D G3DSA:3.40.120.10 269 390 2.9E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 PANTHER PTHR22573 4 496 2.6E-178 T 22-04-2016 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 278 390 2.7E-16 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 Gene3D G3DSA:3.30.310.50 392 488 1.8E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 176 272 5.1E-25 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 223 236 4.0E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 189 208 4.0E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 252 267 4.0E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 115 129 4.0E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 415 486 7.5E-7 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 SUPERFAMILY SSF53738 175 273 9.42E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS02375 72e7025101e6bb92fc52441593638f1a 499 SUPERFAMILY SSF53738 20 158 4.71E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NHAM_RS12510 a4cf7fd868f397657e5bcfc9d42bffa7 142 PANTHER PTHR23089 4 112 2.9E-40 T 22-04-2016 IPR001310 Histidine triad (HIT) protein NHAM_RS12510 a4cf7fd868f397657e5bcfc9d42bffa7 142 Pfam PF01230 HIT domain 15 111 5.5E-26 T 22-04-2016 IPR001310 Histidine triad (HIT) protein NHAM_RS12510 a4cf7fd868f397657e5bcfc9d42bffa7 142 Gene3D G3DSA:3.30.428.10 3 112 4.6E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 NHAM_RS12510 a4cf7fd868f397657e5bcfc9d42bffa7 142 PRINTS PR00332 Histidine triad family signature 9 25 7.9E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein NHAM_RS12510 a4cf7fd868f397657e5bcfc9d42bffa7 142 PRINTS PR00332 Histidine triad family signature 30 48 7.9E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein NHAM_RS12510 a4cf7fd868f397657e5bcfc9d42bffa7 142 PRINTS PR00332 Histidine triad family signature 97 107 7.9E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein NHAM_RS12510 a4cf7fd868f397657e5bcfc9d42bffa7 142 SUPERFAMILY SSF54197 3 138 5.41E-39 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 NHAM_RS10220 06adc15f116226841668c1123d6279b8 263 Pfam PF01026 TatD related DNase 3 254 2.8E-78 T 22-04-2016 IPR001130 TatD family GO:0016788 NHAM_RS10220 06adc15f116226841668c1123d6279b8 263 PANTHER PTHR10060 1 257 3.2E-117 T 22-04-2016 IPR001130 TatD family GO:0016788 NHAM_RS10220 06adc15f116226841668c1123d6279b8 263 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 NHAM_RS10220 06adc15f116226841668c1123d6279b8 263 Gene3D G3DSA:3.20.20.140 1 254 6.3E-89 T 22-04-2016 NHAM_RS10220 06adc15f116226841668c1123d6279b8 263 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 NHAM_RS10220 06adc15f116226841668c1123d6279b8 263 PIRSF PIRSF005902 1 257 1.0E-77 T 22-04-2016 IPR001130 TatD family GO:0016788 NHAM_RS10220 06adc15f116226841668c1123d6279b8 263 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 1.7E-79 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 NHAM_RS10220 06adc15f116226841668c1123d6279b8 263 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 NHAM_RS10220 06adc15f116226841668c1123d6279b8 263 SUPERFAMILY SSF51556 2 254 6.63E-87 T 22-04-2016 IPR032466 Metal-dependent hydrolase NHAM_RS10220 06adc15f116226841668c1123d6279b8 263 PANTHER PTHR10060:SF20 1 257 3.2E-117 T 22-04-2016 NHAM_RS15410 b51e18c36f0204433c2122b54ef0567a 145 SUPERFAMILY SSF48295 15 68 2.41E-12 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS15410 b51e18c36f0204433c2122b54ef0567a 145 PANTHER PTHR37936 2 145 4.3E-38 T 22-04-2016 NHAM_RS15410 b51e18c36f0204433c2122b54ef0567a 145 Pfam PF01527 Transposase 23 88 3.7E-19 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NHAM_RS15410 b51e18c36f0204433c2122b54ef0567a 145 Gene3D G3DSA:1.10.10.10 23 68 1.0E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS06995 84b1892af7bc126706ab0c4bea793ca9 369 Pfam PF14462 Prokaryotic E2 family E 245 365 7.1E-42 T 22-04-2016 IPR025701 Ubiquitin-conjugating enzyme, E2, family E NHAM_RS06995 84b1892af7bc126706ab0c4bea793ca9 369 Pfam PF14452 Multiubiquitin 27 86 2.9E-12 T 22-04-2016 IPR027802 Multi-ubiquitin domain NHAM_RS06995 84b1892af7bc126706ab0c4bea793ca9 369 Pfam PF14452 Multiubiquitin 92 157 7.9E-17 T 22-04-2016 IPR027802 Multi-ubiquitin domain NHAM_RS03895 99ca9064ab46a185a29d3a2c0f011e71 358 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 2 198 1.0E-66 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS03895 99ca9064ab46a185a29d3a2c0f011e71 358 PIRSF PIRSF001259 1 357 5.4E-107 T 22-04-2016 NHAM_RS03895 99ca9064ab46a185a29d3a2c0f011e71 358 SUPERFAMILY SSF55821 3 201 4.81E-76 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain NHAM_RS03895 99ca9064ab46a185a29d3a2c0f011e71 358 Gene3D G3DSA:3.90.870.10 3 210 8.2E-89 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain NHAM_RS03895 99ca9064ab46a185a29d3a2c0f011e71 358 Pfam PF00925 GTP cyclohydrolase II 206 352 1.2E-16 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 NHAM_RS03895 99ca9064ab46a185a29d3a2c0f011e71 358 SUPERFAMILY SSF142695 203 354 1.96E-36 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 NHAM_RS03895 99ca9064ab46a185a29d3a2c0f011e71 358 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 197 1.2E-78 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS03895 99ca9064ab46a185a29d3a2c0f011e71 358 PANTHER PTHR21327:SF10 1 350 2.5E-201 T 22-04-2016 NHAM_RS03895 99ca9064ab46a185a29d3a2c0f011e71 358 PANTHER PTHR21327 1 350 2.5E-201 T 22-04-2016 NHAM_RS08550 8bff9a433ec050d4399d18d777b08eb2 409 Gene3D G3DSA:3.40.50.2300 162 298 3.0E-14 T 22-04-2016 NHAM_RS08550 8bff9a433ec050d4399d18d777b08eb2 409 Gene3D G3DSA:3.40.50.2300 28 155 7.5E-25 T 22-04-2016 NHAM_RS08550 8bff9a433ec050d4399d18d777b08eb2 409 Gene3D G3DSA:3.40.50.2300 299 359 7.5E-25 T 22-04-2016 NHAM_RS08550 8bff9a433ec050d4399d18d777b08eb2 409 PANTHER PTHR30483:SF17 1 409 1.4E-220 T 22-04-2016 NHAM_RS08550 8bff9a433ec050d4399d18d777b08eb2 409 SUPERFAMILY SSF53822 32 407 1.88E-85 T 22-04-2016 IPR028082 Periplasmic binding protein-like I NHAM_RS08550 8bff9a433ec050d4399d18d777b08eb2 409 Pfam PF13458 Periplasmic binding protein 32 372 5.1E-83 T 22-04-2016 IPR028081 Leucine-binding protein domain NHAM_RS08550 8bff9a433ec050d4399d18d777b08eb2 409 PANTHER PTHR30483 1 409 1.4E-220 T 22-04-2016 NHAM_RS07870 40dda47760b72530d2ed1781ef421577 378 Gene3D G3DSA:3.40.630.30 196 295 4.2E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS07870 40dda47760b72530d2ed1781ef421577 378 Pfam PF13480 Acetyltransferase (GNAT) domain 168 305 1.2E-25 T 22-04-2016 NHAM_RS07870 40dda47760b72530d2ed1781ef421577 378 SUPERFAMILY SSF55729 168 296 1.35E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS04130 d0b9abfb80f3bf6f45c08b5439f1b981 165 Pfam PF11149 Protein of unknown function (DUF2924) 16 150 4.0E-44 T 22-04-2016 IPR021322 Protein of unknown function DUF2924 NHAM_RS03645 a8698a4a4816de80aeab9cabc7bdba6d 265 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 46 215 1.5E-28 T 22-04-2016 IPR003734 Domain of unknown function DUF155 NHAM_RS03645 a8698a4a4816de80aeab9cabc7bdba6d 265 PANTHER PTHR16255 43 262 2.8E-33 T 22-04-2016 NHAM_RS05495 ed3fa3125ad57a4783657e9b5d67310a 255 SUPERFAMILY SSF52821 92 227 1.51E-28 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS05495 ed3fa3125ad57a4783657e9b5d67310a 255 PANTHER PTHR22778:SF12 1 238 4.7E-88 T 22-04-2016 NHAM_RS05495 ed3fa3125ad57a4783657e9b5d67310a 255 Gene3D G3DSA:3.40.250.10 105 228 1.1E-36 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS05495 ed3fa3125ad57a4783657e9b5d67310a 255 SMART SM00450 115 216 7.0E-17 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS05495 ed3fa3125ad57a4783657e9b5d67310a 255 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 255 37.891 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 NHAM_RS05495 ed3fa3125ad57a4783657e9b5d67310a 255 PANTHER PTHR22778 1 238 4.7E-88 T 22-04-2016 NHAM_RS05495 ed3fa3125ad57a4783657e9b5d67310a 255 Pfam PF00581 Rhodanese-like domain 119 210 2.5E-5 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS10205 0478c44353ea5bc038cf3b610b9bc6b4 108 SUPERFAMILY SSF103481 8 106 1.19E-7 T 22-04-2016 NHAM_RS10205 0478c44353ea5bc038cf3b610b9bc6b4 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 106 1.8E-33 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 NHAM_RS10205 0478c44353ea5bc038cf3b610b9bc6b4 108 PANTHER PTHR36116:SF1 1 106 1.8E-44 T 22-04-2016 NHAM_RS10205 0478c44353ea5bc038cf3b610b9bc6b4 108 PANTHER PTHR36116 1 106 1.8E-44 T 22-04-2016 NHAM_RS10205 0478c44353ea5bc038cf3b610b9bc6b4 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 106 25.532 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 NHAM_RS16560 d14bd84bce8835be87e8f34ab28cfa54 142 PANTHER PTHR35813 14 142 1.7E-33 T 22-04-2016 NHAM_RS16560 d14bd84bce8835be87e8f34ab28cfa54 142 PANTHER PTHR35813:SF1 14 142 1.7E-33 T 22-04-2016 NHAM_RS16560 d14bd84bce8835be87e8f34ab28cfa54 142 Pfam PF04304 Protein of unknown function (DUF454) 27 141 4.0E-37 T 22-04-2016 IPR007401 Protein of unknown function DUF454 NHAM_RS16560 d14bd84bce8835be87e8f34ab28cfa54 142 PIRSF PIRSF016789 26 142 1.5E-37 T 22-04-2016 IPR007401 Protein of unknown function DUF454 NHAM_RS15615 2fbdcba32ca67ce0da9e2876db084a74 305 Gene3D G3DSA:3.90.550.10 6 224 4.8E-42 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS15615 2fbdcba32ca67ce0da9e2876db084a74 305 SUPERFAMILY SSF53448 3 230 2.34E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS15615 2fbdcba32ca67ce0da9e2876db084a74 305 PANTHER PTHR22916 1 301 7.7E-38 T 22-04-2016 NHAM_RS15615 2fbdcba32ca67ce0da9e2876db084a74 305 Pfam PF00535 Glycosyl transferase family 2 9 156 3.0E-25 T 22-04-2016 IPR001173 Glycosyltransferase 2-like NHAM_RS10190 1f1998431ea13d723fc6fd5a9cb5f9bd 443 SUPERFAMILY SSF52540 35 123 6.28E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10190 1f1998431ea13d723fc6fd5a9cb5f9bd 443 SUPERFAMILY SSF52540 240 369 6.28E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10190 1f1998431ea13d723fc6fd5a9cb5f9bd 443 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 8 409 7.5E-160 T 22-04-2016 IPR021228 Protein of unknown function DUF2791 NHAM_RS10190 1f1998431ea13d723fc6fd5a9cb5f9bd 443 Gene3D G3DSA:3.40.50.300 204 294 4.0E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10190 1f1998431ea13d723fc6fd5a9cb5f9bd 443 Gene3D G3DSA:3.40.50.300 36 155 4.0E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11680 90e09f890c3b384ace63574f0f4ccf69 211 PANTHER PTHR36926 2 207 2.7E-65 T 22-04-2016 NHAM_RS11680 90e09f890c3b384ace63574f0f4ccf69 211 PANTHER PTHR36926:SF1 2 207 2.7E-65 T 22-04-2016 NHAM_RS11680 90e09f890c3b384ace63574f0f4ccf69 211 Pfam PF02674 Colicin V production protein 6 148 9.4E-29 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 NHAM_RS01970 a6a0ffb27a12ac24689e88179249cd27 184 Pfam PF00034 Cytochrome c 76 171 9.9E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS01970 a6a0ffb27a12ac24689e88179249cd27 184 PRINTS PR00604 Class IA and IB cytochrome C signature 163 171 3.6E-20 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS01970 a6a0ffb27a12ac24689e88179249cd27 184 PRINTS PR00604 Class IA and IB cytochrome C signature 84 91 3.6E-20 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS01970 a6a0ffb27a12ac24689e88179249cd27 184 PRINTS PR00604 Class IA and IB cytochrome C signature 146 156 3.6E-20 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS01970 a6a0ffb27a12ac24689e88179249cd27 184 PRINTS PR00604 Class IA and IB cytochrome C signature 97 112 3.6E-20 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS01970 a6a0ffb27a12ac24689e88179249cd27 184 PRINTS PR00604 Class IA and IB cytochrome C signature 127 143 3.6E-20 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS01970 a6a0ffb27a12ac24689e88179249cd27 184 PRINTS PR00604 Class IA and IB cytochrome C signature 113 123 3.6E-20 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS01970 a6a0ffb27a12ac24689e88179249cd27 184 PANTHER PTHR11961 1 182 2.2E-45 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 NHAM_RS01970 a6a0ffb27a12ac24689e88179249cd27 184 Gene3D G3DSA:1.10.760.10 72 174 8.8E-39 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS01970 a6a0ffb27a12ac24689e88179249cd27 184 SUPERFAMILY SSF46626 72 174 4.07E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS18645 e6dfe033567acb41982f3d87e7301c72 170 Pfam PF10029 Predicted periplasmic protein (DUF2271) 22 162 1.2E-50 T 22-04-2016 IPR014469 Protein of unknown function DUF2271 NHAM_RS18645 e6dfe033567acb41982f3d87e7301c72 170 PIRSF PIRSF014995 1 170 4.9E-61 T 22-04-2016 IPR014469 Protein of unknown function DUF2271 NHAM_RS16565 094600905b7d80dba3d429e8a4150d8d 186 PANTHER PTHR34478:SF1 1 186 1.7E-98 T 22-04-2016 NHAM_RS16565 094600905b7d80dba3d429e8a4150d8d 186 Gene3D G3DSA:1.20.1440.20 13 186 2.7E-65 T 22-04-2016 IPR023353 LemA-like domain NHAM_RS16565 094600905b7d80dba3d429e8a4150d8d 186 Pfam PF04011 LemA family 6 186 5.0E-68 T 22-04-2016 IPR007156 LemA NHAM_RS16565 094600905b7d80dba3d429e8a4150d8d 186 SUPERFAMILY SSF140478 25 171 2.09E-55 T 22-04-2016 IPR023353 LemA-like domain NHAM_RS16565 094600905b7d80dba3d429e8a4150d8d 186 PANTHER PTHR34478 1 186 1.7E-98 T 22-04-2016 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 70 90 1.0E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 178 198 1.0E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 51 70 1.0E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 199 220 1.0E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 1.0E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 223 248 1.0E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 Pfam PF00813 FliP family 53 245 4.3E-80 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PANTHER PTHR30587:SF0 8 251 7.2E-120 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 53 249 4.8E-89 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 109 121 1.0E-25 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 149 161 1.0E-25 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 171 183 1.0E-25 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 49 58 1.0E-25 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 121 135 1.0E-25 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 239 249 1.0E-25 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 178 193 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 226 238 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NHAM_RS07095 597de6ecfaa1ac919801d55a69bfefd0 251 PANTHER PTHR30587 8 251 7.2E-120 T 22-04-2016 NHAM_RS13985 99625a68f1ad6c057a6922ec26c98f08 178 PANTHER PTHR22778:SF16 10 176 4.2E-40 T 22-04-2016 NHAM_RS13985 99625a68f1ad6c057a6922ec26c98f08 178 PIRSF PIRSF000194 5 177 2.5E-61 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NHAM_RS13985 99625a68f1ad6c057a6922ec26c98f08 178 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 22 44 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NHAM_RS13985 99625a68f1ad6c057a6922ec26c98f08 178 PRINTS PR00070 Dihydrofolate reductase signature 36 44 2.1E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NHAM_RS13985 99625a68f1ad6c057a6922ec26c98f08 178 PRINTS PR00070 Dihydrofolate reductase signature 22 32 2.1E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NHAM_RS13985 99625a68f1ad6c057a6922ec26c98f08 178 PRINTS PR00070 Dihydrofolate reductase signature 49 60 2.1E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NHAM_RS13985 99625a68f1ad6c057a6922ec26c98f08 178 PRINTS PR00070 Dihydrofolate reductase signature 106 120 2.1E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NHAM_RS13985 99625a68f1ad6c057a6922ec26c98f08 178 PANTHER PTHR22778 10 176 4.2E-40 T 22-04-2016 NHAM_RS13985 99625a68f1ad6c057a6922ec26c98f08 178 Pfam PF00186 Dihydrofolate reductase 11 174 2.4E-54 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NHAM_RS13985 99625a68f1ad6c057a6922ec26c98f08 178 Gene3D G3DSA:3.40.430.10 7 175 1.8E-57 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain NHAM_RS13985 99625a68f1ad6c057a6922ec26c98f08 178 SUPERFAMILY SSF53597 10 175 4.68E-53 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain NHAM_RS17370 507af34b30fc0e0c41dcf7bdd0908209 228 PANTHER PTHR24032:SF31 1 153 1.3E-16 T 22-04-2016 NHAM_RS17370 507af34b30fc0e0c41dcf7bdd0908209 228 Gene3D G3DSA:3.60.21.10 4 204 1.1E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS17370 507af34b30fc0e0c41dcf7bdd0908209 228 Pfam PF00149 Calcineurin-like phosphoesterase 5 175 3.3E-9 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NHAM_RS17370 507af34b30fc0e0c41dcf7bdd0908209 228 SUPERFAMILY SSF56300 4 204 1.45E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS17370 507af34b30fc0e0c41dcf7bdd0908209 228 PANTHER PTHR24032 1 153 1.3E-16 T 22-04-2016 NHAM_RS13980 b1f7bd5e092f86c4ec7981b7d32c03cb 385 Pfam PF01145 SPFH domain / Band 7 family 77 272 2.0E-23 T 22-04-2016 IPR001107 Band 7 domain NHAM_RS13980 b1f7bd5e092f86c4ec7981b7d32c03cb 385 PANTHER PTHR10264:SF51 1 127 2.0E-125 T 22-04-2016 IPR010201 HflK GO:0016021 NHAM_RS13980 b1f7bd5e092f86c4ec7981b7d32c03cb 385 PANTHER PTHR10264:SF51 148 375 2.0E-125 T 22-04-2016 IPR010201 HflK GO:0016021 NHAM_RS13980 b1f7bd5e092f86c4ec7981b7d32c03cb 385 TIGRFAM TIGR01933 hflK: HflK protein 76 349 7.0E-80 T 22-04-2016 IPR010201 HflK GO:0016021 NHAM_RS13980 b1f7bd5e092f86c4ec7981b7d32c03cb 385 PANTHER PTHR10264 1 127 2.0E-125 T 22-04-2016 IPR001972 Stomatin family GO:0016020 NHAM_RS13980 b1f7bd5e092f86c4ec7981b7d32c03cb 385 PANTHER PTHR10264 148 375 2.0E-125 T 22-04-2016 IPR001972 Stomatin family GO:0016020 NHAM_RS13980 b1f7bd5e092f86c4ec7981b7d32c03cb 385 Pfam PF12221 Bacterial membrane protein N terminal 1 52 8.7E-9 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal NHAM_RS13980 b1f7bd5e092f86c4ec7981b7d32c03cb 385 SUPERFAMILY SSF117892 140 259 1.7E-18 T 22-04-2016 IPR001107 Band 7 domain NHAM_RS13980 b1f7bd5e092f86c4ec7981b7d32c03cb 385 SMART SM00244 73 256 5.3E-26 T 22-04-2016 IPR001107 Band 7 domain NHAM_RS17965 d728565c8183d1397c0ed3b7203227e3 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 169 1.1E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS17965 d728565c8183d1397c0ed3b7203227e3 699 Pfam PF00593 TonB dependent receptor 476 697 1.7E-27 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS17965 d728565c8183d1397c0ed3b7203227e3 699 Gene3D G3DSA:2.170.130.10 29 175 4.9E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS17965 d728565c8183d1397c0ed3b7203227e3 699 SUPERFAMILY SSF56935 58 699 7.81E-106 T 22-04-2016 NHAM_RS17965 d728565c8183d1397c0ed3b7203227e3 699 PANTHER PTHR32552 60 437 5.9E-46 T 22-04-2016 NHAM_RS17965 d728565c8183d1397c0ed3b7203227e3 699 PANTHER PTHR32552 3 39 5.9E-46 T 22-04-2016 NHAM_RS17965 d728565c8183d1397c0ed3b7203227e3 699 PANTHER PTHR32552 462 699 5.9E-46 T 22-04-2016 NHAM_RS17965 d728565c8183d1397c0ed3b7203227e3 699 Gene3D G3DSA:2.40.170.20 176 699 4.7E-74 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS18065 aea86982364fee27cc75d457f5123b6f 153 SUPERFAMILY SSF54637 17 149 3.91E-35 T 22-04-2016 IPR029069 HotDog domain NHAM_RS18065 aea86982364fee27cc75d457f5123b6f 153 PANTHER PTHR31793:SF9 14 150 1.2E-38 T 22-04-2016 NHAM_RS18065 aea86982364fee27cc75d457f5123b6f 153 PANTHER PTHR31793 14 150 1.2E-38 T 22-04-2016 NHAM_RS18065 aea86982364fee27cc75d457f5123b6f 153 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 19 145 2.3E-46 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- NHAM_RS18065 aea86982364fee27cc75d457f5123b6f 153 Pfam PF03061 Thioesterase superfamily 34 120 3.8E-15 T 22-04-2016 IPR006683 Thioesterase domain NHAM_RS18065 aea86982364fee27cc75d457f5123b6f 153 PIRSF PIRSF003230 11 153 7.4E-41 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 NHAM_RS18065 aea86982364fee27cc75d457f5123b6f 153 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 23 140 2.2E-27 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 NHAM_RS18065 aea86982364fee27cc75d457f5123b6f 153 Gene3D G3DSA:3.10.129.10 15 149 1.6E-45 T 22-04-2016 IPR029069 HotDog domain NHAM_RS11735 52357f3803691111c3f708024dc5587a 565 SUPERFAMILY SSF51261 413 521 1.67E-7 T 22-04-2016 IPR011055 Duplicated hybrid motif NHAM_RS11735 52357f3803691111c3f708024dc5587a 565 Gene3D G3DSA:2.70.70.10 371 520 1.8E-10 T 22-04-2016 NHAM_RS11735 52357f3803691111c3f708024dc5587a 565 Pfam PF01551 Peptidase family M23 414 506 1.2E-7 T 22-04-2016 IPR016047 Peptidase M23 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 Gene3D G3DSA:1.10.287.610 102 154 6.8E-22 T 22-04-2016 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 227 40.269 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 160 184 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 Gene3D G3DSA:3.40.50.10490 160 236 1.9E-62 T 22-04-2016 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 Gene3D G3DSA:3.40.50.10490 25 101 1.9E-62 T 22-04-2016 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 SUPERFAMILY SSF52313 8 233 2.49E-92 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 7 226 1.3E-96 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 PANTHER PTHR12534 6 271 1.4E-118 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 Pfam PF00318 Ribosomal protein S2 11 226 4.1E-93 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 PRINTS PR00395 Ribosomal protein S2 signature 8 26 1.4E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 PRINTS PR00395 Ribosomal protein S2 signature 177 188 1.4E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 PRINTS PR00395 Ribosomal protein S2 signature 198 212 1.4E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 PRINTS PR00395 Ribosomal protein S2 signature 160 177 1.4E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 PRINTS PR00395 Ribosomal protein S2 signature 89 106 1.4E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08650 97c80aa9abc84924658875a4c7b53cee 332 PRINTS PR00395 Ribosomal protein S2 signature 39 48 1.4E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 PANTHER PTHR11102 321 454 2.0E-93 T 22-04-2016 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 PANTHER PTHR11102 563 679 2.0E-93 T 22-04-2016 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 PANTHER PTHR11102 137 277 2.0E-93 T 22-04-2016 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SUPERFAMILY SSF81901 466 666 2.62E-45 T 22-04-2016 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 PANTHER PTHR11102:SF11 321 454 2.0E-93 T 22-04-2016 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 PANTHER PTHR11102:SF11 563 679 2.0E-93 T 22-04-2016 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 PANTHER PTHR11102:SF11 137 277 2.0E-93 T 22-04-2016 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SUPERFAMILY SSF81901 285 492 1.13E-45 T 22-04-2016 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SUPERFAMILY SSF81901 135 312 1.48E-40 T 22-04-2016 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 136 157 130.0 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 232 266 9.1E-4 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 412 445 6.5E-7 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 88 101 19.0 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 520 554 2.7 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 269 301 0.25 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 195 230 7.7E-8 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 627 662 1.2E-6 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 52 86 0.1 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 340 374 4.8E-8 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 556 590 1.0E-6 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 593 625 1.9E-9 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 375 409 1.7E-8 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 483 518 0.0054 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 309 338 9.7E-5 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Pfam PF08238 Sel1 repeat 159 193 7.8E-6 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 159 194 2.6E-7 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 411 446 2.4E-7 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 231 266 2.2E-4 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 555 590 1.2E-6 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 627 662 3.7E-9 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 375 410 1.9E-7 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 51 86 0.016 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 267 302 0.072 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 483 518 0.0076 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 195 230 3.3E-11 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 519 554 0.032 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 303 338 5.0E-4 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 591 626 6.2E-8 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SMART SM00671 339 374 2.2E-9 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 SUPERFAMILY SSF81901 28 100 9.42E-15 T 22-04-2016 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Gene3D G3DSA:1.25.40.10 25 264 2.2E-56 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Gene3D G3DSA:1.25.40.10 468 672 9.4E-53 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS05365 07dbe8a267cccbd18af3ace9ca26cc15 679 Gene3D G3DSA:1.25.40.10 265 459 9.7E-55 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS19880 2b0cc2cdf293788b68919889ea6ab0ed 131 PANTHER PTHR41553 2 131 3.8E-33 T 22-04-2016 NHAM_RS19880 2b0cc2cdf293788b68919889ea6ab0ed 131 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 12 127 1.1E-23 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III NHAM_RS19880 2b0cc2cdf293788b68919889ea6ab0ed 131 PANTHER PTHR41553:SF1 2 131 3.8E-33 T 22-04-2016 NHAM_RS04195 d37607cf7185579a9def7499c0935a5e 69 SMART SM00357 3 69 3.3E-24 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS04195 d37607cf7185579a9def7499c0935a5e 69 PRINTS PR00050 Cold shock protein signature 40 58 2.6E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS04195 d37607cf7185579a9def7499c0935a5e 69 PRINTS PR00050 Cold shock protein signature 4 19 2.6E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS04195 d37607cf7185579a9def7499c0935a5e 69 PRINTS PR00050 Cold shock protein signature 25 34 2.6E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS04195 d37607cf7185579a9def7499c0935a5e 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site NHAM_RS04195 d37607cf7185579a9def7499c0935a5e 69 PIRSF PIRSF002599 1 69 3.2E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 NHAM_RS04195 d37607cf7185579a9def7499c0935a5e 69 Gene3D G3DSA:2.40.50.140 1 67 1.8E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS04195 d37607cf7185579a9def7499c0935a5e 69 SUPERFAMILY SSF50249 1 68 9.21E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS04195 d37607cf7185579a9def7499c0935a5e 69 PANTHER PTHR11544 1 51 1.6E-22 T 22-04-2016 NHAM_RS04195 d37607cf7185579a9def7499c0935a5e 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 67 6.2E-24 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS07275 6f94f0ef5dda3c84558b78d0bbfe0c92 298 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 2 163 1.7E-60 T 22-04-2016 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal NHAM_RS07275 6f94f0ef5dda3c84558b78d0bbfe0c92 298 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 23 292 5.0E-92 T 22-04-2016 IPR011928 Bacteriophage phiJL001, Gp84 NHAM_RS07275 6f94f0ef5dda3c84558b78d0bbfe0c92 298 Pfam PF09356 Phage conserved hypothetical protein BR0599 195 277 3.5E-33 T 22-04-2016 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal NHAM_RS14305 44f464b5f8aa461d1d8e0026b2219ab0 523 Pfam PF13817 IS66 C-terminal element 477 514 2.0E-12 T 22-04-2016 NHAM_RS14305 44f464b5f8aa461d1d8e0026b2219ab0 523 Pfam PF13007 Transposase C of IS166 homeodomain 32 109 2.8E-10 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain NHAM_RS14305 44f464b5f8aa461d1d8e0026b2219ab0 523 Pfam PF13005 zinc-finger binding domain of transposase IS66 118 160 5.8E-12 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 NHAM_RS14305 44f464b5f8aa461d1d8e0026b2219ab0 523 PANTHER PTHR33678 11 514 5.3E-80 T 22-04-2016 NHAM_RS14305 44f464b5f8aa461d1d8e0026b2219ab0 523 Pfam PF03050 Transposase IS66 family 181 471 9.6E-93 T 22-04-2016 IPR004291 Transposase, IS66 NHAM_RS14305 44f464b5f8aa461d1d8e0026b2219ab0 523 PANTHER PTHR33678:SF1 11 514 5.3E-80 T 22-04-2016 NHAM_RS13345 3975cc95264085a8ac3e1bc232784d81 148 PANTHER PTHR38588 4 147 9.5E-45 T 22-04-2016 NHAM_RS13345 3975cc95264085a8ac3e1bc232784d81 148 PANTHER PTHR38588:SF1 4 147 9.5E-45 T 22-04-2016 NHAM_RS13345 3975cc95264085a8ac3e1bc232784d81 148 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 7 146 1.1E-42 T 22-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G NHAM_RS13345 3975cc95264085a8ac3e1bc232784d81 148 Gene3D G3DSA:3.30.530.20 3 148 3.4E-60 T 22-04-2016 IPR023393 START-like domain NHAM_RS13345 3975cc95264085a8ac3e1bc232784d81 148 SUPERFAMILY SSF55961 3 147 8.39E-45 T 22-04-2016 NHAM_RS08005 1739d34d860c313617e178acd2975150 161 Gene3D G3DSA:3.100.10.10 32 152 2.9E-28 T 22-04-2016 NHAM_RS08005 1739d34d860c313617e178acd2975150 161 PANTHER PTHR12934 1 151 4.8E-72 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 NHAM_RS08005 1739d34d860c313617e178acd2975150 161 SUPERFAMILY SSF52080 5 150 5.1E-45 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P NHAM_RS08005 1739d34d860c313617e178acd2975150 161 ProSitePatterns PS00475 Ribosomal protein L15 signature. 115 145 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08005 1739d34d860c313617e178acd2975150 161 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 149 6.5E-37 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P NHAM_RS08005 1739d34d860c313617e178acd2975150 161 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 148 2.7E-45 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 NHAM_RS08005 1739d34d860c313617e178acd2975150 161 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 151 21.643 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 NHAM_RS18945 b5dfa5283909193a317d41e6761ef76a 175 PANTHER PTHR10458 1 175 6.6E-68 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NHAM_RS18945 b5dfa5283909193a317d41e6761ef76a 175 PRINTS PR01576 Peptide deformylase signature 108 126 1.6E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NHAM_RS18945 b5dfa5283909193a317d41e6761ef76a 175 PRINTS PR01576 Peptide deformylase signature 96 107 1.6E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NHAM_RS18945 b5dfa5283909193a317d41e6761ef76a 175 PRINTS PR01576 Peptide deformylase signature 127 156 1.6E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NHAM_RS18945 b5dfa5283909193a317d41e6761ef76a 175 PRINTS PR01576 Peptide deformylase signature 33 62 1.6E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NHAM_RS18945 b5dfa5283909193a317d41e6761ef76a 175 Gene3D G3DSA:3.90.45.10 5 171 1.0E-61 T 22-04-2016 IPR023635 Peptide deformylase NHAM_RS18945 b5dfa5283909193a317d41e6761ef76a 175 PIRSF PIRSF004749 1 175 7.7E-54 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NHAM_RS18945 b5dfa5283909193a317d41e6761ef76a 175 SUPERFAMILY SSF56420 2 171 7.59E-61 T 22-04-2016 IPR023635 Peptide deformylase NHAM_RS18945 b5dfa5283909193a317d41e6761ef76a 175 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 166 4.1E-51 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NHAM_RS18945 b5dfa5283909193a317d41e6761ef76a 175 PANTHER PTHR10458:SF10 1 175 6.6E-68 T 22-04-2016 NHAM_RS18945 b5dfa5283909193a317d41e6761ef76a 175 Hamap MF_00163 Peptide deformylase [def]. 2 169 30.342 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 NHAM_RS18945 b5dfa5283909193a317d41e6761ef76a 175 Pfam PF01327 Polypeptide deformylase 4 159 1.6E-51 T 22-04-2016 IPR023635 Peptide deformylase NHAM_RS11465 ff91250f0016e13c9cc0d8c8f3737fe1 305 SUPERFAMILY SSF54814 185 301 8.5E-39 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 NHAM_RS11465 ff91250f0016e13c9cc0d8c8f3737fe1 305 Gene3D G3DSA:3.40.50.300 11 178 1.2E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11465 ff91250f0016e13c9cc0d8c8f3737fe1 305 Gene3D G3DSA:3.30.300.20 193 296 4.7E-38 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta NHAM_RS11465 ff91250f0016e13c9cc0d8c8f3737fe1 305 Pfam PF01926 50S ribosome-binding GTPase 15 129 1.7E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS11465 ff91250f0016e13c9cc0d8c8f3737fe1 305 SUPERFAMILY SSF52540 15 186 6.45E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11465 ff91250f0016e13c9cc0d8c8f3737fe1 305 PANTHER PTHR11649 10 299 1.7E-116 T 22-04-2016 NHAM_RS11465 ff91250f0016e13c9cc0d8c8f3737fe1 305 Hamap MF_00367 GTPase Era [era]. 10 300 33.224 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 NHAM_RS11465 ff91250f0016e13c9cc0d8c8f3737fe1 305 PANTHER PTHR11649:SF3 10 299 1.7E-116 T 22-04-2016 NHAM_RS11465 ff91250f0016e13c9cc0d8c8f3737fe1 305 Pfam PF07650 KH domain 212 288 3.5E-18 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 NHAM_RS11465 ff91250f0016e13c9cc0d8c8f3737fe1 305 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 169 2.3E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 NHAM_RS11465 ff91250f0016e13c9cc0d8c8f3737fe1 305 TIGRFAM TIGR00436 era: GTP-binding protein Era 13 283 4.1E-75 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 NHAM_RS20195 6a11e29d99de81323e4254d1984b9547 341 PANTHER PTHR33055:SF2 3 335 6.6E-125 T 22-04-2016 NHAM_RS20195 6a11e29d99de81323e4254d1984b9547 341 Pfam PF01548 Transposase 7 147 8.3E-14 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS20195 6a11e29d99de81323e4254d1984b9547 341 PANTHER PTHR33055 3 335 6.6E-125 T 22-04-2016 NHAM_RS20195 6a11e29d99de81323e4254d1984b9547 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 1.7E-23 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS06610 232878b0d2b13bffd55a8f2b8f9c87ae 178 PANTHER PTHR23133 5 145 1.3E-49 T 22-04-2016 NHAM_RS06610 232878b0d2b13bffd55a8f2b8f9c87ae 178 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 8 155 4.9E-30 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA NHAM_RS06610 232878b0d2b13bffd55a8f2b8f9c87ae 178 SUPERFAMILY SSF56784 6 161 5.51E-42 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS06610 232878b0d2b13bffd55a8f2b8f9c87ae 178 PIRSF PIRSF004682 1 169 3.5E-55 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 NHAM_RS06610 232878b0d2b13bffd55a8f2b8f9c87ae 178 Gene3D G3DSA:3.40.50.1000 4 159 7.7E-47 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS06610 232878b0d2b13bffd55a8f2b8f9c87ae 178 PANTHER PTHR23133:SF3 5 145 1.3E-49 T 22-04-2016 NHAM_RS06610 232878b0d2b13bffd55a8f2b8f9c87ae 178 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 8 151 9.9E-34 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 NHAM_RS06610 232878b0d2b13bffd55a8f2b8f9c87ae 178 Pfam PF13242 HAD-hyrolase-like 110 158 5.2E-7 T 22-04-2016 NHAM_RS02095 e10b80beb9a7f708117acaec8be01723 292 PANTHER PTHR11079 191 292 1.4E-52 T 22-04-2016 NHAM_RS02095 e10b80beb9a7f708117acaec8be01723 292 PANTHER PTHR11079 12 144 1.4E-52 T 22-04-2016 NHAM_RS02095 e10b80beb9a7f708117acaec8be01723 292 PANTHER PTHR11079:SF60 191 292 1.4E-52 T 22-04-2016 NHAM_RS02095 e10b80beb9a7f708117acaec8be01723 292 PANTHER PTHR11079:SF60 12 144 1.4E-52 T 22-04-2016 NHAM_RS02095 e10b80beb9a7f708117acaec8be01723 292 SUPERFAMILY SSF55120 194 290 5.6E-54 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS02095 e10b80beb9a7f708117acaec8be01723 292 SUPERFAMILY SSF55120 8 145 5.6E-54 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS02095 e10b80beb9a7f708117acaec8be01723 292 Pfam PF00849 RNA pseudouridylate synthase 23 218 2.4E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS02095 e10b80beb9a7f708117acaec8be01723 292 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 61 75 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS19800 43238218b88f3d0110b14cffe3dc56c4 88 SUPERFAMILY SSF47598 17 84 2.0E-16 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 NHAM_RS19800 43238218b88f3d0110b14cffe3dc56c4 88 Gene3D G3DSA:1.10.1220.10 43 81 2.3E-14 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 NHAM_RS01040 ae5ddc68f909aac05ed1f912083448bc 320 Pfam PF12762 ISXO2-like transposase domain 139 285 2.2E-42 T 22-04-2016 IPR024445 ISXO2-like transposase domain NHAM_RS01040 ae5ddc68f909aac05ed1f912083448bc 320 Gene3D G3DSA:2.20.25.10 42 73 1.8E-4 T 22-04-2016 NHAM_RS01040 ae5ddc68f909aac05ed1f912083448bc 320 Pfam PF12760 Transposase zinc-ribbon domain 23 70 1.2E-13 T 22-04-2016 IPR024442 Transposase, zinc-ribbon NHAM_RS01040 ae5ddc68f909aac05ed1f912083448bc 320 SMART SM01126 138 285 2.1E-54 T 22-04-2016 IPR024445 ISXO2-like transposase domain NHAM_RS00410 adf234f1f305eaed6fd45cf664461e6c 224 SUPERFAMILY SSF88697 16 207 4.72E-45 T 22-04-2016 IPR015947 PUA-like domain NHAM_RS00410 adf234f1f305eaed6fd45cf664461e6c 224 SMART SM00464 16 210 1.4E-10 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 NHAM_RS00410 adf234f1f305eaed6fd45cf664461e6c 224 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 16 206 3.3E-24 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 NHAM_RS00410 adf234f1f305eaed6fd45cf664461e6c 224 PANTHER PTHR10046:SF43 1 212 7.9E-44 T 22-04-2016 NHAM_RS00410 adf234f1f305eaed6fd45cf664461e6c 224 PANTHER PTHR10046 1 212 7.9E-44 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 NHAM_RS04315 cc47f74909c7c8e5f635ff09be415476 644 PANTHER PTHR35861 204 215 2.9E-94 T 22-04-2016 NHAM_RS04315 cc47f74909c7c8e5f635ff09be415476 644 PANTHER PTHR35861 161 184 2.9E-94 T 22-04-2016 NHAM_RS04315 cc47f74909c7c8e5f635ff09be415476 644 PANTHER PTHR35861 231 643 2.9E-94 T 22-04-2016 NHAM_RS04315 cc47f74909c7c8e5f635ff09be415476 644 PANTHER PTHR35861 3 144 2.9E-94 T 22-04-2016 NHAM_RS04315 cc47f74909c7c8e5f635ff09be415476 644 Pfam PF04984 Phage tail sheath protein 5 637 5.5E-47 T 22-04-2016 IPR007067 Tail sheath protein NHAM_RS04315 cc47f74909c7c8e5f635ff09be415476 644 PANTHER PTHR35861:SF1 204 215 2.9E-94 T 22-04-2016 NHAM_RS04315 cc47f74909c7c8e5f635ff09be415476 644 PANTHER PTHR35861:SF1 161 184 2.9E-94 T 22-04-2016 NHAM_RS04315 cc47f74909c7c8e5f635ff09be415476 644 PANTHER PTHR35861:SF1 231 643 2.9E-94 T 22-04-2016 NHAM_RS04315 cc47f74909c7c8e5f635ff09be415476 644 PANTHER PTHR35861:SF1 3 144 2.9E-94 T 22-04-2016 NHAM_RS04315 cc47f74909c7c8e5f635ff09be415476 644 Gene3D G3DSA:1.20.1410.10 98 168 2.7E-4 T 22-04-2016 IPR002558 I/LWEQ domain GO:0003779 NHAM_RS15040 3beb6b5fec6d2f39250dc02ffe2046f2 404 Gene3D G3DSA:3.40.50.2300 23 141 2.3E-4 T 22-04-2016 NHAM_RS15040 3beb6b5fec6d2f39250dc02ffe2046f2 404 Pfam PF00563 EAL domain 154 384 6.7E-48 T 22-04-2016 IPR001633 EAL domain NHAM_RS15040 3beb6b5fec6d2f39250dc02ffe2046f2 404 SUPERFAMILY SSF52172 22 143 1.42E-7 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS15040 3beb6b5fec6d2f39250dc02ffe2046f2 404 SMART SM00052 150 389 2.9E-43 T 22-04-2016 IPR001633 EAL domain NHAM_RS15040 3beb6b5fec6d2f39250dc02ffe2046f2 404 PANTHER PTHR33121 152 396 9.3E-60 T 22-04-2016 NHAM_RS15040 3beb6b5fec6d2f39250dc02ffe2046f2 404 Gene3D G3DSA:3.20.20.450 154 393 7.1E-54 T 22-04-2016 IPR001633 EAL domain NHAM_RS15040 3beb6b5fec6d2f39250dc02ffe2046f2 404 PANTHER PTHR33121:SF13 152 396 9.3E-60 T 22-04-2016 NHAM_RS15040 3beb6b5fec6d2f39250dc02ffe2046f2 404 SUPERFAMILY SSF141868 154 394 2.62E-53 T 22-04-2016 IPR001633 EAL domain NHAM_RS14120 d538cb64a4a7bf91be8df5e56372a4c6 331 Gene3D G3DSA:1.10.760.10 192 314 1.3E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS14120 d538cb64a4a7bf91be8df5e56372a4c6 331 SUPERFAMILY SSF46626 198 311 1.76E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS14120 d538cb64a4a7bf91be8df5e56372a4c6 331 SUPERFAMILY SSF46626 30 193 2.92E-39 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS14120 d538cb64a4a7bf91be8df5e56372a4c6 331 PIRSF PIRSF000294 11 325 1.6E-55 T 22-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 NHAM_RS14120 d538cb64a4a7bf91be8df5e56372a4c6 331 PANTHER PTHR30600 39 319 7.0E-63 T 22-04-2016 NHAM_RS14120 d538cb64a4a7bf91be8df5e56372a4c6 331 Pfam PF03150 Di-haem cytochrome c peroxidase 53 200 6.7E-35 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 NHAM_RS14120 d538cb64a4a7bf91be8df5e56372a4c6 331 Gene3D G3DSA:1.10.760.10 42 191 1.3E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS14120 d538cb64a4a7bf91be8df5e56372a4c6 331 PANTHER PTHR30600:SF7 39 319 7.0E-63 T 22-04-2016 NHAM_RS20160 a9091dd8c1602f7f7ee5f665bbb97963 147 SUPERFAMILY SSF50346 14 145 4.91E-28 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS20160 a9091dd8c1602f7f7ee5f665bbb97963 147 Pfam PF05239 PRC-barrel domain 45 103 6.4E-11 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS20160 a9091dd8c1602f7f7ee5f665bbb97963 147 PANTHER PTHR36505 30 145 1.2E-31 T 22-04-2016 NHAM_RS20160 a9091dd8c1602f7f7ee5f665bbb97963 147 Gene3D G3DSA:2.30.30.240 44 98 1.0E-12 T 22-04-2016 NHAM_RS20160 a9091dd8c1602f7f7ee5f665bbb97963 147 PANTHER PTHR36505:SF1 30 145 1.2E-31 T 22-04-2016 NHAM_RS08660 ca5432791af2852c48d37202953482a0 238 PANTHER PTHR21499 3 236 5.9E-97 T 22-04-2016 NHAM_RS08660 ca5432791af2852c48d37202953482a0 238 PANTHER PTHR21499:SF23 3 236 5.9E-97 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 NHAM_RS08660 ca5432791af2852c48d37202953482a0 238 PIRSF PIRSF005650 1 238 4.6E-87 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 NHAM_RS08660 ca5432791af2852c48d37202953482a0 238 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 236 3.3E-87 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 NHAM_RS08660 ca5432791af2852c48d37202953482a0 238 Pfam PF00696 Amino acid kinase family 8 216 4.7E-34 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS08660 ca5432791af2852c48d37202953482a0 238 SUPERFAMILY SSF53633 5 236 4.58E-66 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS08660 ca5432791af2852c48d37202953482a0 238 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 39.984 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 NHAM_RS08660 ca5432791af2852c48d37202953482a0 238 Gene3D G3DSA:3.40.1160.10 2 236 6.6E-79 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 NHAM_RS13295 1c1e8188880ad2479478d930c2ae389a 376 PANTHER PTHR10859:SF37 1 307 2.3E-71 T 22-04-2016 NHAM_RS13295 1c1e8188880ad2479478d930c2ae389a 376 Gene3D G3DSA:3.90.550.10 20 187 3.5E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS13295 1c1e8188880ad2479478d930c2ae389a 376 Pfam PF04138 GtrA-like protein 257 373 7.6E-18 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 NHAM_RS13295 1c1e8188880ad2479478d930c2ae389a 376 PANTHER PTHR10859 1 307 2.3E-71 T 22-04-2016 NHAM_RS13295 1c1e8188880ad2479478d930c2ae389a 376 Pfam PF00535 Glycosyl transferase family 2 21 186 4.6E-33 T 22-04-2016 IPR001173 Glycosyltransferase 2-like NHAM_RS13295 1c1e8188880ad2479478d930c2ae389a 376 SUPERFAMILY SSF53448 11 231 1.41E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS09195 d38ec0128ce2496b14f704b8adf957e6 133 PANTHER PTHR33909:SF1 1 125 1.4E-31 T 22-04-2016 NHAM_RS09195 d38ec0128ce2496b14f704b8adf957e6 133 SMART SM01323 18 101 3.0E-37 T 22-04-2016 IPR003849 Preprotein translocase YajC NHAM_RS09195 d38ec0128ce2496b14f704b8adf957e6 133 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 7.9E-17 T 22-04-2016 IPR003849 Preprotein translocase YajC NHAM_RS09195 d38ec0128ce2496b14f704b8adf957e6 133 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 7.9E-17 T 22-04-2016 IPR003849 Preprotein translocase YajC NHAM_RS09195 d38ec0128ce2496b14f704b8adf957e6 133 Pfam PF02699 Preprotein translocase subunit 21 98 7.3E-27 T 22-04-2016 IPR003849 Preprotein translocase YajC NHAM_RS09195 d38ec0128ce2496b14f704b8adf957e6 133 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 99 3.4E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC NHAM_RS09195 d38ec0128ce2496b14f704b8adf957e6 133 PANTHER PTHR33909 1 125 1.4E-31 T 22-04-2016 NHAM_RS13860 e993d42494c901098c89f026693f5e48 296 PANTHER PTHR32308:SF0 4 288 4.3E-74 T 22-04-2016 NHAM_RS13860 e993d42494c901098c89f026693f5e48 296 PANTHER PTHR32308 4 288 4.3E-74 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like NHAM_RS13860 e993d42494c901098c89f026693f5e48 296 Gene3D G3DSA:3.20.20.60 3 244 1.5E-61 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS13860 e993d42494c901098c89f026693f5e48 296 PIRSF PIRSF015582 1 293 6.7E-67 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like NHAM_RS13860 e993d42494c901098c89f026693f5e48 296 SUPERFAMILY SSF51621 2 244 4.13E-56 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS13860 e993d42494c901098c89f026693f5e48 296 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 4 232 1.8E-32 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 NHAM_RS15600 320233919813cc19c33db49e59c88900 419 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 316 413 6.0E-19 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NHAM_RS15600 320233919813cc19c33db49e59c88900 419 SUPERFAMILY SSF48179 206 297 3.4E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS15600 320233919813cc19c33db49e59c88900 419 PANTHER PTHR11374 3 413 5.2E-153 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NHAM_RS15600 320233919813cc19c33db49e59c88900 419 SMART SM00984 316 414 1.0E-18 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NHAM_RS15600 320233919813cc19c33db49e59c88900 419 Gene3D G3DSA:3.40.50.720 237 414 3.6E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15600 320233919813cc19c33db49e59c88900 419 Gene3D G3DSA:3.40.50.720 3 227 9.2E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15600 320233919813cc19c33db49e59c88900 419 SUPERFAMILY SSF52413 306 413 7.59E-22 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 NHAM_RS15600 320233919813cc19c33db49e59c88900 419 SUPERFAMILY SSF51735 5 198 1.14E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15600 320233919813cc19c33db49e59c88900 419 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 1.4E-25 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 NHAM_RS15600 320233919813cc19c33db49e59c88900 419 PIRSF PIRSF000124 5 419 1.3E-70 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NHAM_RS15600 320233919813cc19c33db49e59c88900 419 PANTHER PTHR11374:SF4 3 413 5.2E-153 T 22-04-2016 NHAM_RS15600 320233919813cc19c33db49e59c88900 419 PIRSF PIRSF500136 1 419 1.9E-138 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 NHAM_RS15600 320233919813cc19c33db49e59c88900 419 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 409 9.9E-116 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 NHAM_RS15600 320233919813cc19c33db49e59c88900 419 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 186 2.5E-51 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 NHAM_RS10525 34ce9f8ce3e830ea3c23521a81dc430b 247 PANTHER PTHR24220:SF490 9 247 5.4E-184 T 22-04-2016 NHAM_RS10525 34ce9f8ce3e830ea3c23521a81dc430b 247 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS10525 34ce9f8ce3e830ea3c23521a81dc430b 247 SMART SM00382 32 219 9.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS10525 34ce9f8ce3e830ea3c23521a81dc430b 247 Gene3D G3DSA:3.40.50.300 7 243 6.6E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10525 34ce9f8ce3e830ea3c23521a81dc430b 247 PIRSF PIRSF039085 4 247 5.8E-108 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 NHAM_RS10525 34ce9f8ce3e830ea3c23521a81dc430b 247 Pfam PF00005 ABC transporter 23 171 5.2E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS10525 34ce9f8ce3e830ea3c23521a81dc430b 247 SUPERFAMILY SSF52540 7 241 1.98E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10525 34ce9f8ce3e830ea3c23521a81dc430b 247 PANTHER PTHR24220 9 247 5.4E-184 T 22-04-2016 NHAM_RS06650 9d0e8189273d6513bb2eb1d5dcb4881f 470 Pfam PF01050 Mannose-6-phosphate isomerase 316 465 2.7E-65 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 NHAM_RS06650 9d0e8189273d6513bb2eb1d5dcb4881f 470 Gene3D G3DSA:3.90.550.10 4 271 1.7E-85 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS06650 9d0e8189273d6513bb2eb1d5dcb4881f 470 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 5 469 3.8E-187 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 NHAM_RS06650 9d0e8189273d6513bb2eb1d5dcb4881f 470 SUPERFAMILY SSF51182 189 469 1.14E-74 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS06650 9d0e8189273d6513bb2eb1d5dcb4881f 470 PANTHER PTHR12526 155 289 6.3E-102 T 22-04-2016 NHAM_RS06650 9d0e8189273d6513bb2eb1d5dcb4881f 470 PANTHER PTHR12526 352 469 6.3E-102 T 22-04-2016 NHAM_RS06650 9d0e8189273d6513bb2eb1d5dcb4881f 470 Gene3D G3DSA:2.60.120.10 358 469 4.8E-44 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS06650 9d0e8189273d6513bb2eb1d5dcb4881f 470 PANTHER PTHR12526:SF387 155 289 6.3E-102 T 22-04-2016 NHAM_RS06650 9d0e8189273d6513bb2eb1d5dcb4881f 470 SUPERFAMILY SSF53448 5 281 1.64E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS06650 9d0e8189273d6513bb2eb1d5dcb4881f 470 PANTHER PTHR12526:SF387 352 469 6.3E-102 T 22-04-2016 NHAM_RS06650 9d0e8189273d6513bb2eb1d5dcb4881f 470 Pfam PF00483 Nucleotidyl transferase 7 286 7.4E-55 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NHAM_RS00110 8966b3a68265f5d5e9811c94e5e7ce1f 169 SUPERFAMILY SSF55486 16 162 2.69E-43 T 22-04-2016 NHAM_RS00110 8966b3a68265f5d5e9811c94e5e7ce1f 169 PANTHER PTHR22881 12 166 3.5E-50 T 22-04-2016 NHAM_RS00110 8966b3a68265f5d5e9811c94e5e7ce1f 169 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 47 157 1.8E-35 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 NHAM_RS00110 8966b3a68265f5d5e9811c94e5e7ce1f 169 Gene3D G3DSA:3.40.390.30 22 166 4.4E-46 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 NHAM_RS00110 8966b3a68265f5d5e9811c94e5e7ce1f 169 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 8 160 22.983 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 NHAM_RS00110 8966b3a68265f5d5e9811c94e5e7ce1f 169 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 126 136 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site NHAM_RS00110 8966b3a68265f5d5e9811c94e5e7ce1f 169 Pfam PF02130 Uncharacterized protein family UPF0054 23 156 7.5E-37 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 365 388 - T 22-04-2016 IPR020595 MnmG-related, conserved site NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 Pfam PF01134 Glucose inhibited division protein A 6 393 4.5E-161 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 613 8.8E-235 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 SUPERFAMILY SSF51905 4 64 1.6E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 SUPERFAMILY SSF51905 95 258 1.6E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 2.6E-6 T 22-04-2016 NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.6E-6 T 22-04-2016 NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 Gene3D G3DSA:3.50.50.60 4 171 1.6E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 616 40.37 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 PANTHER PTHR11806 1 620 0.0 T 22-04-2016 NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 22-04-2016 IPR020595 MnmG-related, conserved site NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 SMART SM01228 539 609 3.3E-34 T 22-04-2016 NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 PANTHER PTHR11806:SF0 1 620 0.0 T 22-04-2016 NHAM_RS00525 851f2a57a6b693c3e9c45d9c8bf43425 624 Pfam PF13932 GidA associated domain 399 607 1.2E-58 T 22-04-2016 IPR026904 GidA associated domain 3 NHAM_RS07670 5349c209074bc5f610b7713115423a84 384 PANTHER PTHR11751:SF301 4 381 5.5E-141 T 22-04-2016 NHAM_RS07670 5349c209074bc5f610b7713115423a84 384 Gene3D G3DSA:3.90.1150.10 267 381 6.6E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS07670 5349c209074bc5f610b7713115423a84 384 Pfam PF00155 Aminotransferase class I and II 24 377 1.5E-65 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NHAM_RS07670 5349c209074bc5f610b7713115423a84 384 SUPERFAMILY SSF53383 2 380 4.39E-103 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS07670 5349c209074bc5f610b7713115423a84 384 PANTHER PTHR11751 4 381 5.5E-141 T 22-04-2016 NHAM_RS07670 5349c209074bc5f610b7713115423a84 384 Gene3D G3DSA:3.40.640.10 38 266 1.3E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 Pfam PF00633 Helix-hairpin-helix motif 122 150 8.4E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 SMART SM00478 61 232 2.2E-44 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 Gene3D G3DSA:1.10.1670.10 145 266 2.5E-36 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 Gene3D G3DSA:3.90.79.10 275 388 8.9E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 PANTHER PTHR10359 29 173 1.0E-91 T 22-04-2016 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 PANTHER PTHR10359 198 392 1.0E-91 T 22-04-2016 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 SMART SM00525 233 253 1.1E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 SUPERFAMILY SSF55811 262 388 7.16E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 Gene3D G3DSA:1.10.340.30 50 144 1.1E-40 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 58 181 2.5E-17 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 234 250 1.0E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 SUPERFAMILY SSF48150 28 264 4.57E-68 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 ProSitePatterns PS01155 Endonuclease III family signature. 124 153 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 Pfam PF14815 NUDIX domain 277 387 7.7E-24 T 22-04-2016 IPR029119 MutY, C-terminal NHAM_RS16535 2c1566d927a165880dbbc9188dfbfb20 392 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 234 250 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site NHAM_RS10950 9b03a29848a9753dc36dc3f17b3e1f3f 417 Pfam PF05065 Phage capsid family 146 297 2.2E-8 T 22-04-2016 IPR024455 Phage capsid NHAM_RS10950 9b03a29848a9753dc36dc3f17b3e1f3f 417 SUPERFAMILY SSF56563 142 293 3.79E-11 T 22-04-2016 NHAM_RS10950 9b03a29848a9753dc36dc3f17b3e1f3f 417 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 23 291 1.8E-12 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 NHAM_RS09185 eb2d0e451d80feb1a7770c74ed773c25 396 PANTHER PTHR33567:SF3 2 390 1.2E-136 T 22-04-2016 NHAM_RS09185 eb2d0e451d80feb1a7770c74ed773c25 396 PANTHER PTHR33567 2 390 1.2E-136 T 22-04-2016 NHAM_RS09185 eb2d0e451d80feb1a7770c74ed773c25 396 PIRSF PIRSF004810 1 396 6.6E-126 T 22-04-2016 IPR014047 Chromate transporter, long chain NHAM_RS09185 eb2d0e451d80feb1a7770c74ed773c25 396 TIGRFAM TIGR00937 2A51: chromate efflux transporter 17 390 3.8E-101 T 22-04-2016 IPR014047 Chromate transporter, long chain NHAM_RS09185 eb2d0e451d80feb1a7770c74ed773c25 396 Pfam PF02417 Chromate transporter 12 176 9.0E-34 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 NHAM_RS09185 eb2d0e451d80feb1a7770c74ed773c25 396 Pfam PF02417 Chromate transporter 228 390 1.9E-39 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 NHAM_RS12745 2fd52f282ff695a01103e3cc8d63aafe 216 SUPERFAMILY SSF55166 99 194 3.22E-8 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 PANTHER PTHR24960:SF43 59 329 1.5E-152 T 22-04-2016 NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 PANTHER PTHR24960:SF43 497 631 1.5E-152 T 22-04-2016 NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 Gene3D G3DSA:3.30.70.20 246 300 2.7E-13 T 22-04-2016 NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 536 547 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 505 516 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 294 305 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 Gene3D G3DSA:3.30.70.20 545 581 5.0E-4 T 22-04-2016 NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 SUPERFAMILY SSF54862 241 315 1.77E-43 T 22-04-2016 NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 SUPERFAMILY SSF54862 500 603 1.77E-43 T 22-04-2016 NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 Gene3D G3DSA:1.10.1060.10 376 377 8.9E-11 T 22-04-2016 NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 Gene3D G3DSA:1.10.1060.10 301 330 8.9E-11 T 22-04-2016 NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 Gene3D G3DSA:3.30.70.20 496 544 4.2E-14 T 22-04-2016 NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 PANTHER PTHR24960 59 329 1.5E-152 T 22-04-2016 NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 PANTHER PTHR24960 497 631 1.5E-152 T 22-04-2016 NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 Pfam PF12838 4Fe-4S dicluster domain 266 308 2.0E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NHAM_RS15995 3ab1ec28849d7f7a9d3f58b0ec9f6b0e 658 Pfam PF13187 4Fe-4S dicluster domain 505 551 6.7E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NHAM_RS07645 18e30c5b120df0cba4900a77addf4af7 257 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 213 3.3E-21 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NHAM_RS07645 18e30c5b120df0cba4900a77addf4af7 257 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 183 200 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site NHAM_RS07645 18e30c5b120df0cba4900a77addf4af7 257 PANTHER PTHR30433 2 255 1.1E-112 T 22-04-2016 NHAM_RS07645 18e30c5b120df0cba4900a77addf4af7 257 PANTHER PTHR30433:SF2 2 255 1.1E-112 T 22-04-2016 IPR022522 Flagellar motor stator, MotA NHAM_RS01220 75b1260ef3e5f9a73f00633e2a11079f 231 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 16 210 3.2E-68 T 22-04-2016 IPR026336 Metallophosphoesterase, DNA ligase-associated NHAM_RS01220 75b1260ef3e5f9a73f00633e2a11079f 231 PIRSF PIRSF000887 15 228 6.5E-48 T 22-04-2016 IPR024173 Phosphoesterase, MJ0037 NHAM_RS01220 75b1260ef3e5f9a73f00633e2a11079f 231 Pfam PF00149 Calcineurin-like phosphoesterase 36 137 1.4E-5 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NHAM_RS01220 75b1260ef3e5f9a73f00633e2a11079f 231 PANTHER PTHR39323:SF1 14 231 6.3E-50 T 22-04-2016 NHAM_RS01220 75b1260ef3e5f9a73f00633e2a11079f 231 PANTHER PTHR39323 14 231 6.3E-50 T 22-04-2016 NHAM_RS01220 75b1260ef3e5f9a73f00633e2a11079f 231 SUPERFAMILY SSF56300 36 126 4.4E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS01220 75b1260ef3e5f9a73f00633e2a11079f 231 Gene3D G3DSA:3.60.21.10 36 128 5.6E-11 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 PANTHER PTHR30386:SF8 141 437 1.7E-61 T 22-04-2016 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 Pfam PF13533 Biotin-lipoyl like 61 103 1.7E-5 T 22-04-2016 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 Pfam PF13437 HlyD family secretion protein 283 389 1.3E-12 T 22-04-2016 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 19 437 1.8E-100 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 PANTHER PTHR30386 4 114 1.7E-61 T 22-04-2016 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 PANTHER PTHR30386 141 437 1.7E-61 T 22-04-2016 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 PANTHER PTHR30386:SF8 4 114 1.7E-61 T 22-04-2016 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 402 417 2.9E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 294 315 2.9E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 417 437 2.9E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 327 351 2.9E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 71 91 2.9E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 29 52 2.9E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 SUPERFAMILY SSF111369 60 133 6.02E-5 T 22-04-2016 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 Gene3D G3DSA:2.40.50.100 61 93 3.6E-12 T 22-04-2016 NHAM_RS15625 f6783281a1cdfead3fe146c69825b3e1 438 Gene3D G3DSA:2.40.50.100 279 314 3.6E-12 T 22-04-2016 NHAM_RS03465 d1b428f1ede4cebab0fb1ea28db7f8e5 284 Pfam PF13717 zinc-ribbon domain 1 36 9.2E-12 T 22-04-2016 NHAM_RS03465 d1b428f1ede4cebab0fb1ea28db7f8e5 284 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 1 37 5.1E-16 T 22-04-2016 IPR011723 Zinc finger/thioredoxin putative NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 Gene3D G3DSA:3.40.800.10 12 313 1.5E-77 T 22-04-2016 IPR023696 Ureohydrolase domain NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 Pfam PF00491 Arginase family 11 306 1.8E-68 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 PIRSF PIRSF036979 8 312 1.0E-32 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 PANTHER PTHR11358 11 325 2.3E-102 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 ProSitePatterns PS01053 Arginase family signature. 236 257 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 PRINTS PR00116 Arginase signature 103 118 7.5E-43 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 PRINTS PR00116 Arginase signature 184 202 7.5E-43 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 PRINTS PR00116 Arginase signature 268 282 7.5E-43 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 PRINTS PR00116 Arginase signature 233 262 7.5E-43 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 PRINTS PR00116 Arginase signature 130 157 7.5E-43 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 PANTHER PTHR11358:SF2 11 325 2.3E-102 T 22-04-2016 NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 SUPERFAMILY SSF52768 11 309 7.74E-80 T 22-04-2016 NHAM_RS02325 5a5cb07b3959933310fe5453b8ab06cc 325 TIGRFAM TIGR01229 rocF_arginase: arginase 14 309 7.5E-79 T 22-04-2016 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: REACT_13|UniPathway: UPA00158 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 Pfam PF01442 Apolipoprotein A1/A4/E domain 896 1085 0.003 T 22-04-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 Pfam PF01442 Apolipoprotein A1/A4/E domain 225 394 3.2E-4 T 22-04-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 Pfam PF01442 Apolipoprotein A1/A4/E domain 458 635 1.2E-12 T 22-04-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 Pfam PF01442 Apolipoprotein A1/A4/E domain 1100 1211 0.3 T 22-04-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 Pfam PF01442 Apolipoprotein A1/A4/E domain 973 1152 0.0043 T 22-04-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 Pfam PF01442 Apolipoprotein A1/A4/E domain 621 763 4.8E-7 T 22-04-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 Pfam PF01442 Apolipoprotein A1/A4/E domain 380 503 7.1E-6 T 22-04-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 Pfam PF01442 Apolipoprotein A1/A4/E domain 1228 1424 6.5E-17 T 22-04-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 Pfam PF01442 Apolipoprotein A1/A4/E domain 285 449 1.2E-7 T 22-04-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 Pfam PF01442 Apolipoprotein A1/A4/E domain 818 999 0.071 T 22-04-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 Gene3D G3DSA:1.20.120.20 505 634 1.3E-5 T 22-04-2016 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 SUPERFAMILY SSF58113 461 635 5.49E-9 T 22-04-2016 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 PANTHER PTHR18976 3 1042 2.5E-263 T 22-04-2016 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 PANTHER PTHR18976 1087 1848 2.5E-263 T 22-04-2016 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 PANTHER PTHR18976:SF17 3 1042 2.5E-263 T 22-04-2016 NHAM_RS06725 4cf792d9705e739dd5324b9a95a71e07 1850 PANTHER PTHR18976:SF17 1087 1848 2.5E-263 T 22-04-2016 NHAM_RS18180 4f247924dc1909e41b8d7f1f992e6b55 153 SUPERFAMILY SSF55729 8 147 4.71E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS18180 4f247924dc1909e41b8d7f1f992e6b55 153 PANTHER PTHR23091:SF266 8 149 2.1E-48 T 22-04-2016 NHAM_RS18180 4f247924dc1909e41b8d7f1f992e6b55 153 PANTHER PTHR23091 8 149 2.1E-48 T 22-04-2016 NHAM_RS18180 4f247924dc1909e41b8d7f1f992e6b55 153 Gene3D G3DSA:3.40.630.30 7 150 1.5E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS18180 4f247924dc1909e41b8d7f1f992e6b55 153 Pfam PF13673 Acetyltransferase (GNAT) domain 48 151 9.1E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS00330 f841e76b8b8cd88183a8bd53c238daed 325 Pfam PF01343 Peptidase family S49 107 257 3.7E-39 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 NHAM_RS00330 f841e76b8b8cd88183a8bd53c238daed 325 Gene3D G3DSA:3.90.226.10 184 258 3.3E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS00330 f841e76b8b8cd88183a8bd53c238daed 325 Gene3D G3DSA:3.90.226.10 78 146 3.3E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS00330 f841e76b8b8cd88183a8bd53c238daed 325 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 53 253 6.2E-56 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 NHAM_RS00330 f841e76b8b8cd88183a8bd53c238daed 325 PANTHER PTHR33209 1 21 1.0E-62 T 22-04-2016 NHAM_RS00330 f841e76b8b8cd88183a8bd53c238daed 325 PANTHER PTHR33209 49 279 1.0E-62 T 22-04-2016 NHAM_RS00330 f841e76b8b8cd88183a8bd53c238daed 325 SUPERFAMILY SSF52096 33 154 1.45E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS00330 f841e76b8b8cd88183a8bd53c238daed 325 SUPERFAMILY SSF52096 183 244 1.45E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS00790 ac0580cafd46e91f227a074a0427a303 271 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 127 9.6E-31 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS00790 ac0580cafd46e91f227a074a0427a303 271 Gene3D G3DSA:3.40.50.720 3 165 4.0E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00790 ac0580cafd46e91f227a074a0427a303 271 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 130 266 1.0E-42 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS00790 ac0580cafd46e91f227a074a0427a303 271 SUPERFAMILY SSF55347 129 238 1.26E-33 T 22-04-2016 NHAM_RS00790 ac0580cafd46e91f227a074a0427a303 271 PANTHER PTHR20836:SF0 4 271 7.4E-85 T 22-04-2016 NHAM_RS00790 ac0580cafd46e91f227a074a0427a303 271 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 267 31.007 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS00790 ac0580cafd46e91f227a074a0427a303 271 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 152 169 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS00790 ac0580cafd46e91f227a074a0427a303 271 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 267 2.0E-75 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS00790 ac0580cafd46e91f227a074a0427a303 271 PANTHER PTHR20836 4 271 7.4E-85 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS00790 ac0580cafd46e91f227a074a0427a303 271 PIRSF PIRSF000161 2 270 2.6E-74 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS00790 ac0580cafd46e91f227a074a0427a303 271 SUPERFAMILY SSF51735 4 128 3.28E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00790 ac0580cafd46e91f227a074a0427a303 271 SUPERFAMILY SSF51735 238 269 3.28E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00455 114bbc41857c4809661db974b61fa639 339 PANTHER PTHR35869 134 330 3.8E-50 T 22-04-2016 NHAM_RS00455 114bbc41857c4809661db974b61fa639 339 SUPERFAMILY SSF89392 164 330 4.32E-30 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX NHAM_RS00455 114bbc41857c4809661db974b61fa639 339 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 174 330 4.8E-41 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like NHAM_RS00455 114bbc41857c4809661db974b61fa639 339 Gene3D G3DSA:2.50.20.10 164 330 2.1E-26 T 22-04-2016 NHAM_RS18350 f1fa9705bd917c6bcd80f4de227ae88c 235 Pfam PF04402 Protein of unknown function (DUF541) 32 229 1.7E-53 T 22-04-2016 IPR007497 Protein of unknown function DUF541 NHAM_RS18350 f1fa9705bd917c6bcd80f4de227ae88c 235 PANTHER PTHR34387:SF1 1 234 7.3E-57 T 22-04-2016 NHAM_RS18350 f1fa9705bd917c6bcd80f4de227ae88c 235 PANTHER PTHR34387 1 234 7.3E-57 T 22-04-2016 NHAM_RS07860 84de013711d1d115f4fb17c695219ba4 668 Pfam PF00005 ABC transporter 437 586 2.1E-38 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS07860 84de013711d1d115f4fb17c695219ba4 668 PANTHER PTHR24221:SF266 43 665 8.2E-256 T 22-04-2016 NHAM_RS07860 84de013711d1d115f4fb17c695219ba4 668 SUPERFAMILY SSF90123 92 406 7.06E-61 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS07860 84de013711d1d115f4fb17c695219ba4 668 Gene3D G3DSA:3.40.50.300 420 651 6.6E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07860 84de013711d1d115f4fb17c695219ba4 668 Pfam PF00664 ABC transporter transmembrane region 104 366 1.2E-35 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS07860 84de013711d1d115f4fb17c695219ba4 668 PANTHER PTHR24221 43 665 8.2E-256 T 22-04-2016 NHAM_RS07860 84de013711d1d115f4fb17c695219ba4 668 SMART SM00382 446 632 2.6E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS07860 84de013711d1d115f4fb17c695219ba4 668 SUPERFAMILY SSF52540 411 656 1.71E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07860 84de013711d1d115f4fb17c695219ba4 668 Gene3D G3DSA:1.20.1560.10 92 411 7.1E-62 T 22-04-2016 NHAM_RS07860 84de013711d1d115f4fb17c695219ba4 668 ProSitePatterns PS00211 ABC transporters family signature. 558 572 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS09235 0feb5f178c047911b74c714f87f35e15 124 SUPERFAMILY SSF158634 1 124 1.24E-45 T 22-04-2016 NHAM_RS09235 0feb5f178c047911b74c714f87f35e15 124 Pfam PF12200 Domain of unknown function (DUF3597) 3 119 2.6E-44 T 22-04-2016 IPR022016 Domain of unknown function DUF3597 NHAM_RS09485 164affc4bdfa9ff52c19b0ef643e7542 103 SUPERFAMILY SSF46785 14 94 6.97E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS09485 164affc4bdfa9ff52c19b0ef643e7542 103 Gene3D G3DSA:1.10.10.10 14 93 7.8E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS05140 b9723f3c95c04676ae924977e13bfebf 162 PIRSF PIRSF019239 1 162 3.3E-38 T 22-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 NHAM_RS05140 b9723f3c95c04676ae924977e13bfebf 162 Pfam PF01899 Na+/H+ ion antiporter subunit 13 160 1.2E-42 T 22-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 NHAM_RS05140 b9723f3c95c04676ae924977e13bfebf 162 PANTHER PTHR34584 1 161 4.1E-28 T 22-04-2016 NHAM_RS12130 ce063c8f43d295e12eed4c0661670e50 171 Pfam PF04985 Phage tail tube protein FII 11 169 3.6E-41 T 22-04-2016 IPR006498 Tail tube protein NHAM_RS12130 ce063c8f43d295e12eed4c0661670e50 171 PANTHER PTHR35861:SF2 12 149 2.7E-19 T 22-04-2016 NHAM_RS12130 ce063c8f43d295e12eed4c0661670e50 171 PANTHER PTHR35861 12 149 2.7E-19 T 22-04-2016 NHAM_RS12130 ce063c8f43d295e12eed4c0661670e50 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 8 153 1.1E-30 T 22-04-2016 IPR006498 Tail tube protein NHAM_RS08785 947b88056d8840fbfad3c8c7d99e7e0b 176 Pfam PF04586 Caudovirus prohead serine protease 10 156 9.1E-40 T 22-04-2016 IPR006433 Prohead protease NHAM_RS08785 947b88056d8840fbfad3c8c7d99e7e0b 176 Gene3D G3DSA:3.20.16.10 22 87 1.1E-4 T 22-04-2016 NHAM_RS08785 947b88056d8840fbfad3c8c7d99e7e0b 176 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 20 156 1.3E-38 T 22-04-2016 IPR006433 Prohead protease NHAM_RS08785 947b88056d8840fbfad3c8c7d99e7e0b 176 SUPERFAMILY SSF50789 21 170 1.7E-8 T 22-04-2016 NHAM_RS02725 d5615330547ee2a7b39c5cd4fc3fef4f 456 PANTHER PTHR21666 55 449 3.2E-141 T 22-04-2016 NHAM_RS02725 d5615330547ee2a7b39c5cd4fc3fef4f 456 PANTHER PTHR21666:SF204 55 449 3.2E-141 T 22-04-2016 NHAM_RS02725 d5615330547ee2a7b39c5cd4fc3fef4f 456 SUPERFAMILY SSF51261 308 445 1.88E-26 T 22-04-2016 IPR011055 Duplicated hybrid motif NHAM_RS02725 d5615330547ee2a7b39c5cd4fc3fef4f 456 Pfam PF01551 Peptidase family M23 341 442 1.0E-22 T 22-04-2016 IPR016047 Peptidase M23 NHAM_RS02725 d5615330547ee2a7b39c5cd4fc3fef4f 456 Gene3D G3DSA:2.70.70.10 301 447 1.6E-29 T 22-04-2016 NHAM_RS12515 93e1e6828e22aadbb61be0db58a90cda 163 Pfam PF01980 Uncharacterised protein family UPF0066 39 145 1.0E-26 T 22-04-2016 IPR023370 TsaA-like domain NHAM_RS12515 93e1e6828e22aadbb61be0db58a90cda 163 SUPERFAMILY SSF118196 24 154 9.68E-41 T 22-04-2016 IPR023370 TsaA-like domain NHAM_RS12515 93e1e6828e22aadbb61be0db58a90cda 163 Gene3D G3DSA:2.40.30.70 26 155 1.3E-38 T 22-04-2016 IPR023370 TsaA-like domain NHAM_RS12515 93e1e6828e22aadbb61be0db58a90cda 163 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 26 144 4.0E-29 T 22-04-2016 IPR023370 TsaA-like domain NHAM_RS12515 93e1e6828e22aadbb61be0db58a90cda 163 PANTHER PTHR12818 1 144 1.4E-35 T 22-04-2016 NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 19 554 1.9E-275 T 22-04-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 Pfam PF16657 Maltogenic Amylase, C-terminal domain 474 551 1.1E-28 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 Gene3D G3DSA:2.60.40.1180 474 554 2.2E-17 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 SUPERFAMILY SSF51445 18 337 3.84E-124 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 SUPERFAMILY SSF51445 364 471 3.84E-124 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 SUPERFAMILY SSF56112 841 991 5.1E-15 T 22-04-2016 IPR011009 Protein kinase-like domain NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 SUPERFAMILY SSF56112 726 810 5.1E-15 T 22-04-2016 IPR011009 Protein kinase-like domain NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 SUPERFAMILY SSF56112 1018 1043 5.1E-15 T 22-04-2016 IPR011009 Protein kinase-like domain NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 568 1086 3.7E-160 T 22-04-2016 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 PANTHER PTHR10357:SF164 450 578 1.8E-277 T 22-04-2016 NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 PANTHER PTHR10357:SF164 1 411 1.8E-277 T 22-04-2016 NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 Gene3D G3DSA:3.20.20.80 195 420 6.1E-107 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 Gene3D G3DSA:3.20.20.80 21 118 6.1E-107 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 Gene3D G3DSA:3.20.20.80 453 466 6.1E-107 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 Pfam PF00128 Alpha amylase, catalytic domain 42 395 1.3E-72 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 PANTHER PTHR10357 450 578 1.8E-277 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 PANTHER PTHR10357 1 411 1.8E-277 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 Gene3D G3DSA:3.90.400.10 119 187 2.8E-22 T 22-04-2016 NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 SMART SM00642 27 426 1.4E-99 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NHAM_RS07485 dbf1966806969b32f62755eac07f1a02 1088 SUPERFAMILY SSF51011 474 554 2.88E-17 T 22-04-2016 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 PANTHER PTHR11405:SF1 2 305 6.4E-142 T 22-04-2016 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 6 304 3.7E-113 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 147 1.2E-48 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 8.7E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 8.7E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 283 294 8.7E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 222 232 8.7E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 8.7E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 5 305 78.047 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 Gene3D G3DSA:3.40.50.1370 2 144 4.4E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 Gene3D G3DSA:3.40.50.1370 145 291 2.9E-59 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 SUPERFAMILY SSF53671 3 305 6.68E-106 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 153 302 3.0E-49 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 5.8E-29 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 5.8E-29 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 5.8E-29 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 5.8E-29 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NHAM_RS03335 d2eb542a5e670be75c31999dbf70d58a 308 PANTHER PTHR11405 2 305 6.4E-142 T 22-04-2016 NHAM_RS04035 f39719ea69bbacc13d6493ff209727ba 309 PANTHER PTHR10625:SF104 1 308 1.6E-103 T 22-04-2016 NHAM_RS04035 f39719ea69bbacc13d6493ff209727ba 309 SUPERFAMILY SSF52768 1 308 1.34E-100 T 22-04-2016 NHAM_RS04035 f39719ea69bbacc13d6493ff209727ba 309 Pfam PF00850 Histone deacetylase domain 20 306 2.0E-81 T 22-04-2016 IPR023801 Histone deacetylase domain NHAM_RS04035 f39719ea69bbacc13d6493ff209727ba 309 PANTHER PTHR10625 1 308 1.6E-103 T 22-04-2016 IPR000286 Histone deacetylase superfamily NHAM_RS04035 f39719ea69bbacc13d6493ff209727ba 309 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 8.9E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily NHAM_RS04035 f39719ea69bbacc13d6493ff209727ba 309 PRINTS PR01270 Histone deacetylase superfamily signature 236 246 8.9E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily NHAM_RS04035 f39719ea69bbacc13d6493ff209727ba 309 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 8.9E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily NHAM_RS04035 f39719ea69bbacc13d6493ff209727ba 309 Gene3D G3DSA:3.40.800.20 3 308 5.5E-101 T 22-04-2016 IPR023801 Histone deacetylase domain NHAM_RS04460 bbfcac4a936a5153ff66a634074f3bc8 173 PANTHER PTHR23091 14 156 8.0E-13 T 22-04-2016 NHAM_RS04460 bbfcac4a936a5153ff66a634074f3bc8 173 Pfam PF00583 Acetyltransferase (GNAT) family 86 156 4.9E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS04460 bbfcac4a936a5153ff66a634074f3bc8 173 Gene3D G3DSA:3.40.630.30 13 162 5.3E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS04460 bbfcac4a936a5153ff66a634074f3bc8 173 SUPERFAMILY SSF55729 16 160 1.01E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS05415 40ec9d388c8b9cfcb2a64e35d0e1f336 818 PANTHER PTHR22916:SF26 236 514 6.5E-26 T 22-04-2016 NHAM_RS05415 40ec9d388c8b9cfcb2a64e35d0e1f336 818 PANTHER PTHR22916 236 514 6.5E-26 T 22-04-2016 NHAM_RS05415 40ec9d388c8b9cfcb2a64e35d0e1f336 818 Gene3D G3DSA:3.90.550.10 244 487 1.5E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS05415 40ec9d388c8b9cfcb2a64e35d0e1f336 818 Gene3D G3DSA:1.25.40.10 23 93 2.2E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS05415 40ec9d388c8b9cfcb2a64e35d0e1f336 818 SUPERFAMILY SSF53448 244 470 2.84E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS05415 40ec9d388c8b9cfcb2a64e35d0e1f336 818 Pfam PF13641 Glycosyltransferase like family 2 245 463 3.3E-11 T 22-04-2016 NHAM_RS13500 b9ad5a5694941177529c64454a19d36d 629 PANTHER PTHR23408:SF13 215 607 9.1E-69 T 22-04-2016 NHAM_RS13500 b9ad5a5694941177529c64454a19d36d 629 SUPERFAMILY SSF51703 13 528 4.45E-143 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 NHAM_RS13500 b9ad5a5694941177529c64454a19d36d 629 Gene3D G3DSA:3.20.20.240 45 485 7.3E-109 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 NHAM_RS13500 b9ad5a5694941177529c64454a19d36d 629 Pfam PF01642 Methylmalonyl-CoA mutase 71 533 1.2E-97 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 NHAM_RS13500 b9ad5a5694941177529c64454a19d36d 629 PANTHER PTHR23408 215 607 9.1E-69 T 22-04-2016 NHAM_RS13500 b9ad5a5694941177529c64454a19d36d 629 SUPERFAMILY SSF52242 465 627 3.57E-40 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NHAM_RS13500 b9ad5a5694941177529c64454a19d36d 629 Gene3D G3DSA:3.40.50.280 491 627 2.3E-51 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NHAM_RS13500 b9ad5a5694941177529c64454a19d36d 629 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 355 380 - T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 NHAM_RS09810 7e87b96d934e58c59921597385175689 369 Gene3D G3DSA:3.40.50.10610 197 368 1.0E-45 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component NHAM_RS09810 7e87b96d934e58c59921597385175689 369 PANTHER PTHR36698:SF2 2 310 1.3E-84 T 22-04-2016 NHAM_RS09810 7e87b96d934e58c59921597385175689 369 SUPERFAMILY SSF159594 203 368 2.3E-31 T 22-04-2016 NHAM_RS09810 7e87b96d934e58c59921597385175689 369 Pfam PF02470 MlaD protein 39 115 1.6E-11 T 22-04-2016 IPR003399 Mce/MlaD NHAM_RS09810 7e87b96d934e58c59921597385175689 369 PANTHER PTHR36698 2 310 1.3E-84 T 22-04-2016 NHAM_RS09810 7e87b96d934e58c59921597385175689 369 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 204 361 4.0E-11 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component NHAM_RS18100 1f1b4b5048573a50e038a9da4762948c 273 PANTHER PTHR36303 2 269 2.4E-141 T 22-04-2016 NHAM_RS18100 1f1b4b5048573a50e038a9da4762948c 273 SUPERFAMILY SSF56300 1 259 7.59E-84 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS18100 1f1b4b5048573a50e038a9da4762948c 273 Pfam PF13277 YmdB-like protein 4 257 2.2E-101 T 22-04-2016 IPR005235 Metallophosphoesterase, YmdB-like NHAM_RS18100 1f1b4b5048573a50e038a9da4762948c 273 PIRSF PIRSF004789 1 265 1.2E-89 T 22-04-2016 IPR005235 Metallophosphoesterase, YmdB-like NHAM_RS18100 1f1b4b5048573a50e038a9da4762948c 273 PANTHER PTHR36303:SF1 2 269 2.4E-141 T 22-04-2016 NHAM_RS18100 1f1b4b5048573a50e038a9da4762948c 273 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 259 3.2E-80 T 22-04-2016 IPR005235 Metallophosphoesterase, YmdB-like NHAM_RS18100 1f1b4b5048573a50e038a9da4762948c 273 Gene3D G3DSA:3.60.21.30 1 270 9.1E-111 T 22-04-2016 NHAM_RS24060 0ca705cec7df8818517286f4b7ab91d8 369 Pfam PF13578 Methyltransferase domain 42 142 1.1E-7 T 22-04-2016 NHAM_RS24060 0ca705cec7df8818517286f4b7ab91d8 369 SUPERFAMILY SSF53335 10 173 1.17E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS24060 0ca705cec7df8818517286f4b7ab91d8 369 Gene3D G3DSA:3.40.50.150 37 198 5.5E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS17385 2416946a53206a2a2f28a38a7ae881aa 257 Pfam PF11150 Protein of unknown function (DUF2927) 36 239 2.0E-58 T 22-04-2016 IPR021323 Protein of unknown function DUF2927 NHAM_RS18340 70a1edca72b8c93471b7518e59bc6127 290 SUPERFAMILY SSF54506 9 134 5.1E-35 T 22-04-2016 NHAM_RS18340 70a1edca72b8c93471b7518e59bc6127 290 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 69 83 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS18340 70a1edca72b8c93471b7518e59bc6127 290 Gene3D G3DSA:3.10.310.10 123 271 5.5E-48 T 22-04-2016 NHAM_RS18340 70a1edca72b8c93471b7518e59bc6127 290 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 7 283 31.987 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS18340 70a1edca72b8c93471b7518e59bc6127 290 Gene3D G3DSA:3.10.310.10 7 122 8.1E-37 T 22-04-2016 NHAM_RS18340 70a1edca72b8c93471b7518e59bc6127 290 SUPERFAMILY SSF54506 150 281 8.97E-48 T 22-04-2016 NHAM_RS18340 70a1edca72b8c93471b7518e59bc6127 290 PANTHER PTHR31689 8 287 1.3E-102 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS18340 70a1edca72b8c93471b7518e59bc6127 290 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 8 280 2.3E-64 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS18340 70a1edca72b8c93471b7518e59bc6127 290 Pfam PF01678 Diaminopimelate epimerase 9 127 7.2E-16 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS18340 70a1edca72b8c93471b7518e59bc6127 290 Pfam PF01678 Diaminopimelate epimerase 161 275 3.7E-25 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 NHAM_RS20175 3d17d154fcb4d6b309fb69c67d8ddd81 522 Gene3D G3DSA:1.10.101.10 338 394 1.6E-11 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS20175 3d17d154fcb4d6b309fb69c67d8ddd81 522 PANTHER PTHR30163 277 406 5.8E-32 T 22-04-2016 IPR011757 Lytic transglycosylase MltB NHAM_RS20175 3d17d154fcb4d6b309fb69c67d8ddd81 522 SUPERFAMILY SSF47090 330 394 3.14E-13 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS20175 3d17d154fcb4d6b309fb69c67d8ddd81 522 PANTHER PTHR30163:SF2 277 406 5.8E-32 T 22-04-2016 NHAM_RS20175 3d17d154fcb4d6b309fb69c67d8ddd81 522 Pfam PF06823 Protein of unknown function (DUF1236) 249 311 5.6E-7 T 22-04-2016 IPR009642 Protein of unknown function DUF1236 NHAM_RS20175 3d17d154fcb4d6b309fb69c67d8ddd81 522 Pfam PF01471 Putative peptidoglycan binding domain 338 391 9.0E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS13955 5f884f0d13d8bab75622a09cbac03e95 317 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 16 310 27.186 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 NHAM_RS13955 5f884f0d13d8bab75622a09cbac03e95 317 Pfam PF01715 IPP transferase 49 293 1.7E-68 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 NHAM_RS13955 5f884f0d13d8bab75622a09cbac03e95 317 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 17 295 5.8E-71 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 NHAM_RS13955 5f884f0d13d8bab75622a09cbac03e95 317 SUPERFAMILY SSF52540 17 48 2.74E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13955 5f884f0d13d8bab75622a09cbac03e95 317 SUPERFAMILY SSF52540 145 242 2.74E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13955 5f884f0d13d8bab75622a09cbac03e95 317 SUPERFAMILY SSF52540 17 159 6.45E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13955 5f884f0d13d8bab75622a09cbac03e95 317 Gene3D G3DSA:1.10.287.890 212 293 7.5E-30 T 22-04-2016 NHAM_RS13955 5f884f0d13d8bab75622a09cbac03e95 317 PANTHER PTHR11088 1 297 4.9E-87 T 22-04-2016 NHAM_RS13955 5f884f0d13d8bab75622a09cbac03e95 317 Gene3D G3DSA:3.40.50.300 16 183 3.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14790 b654a9ca24a5e15ade98ae67baef5899 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 2.3E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS14790 b654a9ca24a5e15ade98ae67baef5899 307 SUPERFAMILY SSF53850 99 306 2.53E-41 T 22-04-2016 NHAM_RS14790 b654a9ca24a5e15ade98ae67baef5899 307 SUPERFAMILY SSF46785 6 121 1.61E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS14790 b654a9ca24a5e15ade98ae67baef5899 307 PANTHER PTHR30537:SF5 5 307 2.3E-94 T 22-04-2016 NHAM_RS14790 b654a9ca24a5e15ade98ae67baef5899 307 Gene3D G3DSA:3.40.190.10 101 200 3.7E-26 T 22-04-2016 NHAM_RS14790 b654a9ca24a5e15ade98ae67baef5899 307 Pfam PF03466 LysR substrate binding domain 97 301 7.3E-37 T 22-04-2016 IPR005119 LysR, substrate-binding NHAM_RS14790 b654a9ca24a5e15ade98ae67baef5899 307 PANTHER PTHR30537 5 307 2.3E-94 T 22-04-2016 NHAM_RS14790 b654a9ca24a5e15ade98ae67baef5899 307 Gene3D G3DSA:1.10.10.10 10 92 1.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS14790 b654a9ca24a5e15ade98ae67baef5899 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 4.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS14790 b654a9ca24a5e15ade98ae67baef5899 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 4.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS14790 b654a9ca24a5e15ade98ae67baef5899 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 4.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS02290 95de63b56ebba5e76eab8bc5cc884b0b 133 PANTHER PTHR33799 2 130 2.1E-52 T 22-04-2016 NHAM_RS02290 95de63b56ebba5e76eab8bc5cc884b0b 133 SUPERFAMILY SSF53062 1 128 1.83E-36 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 NHAM_RS02290 95de63b56ebba5e76eab8bc5cc884b0b 133 Pfam PF03610 PTS system fructose IIA component 3 115 5.9E-27 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 NHAM_RS02290 95de63b56ebba5e76eab8bc5cc884b0b 133 Gene3D G3DSA:3.40.50.510 1 128 4.2E-40 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 NHAM_RS02290 95de63b56ebba5e76eab8bc5cc884b0b 133 PANTHER PTHR33799:SF1 2 130 2.1E-52 T 22-04-2016 NHAM_RS14885 5d3d017553245500f4ba8d72d4b0a61e 84 Pfam PF02954 Bacterial regulatory protein, Fis family 33 73 6.3E-16 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NHAM_RS14885 5d3d017553245500f4ba8d72d4b0a61e 84 PANTHER PTHR32071:SF21 27 81 4.8E-15 T 22-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 NHAM_RS14885 5d3d017553245500f4ba8d72d4b0a61e 84 Gene3D G3DSA:1.10.10.60 13 73 2.9E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS14885 5d3d017553245500f4ba8d72d4b0a61e 84 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 56 76 8.7E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NHAM_RS14885 5d3d017553245500f4ba8d72d4b0a61e 84 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 39 56 8.7E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NHAM_RS14885 5d3d017553245500f4ba8d72d4b0a61e 84 PANTHER PTHR32071 27 81 4.8E-15 T 22-04-2016 NHAM_RS14885 5d3d017553245500f4ba8d72d4b0a61e 84 SUPERFAMILY SSF46689 9 73 1.79E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS15280 246f5dc8c30364bf3486286cd347cd56 302 SUPERFAMILY SSF53649 5 217 8.34E-49 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NHAM_RS15280 246f5dc8c30364bf3486286cd347cd56 302 Gene3D G3DSA:3.40.720.10 5 165 1.4E-37 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NHAM_RS15280 246f5dc8c30364bf3486286cd347cd56 302 PANTHER PTHR10342 9 261 3.7E-44 T 22-04-2016 NHAM_RS15280 246f5dc8c30364bf3486286cd347cd56 302 Pfam PF00884 Sulfatase 5 104 3.6E-25 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NHAM_RS15280 246f5dc8c30364bf3486286cd347cd56 302 PANTHER PTHR10342:SF241 9 261 3.7E-44 T 22-04-2016 NHAM_RS15280 246f5dc8c30364bf3486286cd347cd56 302 Gene3D G3DSA:3.30.1120.10 166 217 2.0E-6 T 22-04-2016 NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 Gene3D G3DSA:1.25.60.10 14 118 8.7E-16 T 22-04-2016 NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 SUPERFAMILY SSF54631 126 266 1.39E-28 T 22-04-2016 NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 Pfam PF03448 MgtE intracellular N domain 25 125 5.1E-21 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 PANTHER PTHR11911 114 410 2.4E-36 T 22-04-2016 NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 PANTHER PTHR11911 31 41 2.4E-36 T 22-04-2016 NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 SMART SM00116 198 246 4.2E-9 T 22-04-2016 IPR000644 CBS domain NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 SMART SM00116 134 188 6.5 T 22-04-2016 IPR000644 CBS domain NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 SUPERFAMILY SSF158791 10 124 2.88E-20 T 22-04-2016 NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 SMART SM00924 24 127 1.1E-23 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 Gene3D G3DSA:1.10.357.20 273 450 3.7E-58 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 Pfam PF00571 CBS domain 195 246 3.9E-8 T 22-04-2016 IPR000644 CBS domain NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 Pfam PF00571 CBS domain 128 184 1.6E-5 T 22-04-2016 IPR000644 CBS domain NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 Pfam PF01769 Divalent cation transporter 313 444 4.9E-30 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 PANTHER PTHR11911:SF23 114 410 2.4E-36 T 22-04-2016 NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 PANTHER PTHR11911:SF23 31 41 2.4E-36 T 22-04-2016 NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 450 9.1E-106 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 SUPERFAMILY SSF161093 273 450 9.68E-47 T 22-04-2016 NHAM_RS18085 20013174bef1d3a0bd54b08c83464bc4 455 Gene3D G3DSA:3.10.580.10 119 254 4.7E-20 T 22-04-2016 NHAM_RS13890 90bd33f60ff3aab2a49281fe6cc140f5 484 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 458 4.3E-52 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS13890 90bd33f60ff3aab2a49281fe6cc140f5 484 PRINTS PR01165 Cytochrome c oxidase subunit I signature 371 390 7.9E-5 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS13890 90bd33f60ff3aab2a49281fe6cc140f5 484 PRINTS PR01165 Cytochrome c oxidase subunit I signature 416 437 7.9E-5 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS13890 90bd33f60ff3aab2a49281fe6cc140f5 484 PRINTS PR01165 Cytochrome c oxidase subunit I signature 204 222 7.9E-5 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS13890 90bd33f60ff3aab2a49281fe6cc140f5 484 PRINTS PR01165 Cytochrome c oxidase subunit I signature 77 102 7.9E-5 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS13890 90bd33f60ff3aab2a49281fe6cc140f5 484 SUPERFAMILY SSF81442 15 478 3.66E-65 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS13890 90bd33f60ff3aab2a49281fe6cc140f5 484 Gene3D G3DSA:1.20.210.10 16 474 6.2E-40 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS08645 89cb7e4fce777f6eea2165eb7d561fef 1168 SMART SM00481 13 80 6.9E-23 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 NHAM_RS08645 89cb7e4fce777f6eea2165eb7d561fef 1168 SUPERFAMILY SSF160975 838 887 1.2E-9 T 22-04-2016 NHAM_RS08645 89cb7e4fce777f6eea2165eb7d561fef 1168 Pfam PF02811 PHP domain 14 185 3.7E-34 T 22-04-2016 IPR004013 PHP domain GO:0003824 NHAM_RS08645 89cb7e4fce777f6eea2165eb7d561fef 1168 SUPERFAMILY SSF89550 12 274 2.94E-13 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 NHAM_RS08645 89cb7e4fce777f6eea2165eb7d561fef 1168 Gene3D G3DSA:1.10.150.280 839 890 5.0E-8 T 22-04-2016 NHAM_RS08645 89cb7e4fce777f6eea2165eb7d561fef 1168 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 310 741 1.6E-174 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS08645 89cb7e4fce777f6eea2165eb7d561fef 1168 PANTHER PTHR32294 8 1164 0.0 T 22-04-2016 NHAM_RS08645 89cb7e4fce777f6eea2165eb7d561fef 1168 Pfam PF14579 Helix-hairpin-helix motif 815 901 9.7E-25 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS08645 89cb7e4fce777f6eea2165eb7d561fef 1168 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 12 1033 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS08645 89cb7e4fce777f6eea2165eb7d561fef 1168 PANTHER PTHR32294:SF0 8 1164 0.0 T 22-04-2016 NHAM_RS08645 89cb7e4fce777f6eea2165eb7d561fef 1168 Gene3D G3DSA:3.20.20.140 12 267 2.8E-22 T 22-04-2016 NHAM_RS14255 a714f4d927ebd85701a2a38765d3f2ce 424 PANTHER PTHR33217 4 422 3.1E-47 T 22-04-2016 NHAM_RS14255 a714f4d927ebd85701a2a38765d3f2ce 424 Pfam PF00872 Transposase, Mutator family 38 387 4.3E-33 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS14255 a714f4d927ebd85701a2a38765d3f2ce 424 PANTHER PTHR33217:SF2 4 422 3.1E-47 T 22-04-2016 NHAM_RS12585 024aa17283765dacefe092bd50baec05 510 Gene3D G3DSA:3.40.50.720 180 265 1.2E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS12585 024aa17283765dacefe092bd50baec05 510 Pfam PF13727 CoA-binding domain 99 279 2.4E-60 T 22-04-2016 NHAM_RS12585 024aa17283765dacefe092bd50baec05 510 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 56 510 3.9E-138 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase NHAM_RS12585 024aa17283765dacefe092bd50baec05 510 SUPERFAMILY SSF51735 181 268 1.61E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS12585 024aa17283765dacefe092bd50baec05 510 PANTHER PTHR30576:SF9 24 510 1.7E-282 T 22-04-2016 NHAM_RS12585 024aa17283765dacefe092bd50baec05 510 PANTHER PTHR30576 24 510 1.7E-282 T 22-04-2016 NHAM_RS12585 024aa17283765dacefe092bd50baec05 510 Pfam PF02397 Bacterial sugar transferase 315 504 1.8E-50 T 22-04-2016 IPR003362 Bacterial sugar transferase NHAM_RS12585 024aa17283765dacefe092bd50baec05 510 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 57 510 4.4E-147 T 22-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 NHAM_RS13705 04e1602d915dfdbce2774264c8827a61 188 Gene3D G3DSA:1.10.1740.10 12 106 4.8E-21 T 22-04-2016 NHAM_RS13705 04e1602d915dfdbce2774264c8827a61 188 Pfam PF04542 Sigma-70 region 2 22 85 5.0E-14 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS13705 04e1602d915dfdbce2774264c8827a61 188 SUPERFAMILY SSF88659 118 178 4.3E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS13705 04e1602d915dfdbce2774264c8827a61 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 179 3.8E-26 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS13705 04e1602d915dfdbce2774264c8827a61 188 Pfam PF08281 Sigma-70, region 4 125 176 3.1E-14 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS13705 04e1602d915dfdbce2774264c8827a61 188 Gene3D G3DSA:1.10.10.10 117 179 1.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS13705 04e1602d915dfdbce2774264c8827a61 188 SUPERFAMILY SSF88946 14 99 1.33E-18 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS13705 04e1602d915dfdbce2774264c8827a61 188 PANTHER PTHR30173 13 180 3.9E-31 T 22-04-2016 NHAM_RS09420 567df19f73aec12fb6e592f108ecc091 82 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 7 67 1.8E-32 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 NHAM_RS09420 567df19f73aec12fb6e592f108ecc091 82 Gene3D G3DSA:2.30.30.100 6 76 1.2E-35 T 22-04-2016 NHAM_RS09420 567df19f73aec12fb6e592f108ecc091 82 SUPERFAMILY SSF50182 8 72 7.63E-25 T 22-04-2016 IPR010920 LSM domain NHAM_RS09420 567df19f73aec12fb6e592f108ecc091 82 PANTHER PTHR34772:SF1 3 81 2.2E-36 T 22-04-2016 NHAM_RS09420 567df19f73aec12fb6e592f108ecc091 82 PANTHER PTHR34772 3 81 2.2E-36 T 22-04-2016 NHAM_RS09420 567df19f73aec12fb6e592f108ecc091 82 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 5 67 29.405 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 NHAM_RS08120 da14dd729aab0c33cfea6f046e1e77b7 110 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 6 102 27.486 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 NHAM_RS08120 da14dd729aab0c33cfea6f046e1e77b7 110 PRINTS PR01727 Prokaryotic integration host factor signature 65 78 6.3E-12 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS08120 da14dd729aab0c33cfea6f046e1e77b7 110 PRINTS PR01727 Prokaryotic integration host factor signature 47 62 6.3E-12 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS08120 da14dd729aab0c33cfea6f046e1e77b7 110 PRINTS PR01727 Prokaryotic integration host factor signature 81 95 6.3E-12 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS08120 da14dd729aab0c33cfea6f046e1e77b7 110 SUPERFAMILY SSF47729 9 100 7.07E-28 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NHAM_RS08120 da14dd729aab0c33cfea6f046e1e77b7 110 Pfam PF00216 Bacterial DNA-binding protein 9 97 5.9E-27 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS08120 da14dd729aab0c33cfea6f046e1e77b7 110 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 53 72 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 NHAM_RS08120 da14dd729aab0c33cfea6f046e1e77b7 110 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 7 99 2.1E-38 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 NHAM_RS08120 da14dd729aab0c33cfea6f046e1e77b7 110 Gene3D G3DSA:4.10.520.10 7 98 7.9E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NHAM_RS08120 da14dd729aab0c33cfea6f046e1e77b7 110 PANTHER PTHR33175:SF2 8 108 8.7E-55 T 22-04-2016 NHAM_RS08120 da14dd729aab0c33cfea6f046e1e77b7 110 PANTHER PTHR33175 8 108 8.7E-55 T 22-04-2016 NHAM_RS08120 da14dd729aab0c33cfea6f046e1e77b7 110 SMART SM00411 8 97 1.8E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS15855 83c4acb464f7e71c44f6f1c96067e63c 109 SMART SM00318 7 109 0.0035 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold NHAM_RS15855 83c4acb464f7e71c44f6f1c96067e63c 109 SUPERFAMILY SSF50199 12 103 4.71E-24 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold NHAM_RS15855 83c4acb464f7e71c44f6f1c96067e63c 109 Pfam PF00565 Staphylococcal nuclease homologue 25 101 2.7E-12 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold NHAM_RS15855 83c4acb464f7e71c44f6f1c96067e63c 109 Gene3D G3DSA:2.40.50.90 7 99 2.1E-23 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold NHAM_RS15855 83c4acb464f7e71c44f6f1c96067e63c 109 ProSitePatterns PS01284 Thermonuclease family signature 2. 71 81 - T 22-04-2016 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 NHAM_RS15855 83c4acb464f7e71c44f6f1c96067e63c 109 PANTHER PTHR12302:SF0 13 107 1.6E-17 T 22-04-2016 NHAM_RS15855 83c4acb464f7e71c44f6f1c96067e63c 109 PANTHER PTHR12302 13 107 1.6E-17 T 22-04-2016 NHAM_RS13075 ba2638629245689aca236bdaba784ca5 299 PANTHER PTHR22981 4 296 1.9E-104 T 22-04-2016 NHAM_RS13075 ba2638629245689aca236bdaba784ca5 299 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 NHAM_RS13075 ba2638629245689aca236bdaba784ca5 299 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 162 288 6.5E-40 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 NHAM_RS13075 ba2638629245689aca236bdaba784ca5 299 SUPERFAMILY SSF48179 162 290 9.18E-41 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS13075 ba2638629245689aca236bdaba784ca5 299 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 290 5.5E-126 T 22-04-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|UniPathway: UPA00362 NHAM_RS13075 ba2638629245689aca236bdaba784ca5 299 Gene3D G3DSA:3.40.50.720 2 160 3.0E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS13075 ba2638629245689aca236bdaba784ca5 299 SUPERFAMILY SSF51735 3 159 2.76E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS13075 ba2638629245689aca236bdaba784ca5 299 Gene3D G3DSA:1.10.1040.10 162 293 1.2E-46 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NHAM_RS13075 ba2638629245689aca236bdaba784ca5 299 PIRSF PIRSF000103 1 298 3.1E-78 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 NHAM_RS13075 ba2638629245689aca236bdaba784ca5 299 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 159 7.1E-46 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NHAM_RS14400 5bfe76c3c8de26642f936feb9429b422 450 PANTHER PTHR30483 46 449 4.8E-59 T 22-04-2016 NHAM_RS14400 5bfe76c3c8de26642f936feb9429b422 450 SUPERFAMILY SSF53822 59 440 7.06E-78 T 22-04-2016 IPR028082 Periplasmic binding protein-like I NHAM_RS14400 5bfe76c3c8de26642f936feb9429b422 450 Gene3D G3DSA:3.40.50.2300 202 348 2.9E-22 T 22-04-2016 NHAM_RS14400 5bfe76c3c8de26642f936feb9429b422 450 Gene3D G3DSA:3.40.50.2300 54 195 1.1E-40 T 22-04-2016 NHAM_RS14400 5bfe76c3c8de26642f936feb9429b422 450 Gene3D G3DSA:3.40.50.2300 349 402 1.1E-40 T 22-04-2016 NHAM_RS14400 5bfe76c3c8de26642f936feb9429b422 450 Pfam PF13458 Periplasmic binding protein 59 412 2.2E-66 T 22-04-2016 IPR028081 Leucine-binding protein domain NHAM_RS14900 349446f7807ad67010c30b1642ab6d1a 85 PANTHER PTHR37424:SF1 2 85 4.3E-14 T 22-04-2016 NHAM_RS14900 349446f7807ad67010c30b1642ab6d1a 85 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 54 8.5E-6 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain NHAM_RS14900 349446f7807ad67010c30b1642ab6d1a 85 PANTHER PTHR37424 2 85 4.3E-14 T 22-04-2016 NHAM_RS06280 df5aa071ce80a0e15345128d352085f4 157 Pfam PF12244 Protein of unknown function (DUF3606) 58 109 6.5E-22 T 22-04-2016 IPR022037 Protein of unknown function DUF3606 NHAM_RS06280 df5aa071ce80a0e15345128d352085f4 157 Pfam PF12244 Protein of unknown function (DUF3606) 4 57 2.1E-21 T 22-04-2016 IPR022037 Protein of unknown function DUF3606 NHAM_RS00855 3bb3fa089828976cfc6ad11fc5b0a9f2 132 Pfam PF06059 Domain of Unknown Function (DUF930) 32 130 1.9E-33 T 22-04-2016 IPR009273 Protein of unknown function DUF930 NHAM_RS13145 58587dcc4ae5f307e9f8583efadcb792 197 SUPERFAMILY SSF81342 4 181 3.84E-33 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 NHAM_RS13145 58587dcc4ae5f307e9f8583efadcb792 197 PANTHER PTHR30529 1 183 1.2E-61 T 22-04-2016 NHAM_RS13145 58587dcc4ae5f307e9f8583efadcb792 197 Pfam PF01292 Prokaryotic cytochrome b561 9 180 5.2E-24 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NHAM_RS13145 58587dcc4ae5f307e9f8583efadcb792 197 PANTHER PTHR30529:SF5 1 183 1.2E-61 T 22-04-2016 NHAM_RS09925 ea43bd2bbbf928927c708e10ec49e0b8 279 SUPERFAMILY SSF52402 154 277 5.44E-17 T 22-04-2016 NHAM_RS09925 ea43bd2bbbf928927c708e10ec49e0b8 279 Gene3D G3DSA:3.40.50.620 140 277 1.8E-14 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS09925 ea43bd2bbbf928927c708e10ec49e0b8 279 PRINTS PR01438 Universal stress protein signature 257 279 7.1E-7 T 22-04-2016 IPR006015 Universal stress protein A NHAM_RS09925 ea43bd2bbbf928927c708e10ec49e0b8 279 PRINTS PR01438 Universal stress protein signature 156 174 7.1E-7 T 22-04-2016 IPR006015 Universal stress protein A NHAM_RS09925 ea43bd2bbbf928927c708e10ec49e0b8 279 PRINTS PR01438 Universal stress protein signature 239 251 7.1E-7 T 22-04-2016 IPR006015 Universal stress protein A NHAM_RS09925 ea43bd2bbbf928927c708e10ec49e0b8 279 Pfam PF00582 Universal stress protein family 157 276 1.2E-6 T 22-04-2016 IPR006016 UspA GO:0006950 NHAM_RS08440 c503c7d6e97649077e57f66e82a541a6 147 PANTHER PTHR23022 31 139 8.9E-15 T 22-04-2016 NHAM_RS08440 c503c7d6e97649077e57f66e82a541a6 147 Pfam PF13358 DDE superfamily endonuclease 22 119 1.4E-23 T 22-04-2016 NHAM_RS18455 6bf1781e6f5b4c5fa233239e96a56e35 209 Gene3D G3DSA:1.20.950.20 21 209 5.3E-48 T 22-04-2016 NHAM_RS18455 6bf1781e6f5b4c5fa233239e96a56e35 209 SUPERFAMILY SSF81342 17 209 6.91E-38 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 NHAM_RS18455 6bf1781e6f5b4c5fa233239e96a56e35 209 PANTHER PTHR30485 1 209 7.4E-70 T 22-04-2016 NHAM_RS18455 6bf1781e6f5b4c5fa233239e96a56e35 209 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 174 196 4.1E-6 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 NHAM_RS18455 6bf1781e6f5b4c5fa233239e96a56e35 209 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 22 45 4.1E-6 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 NHAM_RS18455 6bf1781e6f5b4c5fa233239e96a56e35 209 PANTHER PTHR30485:SF1 1 209 7.4E-70 T 22-04-2016 NHAM_RS18455 6bf1781e6f5b4c5fa233239e96a56e35 209 Pfam PF01292 Prokaryotic cytochrome b561 21 206 2.7E-26 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NHAM_RS14615 20d6425dd4bcf881dda511b58190b3c8 100 PANTHER PTHR36924 1 93 2.8E-46 T 22-04-2016 NHAM_RS14615 20d6425dd4bcf881dda511b58190b3c8 100 Pfam PF01381 Helix-turn-helix 21 67 3.5E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS14615 20d6425dd4bcf881dda511b58190b3c8 100 Gene3D G3DSA:1.10.260.40 2 95 2.0E-32 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS14615 20d6425dd4bcf881dda511b58190b3c8 100 SMART SM00530 13 69 4.1E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS14615 20d6425dd4bcf881dda511b58190b3c8 100 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 5 83 6.6E-33 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 NHAM_RS14615 20d6425dd4bcf881dda511b58190b3c8 100 SUPERFAMILY SSF47413 9 92 8.73E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS14615 20d6425dd4bcf881dda511b58190b3c8 100 PANTHER PTHR36924:SF1 1 93 2.8E-46 T 22-04-2016 NHAM_RS11520 6622dce9aa51ab9db87cdec02fc828cf 139 PANTHER PTHR30266 1 136 7.7E-52 T 22-04-2016 NHAM_RS11520 6622dce9aa51ab9db87cdec02fc828cf 139 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site NHAM_RS11520 6622dce9aa51ab9db87cdec02fc828cf 139 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 8.2E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NHAM_RS11520 6622dce9aa51ab9db87cdec02fc828cf 139 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 8.2E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NHAM_RS11520 6622dce9aa51ab9db87cdec02fc828cf 139 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 8.2E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NHAM_RS11520 6622dce9aa51ab9db87cdec02fc828cf 139 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 137 4.4E-42 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NHAM_RS11520 6622dce9aa51ab9db87cdec02fc828cf 139 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 139 27.18 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NHAM_RS11520 6622dce9aa51ab9db87cdec02fc828cf 139 SUPERFAMILY SSF81330 10 132 5.1E-35 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NHAM_RS11520 6622dce9aa51ab9db87cdec02fc828cf 139 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 136 9.9E-45 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NHAM_RS11520 6622dce9aa51ab9db87cdec02fc828cf 139 PANTHER PTHR30266:SF2 1 136 7.7E-52 T 22-04-2016 NHAM_RS23900 636803c87aca11ef71bb5f4a293eeaf9 107 ProSitePatterns PS00622 LuxR-type HTH domain signature. 59 86 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS23900 636803c87aca11ef71bb5f4a293eeaf9 107 PANTHER PTHR26402 2 107 2.3E-19 T 22-04-2016 NHAM_RS23900 636803c87aca11ef71bb5f4a293eeaf9 107 SUPERFAMILY SSF46894 37 105 3.33E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS23900 636803c87aca11ef71bb5f4a293eeaf9 107 Gene3D G3DSA:1.10.10.10 35 105 3.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS23900 636803c87aca11ef71bb5f4a293eeaf9 107 Pfam PF00196 Bacterial regulatory proteins, luxR family 45 98 7.7E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS23900 636803c87aca11ef71bb5f4a293eeaf9 107 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 45 59 9.0E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS23900 636803c87aca11ef71bb5f4a293eeaf9 107 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 59 75 9.0E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS23900 636803c87aca11ef71bb5f4a293eeaf9 107 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 75 87 9.0E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS23900 636803c87aca11ef71bb5f4a293eeaf9 107 SMART SM00421 42 99 1.5E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS23900 636803c87aca11ef71bb5f4a293eeaf9 107 PANTHER PTHR26402:SF151 2 107 2.3E-19 T 22-04-2016 NHAM_RS02040 ff467525b9fdd3026f0a0ef413756f8c 473 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 365 398 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 NHAM_RS02040 ff467525b9fdd3026f0a0ef413756f8c 473 PRINTS PR00811 Bacterial general secretion pathway protein D signature 178 188 1.3E-12 T 22-04-2016 IPR001775 GspD/PilQ family NHAM_RS02040 ff467525b9fdd3026f0a0ef413756f8c 473 PRINTS PR00811 Bacterial general secretion pathway protein D signature 251 275 1.3E-12 T 22-04-2016 IPR001775 GspD/PilQ family NHAM_RS02040 ff467525b9fdd3026f0a0ef413756f8c 473 PRINTS PR00811 Bacterial general secretion pathway protein D signature 384 402 1.3E-12 T 22-04-2016 IPR001775 GspD/PilQ family NHAM_RS02040 ff467525b9fdd3026f0a0ef413756f8c 473 PRINTS PR00811 Bacterial general secretion pathway protein D signature 407 421 1.3E-12 T 22-04-2016 IPR001775 GspD/PilQ family NHAM_RS02040 ff467525b9fdd3026f0a0ef413756f8c 473 Pfam PF13629 Pilus formation protein N terminal region 40 110 7.9E-21 T 22-04-2016 IPR032789 Pilus formation protein, N-terminal NHAM_RS02040 ff467525b9fdd3026f0a0ef413756f8c 473 PANTHER PTHR30332 50 473 4.8E-184 T 22-04-2016 NHAM_RS02040 ff467525b9fdd3026f0a0ef413756f8c 473 PANTHER PTHR30332:SF6 50 473 4.8E-184 T 22-04-2016 NHAM_RS02040 ff467525b9fdd3026f0a0ef413756f8c 473 Pfam PF00263 Bacterial type II and III secretion system protein 255 420 2.5E-44 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 NHAM_RS02040 ff467525b9fdd3026f0a0ef413756f8c 473 Pfam PF04972 BON domain 115 174 8.5E-9 T 22-04-2016 IPR007055 BON domain NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 SUPERFAMILY SSF50129 326 354 3.2E-37 T 22-04-2016 IPR011032 GroES-like NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 SUPERFAMILY SSF50129 3 153 3.2E-37 T 22-04-2016 IPR011032 GroES-like NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 PANTHER PTHR11695 15 87 1.7E-108 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 PANTHER PTHR11695 116 357 1.7E-108 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 138 1.1E-21 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 PANTHER PTHR11695:SF281 15 87 1.7E-108 T 22-04-2016 NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 PANTHER PTHR11695:SF281 116 357 1.7E-108 T 22-04-2016 NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 Gene3D G3DSA:3.40.50.720 179 293 3.1E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 Pfam PF00107 Zinc-binding dehydrogenase 186 304 3.3E-28 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 Gene3D G3DSA:3.90.180.10 3 178 1.1E-38 T 22-04-2016 IPR011032 GroES-like NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 SUPERFAMILY SSF51735 149 319 1.45E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS12960 07464934f7ce4c9811d6cdb4eeb92f07 357 SMART SM00829 13 351 5.2E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NHAM_RS11160 cb3b41e686c610fc4a8a5911bccd7dde 362 Pfam PF13581 Histidine kinase-like ATPase domain 248 329 1.3E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11160 cb3b41e686c610fc4a8a5911bccd7dde 362 SUPERFAMILY SSF52172 5 134 6.26E-29 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS11160 cb3b41e686c610fc4a8a5911bccd7dde 362 Pfam PF00072 Response regulator receiver domain 8 106 6.7E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS11160 cb3b41e686c610fc4a8a5911bccd7dde 362 Gene3D G3DSA:3.40.50.2300 5 134 7.6E-29 T 22-04-2016 NHAM_RS11160 cb3b41e686c610fc4a8a5911bccd7dde 362 SMART SM00448 5 115 8.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS11160 cb3b41e686c610fc4a8a5911bccd7dde 362 SMART SM00387 254 350 9.1E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11160 cb3b41e686c610fc4a8a5911bccd7dde 362 Pfam PF07568 Histidine kinase 159 233 7.7E-23 T 22-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain NHAM_RS11160 cb3b41e686c610fc4a8a5911bccd7dde 362 PANTHER PTHR26402 5 131 8.1E-27 T 22-04-2016 NHAM_RS11160 cb3b41e686c610fc4a8a5911bccd7dde 362 PANTHER PTHR26402 246 255 8.1E-27 T 22-04-2016 NHAM_RS11160 cb3b41e686c610fc4a8a5911bccd7dde 362 SUPERFAMILY SSF55874 219 346 4.85E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS11160 cb3b41e686c610fc4a8a5911bccd7dde 362 Gene3D G3DSA:3.30.565.10 212 347 1.8E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS10675 5ca7af0dc5a51a47438410bc96a2d3c4 290 Gene3D G3DSA:1.20.1050.10 130 254 7.4E-46 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS10675 5ca7af0dc5a51a47438410bc96a2d3c4 290 PANTHER PTHR11260:SF258 18 262 1.5E-116 T 22-04-2016 NHAM_RS10675 5ca7af0dc5a51a47438410bc96a2d3c4 290 Pfam PF02798 Glutathione S-transferase, N-terminal domain 64 126 7.6E-6 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NHAM_RS10675 5ca7af0dc5a51a47438410bc96a2d3c4 290 Pfam PF00043 Glutathione S-transferase, C-terminal domain 181 250 9.5E-9 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal NHAM_RS10675 5ca7af0dc5a51a47438410bc96a2d3c4 290 PANTHER PTHR11260 18 262 1.5E-116 T 22-04-2016 NHAM_RS10675 5ca7af0dc5a51a47438410bc96a2d3c4 290 SUPERFAMILY SSF47616 132 279 5.85E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS10675 5ca7af0dc5a51a47438410bc96a2d3c4 290 SUPERFAMILY SSF52833 37 129 3.77E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS10675 5ca7af0dc5a51a47438410bc96a2d3c4 290 Gene3D G3DSA:3.40.30.10 32 129 1.6E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS08065 28ebf01e30dada5a44d4040c4ce3af9a 260 Gene3D G3DSA:3.30.2180.10 11 85 2.1E-22 T 22-04-2016 NHAM_RS08065 28ebf01e30dada5a44d4040c4ce3af9a 260 PANTHER PTHR21013:SF11 16 246 7.0E-105 T 22-04-2016 NHAM_RS08065 28ebf01e30dada5a44d4040c4ce3af9a 260 PANTHER PTHR21013 16 246 7.0E-105 T 22-04-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 NHAM_RS08065 28ebf01e30dada5a44d4040c4ce3af9a 260 SUPERFAMILY SSF160909 12 252 2.35E-82 T 22-04-2016 NHAM_RS08065 28ebf01e30dada5a44d4040c4ce3af9a 260 Gene3D G3DSA:1.10.3580.10 88 253 2.0E-52 T 22-04-2016 IPR023335 Orthogonal Bundle domain in ATP12 NHAM_RS08065 28ebf01e30dada5a44d4040c4ce3af9a 260 Pfam PF07542 ATP12 chaperone protein 29 146 8.2E-33 T 22-04-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 NHAM_RS00155 b24778a1b3c94322aebb3f9be9ff6125 137 Pfam PF02033 Ribosome-binding factor A 16 121 4.7E-26 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 NHAM_RS00155 b24778a1b3c94322aebb3f9be9ff6125 137 PANTHER PTHR33515 14 136 1.3E-31 T 22-04-2016 NHAM_RS00155 b24778a1b3c94322aebb3f9be9ff6125 137 Gene3D G3DSA:3.30.300.20 14 128 8.0E-31 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta NHAM_RS00155 b24778a1b3c94322aebb3f9be9ff6125 137 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 19 108 3.0E-46 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 NHAM_RS00155 b24778a1b3c94322aebb3f9be9ff6125 137 SUPERFAMILY SSF89919 13 123 1.96E-29 T 22-04-2016 IPR023799 Ribosome-binding factor A domain NHAM_RS00155 b24778a1b3c94322aebb3f9be9ff6125 137 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 12 128 18.887 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 NHAM_RS00155 b24778a1b3c94322aebb3f9be9ff6125 137 ProSitePatterns PS01319 Ribosome-binding factor A signature. 87 108 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 NHAM_RS00155 b24778a1b3c94322aebb3f9be9ff6125 137 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 14 122 1.0E-17 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 NHAM_RS20360 380a9fbdbfcb23a145d73cde03b15c9e 190 SUPERFAMILY SSF52218 6 175 2.79E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain NHAM_RS20360 380a9fbdbfcb23a145d73cde03b15c9e 190 PANTHER PTHR30543:SF6 1 182 5.4E-48 T 22-04-2016 NHAM_RS20360 380a9fbdbfcb23a145d73cde03b15c9e 190 Pfam PF03358 NADPH-dependent FMN reductase 6 148 8.9E-32 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 NHAM_RS20360 380a9fbdbfcb23a145d73cde03b15c9e 190 Gene3D G3DSA:3.40.50.360 5 181 5.9E-43 T 22-04-2016 IPR029039 Flavoprotein-like domain NHAM_RS20360 380a9fbdbfcb23a145d73cde03b15c9e 190 PANTHER PTHR30543 1 182 5.4E-48 T 22-04-2016 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 72 97 9.1E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 482 499 9.1E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 458 473 9.1E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 393 411 9.1E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 164 9.1E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 295 314 9.1E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 417 435 9.1E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 265 281 9.1E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 166 185 9.1E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 SUPERFAMILY SSF56235 43 578 1.72E-183 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal NHAM_RS00960 97adf6c0d6343766889e334397893874 581 Pfam PF01019 Gamma-glutamyltranspeptidase 65 575 8.2E-173 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 393 417 - T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 PANTHER PTHR11686 3 581 1.3E-203 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 PANTHER PTHR11686:SF9 3 581 1.3E-203 T 22-04-2016 NHAM_RS00960 97adf6c0d6343766889e334397893874 581 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 50 572 8.0E-173 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NHAM_RS08420 c44674bd45524c5a4bcbe9746e20bebf 262 PANTHER PTHR22936 183 249 1.5E-21 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 NHAM_RS08420 c44674bd45524c5a4bcbe9746e20bebf 262 PANTHER PTHR22936 76 154 1.5E-21 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 NHAM_RS08420 c44674bd45524c5a4bcbe9746e20bebf 262 Gene3D G3DSA:1.20.1540.10 26 242 1.6E-30 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NHAM_RS08420 c44674bd45524c5a4bcbe9746e20bebf 262 SUPERFAMILY SSF144091 16 248 2.09E-29 T 22-04-2016 NHAM_RS08420 c44674bd45524c5a4bcbe9746e20bebf 262 Pfam PF01694 Rhomboid family 75 241 3.5E-27 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NHAM_RS08420 c44674bd45524c5a4bcbe9746e20bebf 262 PANTHER PTHR22936:SF4 183 249 1.5E-21 T 22-04-2016 NHAM_RS08420 c44674bd45524c5a4bcbe9746e20bebf 262 PANTHER PTHR22936:SF4 76 154 1.5E-21 T 22-04-2016 NHAM_RS17045 992f18425e3a89d5078d7b42a00688e5 743 Pfam PF10145 Phage-related minor tail protein 100 270 6.6E-23 T 22-04-2016 IPR010090 Phage tail tape measure protein NHAM_RS17045 992f18425e3a89d5078d7b42a00688e5 743 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 56 402 1.5E-29 T 22-04-2016 IPR010090 Phage tail tape measure protein NHAM_RS09805 418877677ba21056ebf11d814ef382fa 259 PANTHER PTHR24220 11 250 1.1E-134 T 22-04-2016 NHAM_RS09805 418877677ba21056ebf11d814ef382fa 259 SUPERFAMILY SSF52540 9 238 2.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09805 418877677ba21056ebf11d814ef382fa 259 PANTHER PTHR24220:SF483 11 250 1.1E-134 T 22-04-2016 NHAM_RS09805 418877677ba21056ebf11d814ef382fa 259 Gene3D G3DSA:3.40.50.300 7 239 8.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09805 418877677ba21056ebf11d814ef382fa 259 SMART SM00382 34 232 2.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS09805 418877677ba21056ebf11d814ef382fa 259 Pfam PF00005 ABC transporter 26 175 1.4E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS04990 d1e6b347b84d17fedef82a415cff1610 439 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 431 38.017 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 NHAM_RS04990 d1e6b347b84d17fedef82a415cff1610 439 Pfam PF04285 Protein of unknown function (DUF444) 3 429 2.2E-165 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 NHAM_RS04990 d1e6b347b84d17fedef82a415cff1610 439 SUPERFAMILY SSF53300 251 351 2.6E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A NHAM_RS04990 d1e6b347b84d17fedef82a415cff1610 439 PANTHER PTHR30510 1 435 1.4E-132 T 22-04-2016 NHAM_RS01150 3561cf82e53ce6eb8cfbb69149ae92be 732 Pfam PF00912 Transglycosylase 137 308 3.9E-65 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 NHAM_RS01150 3561cf82e53ce6eb8cfbb69149ae92be 732 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 146 664 7.9E-187 T 22-04-2016 NHAM_RS01150 3561cf82e53ce6eb8cfbb69149ae92be 732 Gene3D G3DSA:3.40.710.10 311 673 1.2E-118 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS01150 3561cf82e53ce6eb8cfbb69149ae92be 732 PANTHER PTHR32282 62 672 2.7E-242 T 22-04-2016 NHAM_RS01150 3561cf82e53ce6eb8cfbb69149ae92be 732 PANTHER PTHR32282:SF5 62 672 2.7E-242 T 22-04-2016 NHAM_RS01150 3561cf82e53ce6eb8cfbb69149ae92be 732 Pfam PF00905 Penicillin binding protein transpeptidase domain 394 627 2.4E-35 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NHAM_RS01150 3561cf82e53ce6eb8cfbb69149ae92be 732 Gene3D G3DSA:1.10.3810.10 135 310 2.6E-74 T 22-04-2016 NHAM_RS01150 3561cf82e53ce6eb8cfbb69149ae92be 732 SUPERFAMILY SSF56601 339 672 4.91E-120 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS01150 3561cf82e53ce6eb8cfbb69149ae92be 732 SUPERFAMILY SSF56601 290 312 4.91E-120 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS01150 3561cf82e53ce6eb8cfbb69149ae92be 732 SUPERFAMILY SSF53955 123 329 3.09E-75 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS01120 8693dc94285de1bfab2a8d9f6d794813 253 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 71 204 1.4E-7 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS01120 8693dc94285de1bfab2a8d9f6d794813 253 Gene3D G3DSA:3.40.50.1110 57 220 1.3E-14 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS01120 8693dc94285de1bfab2a8d9f6d794813 253 SUPERFAMILY SSF52266 55 207 3.87E-17 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 SUPERFAMILY SSF75553 499 650 1.28E-7 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 SMART SM00968 514 603 0.003 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1156 4.9E-255 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 Gene3D G3DSA:3.40.50.300 1 166 1.7E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 Gene3D G3DSA:3.40.50.300 1003 1161 1.7E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 SUPERFAMILY SSF52540 955 1158 4.63E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 SUPERFAMILY SSF52540 1 210 4.63E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1158 20.901 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 PANTHER PTHR18937 600 1167 0.0 T 22-04-2016 NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 PANTHER PTHR18937 1 578 0.0 T 22-04-2016 NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 PANTHER PTHR18937:SF261 600 1167 0.0 T 22-04-2016 NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 PANTHER PTHR18937:SF261 1 578 0.0 T 22-04-2016 NHAM_RS16550 0a5834e1e5c7fcdc50ed4e442ce555b9 1168 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1149 1.8E-59 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal NHAM_RS06780 8f7fd8bd2ee4e36b606541dcb5fc8add 141 PANTHER PTHR31964:SF42 1 140 1.6E-22 T 22-04-2016 NHAM_RS06780 8f7fd8bd2ee4e36b606541dcb5fc8add 141 SUPERFAMILY SSF52402 2 140 5.86E-29 T 22-04-2016 NHAM_RS06780 8f7fd8bd2ee4e36b606541dcb5fc8add 141 PRINTS PR01438 Universal stress protein signature 2 20 1.5E-11 T 22-04-2016 IPR006015 Universal stress protein A NHAM_RS06780 8f7fd8bd2ee4e36b606541dcb5fc8add 141 PRINTS PR01438 Universal stress protein signature 118 140 1.5E-11 T 22-04-2016 IPR006015 Universal stress protein A NHAM_RS06780 8f7fd8bd2ee4e36b606541dcb5fc8add 141 PRINTS PR01438 Universal stress protein signature 101 113 1.5E-11 T 22-04-2016 IPR006015 Universal stress protein A NHAM_RS06780 8f7fd8bd2ee4e36b606541dcb5fc8add 141 Pfam PF00582 Universal stress protein family 1 140 3.7E-27 T 22-04-2016 IPR006016 UspA GO:0006950 NHAM_RS06780 8f7fd8bd2ee4e36b606541dcb5fc8add 141 PANTHER PTHR31964 1 140 1.6E-22 T 22-04-2016 NHAM_RS06780 8f7fd8bd2ee4e36b606541dcb5fc8add 141 Gene3D G3DSA:3.40.50.620 2 140 1.1E-33 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS12975 1621a32f1b6cd48ee93f13eaea4adcbf 619 SMART SM00382 399 590 6.1E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS12975 1621a32f1b6cd48ee93f13eaea4adcbf 619 Gene3D G3DSA:3.40.50.300 375 608 8.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS12975 1621a32f1b6cd48ee93f13eaea4adcbf 619 PANTHER PTHR24221:SF157 84 619 2.3E-186 T 22-04-2016 NHAM_RS12975 1621a32f1b6cd48ee93f13eaea4adcbf 619 PANTHER PTHR24221:SF157 23 67 2.3E-186 T 22-04-2016 NHAM_RS12975 1621a32f1b6cd48ee93f13eaea4adcbf 619 Pfam PF00664 ABC transporter transmembrane region 78 316 2.3E-7 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS12975 1621a32f1b6cd48ee93f13eaea4adcbf 619 Pfam PF00005 ABC transporter 391 544 2.1E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS12975 1621a32f1b6cd48ee93f13eaea4adcbf 619 SUPERFAMILY SSF90123 24 336 1.05E-26 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS12975 1621a32f1b6cd48ee93f13eaea4adcbf 619 SUPERFAMILY SSF52540 362 614 3.84E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS12975 1621a32f1b6cd48ee93f13eaea4adcbf 619 Gene3D G3DSA:1.20.1560.10 28 359 5.3E-21 T 22-04-2016 NHAM_RS12975 1621a32f1b6cd48ee93f13eaea4adcbf 619 ProSitePatterns PS00211 ABC transporters family signature. 516 530 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS12975 1621a32f1b6cd48ee93f13eaea4adcbf 619 PANTHER PTHR24221 84 619 2.3E-186 T 22-04-2016 NHAM_RS12975 1621a32f1b6cd48ee93f13eaea4adcbf 619 PANTHER PTHR24221 23 67 2.3E-186 T 22-04-2016 NHAM_RS17220 b9797b377ad631f2e0e26a649acba990 354 SMART SM00530 6 61 1.2E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS17220 b9797b377ad631f2e0e26a649acba990 354 PANTHER PTHR10245 5 265 6.5E-16 T 22-04-2016 NHAM_RS17220 b9797b377ad631f2e0e26a649acba990 354 Pfam PF01381 Helix-turn-helix 10 60 5.1E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS17220 b9797b377ad631f2e0e26a649acba990 354 PANTHER PTHR10245:SF22 5 265 6.5E-16 T 22-04-2016 NHAM_RS17220 b9797b377ad631f2e0e26a649acba990 354 Pfam PF06114 Domain of unknown function (DUF955) 150 264 6.5E-18 T 22-04-2016 IPR010359 HTH domain, IrrE-type NHAM_RS17220 b9797b377ad631f2e0e26a649acba990 354 SUPERFAMILY SSF47413 4 68 7.32E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS17220 b9797b377ad631f2e0e26a649acba990 354 Gene3D G3DSA:1.10.260.40 5 69 3.5E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS13630 49dc2d6ce4fa899b6a11ab149213a3dc 189 Gene3D G3DSA:1.10.10.10 119 180 1.5E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS13630 49dc2d6ce4fa899b6a11ab149213a3dc 189 SUPERFAMILY SSF88659 120 179 4.58E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS13630 49dc2d6ce4fa899b6a11ab149213a3dc 189 PANTHER PTHR30173 1 186 4.0E-116 T 22-04-2016 NHAM_RS13630 49dc2d6ce4fa899b6a11ab149213a3dc 189 Pfam PF04542 Sigma-70 region 2 27 93 3.5E-15 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS13630 49dc2d6ce4fa899b6a11ab149213a3dc 189 Pfam PF08281 Sigma-70, region 4 123 175 1.7E-14 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS13630 49dc2d6ce4fa899b6a11ab149213a3dc 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 176 6.5E-29 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS13630 49dc2d6ce4fa899b6a11ab149213a3dc 189 Gene3D G3DSA:1.10.1740.10 5 118 8.7E-30 T 22-04-2016 NHAM_RS13630 49dc2d6ce4fa899b6a11ab149213a3dc 189 PANTHER PTHR30173:SF19 1 186 4.0E-116 T 22-04-2016 NHAM_RS13630 49dc2d6ce4fa899b6a11ab149213a3dc 189 SUPERFAMILY SSF88946 6 104 5.49E-25 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NHAM_RS20535 dceddd774f81b22dbae5cedaab15cdf1 328 Pfam PF01300 Telomere recombination 23 198 2.6E-55 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 NHAM_RS20535 dceddd774f81b22dbae5cedaab15cdf1 328 PANTHER PTHR17490 1 327 1.2E-97 T 22-04-2016 NHAM_RS20535 dceddd774f81b22dbae5cedaab15cdf1 328 Pfam PF03481 Putative GTP-binding controlling metal-binding 202 325 1.9E-21 T 22-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain NHAM_RS20535 dceddd774f81b22dbae5cedaab15cdf1 328 Gene3D G3DSA:3.90.870.10 13 210 9.5E-73 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain NHAM_RS20535 dceddd774f81b22dbae5cedaab15cdf1 328 PIRSF PIRSF004930 1 328 5.9E-110 T 22-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 NHAM_RS20535 dceddd774f81b22dbae5cedaab15cdf1 328 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 17 209 7.2E-55 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 NHAM_RS20535 dceddd774f81b22dbae5cedaab15cdf1 328 PANTHER PTHR17490:SF3 1 327 1.2E-97 T 22-04-2016 NHAM_RS20535 dceddd774f81b22dbae5cedaab15cdf1 328 SUPERFAMILY SSF55821 17 210 1.37E-61 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain NHAM_RS09625 6f13509856bf2ad36a3945bf8e93ce83 104 Pfam PF13670 Peptidase propeptide and YPEB domain 13 100 8.0E-9 T 22-04-2016 IPR025711 PepSY domain NHAM_RS12425 5f45d60bad11fb7edb206ee4df31d211 265 SUPERFAMILY SSF88713 48 245 4.17E-47 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NHAM_RS12425 5f45d60bad11fb7edb206ee4df31d211 265 PANTHER PTHR10587:SF70 29 245 4.3E-62 T 22-04-2016 NHAM_RS12425 5f45d60bad11fb7edb206ee4df31d211 265 PANTHER PTHR10587 29 245 4.3E-62 T 22-04-2016 NHAM_RS12425 5f45d60bad11fb7edb206ee4df31d211 265 Gene3D G3DSA:3.20.20.370 49 245 4.5E-47 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS12425 5f45d60bad11fb7edb206ee4df31d211 265 Pfam PF01522 Polysaccharide deacetylase 57 180 1.5E-22 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS07585 40efa0e03b53d688026d092e8349e485 583 Gene3D G3DSA:3.60.110.10 5 250 4.8E-55 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NHAM_RS07585 40efa0e03b53d688026d092e8349e485 583 Gene3D G3DSA:3.40.50.620 275 539 8.0E-73 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS07585 40efa0e03b53d688026d092e8349e485 583 Pfam PF00795 Carbon-nitrogen hydrolase 8 250 6.0E-24 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NHAM_RS07585 40efa0e03b53d688026d092e8349e485 583 PANTHER PTHR23090 3 555 7.0E-143 T 22-04-2016 NHAM_RS07585 40efa0e03b53d688026d092e8349e485 583 TIGRFAM TIGR00552 nadE: NAD+ synthetase 282 538 1.8E-57 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 NHAM_RS07585 40efa0e03b53d688026d092e8349e485 583 SUPERFAMILY SSF52402 274 541 2.12E-75 T 22-04-2016 NHAM_RS07585 40efa0e03b53d688026d092e8349e485 583 SUPERFAMILY SSF56317 4 250 7.06E-58 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NHAM_RS07585 40efa0e03b53d688026d092e8349e485 583 Pfam PF02540 NAD synthase 277 532 1.8E-71 T 22-04-2016 IPR022310 NAD/GMP synthase NHAM_RS04670 59b6181ffeb4ae851a72be5fb9fade04 449 Gene3D G3DSA:2.40.50.100 54 87 2.2E-13 T 22-04-2016 NHAM_RS04670 59b6181ffeb4ae851a72be5fb9fade04 449 Gene3D G3DSA:2.40.50.100 232 256 2.2E-13 T 22-04-2016 NHAM_RS04670 59b6181ffeb4ae851a72be5fb9fade04 449 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 344 8.6E-19 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS04670 59b6181ffeb4ae851a72be5fb9fade04 449 SUPERFAMILY SSF111369 43 133 3.92E-9 T 22-04-2016 NHAM_RS04670 59b6181ffeb4ae851a72be5fb9fade04 449 PANTHER PTHR30572 2 137 1.4E-83 T 22-04-2016 NHAM_RS04670 59b6181ffeb4ae851a72be5fb9fade04 449 PANTHER PTHR30572 197 367 1.4E-83 T 22-04-2016 NHAM_RS04670 59b6181ffeb4ae851a72be5fb9fade04 449 PANTHER PTHR30572:SF1 2 137 1.4E-83 T 22-04-2016 NHAM_RS04670 59b6181ffeb4ae851a72be5fb9fade04 449 PANTHER PTHR30572:SF1 197 367 1.4E-83 T 22-04-2016 NHAM_RS04670 59b6181ffeb4ae851a72be5fb9fade04 449 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 196 432 3.0E-29 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS04670 59b6181ffeb4ae851a72be5fb9fade04 449 SUPERFAMILY SSF111369 175 348 1.83E-12 T 22-04-2016 NHAM_RS13255 77165ea6cef8a4602cbcdd88c2e4c4b0 168 PANTHER PTHR39563 8 166 1.9E-56 T 22-04-2016 NHAM_RS13255 77165ea6cef8a4602cbcdd88c2e4c4b0 168 Gene3D G3DSA:3.40.50.2020 12 156 1.1E-42 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS13255 77165ea6cef8a4602cbcdd88c2e4c4b0 168 SUPERFAMILY SSF53271 11 155 4.04E-30 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS13255 77165ea6cef8a4602cbcdd88c2e4c4b0 168 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 7 167 40.411 T 22-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 NHAM_RS13255 77165ea6cef8a4602cbcdd88c2e4c4b0 168 Pfam PF00156 Phosphoribosyl transferase domain 14 159 5.2E-17 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NHAM_RS09515 934aa8b86dfc79bb3acc1620f234ddf8 313 PANTHER PTHR30349 35 293 9.8E-18 T 22-04-2016 NHAM_RS09515 934aa8b86dfc79bb3acc1620f234ddf8 313 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 42 114 2.3E-7 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 NHAM_RS09515 934aa8b86dfc79bb3acc1620f234ddf8 313 Gene3D G3DSA:1.10.150.130 38 116 6.4E-10 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS09515 934aa8b86dfc79bb3acc1620f234ddf8 313 SUPERFAMILY SSF56349 35 293 1.12E-20 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS09515 934aa8b86dfc79bb3acc1620f234ddf8 313 Gene3D G3DSA:1.10.443.10 143 310 4.1E-19 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS09515 934aa8b86dfc79bb3acc1620f234ddf8 313 Pfam PF00589 Phage integrase family 159 295 5.4E-12 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS12475 69e3a1e452a653210f221c2ebb75058f 99 Pfam PF12096 Protein of unknown function (DUF3572) 10 91 8.5E-34 T 22-04-2016 IPR021955 Protein of unknown function DUF3572 NHAM_RS11965 d8e32117d3cab4a46a7874e7121663a2 219 PANTHER PTHR23117:SF13 11 218 8.2E-86 T 22-04-2016 NHAM_RS11965 d8e32117d3cab4a46a7874e7121663a2 219 SUPERFAMILY SSF52540 13 199 1.43E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11965 d8e32117d3cab4a46a7874e7121663a2 219 SMART SM00072 14 197 4.6E-59 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit NHAM_RS11965 d8e32117d3cab4a46a7874e7121663a2 219 ProSitePatterns PS00856 Guanylate kinase-like signature. 49 66 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 NHAM_RS11965 d8e32117d3cab4a46a7874e7121663a2 219 Pfam PF00625 Guanylate kinase 18 196 1.4E-46 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit NHAM_RS11965 d8e32117d3cab4a46a7874e7121663a2 219 PANTHER PTHR23117 11 218 8.2E-86 T 22-04-2016 NHAM_RS11965 d8e32117d3cab4a46a7874e7121663a2 219 Gene3D G3DSA:3.30.63.10 45 96 8.7E-25 T 22-04-2016 NHAM_RS11965 d8e32117d3cab4a46a7874e7121663a2 219 Hamap MF_00328 Guanylate kinase [gmk]. 13 197 35.796 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 NHAM_RS11965 d8e32117d3cab4a46a7874e7121663a2 219 Gene3D G3DSA:3.40.50.300 97 207 2.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11965 d8e32117d3cab4a46a7874e7121663a2 219 Gene3D G3DSA:3.40.50.300 13 37 2.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11965 d8e32117d3cab4a46a7874e7121663a2 219 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 16 194 1.3E-69 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 NHAM_RS16630 7c8c3eba0bcfd221debb2cc76d73b55f 295 PIRSF PIRSF000166 1 295 4.2E-108 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS16630 7c8c3eba0bcfd221debb2cc76d73b55f 295 Gene3D G3DSA:3.40.1500.10 5 294 1.5E-107 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS16630 7c8c3eba0bcfd221debb2cc76d73b55f 295 SUPERFAMILY SSF102886 3 295 4.97E-109 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS16630 7c8c3eba0bcfd221debb2cc76d73b55f 295 Pfam PF01218 Coproporphyrinogen III oxidase 14 294 1.3E-83 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS16630 7c8c3eba0bcfd221debb2cc76d73b55f 295 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 184 208 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS16630 7c8c3eba0bcfd221debb2cc76d73b55f 295 PRINTS PR00073 Coprogen oxidase signature 280 295 5.96E-43 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS16630 7c8c3eba0bcfd221debb2cc76d73b55f 295 PRINTS PR00073 Coprogen oxidase signature 45 61 5.96E-43 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS16630 7c8c3eba0bcfd221debb2cc76d73b55f 295 PRINTS PR00073 Coprogen oxidase signature 180 209 5.96E-43 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS16630 7c8c3eba0bcfd221debb2cc76d73b55f 295 PRINTS PR00073 Coprogen oxidase signature 108 132 5.96E-43 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS16630 7c8c3eba0bcfd221debb2cc76d73b55f 295 PRINTS PR00073 Coprogen oxidase signature 252 279 5.96E-43 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS16630 7c8c3eba0bcfd221debb2cc76d73b55f 295 PANTHER PTHR10755 1 294 1.8E-118 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS16630 7c8c3eba0bcfd221debb2cc76d73b55f 295 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 7 295 50.87 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 NHAM_RS07975 80df8d2a057c4a07315d0e6b6d705368 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.296 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid NHAM_RS07975 80df8d2a057c4a07315d0e6b6d705368 101 PANTHER PTHR19836 1 101 7.4E-50 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07975 80df8d2a057c4a07315d0e6b6d705368 101 SUPERFAMILY SSF57716 2 101 6.65E-33 T 22-04-2016 NHAM_RS07975 80df8d2a057c4a07315d0e6b6d705368 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.2E-22 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07975 80df8d2a057c4a07315d0e6b6d705368 101 Gene3D G3DSA:4.10.830.10 41 101 3.6E-28 T 22-04-2016 NHAM_RS06735 04ff57dba406065e415e767a7f6cf09e 106 PRINTS PR00355 Adrenodoxin signature 82 90 1.7E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 NHAM_RS06735 04ff57dba406065e415e767a7f6cf09e 106 PRINTS PR00355 Adrenodoxin signature 40 50 1.7E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 NHAM_RS06735 04ff57dba406065e415e767a7f6cf09e 106 PRINTS PR00355 Adrenodoxin signature 59 73 1.7E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 NHAM_RS06735 04ff57dba406065e415e767a7f6cf09e 106 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 40 50 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 NHAM_RS06735 04ff57dba406065e415e767a7f6cf09e 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 90 3.1E-17 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS06735 04ff57dba406065e415e767a7f6cf09e 106 SUPERFAMILY SSF54292 3 104 1.24E-34 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS06735 04ff57dba406065e415e767a7f6cf09e 106 Gene3D G3DSA:3.10.20.30 1 102 7.7E-41 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS06735 04ff57dba406065e415e767a7f6cf09e 106 PANTHER PTHR23426 3 103 2.8E-33 T 22-04-2016 NHAM_RS14915 c70584986a74e0237d6e6a49f80c0545 401 Gene3D G3DSA:1.10.530.10 73 129 4.3E-44 T 22-04-2016 NHAM_RS14915 c70584986a74e0237d6e6a49f80c0545 401 Gene3D G3DSA:1.10.530.10 210 325 4.3E-44 T 22-04-2016 NHAM_RS14915 c70584986a74e0237d6e6a49f80c0545 401 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 20 325 2.9E-105 T 22-04-2016 IPR011970 Lytic murein transglycosylase NHAM_RS14915 c70584986a74e0237d6e6a49f80c0545 401 SUPERFAMILY SSF53955 5 326 4.5E-86 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS14915 c70584986a74e0237d6e6a49f80c0545 401 SUPERFAMILY SSF47090 330 397 2.22E-12 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS14915 c70584986a74e0237d6e6a49f80c0545 401 Gene3D G3DSA:1.10.101.10 341 398 1.8E-9 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS14915 c70584986a74e0237d6e6a49f80c0545 401 Pfam PF13406 Transglycosylase SLT domain 20 322 1.9E-86 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 NHAM_RS14915 c70584986a74e0237d6e6a49f80c0545 401 PANTHER PTHR30163 18 397 1.5E-143 T 22-04-2016 IPR011757 Lytic transglycosylase MltB NHAM_RS14915 c70584986a74e0237d6e6a49f80c0545 401 PANTHER PTHR30163:SF2 18 397 1.5E-143 T 22-04-2016 NHAM_RS14915 c70584986a74e0237d6e6a49f80c0545 401 Pfam PF01471 Putative peptidoglycan binding domain 343 397 1.4E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS08620 801659fde0b6707dfe4ed70b7bcfc629 240 PANTHER PTHR32119 1 240 3.0E-79 T 22-04-2016 NHAM_RS08620 801659fde0b6707dfe4ed70b7bcfc629 240 SUPERFAMILY SSF51366 11 233 4.71E-62 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NHAM_RS08620 801659fde0b6707dfe4ed70b7bcfc629 240 SMART SM00934 13 229 1.4E-74 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS08620 801659fde0b6707dfe4ed70b7bcfc629 240 Gene3D G3DSA:3.20.20.70 11 233 1.4E-70 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS08620 801659fde0b6707dfe4ed70b7bcfc629 240 PANTHER PTHR32119:SF2 1 240 3.0E-79 T 22-04-2016 NHAM_RS08620 801659fde0b6707dfe4ed70b7bcfc629 240 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 14 229 2.8E-55 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS08620 801659fde0b6707dfe4ed70b7bcfc629 240 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 13 229 2.7E-40 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS08620 801659fde0b6707dfe4ed70b7bcfc629 240 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 11 234 32.763 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS19550 c3d3f64ed25dcc5bebdcef06026b11d4 116 Pfam PF05239 PRC-barrel domain 11 72 1.9E-9 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS19550 c3d3f64ed25dcc5bebdcef06026b11d4 116 Gene3D G3DSA:2.30.30.240 13 71 5.9E-11 T 22-04-2016 NHAM_RS19550 c3d3f64ed25dcc5bebdcef06026b11d4 116 SUPERFAMILY SSF50346 7 115 8.63E-24 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS19550 c3d3f64ed25dcc5bebdcef06026b11d4 116 PANTHER PTHR36505 7 114 3.8E-46 T 22-04-2016 NHAM_RS19550 c3d3f64ed25dcc5bebdcef06026b11d4 116 PANTHER PTHR36505:SF1 7 114 3.8E-46 T 22-04-2016 NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 10 235 2.1E-112 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 328 1.2E-136 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 328 3.8E-31 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 347 169.107 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 SMART SM00382 53 180 1.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 330 5.0E-39 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 Gene3D G3DSA:1.10.8.60 185 257 1.7E-28 T 22-04-2016 NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 PANTHER PTHR13779:SF25 11 334 3.3E-166 T 22-04-2016 NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 SUPERFAMILY SSF46785 259 332 4.49E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 PANTHER PTHR13779 11 334 3.3E-166 T 22-04-2016 NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 Gene3D G3DSA:1.10.10.10 259 329 1.9E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 SUPERFAMILY SSF52540 22 252 4.02E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18070 0a7b060463dcf57e5dd3131fb62a2bed 347 Gene3D G3DSA:3.40.50.300 23 179 2.8E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 Pfam PF01266 FAD dependent oxidoreductase 7 398 8.1E-56 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 SUPERFAMILY SSF51905 112 271 5.76E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 SUPERFAMILY SSF51905 359 416 5.76E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 SUPERFAMILY SSF51905 6 61 5.76E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 PANTHER PTHR13847:SF216 8 65 2.0E-95 T 22-04-2016 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 PANTHER PTHR13847:SF216 112 416 2.0E-95 T 22-04-2016 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 PANTHER PTHR13847 112 416 2.0E-95 T 22-04-2016 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 PANTHER PTHR13847 8 65 2.0E-95 T 22-04-2016 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 Gene3D G3DSA:3.50.50.60 113 135 3.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 Gene3D G3DSA:3.50.50.60 5 63 3.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 Gene3D G3DSA:3.50.50.60 193 266 3.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 Gene3D G3DSA:3.50.50.60 359 416 3.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 Gene3D G3DSA:3.30.9.10 267 342 1.3E-5 T 22-04-2016 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 Gene3D G3DSA:3.30.9.10 139 192 1.3E-5 T 22-04-2016 NHAM_RS13825 e9c7b79fe060837bbf55e36ff1134a40 417 SUPERFAMILY SSF54373 275 359 9.81E-10 T 22-04-2016 NHAM_RS01520 f5eb04e51dbd8dcd695b3cf83f4e0d7a 1123 Gene3D G3DSA:2.60.260.20 1040 1090 4.7E-4 T 22-04-2016 NHAM_RS01520 f5eb04e51dbd8dcd695b3cf83f4e0d7a 1123 SUPERFAMILY SSF49493 1040 1107 5.23E-6 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NHAM_RS01520 f5eb04e51dbd8dcd695b3cf83f4e0d7a 1123 Gene3D G3DSA:3.40.50.300 826 949 1.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01520 f5eb04e51dbd8dcd695b3cf83f4e0d7a 1123 Gene3D G3DSA:3.40.50.300 624 702 1.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01520 f5eb04e51dbd8dcd695b3cf83f4e0d7a 1123 SUPERFAMILY SSF47090 109 150 5.97E-5 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS01520 f5eb04e51dbd8dcd695b3cf83f4e0d7a 1123 SUPERFAMILY SSF52540 616 952 4.43E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00095 f668b87bf3ebe64acfb8e67b7c08361a 149 Pfam PF01475 Ferric uptake regulator family 22 140 9.8E-41 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 NHAM_RS00095 f668b87bf3ebe64acfb8e67b7c08361a 149 SUPERFAMILY SSF46785 15 141 9.73E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS00095 f668b87bf3ebe64acfb8e67b7c08361a 149 Gene3D G3DSA:1.10.10.10 14 92 2.0E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS00095 f668b87bf3ebe64acfb8e67b7c08361a 149 PANTHER PTHR33202 15 140 2.1E-35 T 22-04-2016 NHAM_RS05070 b04674fdb37f60553b25d348bfc9213d 382 Gene3D G3DSA:2.40.50.100 166 198 3.9E-18 T 22-04-2016 NHAM_RS05070 b04674fdb37f60553b25d348bfc9213d 382 Gene3D G3DSA:2.40.50.100 58 91 3.9E-18 T 22-04-2016 NHAM_RS05070 b04674fdb37f60553b25d348bfc9213d 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 371 1.4E-70 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS05070 b04674fdb37f60553b25d348bfc9213d 382 SUPERFAMILY SSF111369 46 272 1.57E-58 T 22-04-2016 NHAM_RS05070 b04674fdb37f60553b25d348bfc9213d 382 PANTHER PTHR30158 31 376 3.1E-118 T 22-04-2016 NHAM_RS05070 b04674fdb37f60553b25d348bfc9213d 382 PANTHER PTHR30158:SF3 31 376 3.1E-118 T 22-04-2016 NHAM_RS05070 b04674fdb37f60553b25d348bfc9213d 382 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 272 5.1E-9 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS19375 e565f4879bc33b1278394035185b9d3e 254 PANTHER PTHR37844 1 253 6.8E-27 T 22-04-2016 NHAM_RS19375 e565f4879bc33b1278394035185b9d3e 254 Gene3D G3DSA:3.60.21.10 1 237 3.3E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS19375 e565f4879bc33b1278394035185b9d3e 254 Pfam PF00149 Calcineurin-like phosphoesterase 5 219 7.1E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NHAM_RS19375 e565f4879bc33b1278394035185b9d3e 254 SUPERFAMILY SSF56300 147 252 1.32E-25 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS19375 e565f4879bc33b1278394035185b9d3e 254 SUPERFAMILY SSF56300 1 109 1.32E-25 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS24015 32eebe17f68cc54f0e2ade705a142dac 582 Pfam PF12571 Phage tail-collar fibre protein 1 137 5.0E-20 T 22-04-2016 IPR022225 Phage tail fibre protein NHAM_RS24015 32eebe17f68cc54f0e2ade705a142dac 582 Pfam PF10983 Protein of unknown function (DUF2793) 137 204 7.5E-13 T 22-04-2016 IPR021251 Protein of unknown function DUF2793 NHAM_RS14080 74fdcb722b6d6d03e9bf5fa1169b9e16 311 Pfam PF01609 Transposase DDE domain 134 300 1.1E-26 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS14080 74fdcb722b6d6d03e9bf5fa1169b9e16 311 PANTHER PTHR35604 4 300 2.0E-33 T 22-04-2016 NHAM_RS14080 74fdcb722b6d6d03e9bf5fa1169b9e16 311 Pfam PF05598 Transposase domain (DUF772) 48 121 1.0E-17 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS18580 4bf0546bc395abd1d918a5ee5667a491 673 PRINTS PR01217 Proline rich extensin signature 96 113 2.6E-9 T 22-04-2016 NHAM_RS18580 4bf0546bc395abd1d918a5ee5667a491 673 PRINTS PR01217 Proline rich extensin signature 79 95 2.6E-9 T 22-04-2016 NHAM_RS18580 4bf0546bc395abd1d918a5ee5667a491 673 PRINTS PR01217 Proline rich extensin signature 58 79 2.6E-9 T 22-04-2016 NHAM_RS18580 4bf0546bc395abd1d918a5ee5667a491 673 PRINTS PR01217 Proline rich extensin signature 114 139 2.6E-9 T 22-04-2016 NHAM_RS18580 4bf0546bc395abd1d918a5ee5667a491 673 Gene3D G3DSA:3.30.1330.60 548 654 3.0E-24 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS18580 4bf0546bc395abd1d918a5ee5667a491 673 PANTHER PTHR30128 537 670 6.2E-23 T 22-04-2016 NHAM_RS18580 4bf0546bc395abd1d918a5ee5667a491 673 Pfam PF00691 OmpA family 551 648 5.5E-16 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS18580 4bf0546bc395abd1d918a5ee5667a491 673 SUPERFAMILY SSF103088 547 654 1.09E-21 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS05065 15b63702dac26d871f0856ebc3bc83fc 307 PANTHER PTHR10060:SF18 1 261 4.7E-62 T 22-04-2016 NHAM_RS05065 15b63702dac26d871f0856ebc3bc83fc 307 SUPERFAMILY SSF51556 4 258 8.98E-57 T 22-04-2016 IPR032466 Metal-dependent hydrolase NHAM_RS05065 15b63702dac26d871f0856ebc3bc83fc 307 ProDom PD038341 HYDROLASE COFACTOR MOLYBDENUM BIOSYNTHESIS METAL-DEPENDENT DEOXYRIBONUCLEASE PREDICTED TATD-RELATED TVG0313409 A 125 262 0.003 T 22-04-2016 NHAM_RS05065 15b63702dac26d871f0856ebc3bc83fc 307 Pfam PF01026 TatD related DNase 5 257 1.3E-17 T 22-04-2016 IPR001130 TatD family GO:0016788 NHAM_RS05065 15b63702dac26d871f0856ebc3bc83fc 307 Gene3D G3DSA:3.20.20.140 7 257 1.5E-36 T 22-04-2016 NHAM_RS05065 15b63702dac26d871f0856ebc3bc83fc 307 PIRSF PIRSF005295 3 261 3.4E-101 T 22-04-2016 IPR012022 Protein of unknown function UCP005295 NHAM_RS05065 15b63702dac26d871f0856ebc3bc83fc 307 PANTHER PTHR10060 1 261 4.7E-62 T 22-04-2016 IPR001130 TatD family GO:0016788 NHAM_RS10050 b751507731bc69f4c7c934058bb7be1d 262 Gene3D G3DSA:1.20.120.330 20 91 1.2E-5 T 22-04-2016 NHAM_RS10050 b751507731bc69f4c7c934058bb7be1d 262 Pfam PF05168 HEPN domain 18 93 2.2E-4 T 22-04-2016 IPR007842 HEPN domain NHAM_RS17035 41102f7beb11025f909f2571c3ef4d75 70 Pfam PF05489 Phage Tail Protein X 3 57 2.6E-21 T 22-04-2016 IPR008861 Phage Tail Protein X-like NHAM_RS02115 b1187f26dfc7ca485b6d7cba73eaeadc 120 SUPERFAMILY SSF81585 49 115 8.5E-14 T 22-04-2016 NHAM_RS02115 b1187f26dfc7ca485b6d7cba73eaeadc 120 Gene3D G3DSA:1.10.150.320 50 114 5.5E-12 T 22-04-2016 NHAM_RS02115 b1187f26dfc7ca485b6d7cba73eaeadc 120 Pfam PF12836 Helix-hairpin-helix motif 57 114 1.1E-12 T 22-04-2016 NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 PANTHER PTHR10724 3 731 0.0 T 22-04-2016 NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 SUPERFAMILY SSF47781 560 631 1.69E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 SUPERFAMILY SSF50249 637 723 7.46E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 PANTHER PTHR10724:SF1 3 731 0.0 T 22-04-2016 NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 Pfam PF16921 Tex protein YqgF-like domain 326 451 2.1E-50 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 SUPERFAMILY SSF158832 3 320 5.36E-114 T 22-04-2016 NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 Pfam PF00575 S1 RNA binding domain 649 720 2.9E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 Gene3D G3DSA:1.10.3500.10 451 497 3.2E-98 T 22-04-2016 IPR023323 Tex-like domain NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 Gene3D G3DSA:1.10.3500.10 109 321 3.2E-98 T 22-04-2016 IPR023323 Tex-like domain NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 Gene3D G3DSA:3.30.420.140 325 450 7.7E-49 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 Gene3D G3DSA:1.10.10.650 3 108 5.9E-43 T 22-04-2016 IPR023319 Tex-like protein, HTH domain NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 Gene3D G3DSA:2.40.50.140 634 720 4.6E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 Pfam PF09371 Tex-like protein N-terminal domain 8 191 1.2E-65 T 22-04-2016 IPR018974 Tex-like protein, N-terminal NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 SMART SM00316 649 720 9.2E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 Gene3D G3DSA:1.10.150.310 499 630 2.2E-43 T 22-04-2016 IPR023097 Tex RuvX-like domain NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 Pfam PF12836 Helix-hairpin-helix motif 491 555 9.8E-27 T 22-04-2016 NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 SMART SM00732 325 424 1.8E-33 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 SUPERFAMILY SSF53098 321 469 4.32E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS05295 68b2dee4c68644b6609c4dd9522e1be4 778 SUPERFAMILY SSF47781 470 557 3.56E-26 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NHAM_RS09295 cac5a75161744c25cfea8f4dc1e7fbb1 202 Gene3D G3DSA:2.40.30.20 5 110 9.7E-26 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS09295 cac5a75161744c25cfea8f4dc1e7fbb1 202 Gene3D G3DSA:2.40.30.20 111 200 9.7E-28 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NHAM_RS09295 cac5a75161744c25cfea8f4dc1e7fbb1 202 SUPERFAMILY SSF63380 1 98 2.55E-21 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NHAM_RS09295 cac5a75161744c25cfea8f4dc1e7fbb1 202 Pfam PF00677 Lumazine binding domain 3 92 2.7E-19 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS09295 cac5a75161744c25cfea8f4dc1e7fbb1 202 Pfam PF00677 Lumazine binding domain 106 189 2.9E-18 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS09295 cac5a75161744c25cfea8f4dc1e7fbb1 202 PANTHER PTHR21098 1 198 1.1E-80 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS09295 cac5a75161744c25cfea8f4dc1e7fbb1 202 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 2.4E-51 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS09295 cac5a75161744c25cfea8f4dc1e7fbb1 202 SUPERFAMILY SSF63380 98 199 3.23E-29 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NHAM_RS09295 cac5a75161744c25cfea8f4dc1e7fbb1 202 PIRSF PIRSF000498 1 202 2.3E-67 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS15555 37c460995591505a382047151e5a6a13 504 SUPERFAMILY SSF53335 275 451 5.16E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS15555 37c460995591505a382047151e5a6a13 504 Pfam PF13489 Methyltransferase domain 293 442 1.1E-10 T 22-04-2016 NHAM_RS15555 37c460995591505a382047151e5a6a13 504 Gene3D G3DSA:3.40.50.150 277 445 4.3E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS02900 0a9744010fbd8b689f55c86e1226dba4 137 SUPERFAMILY SSF88697 1 136 1.08E-52 T 22-04-2016 IPR015947 PUA-like domain NHAM_RS02900 0a9744010fbd8b689f55c86e1226dba4 137 PANTHER PTHR14087 1 136 7.1E-61 T 22-04-2016 NHAM_RS02900 0a9744010fbd8b689f55c86e1226dba4 137 Pfam PF01878 EVE domain 2 134 5.8E-44 T 22-04-2016 IPR002740 EVE domain NHAM_RS02900 0a9744010fbd8b689f55c86e1226dba4 137 Gene3D G3DSA:3.10.590.10 1 134 1.0E-26 T 22-04-2016 IPR002740 EVE domain NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 PANTHER PTHR30519 1 107 0.0 T 22-04-2016 NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 PANTHER PTHR30519:SF0 127 778 0.0 T 22-04-2016 NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 PANTHER PTHR30519 127 778 0.0 T 22-04-2016 NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 11 778 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 SUPERFAMILY SSF51726 10 416 2.62E-111 T 22-04-2016 NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 6 778 36.375 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 PIRSF PIRSF000382 5 778 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 PANTHER PTHR30519:SF0 1 107 0.0 T 22-04-2016 NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 Gene3D G3DSA:3.20.20.210 10 412 5.9E-144 T 22-04-2016 NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 SUPERFAMILY SSF51726 418 777 1.31E-118 T 22-04-2016 NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 Gene3D G3DSA:3.20.20.210 414 777 2.3E-130 T 22-04-2016 NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 453 775 1.7E-150 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 NHAM_RS18780 6e0ca013d3e94669a8223a764aaf6537 778 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 9 334 6.2E-115 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 NHAM_RS02135 ed92e8453e835e548a88fb044fb73c07 204 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS02135 ed92e8453e835e548a88fb044fb73c07 204 SUPERFAMILY SSF52540 6 189 2.92E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02135 ed92e8453e835e548a88fb044fb73c07 204 Gene3D G3DSA:3.40.50.300 6 189 1.2E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02135 ed92e8453e835e548a88fb044fb73c07 204 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 3 199 1.2E-67 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 NHAM_RS02135 ed92e8453e835e548a88fb044fb73c07 204 Pfam PF00005 ABC transporter 21 159 4.0E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS02135 ed92e8453e835e548a88fb044fb73c07 204 PANTHER PTHR24220:SF508 4 193 4.6E-74 T 22-04-2016 NHAM_RS02135 ed92e8453e835e548a88fb044fb73c07 204 SMART SM00382 27 204 5.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS02135 ed92e8453e835e548a88fb044fb73c07 204 PANTHER PTHR24220 4 193 4.6E-74 T 22-04-2016 NHAM_RS09170 d185a0d6fb7bef8f29b2210024f9df06 126 SMART SM00448 9 116 1.2E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS09170 d185a0d6fb7bef8f29b2210024f9df06 126 Pfam PF00072 Response regulator receiver domain 11 65 1.6E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS09170 d185a0d6fb7bef8f29b2210024f9df06 126 PANTHER PTHR26402 9 125 4.5E-12 T 22-04-2016 NHAM_RS09170 d185a0d6fb7bef8f29b2210024f9df06 126 SUPERFAMILY SSF52172 8 121 1.42E-20 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS09170 d185a0d6fb7bef8f29b2210024f9df06 126 Gene3D G3DSA:3.40.50.2300 8 122 5.5E-18 T 22-04-2016 NHAM_RS16810 141c22ebc08de661b76c420804c59919 316 SUPERFAMILY SSF49503 155 311 2.01E-35 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS16810 141c22ebc08de661b76c420804c59919 316 PANTHER PTHR11709 14 174 1.3E-23 T 22-04-2016 NHAM_RS16810 141c22ebc08de661b76c420804c59919 316 Gene3D G3DSA:2.60.40.420 159 313 2.2E-24 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS16810 141c22ebc08de661b76c420804c59919 316 PRINTS PR00695 Copper containing nitrite reductase signature 31 49 5.6E-16 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 NHAM_RS16810 141c22ebc08de661b76c420804c59919 316 PRINTS PR00695 Copper containing nitrite reductase signature 134 150 5.6E-16 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 NHAM_RS16810 141c22ebc08de661b76c420804c59919 316 PRINTS PR00695 Copper containing nitrite reductase signature 58 74 5.6E-16 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 NHAM_RS16810 141c22ebc08de661b76c420804c59919 316 PRINTS PR00695 Copper containing nitrite reductase signature 117 132 5.6E-16 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 NHAM_RS16810 141c22ebc08de661b76c420804c59919 316 PRINTS PR00695 Copper containing nitrite reductase signature 76 93 5.6E-16 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 NHAM_RS16810 141c22ebc08de661b76c420804c59919 316 Gene3D G3DSA:2.60.40.420 27 150 2.4E-29 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS16810 141c22ebc08de661b76c420804c59919 316 SUPERFAMILY SSF49503 28 168 2.99E-33 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS16810 141c22ebc08de661b76c420804c59919 316 PANTHER PTHR11709:SF84 14 174 1.3E-23 T 22-04-2016 NHAM_RS16810 141c22ebc08de661b76c420804c59919 316 Pfam PF07732 Multicopper oxidase 50 152 2.8E-14 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 NHAM_RS07825 982f7b8d377fad7096ccf8e620124b0b 230 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 225 1.0E-99 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 NHAM_RS07825 982f7b8d377fad7096ccf8e620124b0b 230 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 228 42.894 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 NHAM_RS07825 982f7b8d377fad7096ccf8e620124b0b 230 PANTHER PTHR23105 19 223 5.3E-81 T 22-04-2016 NHAM_RS07825 982f7b8d377fad7096ccf8e620124b0b 230 ProSitePatterns PS01199 Ribosomal protein L1 signature. 119 138 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site NHAM_RS07825 982f7b8d377fad7096ccf8e620124b0b 230 Gene3D G3DSA:3.40.50.790 68 158 4.0E-39 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich NHAM_RS07825 982f7b8d377fad7096ccf8e620124b0b 230 PIRSF PIRSF002155 1 225 3.6E-76 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 NHAM_RS07825 982f7b8d377fad7096ccf8e620124b0b 230 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.0E-52 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein NHAM_RS07825 982f7b8d377fad7096ccf8e620124b0b 230 PANTHER PTHR23105:SF51 19 223 5.3E-81 T 22-04-2016 NHAM_RS07825 982f7b8d377fad7096ccf8e620124b0b 230 Gene3D G3DSA:3.30.190.20 15 67 4.4E-47 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 NHAM_RS07825 982f7b8d377fad7096ccf8e620124b0b 230 Gene3D G3DSA:3.30.190.20 160 224 4.4E-47 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 NHAM_RS07825 982f7b8d377fad7096ccf8e620124b0b 230 SUPERFAMILY SSF56808 5 224 5.36E-82 T 22-04-2016 IPR023674 Ribosomal protein L1-like NHAM_RS04445 5c6411ea8782f4bd4fb623a9263b9f08 289 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 9 87 3.6E-15 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 NHAM_RS04445 5c6411ea8782f4bd4fb623a9263b9f08 289 PANTHER PTHR30349 11 279 3.0E-66 T 22-04-2016 NHAM_RS04445 5c6411ea8782f4bd4fb623a9263b9f08 289 Gene3D G3DSA:1.10.150.130 16 95 6.8E-7 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS04445 5c6411ea8782f4bd4fb623a9263b9f08 289 PANTHER PTHR30349:SF5 11 279 3.0E-66 T 22-04-2016 NHAM_RS04445 5c6411ea8782f4bd4fb623a9263b9f08 289 Gene3D G3DSA:1.10.443.10 106 274 4.8E-48 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS04445 5c6411ea8782f4bd4fb623a9263b9f08 289 SUPERFAMILY SSF56349 11 274 2.85E-54 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS04445 5c6411ea8782f4bd4fb623a9263b9f08 289 Pfam PF00589 Phage integrase family 106 266 2.8E-41 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS14430 ed41db62098781f6bf93bbf63648979a 97 Pfam PF07876 Stress responsive A/B Barrel Domain 2 94 1.2E-20 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel NHAM_RS14430 ed41db62098781f6bf93bbf63648979a 97 SMART SM00886 2 94 2.2E-21 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel NHAM_RS14430 ed41db62098781f6bf93bbf63648979a 97 SUPERFAMILY SSF54909 1 94 1.57E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel NHAM_RS14430 ed41db62098781f6bf93bbf63648979a 97 Gene3D G3DSA:3.30.70.900 1 93 4.3E-21 T 22-04-2016 NHAM_RS06090 52fe17d269fff1d95dfd95efbbb04ee3 333 PANTHER PTHR10366:SF360 6 263 6.3E-107 T 22-04-2016 NHAM_RS06090 52fe17d269fff1d95dfd95efbbb04ee3 333 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 2 327 9.2E-154 T 22-04-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 NHAM_RS06090 52fe17d269fff1d95dfd95efbbb04ee3 333 Gene3D G3DSA:3.40.50.720 3 245 7.4E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06090 52fe17d269fff1d95dfd95efbbb04ee3 333 SUPERFAMILY SSF51735 4 260 1.01E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06090 52fe17d269fff1d95dfd95efbbb04ee3 333 Pfam PF02719 Polysaccharide biosynthesis protein 7 280 1.6E-92 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain NHAM_RS06090 52fe17d269fff1d95dfd95efbbb04ee3 333 PANTHER PTHR10366 6 263 6.3E-107 T 22-04-2016 NHAM_RS03785 46f14a4188c0311c017393efb671941a 225 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 158 218 1.0E-9 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 NHAM_RS03785 46f14a4188c0311c017393efb671941a 225 SUPERFAMILY SSF74653 138 221 4.45E-13 T 22-04-2016 NHAM_RS03785 46f14a4188c0311c017393efb671941a 225 Gene3D G3DSA:3.30.1150.10 117 222 8.0E-17 T 22-04-2016 NHAM_RS03785 46f14a4188c0311c017393efb671941a 225 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 157 223 4.6E-12 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 NHAM_RS12045 0c7418757568ea2f09dcfe18bf5689a1 175 SUPERFAMILY SSF54060 11 116 1.18E-20 T 22-04-2016 NHAM_RS12045 0c7418757568ea2f09dcfe18bf5689a1 175 Pfam PF13392 HNH endonuclease 67 109 8.3E-16 T 22-04-2016 IPR003615 HNH nuclease NHAM_RS12045 0c7418757568ea2f09dcfe18bf5689a1 175 SUPERFAMILY SSF54171 121 173 4.9E-8 T 22-04-2016 IPR016177 DNA-binding domain GO:0003677 NHAM_RS18415 9ce2f9f8cbaee6df8cced2b3cedb378e 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 42.254 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18415 9ce2f9f8cbaee6df8cced2b3cedb378e 201 SUPERFAMILY SSF52016 1 194 3.73E-60 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NHAM_RS18415 9ce2f9f8cbaee6df8cced2b3cedb378e 201 PANTHER PTHR11670 1 199 3.9E-146 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18415 9ce2f9f8cbaee6df8cced2b3cedb378e 201 Pfam PF00694 Aconitase C-terminal domain 1 123 5.0E-39 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18415 9ce2f9f8cbaee6df8cced2b3cedb378e 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 187 7.9E-79 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 NHAM_RS18415 9ce2f9f8cbaee6df8cced2b3cedb378e 201 PANTHER PTHR11670:SF12 1 199 3.9E-146 T 22-04-2016 NHAM_RS18415 9ce2f9f8cbaee6df8cced2b3cedb378e 201 Gene3D G3DSA:3.20.19.10 1 193 7.3E-50 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NHAM_RS00575 0976c91993116102588bf47f5d57d2e4 239 PANTHER PTHR30231:SF0 1 168 4.8E-86 T 22-04-2016 NHAM_RS00575 0976c91993116102588bf47f5d57d2e4 239 Pfam PF00929 Exonuclease 4 163 1.1E-32 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III NHAM_RS00575 0976c91993116102588bf47f5d57d2e4 239 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 225 1.0E-79 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS00575 0976c91993116102588bf47f5d57d2e4 239 SUPERFAMILY SSF53098 1 171 5.28E-53 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS00575 0976c91993116102588bf47f5d57d2e4 239 SMART SM00479 2 172 1.7E-41 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III NHAM_RS00575 0976c91993116102588bf47f5d57d2e4 239 PANTHER PTHR30231 1 168 4.8E-86 T 22-04-2016 NHAM_RS00575 0976c91993116102588bf47f5d57d2e4 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 170 4.4E-49 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS00575 0976c91993116102588bf47f5d57d2e4 239 Gene3D G3DSA:3.30.420.10 1 173 4.2E-63 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 24 901 1.9E-239 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 SUPERFAMILY SSF50677 221 443 1.99E-38 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 581 594 3.7E-25 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 441 456 3.7E-25 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 247 270 3.7E-25 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 60 71 3.7E-25 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 37 706 2.9E-178 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 67 78 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 SUPERFAMILY SSF52374 443 714 2.62E-124 T 22-04-2016 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 SUPERFAMILY SSF52374 13 219 2.62E-124 T 22-04-2016 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 PANTHER PTHR11946 302 937 0.0 T 22-04-2016 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 PANTHER PTHR11946 15 268 0.0 T 22-04-2016 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 SUPERFAMILY SSF47323 718 991 1.64E-55 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 Gene3D G3DSA:3.90.740.10 223 429 3.4E-45 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 PANTHER PTHR11946:SF11 302 937 0.0 T 22-04-2016 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 PANTHER PTHR11946:SF11 15 268 0.0 T 22-04-2016 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 Pfam PF08264 Anticodon-binding domain of tRNA 751 901 6.4E-21 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 Gene3D G3DSA:1.10.730.10 709 889 2.4E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 Gene3D G3DSA:3.40.50.620 446 703 3.1E-129 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 Gene3D G3DSA:3.40.50.620 22 217 3.1E-129 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS16215 99e51665e6d57fbfab549dad889dccf0 999 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 11 990 19.539 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 SUPERFAMILY SSF81442 43 555 6.93E-150 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 Gene3D G3DSA:1.20.210.10 40 582 2.6E-162 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PANTHER PTHR10422 33 610 6.8E-287 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 346 367 3.4E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 123 147 3.4E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 322 337 3.4E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 3.4E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 407 426 3.4E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 226 245 3.4E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 3.4E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 177 3.4E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 276 297 3.4E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 119 3.4E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 457 478 3.4E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 215 3.4E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 PANTHER PTHR10422:SF26 33 610 6.8E-287 T 22-04-2016 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 278 332 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS17710 4803c1a089e775f7e475e63fa975cdd6 658 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 497 4.3E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS05970 53b3a30f5b85204cb10a5c5be40e2600 348 PANTHER PTHR19353 10 300 9.6E-117 T 22-04-2016 NHAM_RS05970 53b3a30f5b85204cb10a5c5be40e2600 348 PANTHER PTHR19353:SF27 10 300 9.6E-117 T 22-04-2016 NHAM_RS05970 53b3a30f5b85204cb10a5c5be40e2600 348 Pfam PF00487 Fatty acid desaturase 59 303 1.6E-30 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 NHAM_RS20690 72b83b5bc4b6ea59d3d81276a6001302 364 SUPERFAMILY SSF52172 5 128 1.96E-7 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS20690 72b83b5bc4b6ea59d3d81276a6001302 364 SUPERFAMILY SSF109604 180 350 9.26E-28 T 22-04-2016 NHAM_RS20690 72b83b5bc4b6ea59d3d81276a6001302 364 Gene3D G3DSA:3.40.50.2300 52 134 5.9E-5 T 22-04-2016 NHAM_RS20690 72b83b5bc4b6ea59d3d81276a6001302 364 Pfam PF01966 HD domain 201 321 1.1E-15 T 22-04-2016 IPR006674 HD domain NHAM_RS20690 72b83b5bc4b6ea59d3d81276a6001302 364 SMART SM00471 196 332 9.0E-7 T 22-04-2016 IPR003607 HD/PDEase domain NHAM_RS20690 72b83b5bc4b6ea59d3d81276a6001302 364 Gene3D G3DSA:1.10.3210.10 195 322 1.2E-20 T 22-04-2016 IPR006674 HD domain NHAM_RS20690 72b83b5bc4b6ea59d3d81276a6001302 364 TIGRFAM TIGR00277 HDIG: HDIG domain 199 291 1.8E-9 T 22-04-2016 IPR006675 HDIG domain NHAM_RS18570 742dea2d7ae760e370cefc69cc01d603 141 Gene3D G3DSA:3.40.33.10 29 129 1.4E-7 T 22-04-2016 IPR014044 CAP domain NHAM_RS18570 742dea2d7ae760e370cefc69cc01d603 141 PANTHER PTHR31157 28 138 5.1E-15 T 22-04-2016 NHAM_RS18570 742dea2d7ae760e370cefc69cc01d603 141 SUPERFAMILY SSF55797 27 128 2.27E-15 T 22-04-2016 IPR014044 CAP domain NHAM_RS18570 742dea2d7ae760e370cefc69cc01d603 141 Pfam PF00188 Cysteine-rich secretory protein family 29 131 2.2E-9 T 22-04-2016 IPR014044 CAP domain NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 PANTHER PTHR13789:SF5 4 401 1.5E-132 T 22-04-2016 NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 PANTHER PTHR13789 4 401 1.5E-132 T 22-04-2016 NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 Gene3D G3DSA:3.50.50.60 270 358 1.1E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 Gene3D G3DSA:3.50.50.60 5 184 1.1E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 Pfam PF01494 FAD binding domain 7 322 8.4E-31 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 SUPERFAMILY SSF51905 6 179 5.27E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 SUPERFAMILY SSF51905 269 387 5.27E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 392 5.3E-118 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 3.6E-16 T 22-04-2016 NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 3.6E-16 T 22-04-2016 NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 3.6E-16 T 22-04-2016 NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.6E-16 T 22-04-2016 NHAM_RS00440 1e2113a9ef9cb188680b9de5d44c0dbe 406 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 296 309 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 NHAM_RS01975 ebfbc2f340b2a7f6eaf571917a73541a 633 Gene3D G3DSA:3.10.105.10 335 590 1.1E-48 T 22-04-2016 NHAM_RS01975 ebfbc2f340b2a7f6eaf571917a73541a 633 PANTHER PTHR30290:SF2 46 384 1.1E-211 T 22-04-2016 NHAM_RS01975 ebfbc2f340b2a7f6eaf571917a73541a 633 PANTHER PTHR30290:SF2 409 632 1.1E-211 T 22-04-2016 NHAM_RS01975 ebfbc2f340b2a7f6eaf571917a73541a 633 PIRSF PIRSF002741 47 625 6.3E-91 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 NHAM_RS01975 ebfbc2f340b2a7f6eaf571917a73541a 633 Gene3D G3DSA:3.90.76.10 84 243 6.4E-31 T 22-04-2016 NHAM_RS01975 ebfbc2f340b2a7f6eaf571917a73541a 633 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 121 532 1.1E-72 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain NHAM_RS01975 ebfbc2f340b2a7f6eaf571917a73541a 633 PANTHER PTHR30290 409 632 1.1E-211 T 22-04-2016 NHAM_RS01975 ebfbc2f340b2a7f6eaf571917a73541a 633 PANTHER PTHR30290 46 384 1.1E-211 T 22-04-2016 NHAM_RS01975 ebfbc2f340b2a7f6eaf571917a73541a 633 SUPERFAMILY SSF53850 69 620 4.34E-118 T 22-04-2016 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 PANTHER PTHR30314:SF3 1 321 5.9E-170 T 22-04-2016 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 14 330 2.3E-118 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 TIGRFAM TIGR03483 FtsZ_alphas_C: cell division protein FtsZ, alphaProteobacterial C-terminal extension 474 607 5.4E-32 T 22-04-2016 IPR017844 Cell division protein FtsZ, C-terminal extension GO:0000910|GO:0005525|GO:0005737 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 SUPERFAMILY SSF55307 208 323 1.76E-41 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 SMART SM00865 210 328 7.7E-57 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 Gene3D G3DSA:3.40.50.1440 16 217 1.8E-89 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 PANTHER PTHR30314 1 321 5.9E-170 T 22-04-2016 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 367 36.822 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 177 4.7E-38 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 PRINTS PR00423 Cell division protein FtsZ signature 129 150 1.5E-48 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 PRINTS PR00423 Cell division protein FtsZ signature 101 121 1.5E-48 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 PRINTS PR00423 Cell division protein FtsZ signature 215 236 1.5E-48 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 PRINTS PR00423 Cell division protein FtsZ signature 192 214 1.5E-48 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 Pfam PF12327 FtsZ family, C-terminal domain 225 320 1.1E-36 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 Gene3D G3DSA:3.30.1330.20 218 323 5.4E-48 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 SMART SM00864 16 208 1.5E-104 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NHAM_RS06560 0074eea3e24deddc3458b8688ae93f77 607 SUPERFAMILY SSF52490 15 211 1.83E-67 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 NHAM_RS06455 ca4c5abda69fea6779da76444d38b94c 123 SUPERFAMILY SSF48295 1 60 3.92E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS06455 ca4c5abda69fea6779da76444d38b94c 123 Pfam PF13565 Homeodomain-like domain 35 109 4.6E-15 T 22-04-2016 NHAM_RS06455 ca4c5abda69fea6779da76444d38b94c 123 Gene3D G3DSA:1.10.10.10 2 55 2.7E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS18110 a3ded8ccddda8e0b681a65bdc8ee3836 127 PANTHER PTHR34981:SF1 1 127 2.5E-27 T 22-04-2016 NHAM_RS18110 a3ded8ccddda8e0b681a65bdc8ee3836 127 SUPERFAMILY SSF102829 3 80 1.27E-21 T 22-04-2016 IPR007838 Cell division protein ZapA-like NHAM_RS18110 a3ded8ccddda8e0b681a65bdc8ee3836 127 PANTHER PTHR34981 1 127 2.5E-27 T 22-04-2016 NHAM_RS18110 a3ded8ccddda8e0b681a65bdc8ee3836 127 Pfam PF05164 Cell division protein ZapA 4 78 1.6E-21 T 22-04-2016 IPR007838 Cell division protein ZapA-like NHAM_RS12415 15939fcd5ce882a1bbf4630166fa858c 272 SUPERFAMILY SSF51430 5 255 3.67E-88 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain NHAM_RS12415 15939fcd5ce882a1bbf4630166fa858c 272 Gene3D G3DSA:3.20.20.100 6 257 5.3E-95 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain NHAM_RS12415 15939fcd5ce882a1bbf4630166fa858c 272 PANTHER PTHR11732 1 272 2.6E-138 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta NHAM_RS12415 15939fcd5ce882a1bbf4630166fa858c 272 Pfam PF00248 Aldo/keto reductase family 14 254 5.4E-58 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain NHAM_RS12415 15939fcd5ce882a1bbf4630166fa858c 272 PANTHER PTHR11732:SF100 1 272 2.6E-138 T 22-04-2016 NHAM_RS12415 15939fcd5ce882a1bbf4630166fa858c 272 PRINTS PR00069 Aldo-keto reductase signature 89 107 8.6E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NHAM_RS12415 15939fcd5ce882a1bbf4630166fa858c 272 PRINTS PR00069 Aldo-keto reductase signature 33 57 8.6E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NHAM_RS12415 15939fcd5ce882a1bbf4630166fa858c 272 PRINTS PR00069 Aldo-keto reductase signature 120 137 8.6E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NHAM_RS12415 15939fcd5ce882a1bbf4630166fa858c 272 PRINTS PR00069 Aldo-keto reductase signature 191 215 8.6E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NHAM_RS12415 15939fcd5ce882a1bbf4630166fa858c 272 PRINTS PR00069 Aldo-keto reductase signature 154 183 8.6E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NHAM_RS12415 15939fcd5ce882a1bbf4630166fa858c 272 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 NHAM_RS12415 15939fcd5ce882a1bbf4630166fa858c 272 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 37 54 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 NHAM_RS06010 48c80859cf007dd7a60fdbcb602ee355 93 Pfam PF06233 Usg-like family 13 92 6.9E-38 T 22-04-2016 IPR009354 Usg-like UniPathway: UPA00035 NHAM_RS05095 1fead6aadccd8e8d29d3e09802b9176c 220 Gene3D G3DSA:3.40.50.2300 1 120 1.5E-38 T 22-04-2016 NHAM_RS05095 1fead6aadccd8e8d29d3e09802b9176c 220 SMART SM00862 145 216 2.4E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS05095 1fead6aadccd8e8d29d3e09802b9176c 220 Pfam PF00072 Response regulator receiver domain 3 112 2.7E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS05095 1fead6aadccd8e8d29d3e09802b9176c 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 215 6.3E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS05095 1fead6aadccd8e8d29d3e09802b9176c 220 Gene3D G3DSA:1.10.10.10 124 216 2.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS05095 1fead6aadccd8e8d29d3e09802b9176c 220 PANTHER PTHR26402 1 218 2.7E-84 T 22-04-2016 NHAM_RS05095 1fead6aadccd8e8d29d3e09802b9176c 220 SMART SM00448 1 112 7.7E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS05095 1fead6aadccd8e8d29d3e09802b9176c 220 SUPERFAMILY SSF52172 1 169 4.41E-38 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS05095 1fead6aadccd8e8d29d3e09802b9176c 220 PANTHER PTHR26402:SF279 1 218 2.7E-84 T 22-04-2016 NHAM_RS09005 273ba3efffe554cb03ee232dfb7cae0a 248 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 30 186 1.3E-31 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 NHAM_RS09005 273ba3efffe554cb03ee232dfb7cae0a 248 Gene3D G3DSA:1.10.10.10 27 92 9.8E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS09005 273ba3efffe554cb03ee232dfb7cae0a 248 SUPERFAMILY SSF46785 100 174 4.19E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS09005 273ba3efffe554cb03ee232dfb7cae0a 248 SUPERFAMILY SSF46785 24 94 1.18E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS09005 273ba3efffe554cb03ee232dfb7cae0a 248 Pfam PF04079 Segregation and condensation complex subunit ScpB 29 182 1.8E-47 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 NHAM_RS09005 273ba3efffe554cb03ee232dfb7cae0a 248 Gene3D G3DSA:1.10.10.10 99 174 1.6E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS09005 273ba3efffe554cb03ee232dfb7cae0a 248 PANTHER PTHR34298:SF2 10 245 5.4E-67 T 22-04-2016 NHAM_RS09005 273ba3efffe554cb03ee232dfb7cae0a 248 PANTHER PTHR34298 10 245 5.4E-67 T 22-04-2016 NHAM_RS10445 97e013131c5a60e0b6242263b76af5d5 501 Gene3D G3DSA:3.40.50.980 200 299 4.8E-7 T 22-04-2016 NHAM_RS10445 97e013131c5a60e0b6242263b76af5d5 501 PANTHER PTHR24096:SF170 9 327 2.1E-39 T 22-04-2016 NHAM_RS10445 97e013131c5a60e0b6242263b76af5d5 501 PANTHER PTHR24096:SF170 473 497 2.1E-39 T 22-04-2016 NHAM_RS10445 97e013131c5a60e0b6242263b76af5d5 501 SUPERFAMILY SSF56801 8 448 9.16E-36 T 22-04-2016 NHAM_RS10445 97e013131c5a60e0b6242263b76af5d5 501 Gene3D G3DSA:3.40.50.980 9 123 1.1E-15 T 22-04-2016 NHAM_RS10445 97e013131c5a60e0b6242263b76af5d5 501 Pfam PF00501 AMP-binding enzyme 18 423 5.0E-23 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NHAM_RS10445 97e013131c5a60e0b6242263b76af5d5 501 PANTHER PTHR24096 9 327 2.1E-39 T 22-04-2016 NHAM_RS10445 97e013131c5a60e0b6242263b76af5d5 501 PANTHER PTHR24096 473 497 2.1E-39 T 22-04-2016 NHAM_RS08715 ec8cc75f04dc3d6aac2723334211127f 396 PANTHER PTHR30372:SF0 6 389 8.7E-98 T 22-04-2016 NHAM_RS08715 ec8cc75f04dc3d6aac2723334211127f 396 PANTHER PTHR30372 6 389 8.7E-98 T 22-04-2016 NHAM_RS08715 ec8cc75f04dc3d6aac2723334211127f 396 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 10 390 32.616 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 NHAM_RS08715 ec8cc75f04dc3d6aac2723334211127f 396 SUPERFAMILY SSF53756 11 387 9.42E-30 T 22-04-2016 NHAM_RS08715 ec8cc75f04dc3d6aac2723334211127f 396 Gene3D G3DSA:3.40.50.2000 169 358 1.4E-10 T 22-04-2016 NHAM_RS08715 ec8cc75f04dc3d6aac2723334211127f 396 Pfam PF02684 Lipid-A-disaccharide synthetase 13 370 1.6E-88 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 NHAM_RS08715 ec8cc75f04dc3d6aac2723334211127f 396 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 12 387 4.6E-71 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 NHAM_RS08485 e682d5fda67095ffd28f50be75b09304 192 Pfam PF01627 Hpt domain 69 130 1.7E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NHAM_RS08485 e682d5fda67095ffd28f50be75b09304 192 Gene3D G3DSA:1.20.120.160 72 171 1.7E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NHAM_RS08485 e682d5fda67095ffd28f50be75b09304 192 SUPERFAMILY SSF47226 52 162 1.83E-14 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NHAM_RS06265 2fa26ef52e2d6f65d87539c0e99355ee 376 Gene3D G3DSA:3.40.50.1770 196 367 8.1E-40 T 22-04-2016 NHAM_RS06265 2fa26ef52e2d6f65d87539c0e99355ee 376 SUPERFAMILY SSF51735 136 316 3.48E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06265 2fa26ef52e2d6f65d87539c0e99355ee 376 PANTHER PTHR10160 1 374 1.5E-175 T 22-04-2016 NHAM_RS06265 2fa26ef52e2d6f65d87539c0e99355ee 376 Gene3D G3DSA:3.40.50.1770 1 168 1.4E-55 T 22-04-2016 NHAM_RS06265 2fa26ef52e2d6f65d87539c0e99355ee 376 Gene3D G3DSA:3.90.180.10 169 195 1.0E-4 T 22-04-2016 IPR011032 GroES-like NHAM_RS06265 2fa26ef52e2d6f65d87539c0e99355ee 376 SMART SM01003 4 136 6.6E-60 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NHAM_RS06265 2fa26ef52e2d6f65d87539c0e99355ee 376 SUPERFAMILY SSF52283 1 167 1.11E-49 T 22-04-2016 NHAM_RS06265 2fa26ef52e2d6f65d87539c0e99355ee 376 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 368 6.1E-72 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NHAM_RS06265 2fa26ef52e2d6f65d87539c0e99355ee 376 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 136 7.9E-40 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NHAM_RS06265 2fa26ef52e2d6f65d87539c0e99355ee 376 SMART SM01002 145 311 5.3E-88 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NHAM_RS06265 2fa26ef52e2d6f65d87539c0e99355ee 376 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 169 194 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 NHAM_RS17980 db0025e1fe6000df0ce7a95b4fc1f8d3 417 Gene3D G3DSA:1.20.1250.20 25 202 3.8E-21 T 22-04-2016 NHAM_RS17980 db0025e1fe6000df0ce7a95b4fc1f8d3 417 Gene3D G3DSA:1.20.1250.20 228 409 9.8E-22 T 22-04-2016 NHAM_RS17980 db0025e1fe6000df0ce7a95b4fc1f8d3 417 PANTHER PTHR11360 16 412 8.2E-155 T 22-04-2016 NHAM_RS17980 db0025e1fe6000df0ce7a95b4fc1f8d3 417 SUPERFAMILY SSF103473 14 406 2.09E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS17980 db0025e1fe6000df0ce7a95b4fc1f8d3 417 PANTHER PTHR11360:SF115 16 412 8.2E-155 T 22-04-2016 NHAM_RS17980 db0025e1fe6000df0ce7a95b4fc1f8d3 417 Pfam PF07690 Major Facilitator Superfamily 28 369 2.0E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS02550 e8d056e6b94877c4e89d314a6180f96a 109 Pfam PF07238 PilZ domain 5 89 1.0E-6 T 22-04-2016 IPR009875 PilZ domain GO:0035438 NHAM_RS02550 e8d056e6b94877c4e89d314a6180f96a 109 SUPERFAMILY SSF141371 4 88 7.65E-9 T 22-04-2016 NHAM_RS02240 e443109c882bdda9fc25cdf4882938ad 236 SUPERFAMILY SSF47781 27 95 4.14E-5 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 NHAM_RS02240 e443109c882bdda9fc25cdf4882938ad 236 Gene3D G3DSA:3.40.140.10 112 232 3.7E-47 T 22-04-2016 NHAM_RS02240 e443109c882bdda9fc25cdf4882938ad 236 Pfam PF04002 RadC-like JAB domain 116 232 2.5E-43 T 22-04-2016 IPR025657 RadC-like JAB domain NHAM_RS02240 e443109c882bdda9fc25cdf4882938ad 236 PANTHER PTHR30471:SF3 12 236 1.4E-84 T 22-04-2016 NHAM_RS02240 e443109c882bdda9fc25cdf4882938ad 236 PANTHER PTHR30471 12 236 1.4E-84 T 22-04-2016 NHAM_RS02240 e443109c882bdda9fc25cdf4882938ad 236 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 185 190 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site NHAM_RS02240 e443109c882bdda9fc25cdf4882938ad 236 TIGRFAM TIGR00608 radc: DNA repair protein RadC 23 231 1.3E-68 T 22-04-2016 IPR001405 RadC protein NHAM_RS02240 e443109c882bdda9fc25cdf4882938ad 236 SUPERFAMILY SSF102712 158 202 6.15E-6 T 22-04-2016 NHAM_RS24040 46ee22efa3e458839ec062dd2af7b17c 165 Pfam PF10979 Protein of unknown function (DUF2786) 15 52 4.5E-10 T 22-04-2016 IPR024498 Domain of unknown function DUF2786 NHAM_RS12845 6d54fe0493fc972580f317cdd1639918 163 Gene3D G3DSA:3.40.50.150 17 150 2.8E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS12845 6d54fe0493fc972580f317cdd1639918 163 SUPERFAMILY SSF53335 15 150 1.88E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS12845 6d54fe0493fc972580f317cdd1639918 163 Pfam PF00145 C-5 cytosine-specific DNA methylase 19 149 9.4E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS12845 6d54fe0493fc972580f317cdd1639918 163 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 86 98 - T 22-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 NHAM_RS12845 6d54fe0493fc972580f317cdd1639918 163 PANTHER PTHR10629 19 136 2.3E-27 T 22-04-2016 NHAM_RS12845 6d54fe0493fc972580f317cdd1639918 163 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 19 35 1.4E-9 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 NHAM_RS12845 6d54fe0493fc972580f317cdd1639918 163 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 124 138 1.4E-9 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 NHAM_RS08520 133df7d357b85c5fa61c12789bb1be17 187 PANTHER PTHR23026 3 187 1.5E-76 T 22-04-2016 NHAM_RS08520 133df7d357b85c5fa61c12789bb1be17 187 Pfam PF00881 Nitroreductase family 8 166 2.5E-23 T 22-04-2016 IPR029479 Nitroreductase NHAM_RS08520 133df7d357b85c5fa61c12789bb1be17 187 Gene3D G3DSA:3.40.109.10 2 185 4.5E-38 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 NHAM_RS08520 133df7d357b85c5fa61c12789bb1be17 187 PANTHER PTHR23026:SF107 3 187 1.5E-76 T 22-04-2016 NHAM_RS08520 133df7d357b85c5fa61c12789bb1be17 187 PIRSF PIRSF000232 1 187 4.6E-58 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- NHAM_RS08520 133df7d357b85c5fa61c12789bb1be17 187 SUPERFAMILY SSF55469 2 186 3.4E-35 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 NHAM_RS13390 ada8b8f6ec4ae3f7df24520565b3dacf 332 PANTHER PTHR36512:SF3 2 330 2.8E-130 T 22-04-2016 NHAM_RS13390 ada8b8f6ec4ae3f7df24520565b3dacf 332 PANTHER PTHR36512 2 330 2.8E-130 T 22-04-2016 NHAM_RS13390 ada8b8f6ec4ae3f7df24520565b3dacf 332 SUPERFAMILY SSF56266 2 321 1.54E-69 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 NHAM_RS13390 ada8b8f6ec4ae3f7df24520565b3dacf 332 Gene3D G3DSA:3.60.70.12 2 321 3.4E-79 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 NHAM_RS13390 ada8b8f6ec4ae3f7df24520565b3dacf 332 Pfam PF03576 Peptidase family S58 3 320 1.4E-63 T 22-04-2016 IPR005321 Peptidase S58, DmpA NHAM_RS17930 a808eb429c6a3b0e1dbc797ba6eb7bcf 223 SUPERFAMILY SSF52833 46 211 2.57E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS17930 a808eb429c6a3b0e1dbc797ba6eb7bcf 223 Gene3D G3DSA:3.40.30.10 48 216 1.7E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS17930 a808eb429c6a3b0e1dbc797ba6eb7bcf 223 ProSitePatterns PS00194 Thioredoxin family active site. 67 85 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NHAM_RS17930 a808eb429c6a3b0e1dbc797ba6eb7bcf 223 Pfam PF13462 Thioredoxin 58 212 9.2E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS17930 a808eb429c6a3b0e1dbc797ba6eb7bcf 223 PANTHER PTHR13887 5 218 4.8E-71 T 22-04-2016 NHAM_RS17930 a808eb429c6a3b0e1dbc797ba6eb7bcf 223 PANTHER PTHR13887:SF25 5 218 4.8E-71 T 22-04-2016 NHAM_RS00105 8b62a74d76fdbec91b933e45fb27aa4e 331 Gene3D G3DSA:3.40.50.300 116 320 7.2E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00105 8b62a74d76fdbec91b933e45fb27aa4e 331 SUPERFAMILY SSF52540 116 290 8.34E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00105 8b62a74d76fdbec91b933e45fb27aa4e 331 Pfam PF02562 PhoH-like protein 117 320 1.3E-90 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 NHAM_RS00105 8b62a74d76fdbec91b933e45fb27aa4e 331 SUPERFAMILY SSF54791 15 72 3.48E-7 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 NHAM_RS00105 8b62a74d76fdbec91b933e45fb27aa4e 331 PANTHER PTHR30473 7 320 5.0E-156 T 22-04-2016 NHAM_RS00105 8b62a74d76fdbec91b933e45fb27aa4e 331 PANTHER PTHR30473:SF1 7 320 5.0E-156 T 22-04-2016 NHAM_RS06820 0ac3f29375efd71a02cb4e06e30bbacc 143 PIRSF PIRSF009533 1 142 7.8E-41 T 22-04-2016 IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 NHAM_RS06820 0ac3f29375efd71a02cb4e06e30bbacc 143 Pfam PF07378 Flagellar protein FlbT 3 124 1.4E-39 T 22-04-2016 IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 NHAM_RS19820 f21292976f59cb2d91e15f952dc0d3e1 303 PANTHER PTHR35004:SF2 1 200 1.3E-29 T 22-04-2016 NHAM_RS19820 f21292976f59cb2d91e15f952dc0d3e1 303 Gene3D G3DSA:3.30.420.10 23 121 1.6E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS19820 f21292976f59cb2d91e15f952dc0d3e1 303 Pfam PF00665 Integrase core domain 6 100 3.1E-9 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS19820 f21292976f59cb2d91e15f952dc0d3e1 303 PANTHER PTHR35004 1 200 1.3E-29 T 22-04-2016 NHAM_RS13330 695aa9697a0c2fc9a6211a342c959cbf 303 Pfam PF07728 AAA domain (dynein-related subfamily) 43 197 3.1E-12 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 NHAM_RS13330 695aa9697a0c2fc9a6211a342c959cbf 303 PANTHER PTHR22908 10 298 2.6E-157 T 22-04-2016 NHAM_RS13330 695aa9697a0c2fc9a6211a342c959cbf 303 PANTHER PTHR22908:SF67 10 298 2.6E-157 T 22-04-2016 NHAM_RS13330 695aa9697a0c2fc9a6211a342c959cbf 303 SUPERFAMILY SSF52540 36 83 1.95E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13330 695aa9697a0c2fc9a6211a342c959cbf 303 SUPERFAMILY SSF52540 117 287 1.95E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13330 695aa9697a0c2fc9a6211a342c959cbf 303 Gene3D G3DSA:3.40.50.300 37 228 2.5E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13330 695aa9697a0c2fc9a6211a342c959cbf 303 SMART SM00382 39 217 5.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS07120 5f5bdefb306987a69da1fc3462b8d96d 87 PANTHER PTHR34040 1 86 2.1E-24 T 22-04-2016 NHAM_RS07120 5f5bdefb306987a69da1fc3462b8d96d 87 PIRSF PIRSF004669 1 86 1.0E-26 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NHAM_RS07120 5f5bdefb306987a69da1fc3462b8d96d 87 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.8E-18 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NHAM_RS07120 5f5bdefb306987a69da1fc3462b8d96d 87 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.8E-18 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NHAM_RS07120 5f5bdefb306987a69da1fc3462b8d96d 87 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.8E-18 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NHAM_RS07120 5f5bdefb306987a69da1fc3462b8d96d 87 Pfam PF01313 Bacterial export proteins, family 3 6 74 3.2E-28 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NHAM_RS07120 5f5bdefb306987a69da1fc3462b8d96d 87 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 84 7.5E-28 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 NHAM_RS07120 5f5bdefb306987a69da1fc3462b8d96d 87 PANTHER PTHR34040:SF2 1 86 2.1E-24 T 22-04-2016 NHAM_RS19420 c9026b13ce08839351a8f9b109109e90 265 PANTHER PTHR30007 10 261 3.5E-82 T 22-04-2016 NHAM_RS19420 c9026b13ce08839351a8f9b109109e90 265 Pfam PF01609 Transposase DDE domain 106 253 7.5E-24 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS19420 c9026b13ce08839351a8f9b109109e90 265 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 15 88 6.3E-26 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS19420 c9026b13ce08839351a8f9b109109e90 265 PANTHER PTHR30007:SF0 10 261 3.5E-82 T 22-04-2016 NHAM_RS03675 0ffecf1fb0a269190db90aff078a536a 140 PANTHER PTHR33452:SF6 11 127 9.0E-22 T 22-04-2016 NHAM_RS03675 0ffecf1fb0a269190db90aff078a536a 140 Pfam PF07681 DoxX 8 88 5.6E-16 T 22-04-2016 IPR032808 DoxX family NHAM_RS03675 0ffecf1fb0a269190db90aff078a536a 140 PANTHER PTHR33452 11 127 9.0E-22 T 22-04-2016 NHAM_RS18655 eddc4be882a5e7336219a4c1928e3bce 340 SUPERFAMILY SSF143631 29 324 2.43E-88 T 22-04-2016 IPR003374 ApbE-like domain NHAM_RS18655 eddc4be882a5e7336219a4c1928e3bce 340 Pfam PF02424 ApbE family 35 316 1.1E-71 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 NHAM_RS18655 eddc4be882a5e7336219a4c1928e3bce 340 PIRSF PIRSF006268 19 337 6.0E-77 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 NHAM_RS18655 eddc4be882a5e7336219a4c1928e3bce 340 PANTHER PTHR30040 26 340 1.5E-99 T 22-04-2016 NHAM_RS18655 eddc4be882a5e7336219a4c1928e3bce 340 PANTHER PTHR30040:SF3 26 340 1.5E-99 T 22-04-2016 NHAM_RS05340 1273ffa67d16d95b7a3bd1d95821e393 213 PANTHER PTHR13696 1 211 3.4E-33 T 22-04-2016 NHAM_RS05340 1273ffa67d16d95b7a3bd1d95821e393 213 SUPERFAMILY SSF52540 1 208 1.52E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05340 1273ffa67d16d95b7a3bd1d95821e393 213 PIRSF PIRSF009320 2 213 3.6E-50 T 22-04-2016 NHAM_RS05340 1273ffa67d16d95b7a3bd1d95821e393 213 Gene3D G3DSA:3.40.50.300 1 208 5.0E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05340 1273ffa67d16d95b7a3bd1d95821e393 213 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 156 2.6E-20 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NHAM_RS09210 195ec17357f1e0e8521ebfe7463f56b3 128 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 17 125 2.3E-28 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein NHAM_RS09210 195ec17357f1e0e8521ebfe7463f56b3 128 SUPERFAMILY SSF64076 9 127 1.06E-37 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein NHAM_RS09210 195ec17357f1e0e8521ebfe7463f56b3 128 PANTHER PTHR21192 3 125 1.1E-48 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein NHAM_RS09210 195ec17357f1e0e8521ebfe7463f56b3 128 PANTHER PTHR21192:SF3 3 125 1.1E-48 T 22-04-2016 NHAM_RS09210 195ec17357f1e0e8521ebfe7463f56b3 128 Gene3D G3DSA:3.40.1230.10 12 127 2.2E-36 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 SUPERFAMILY SSF109604 20 165 8.73E-87 T 22-04-2016 NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 SUPERFAMILY SSF109604 197 400 8.73E-87 T 22-04-2016 NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 SMART SM00471 65 226 1.6E-12 T 22-04-2016 IPR003607 HD/PDEase domain NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 PANTHER PTHR11373:SF25 5 392 5.4E-83 T 22-04-2016 NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 31 397 5.0E-101 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 Pfam PF13286 Phosphohydrolase-associated domain 303 395 4.2E-23 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 Gene3D G3DSA:1.10.3210.10 28 165 3.1E-82 T 22-04-2016 IPR006674 HD domain NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 Gene3D G3DSA:1.10.3210.10 292 401 3.1E-82 T 22-04-2016 IPR006674 HD domain NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 Gene3D G3DSA:1.10.3210.10 198 223 3.1E-82 T 22-04-2016 IPR006674 HD domain NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 PANTHER PTHR11373 5 392 5.4E-83 T 22-04-2016 NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 9 397 39.482 T 22-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 Gene3D G3DSA:1.10.3410.10 224 278 7.5E-4 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain NHAM_RS08980 0e8f30b3f6ce896f4c8f67fb95e77aba 404 Pfam PF01966 HD domain 69 215 6.1E-16 T 22-04-2016 IPR006674 HD domain NHAM_RS03000 69276b981acafbeb0407a84f985bf1ed 96 SUPERFAMILY SSF143011 21 92 5.49E-13 T 22-04-2016 NHAM_RS03000 69276b981acafbeb0407a84f985bf1ed 96 PANTHER PTHR40266 1 96 3.6E-14 T 22-04-2016 NHAM_RS03000 69276b981acafbeb0407a84f985bf1ed 96 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 8 96 1.3E-19 T 22-04-2016 IPR007711 Toxin HigB-1 NHAM_RS03000 69276b981acafbeb0407a84f985bf1ed 96 PANTHER PTHR40266:SF2 1 96 3.6E-14 T 22-04-2016 NHAM_RS02825 7202d95d15f92f23f1e597ed5f37645a 397 Pfam PF08442 ATP-grasp domain 2 213 8.4E-74 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS02825 7202d95d15f92f23f1e597ed5f37645a 397 PANTHER PTHR11815 1 396 2.5E-232 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 NHAM_RS02825 7202d95d15f92f23f1e597ed5f37645a 397 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 396 41.346 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 NHAM_RS02825 7202d95d15f92f23f1e597ed5f37645a 397 SUPERFAMILY SSF52210 251 395 3.4E-54 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS02825 7202d95d15f92f23f1e597ed5f37645a 397 SUPERFAMILY SSF56059 1 248 8.25E-80 T 22-04-2016 NHAM_RS02825 7202d95d15f92f23f1e597ed5f37645a 397 Pfam PF00549 CoA-ligase 272 391 1.4E-27 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS02825 7202d95d15f92f23f1e597ed5f37645a 397 Gene3D G3DSA:3.40.50.261 252 393 6.0E-66 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 NHAM_RS02825 7202d95d15f92f23f1e597ed5f37645a 397 Gene3D G3DSA:3.30.1490.20 22 105 6.9E-33 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS02825 7202d95d15f92f23f1e597ed5f37645a 397 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 395 5.1E-156 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 NHAM_RS02825 7202d95d15f92f23f1e597ed5f37645a 397 Gene3D G3DSA:3.30.470.20 106 249 9.1E-56 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS02825 7202d95d15f92f23f1e597ed5f37645a 397 PANTHER PTHR11815:SF1 1 396 2.5E-232 T 22-04-2016 NHAM_RS02825 7202d95d15f92f23f1e597ed5f37645a 397 PIRSF PIRSF001554 1 397 8.2E-150 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 NHAM_RS03850 591f2b7aecb9594f45220d3107d2c91b 154 SUPERFAMILY SSF81901 19 115 7.06E-19 T 22-04-2016 NHAM_RS03850 591f2b7aecb9594f45220d3107d2c91b 154 Pfam PF08238 Sel1 repeat 86 114 1.1E-6 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS03850 591f2b7aecb9594f45220d3107d2c91b 154 Pfam PF08238 Sel1 repeat 46 79 0.05 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS03850 591f2b7aecb9594f45220d3107d2c91b 154 Gene3D G3DSA:1.25.40.10 14 114 8.0E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS03850 591f2b7aecb9594f45220d3107d2c91b 154 PANTHER PTHR11102:SF98 42 112 5.2E-13 T 22-04-2016 NHAM_RS03850 591f2b7aecb9594f45220d3107d2c91b 154 PANTHER PTHR11102 42 112 5.2E-13 T 22-04-2016 NHAM_RS03850 591f2b7aecb9594f45220d3107d2c91b 154 SMART SM00671 45 80 0.0013 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS03850 591f2b7aecb9594f45220d3107d2c91b 154 SMART SM00671 81 116 3.3E-5 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS03775 1668b45639f7499fbc3aecc09eb4b2cb 142 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 5 138 1.7E-43 T 22-04-2016 IPR014172 TonB-system energizer ExbB type-2 GO:0006810|GO:0016020 NHAM_RS03775 1668b45639f7499fbc3aecc09eb4b2cb 142 PANTHER PTHR30625 18 139 1.4E-25 T 22-04-2016 NHAM_RS03775 1668b45639f7499fbc3aecc09eb4b2cb 142 PANTHER PTHR30625:SF6 18 139 1.4E-25 T 22-04-2016 NHAM_RS03775 1668b45639f7499fbc3aecc09eb4b2cb 142 Pfam PF01618 MotA/TolQ/ExbB proton channel family 46 138 5.2E-26 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 Gene3D G3DSA:3.40.192.10 69 189 9.0E-60 T 22-04-2016 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 Gene3D G3DSA:1.10.285.10 376 450 3.0E-24 T 22-04-2016 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 Gene3D G3DSA:1.10.285.10 8 68 4.6E-23 T 22-04-2016 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 PIRSF PIRSF000185 23 451 3.7E-116 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 123 136 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 375 386 4.1E-30 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 4.1E-30 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 237 257 4.1E-30 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 195 217 4.1E-30 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 204 449 1.4E-84 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 PANTHER PTHR11606:SF4 1 451 7.2E-234 T 22-04-2016 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 Gene3D G3DSA:3.40.50.720 211 375 3.3E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 185 5.7E-49 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 SUPERFAMILY SSF53223 9 198 1.06E-72 T 22-04-2016 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 SUPERFAMILY SSF51735 204 450 2.36E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 SMART SM00839 206 449 2.0E-80 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 NHAM_RS05085 689e39c425db78442005e2c53ee2f427 451 PANTHER PTHR11606 1 451 7.2E-234 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 Gene3D G3DSA:2.20.25.90 72 127 3.3E-16 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 Gene3D G3DSA:2.40.40.20 796 807 1.9E-50 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 Gene3D G3DSA:2.40.40.20 843 981 1.9E-50 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 Gene3D G3DSA:2.40.40.20 664 685 1.9E-50 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 PANTHER PTHR11615 21 393 0.0 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 PANTHER PTHR11615 412 608 0.0 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 Gene3D G3DSA:3.40.228.10 202 381 2.6E-64 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 PANTHER PTHR11615:SF140 21 393 0.0 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 PANTHER PTHR11615:SF140 412 608 0.0 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 Gene3D G3DSA:3.40.50.740 382 409 9.8E-35 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 Gene3D G3DSA:3.40.50.740 450 663 9.8E-35 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 PANTHER PTHR11615 759 983 0.0 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 74 126 1.9E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 PANTHER PTHR11615:SF140 759 983 0.0 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 SUPERFAMILY SSF50692 780 810 2.94E-36 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 SUPERFAMILY SSF50692 844 981 2.94E-36 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 SUPERFAMILY SSF53706 71 621 8.64E-191 T 22-04-2016 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 77 94 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 Pfam PF00384 Molybdopterin oxidoreductase 129 577 1.0E-51 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 Pfam PF01568 Molydopterin dinucleotide binding domain 848 976 8.3E-20 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NHAM_RS16035 2cf500da6cfa04718432845ae2c40e29 983 SMART SM00926 72 126 9.9E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 NHAM_RS05975 65a8f37593d74cf197cff8ddc1821255 185 SUPERFAMILY SSF48592 5 122 6.15E-28 T 22-04-2016 NHAM_RS05975 65a8f37593d74cf197cff8ddc1821255 185 Pfam PF00118 TCP-1/cpn60 chaperonin family 5 119 3.6E-23 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 NHAM_RS05975 65a8f37593d74cf197cff8ddc1821255 185 Gene3D G3DSA:1.10.560.10 5 115 9.8E-35 T 22-04-2016 IPR027413 GroEL-like equatorial domain NHAM_RS05975 65a8f37593d74cf197cff8ddc1821255 185 PANTHER PTHR11353 9 141 2.8E-58 T 22-04-2016 NHAM_RS03570 bc766cda834296ef48555c4d782958ed 116 SUPERFAMILY SSF101801 39 114 9.02E-23 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) NHAM_RS03570 bc766cda834296ef48555c4d782958ed 116 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 41 111 3.6E-24 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) NHAM_RS03570 bc766cda834296ef48555c4d782958ed 116 PANTHER PTHR30034 28 115 7.1E-20 T 22-04-2016 NHAM_RS03570 bc766cda834296ef48555c4d782958ed 116 Gene3D G3DSA:2.30.330.10 34 114 3.4E-30 T 22-04-2016 NHAM_RS03570 bc766cda834296ef48555c4d782958ed 116 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 39 113 2.9E-29 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 NHAM_RS03570 bc766cda834296ef48555c4d782958ed 116 PANTHER PTHR30034:SF1 28 115 7.1E-20 T 22-04-2016 NHAM_RS03570 bc766cda834296ef48555c4d782958ed 116 PRINTS PR00956 Flagellar motor switch protein FliN signature 87 102 3.1E-24 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 NHAM_RS03570 bc766cda834296ef48555c4d782958ed 116 PRINTS PR00956 Flagellar motor switch protein FliN signature 41 57 3.1E-24 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 NHAM_RS03570 bc766cda834296ef48555c4d782958ed 116 PRINTS PR00956 Flagellar motor switch protein FliN signature 58 74 3.1E-24 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 NHAM_RS03570 bc766cda834296ef48555c4d782958ed 116 PRINTS PR00956 Flagellar motor switch protein FliN signature 74 87 3.1E-24 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 NHAM_RS06360 2cadb16a121baf0a3957a83bb7016cc1 216 Gene3D G3DSA:3.40.810.20 3 212 1.4E-93 T 22-04-2016 NHAM_RS06360 2cadb16a121baf0a3957a83bb7016cc1 216 SMART SM00882 6 204 2.2E-78 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NHAM_RS06360 2cadb16a121baf0a3957a83bb7016cc1 216 PANTHER PTHR13707 2 215 8.6E-136 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NHAM_RS06360 2cadb16a121baf0a3957a83bb7016cc1 216 Pfam PF01144 Coenzyme A transferase 6 203 8.7E-41 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NHAM_RS06360 2cadb16a121baf0a3957a83bb7016cc1 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 210 6.1E-98 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 NHAM_RS06360 2cadb16a121baf0a3957a83bb7016cc1 216 SUPERFAMILY SSF100950 3 212 4.47E-74 T 22-04-2016 NHAM_RS16200 42b55dc98768449c437fd18dab849784 284 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 20 247 3.9E-39 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA NHAM_RS16200 42b55dc98768449c437fd18dab849784 284 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 11 247 4.0E-46 T 22-04-2016 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 NHAM_RS16200 42b55dc98768449c437fd18dab849784 284 Pfam PF13344 Haloacid dehalogenase-like hydrolase 20 109 1.5E-13 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA NHAM_RS16200 42b55dc98768449c437fd18dab849784 284 SUPERFAMILY SSF56784 18 256 1.26E-42 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS16200 42b55dc98768449c437fd18dab849784 284 Gene3D G3DSA:3.40.50.1000 193 255 1.5E-23 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS16200 42b55dc98768449c437fd18dab849784 284 Gene3D G3DSA:3.40.50.1000 8 85 1.5E-23 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS16200 42b55dc98768449c437fd18dab849784 284 Pfam PF13242 HAD-hyrolase-like 195 255 2.2E-10 T 22-04-2016 NHAM_RS16200 42b55dc98768449c437fd18dab849784 284 PANTHER PTHR19288 7 262 4.0E-68 T 22-04-2016 NHAM_RS16200 42b55dc98768449c437fd18dab849784 284 PANTHER PTHR19288:SF3 7 262 4.0E-68 T 22-04-2016 NHAM_RS04610 111b2f56fe6ed71c44b26c7d1dda96b8 367 Pfam PF01699 Sodium/calcium exchanger protein 214 357 4.7E-19 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 NHAM_RS04610 111b2f56fe6ed71c44b26c7d1dda96b8 367 Pfam PF01699 Sodium/calcium exchanger protein 35 188 3.5E-17 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 NHAM_RS04610 111b2f56fe6ed71c44b26c7d1dda96b8 367 TIGRFAM TIGR00378 cax: calcium/proton exchanger 16 356 2.3E-86 T 22-04-2016 IPR004798 Calcium/proton exchanger CAX GO:0006816|GO:0015369 NHAM_RS04610 111b2f56fe6ed71c44b26c7d1dda96b8 367 PANTHER PTHR31503 8 360 9.9E-104 T 22-04-2016 NHAM_RS09180 4382be3d944a1f2371f9dbca2c0d6c90 449 SUPERFAMILY SSF51261 210 446 1.2E-49 T 22-04-2016 IPR011055 Duplicated hybrid motif NHAM_RS09180 4382be3d944a1f2371f9dbca2c0d6c90 449 PANTHER PTHR21666 327 447 9.2E-44 T 22-04-2016 NHAM_RS09180 4382be3d944a1f2371f9dbca2c0d6c90 449 SMART SM00257 208 252 5.8E-13 T 22-04-2016 IPR018392 LysM domain NHAM_RS09180 4382be3d944a1f2371f9dbca2c0d6c90 449 SMART SM00257 138 182 6.6E-9 T 22-04-2016 IPR018392 LysM domain NHAM_RS09180 4382be3d944a1f2371f9dbca2c0d6c90 449 Pfam PF01476 LysM domain 141 182 3.7E-10 T 22-04-2016 IPR018392 LysM domain NHAM_RS09180 4382be3d944a1f2371f9dbca2c0d6c90 449 Pfam PF01476 LysM domain 209 252 4.6E-10 T 22-04-2016 IPR018392 LysM domain NHAM_RS09180 4382be3d944a1f2371f9dbca2c0d6c90 449 SUPERFAMILY SSF54106 139 182 2.49E-7 T 22-04-2016 IPR018392 LysM domain NHAM_RS09180 4382be3d944a1f2371f9dbca2c0d6c90 449 Gene3D G3DSA:2.70.70.10 312 447 1.8E-44 T 22-04-2016 NHAM_RS09180 4382be3d944a1f2371f9dbca2c0d6c90 449 Pfam PF01551 Peptidase family M23 347 442 4.2E-31 T 22-04-2016 IPR016047 Peptidase M23 NHAM_RS09180 4382be3d944a1f2371f9dbca2c0d6c90 449 Gene3D G3DSA:3.10.350.10 143 183 4.6E-11 T 22-04-2016 IPR018392 LysM domain NHAM_RS09180 4382be3d944a1f2371f9dbca2c0d6c90 449 Gene3D G3DSA:3.10.350.10 208 253 1.1E-13 T 22-04-2016 IPR018392 LysM domain NHAM_RS16325 170a6d357acf6cf1c68a7aa8fdcf6fae 313 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 25 305 3.6E-109 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 NHAM_RS16325 170a6d357acf6cf1c68a7aa8fdcf6fae 313 PANTHER PTHR11048:SF28 14 309 5.7E-122 T 22-04-2016 NHAM_RS16325 170a6d357acf6cf1c68a7aa8fdcf6fae 313 PANTHER PTHR11048 14 309 5.7E-122 T 22-04-2016 NHAM_RS16325 170a6d357acf6cf1c68a7aa8fdcf6fae 313 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 85 107 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site NHAM_RS16325 170a6d357acf6cf1c68a7aa8fdcf6fae 313 Pfam PF01040 UbiA prenyltransferase family 42 287 5.9E-54 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 NHAM_RS16325 170a6d357acf6cf1c68a7aa8fdcf6fae 313 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 19 306 27.324 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 NHAM_RS13605 c0207090d68bb68a806a1bd11ddad97f 83 Pfam PF04226 Transglycosylase associated protein 37 82 6.5E-8 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 NHAM_RS09050 ef4d063678d5b44dc1f0214de20beb36 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 5 363 53.643 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS09050 ef4d063678d5b44dc1f0214de20beb36 377 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 365 2.7E-140 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS09050 ef4d063678d5b44dc1f0214de20beb36 377 Gene3D G3DSA:3.20.20.105 5 365 2.0E-148 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS09050 ef4d063678d5b44dc1f0214de20beb36 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 131 364 1.2E-77 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS09050 ef4d063678d5b44dc1f0214de20beb36 377 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 365 3.1E-137 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS09050 ef4d063678d5b44dc1f0214de20beb36 377 PANTHER PTHR21148 1 371 3.3E-154 T 22-04-2016 NHAM_RS09050 ef4d063678d5b44dc1f0214de20beb36 377 PANTHER PTHR21148:SF26 1 371 3.3E-154 T 22-04-2016 NHAM_RS09050 ef4d063678d5b44dc1f0214de20beb36 377 SUPERFAMILY SSF51713 6 364 1.7E-143 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS14950 e05e99fa1da8153a0fbf8c042a9bd260 354 PANTHER PTHR30582:SF1 135 301 2.1E-74 T 22-04-2016 NHAM_RS14950 e05e99fa1da8153a0fbf8c042a9bd260 354 SUPERFAMILY SSF141523 162 296 1.12E-32 T 22-04-2016 NHAM_RS14950 e05e99fa1da8153a0fbf8c042a9bd260 354 PANTHER PTHR30582 135 301 2.1E-74 T 22-04-2016 NHAM_RS14950 e05e99fa1da8153a0fbf8c042a9bd260 354 Gene3D G3DSA:2.40.440.10 162 296 2.9E-34 T 22-04-2016 NHAM_RS14950 e05e99fa1da8153a0fbf8c042a9bd260 354 Pfam PF03734 L,D-transpeptidase catalytic domain 168 295 2.9E-16 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NHAM_RS03920 cb27af43d3e41c4ea45336903ee09b7a 288 PANTHER PTHR13903:SF12 1 284 9.6E-161 T 22-04-2016 NHAM_RS03920 cb27af43d3e41c4ea45336903ee09b7a 288 PANTHER PTHR13903 1 284 9.6E-161 T 22-04-2016 IPR012093 Pirin NHAM_RS03920 cb27af43d3e41c4ea45336903ee09b7a 288 PIRSF PIRSF006232 1 288 1.2E-90 T 22-04-2016 IPR012093 Pirin NHAM_RS03920 cb27af43d3e41c4ea45336903ee09b7a 288 Pfam PF02678 Pirin 21 127 1.6E-34 T 22-04-2016 IPR003829 Pirin, N-terminal domain NHAM_RS03920 cb27af43d3e41c4ea45336903ee09b7a 288 Gene3D G3DSA:2.60.120.10 9 257 4.3E-78 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS03920 cb27af43d3e41c4ea45336903ee09b7a 288 Pfam PF05726 Pirin C-terminal cupin domain 183 284 2.4E-27 T 22-04-2016 IPR008778 Pirin, C-terminal domain NHAM_RS03920 cb27af43d3e41c4ea45336903ee09b7a 288 SUPERFAMILY SSF51182 8 287 1.53E-84 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS13495 cb8cd29612306fd588bd54235a7093a6 163 SUPERFAMILY SSF55083 1 152 2.35E-50 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NHAM_RS13495 cb8cd29612306fd588bd54235a7093a6 163 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 135 4.3E-42 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NHAM_RS13495 cb8cd29612306fd588bd54235a7093a6 163 Gene3D G3DSA:3.30.70.560 3 150 1.0E-51 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NHAM_RS13495 cb8cd29612306fd588bd54235a7093a6 163 PANTHER PTHR20941:SF10 1 159 3.0E-66 T 22-04-2016 NHAM_RS13495 cb8cd29612306fd588bd54235a7093a6 163 PANTHER PTHR20941 1 159 3.0E-66 T 22-04-2016 NHAM_RS13495 cb8cd29612306fd588bd54235a7093a6 163 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 90 101 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NHAM_RS13495 cb8cd29612306fd588bd54235a7093a6 163 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 135 1.9E-36 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NHAM_RS19155 24735844ea2dd0288179146f6be7208f 444 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 57 68 2.6E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NHAM_RS19155 24735844ea2dd0288179146f6be7208f 444 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 137 150 2.6E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NHAM_RS19155 24735844ea2dd0288179146f6be7208f 444 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 110 127 2.6E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NHAM_RS19155 24735844ea2dd0288179146f6be7208f 444 PANTHER PTHR21581 19 278 4.1E-73 T 22-04-2016 NHAM_RS19155 24735844ea2dd0288179146f6be7208f 444 Gene3D G3DSA:3.40.710.10 27 269 1.6E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS19155 24735844ea2dd0288179146f6be7208f 444 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 250 1.4E-58 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 NHAM_RS19155 24735844ea2dd0288179146f6be7208f 444 SUPERFAMILY SSF56601 10 269 5.91E-73 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS07535 7dd1eff294fc14d8ff36e5a5804ffa63 536 PANTHER PTHR33362 323 523 3.3E-280 T 22-04-2016 NHAM_RS07535 7dd1eff294fc14d8ff36e5a5804ffa63 536 PANTHER PTHR33362 1 283 3.3E-280 T 22-04-2016 NHAM_RS07535 7dd1eff294fc14d8ff36e5a5804ffa63 536 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 321 2.2E-55 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit NHAM_RS07535 7dd1eff294fc14d8ff36e5a5804ffa63 536 PANTHER PTHR33362:SF7 323 523 3.3E-280 T 22-04-2016 NHAM_RS07535 7dd1eff294fc14d8ff36e5a5804ffa63 536 PANTHER PTHR33362:SF7 1 283 3.3E-280 T 22-04-2016 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 PANTHER PTHR12815:SF11 601 764 1.4E-203 T 22-04-2016 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 PANTHER PTHR12815:SF11 23 573 1.4E-203 T 22-04-2016 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 PANTHER PTHR12815:SF11 783 843 1.4E-203 T 22-04-2016 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 Pfam PF07244 Surface antigen variable number repeat 107 184 1.1E-15 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 Pfam PF07244 Surface antigen variable number repeat 189 275 2.2E-14 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 Pfam PF07244 Surface antigen variable number repeat 361 431 1.4E-12 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 Pfam PF07244 Surface antigen variable number repeat 278 357 5.3E-7 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 Gene3D G3DSA:2.40.160.50 796 838 7.2E-18 T 22-04-2016 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 Gene3D G3DSA:2.40.160.50 398 763 7.2E-18 T 22-04-2016 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 17 843 23.811 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 Pfam PF01103 Surface antigen 460 843 1.5E-93 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 PANTHER PTHR12815 601 764 1.4E-203 T 22-04-2016 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 PANTHER PTHR12815 23 573 1.4E-203 T 22-04-2016 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 PANTHER PTHR12815 783 843 1.4E-203 T 22-04-2016 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 41 843 1.1E-217 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 NHAM_RS08690 e3bdb6258a02fe3aac4b91b9450498d1 843 PIRSF PIRSF006076 4 843 4.4E-261 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 SMART SM00304 220 272 0.0011 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 SUPERFAMILY SSF55874 335 477 2.75E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 SMART SM00388 273 332 6.2E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 SMART SM00387 370 477 1.1E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 SUPERFAMILY SSF47384 257 333 1.55E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 476 2.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 Gene3D G3DSA:3.30.565.10 319 477 5.6E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 Gene3D G3DSA:1.10.287.130 266 318 3.5E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 1.7E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 432 1.7E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 418 1.7E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 PANTHER PTHR24423 214 477 1.1E-44 T 22-04-2016 NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 PANTHER PTHR24423 13 24 1.1E-44 T 22-04-2016 NHAM_RS16085 3576a4ef5f715d50eacfe3c19ff5cf85 477 Pfam PF00672 HAMP domain 202 268 3.0E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS08350 d8d4935f700570ec02011508c4f42851 80 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 78 7.5E-31 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS08350 d8d4935f700570ec02011508c4f42851 80 SUPERFAMILY SSF82697 1 78 3.66E-26 T 22-04-2016 NHAM_RS08350 d8d4935f700570ec02011508c4f42851 80 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 78 2.1E-24 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS08350 d8d4935f700570ec02011508c4f42851 80 PANTHER PTHR34696 1 78 5.8E-29 T 22-04-2016 NHAM_RS08350 d8d4935f700570ec02011508c4f42851 80 Gene3D G3DSA:3.30.1280.10 1 78 5.0E-33 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS08350 d8d4935f700570ec02011508c4f42851 80 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 78 3.0E-16 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS08350 d8d4935f700570ec02011508c4f42851 80 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 21.062 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 NHAM_RS07220 128da96414d63e7076efe746a6da1569 215 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 17 153 6.0E-33 T 22-04-2016 IPR006433 Prohead protease NHAM_RS07220 128da96414d63e7076efe746a6da1569 215 Gene3D G3DSA:3.20.16.10 19 100 8.6E-5 T 22-04-2016 NHAM_RS07220 128da96414d63e7076efe746a6da1569 215 SUPERFAMILY SSF50789 19 172 3.4E-8 T 22-04-2016 NHAM_RS07220 128da96414d63e7076efe746a6da1569 215 Pfam PF04586 Caudovirus prohead serine protease 17 151 7.3E-39 T 22-04-2016 IPR006433 Prohead protease NHAM_RS01835 c6254c102256a0f85a7f22942d61428a 345 PANTHER PTHR30482 1 332 5.3E-126 T 22-04-2016 NHAM_RS01835 c6254c102256a0f85a7f22942d61428a 345 PANTHER PTHR30482:SF5 1 332 5.3E-126 T 22-04-2016 NHAM_RS01835 c6254c102256a0f85a7f22942d61428a 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 313 1.9E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 PIRSF PIRSF002133 1 123 2.0E-53 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 PANTHER PTHR11652 1 116 7.0E-71 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.0E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.0E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.0E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.0E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.0E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.0E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 6.8E-67 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 Pfam PF00164 Ribosomal protein S12/S23 15 123 1.0E-41 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 SUPERFAMILY SSF50249 2 123 7.71E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.606 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07885 db462d43b0e7746e1dabaf529043a11a 123 Gene3D G3DSA:2.40.50.140 1 123 2.8E-64 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 SUPERFAMILY SSF51126 1194 1609 1.91E-16 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Gene3D G3DSA:2.160.20.20 665 1091 3.1E-6 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Gene3D G3DSA:2.160.20.20 1199 1501 8.4E-7 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 SMART SM00869 2130 2397 2.2E-50 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1292 1317 1.2E-5 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1556 1586 2.7E-8 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 531 551 1.7E-5 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1647 1676 5.9E-10 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1201 1225 2.1E-6 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 623 652 1.5E-8 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 713 744 1.3E-7 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1111 1133 1.4E-6 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 SUPERFAMILY SSF103515 2045 2072 1.16E-54 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 SUPERFAMILY SSF103515 2126 2407 1.16E-54 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 SUPERFAMILY SSF51126 376 693 4.08E-15 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Pfam PF12951 Passenger-associated-transport-repeat 531 551 3.0E-5 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Pfam PF12951 Passenger-associated-transport-repeat 1294 1316 8.9E-5 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Pfam PF12951 Passenger-associated-transport-repeat 1648 1675 2.1E-8 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Pfam PF12951 Passenger-associated-transport-repeat 1013 1039 1.7E-4 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Pfam PF12951 Passenger-associated-transport-repeat 1483 1501 0.0011 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Pfam PF12951 Passenger-associated-transport-repeat 714 744 4.3E-7 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Pfam PF12951 Passenger-associated-transport-repeat 1557 1584 1.3E-5 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Pfam PF12951 Passenger-associated-transport-repeat 1203 1225 7.7E-5 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Pfam PF12951 Passenger-associated-transport-repeat 623 652 7.3E-8 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Pfam PF12951 Passenger-associated-transport-repeat 1111 1133 3.1E-4 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 SUPERFAMILY SSF51126 1628 1961 2.35E-9 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 SUPERFAMILY SSF51126 691 1055 2.76E-18 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS24105 b882c356a87e33b2965b44ddce0ac055 2407 Gene3D G3DSA:2.40.128.130 2120 2407 5.5E-49 T 22-04-2016 IPR005546 Autotransporter beta-domain NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 344 38.73 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 PANTHER PTHR10055 3 347 1.2E-169 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 SUPERFAMILY SSF52374 4 343 2.89E-91 T 22-04-2016 NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 PANTHER PTHR10055:SF10 3 347 1.2E-169 T 22-04-2016 NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 Gene3D G3DSA:1.10.240.10 219 338 1.4E-18 T 22-04-2016 NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 Pfam PF00579 tRNA synthetases class I (W and Y) 3 284 7.3E-74 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 Gene3D G3DSA:3.40.50.620 3 218 1.6E-83 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 343 4.3E-91 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 4.3E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 4.3E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 4.3E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 NHAM_RS00060 d2116c82d5cafa9d17b65971c5f41089 347 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 208 218 4.3E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 NHAM_RS14290 13bb5ed9f5ced89ce40ada16dbf8d77d 692 PANTHER PTHR30461 15 579 3.8E-48 T 22-04-2016 NHAM_RS14290 13bb5ed9f5ced89ce40ada16dbf8d77d 692 Pfam PF07508 Recombinase 191 310 1.8E-13 T 22-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 NHAM_RS14290 13bb5ed9f5ced89ce40ada16dbf8d77d 692 PANTHER PTHR30461:SF3 15 579 3.8E-48 T 22-04-2016 NHAM_RS14290 13bb5ed9f5ced89ce40ada16dbf8d77d 692 Gene3D G3DSA:3.40.50.1390 15 147 2.6E-10 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS14290 13bb5ed9f5ced89ce40ada16dbf8d77d 692 Pfam PF00239 Resolvase, N terminal domain 15 166 6.1E-19 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS14290 13bb5ed9f5ced89ce40ada16dbf8d77d 692 SUPERFAMILY SSF53041 15 165 7.19E-19 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS14290 13bb5ed9f5ced89ce40ada16dbf8d77d 692 Pfam PF13408 Recombinase zinc beta ribbon domain 329 385 1.6E-8 T 22-04-2016 IPR025827 Recombinase zinc beta ribbon domain NHAM_RS14290 13bb5ed9f5ced89ce40ada16dbf8d77d 692 SMART SM00857 15 167 8.4E-26 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 PANTHER PTHR12383 12 66 1.3E-58 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 PANTHER PTHR12383 84 254 1.3E-58 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 Pfam PF00717 Peptidase S24-like 40 129 6.3E-21 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 183 202 2.6E-23 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 105 117 2.6E-23 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 34 50 2.6E-23 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 PANTHER PTHR12383:SF14 12 66 1.3E-58 T 22-04-2016 NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 PANTHER PTHR12383:SF14 84 254 1.3E-58 T 22-04-2016 NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 ProSitePatterns PS00760 Signal peptidases I lysine active site. 107 119 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 ProSitePatterns PS00501 Signal peptidases I serine active site. 43 50 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 ProSitePatterns PS00761 Signal peptidases I signature 3. 188 201 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 Gene3D G3DSA:2.10.109.10 183 230 1.1E-38 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 Gene3D G3DSA:2.10.109.10 34 115 1.1E-38 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 SUPERFAMILY SSF51306 35 253 3.14E-56 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NHAM_RS01270 00319f65f9cb6bea84bd7fffc10c188f 255 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 20 228 6.5E-42 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NHAM_RS12605 9ed0b95d4ec5ea873a975d1a2bd48063 85 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 20 67 3.0E-6 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 NHAM_RS18915 4893ffe2d815a4db94175a52d7e74366 203 Pfam PF05233 PHB accumulation regulatory domain 74 113 6.5E-19 T 22-04-2016 IPR007897 PHB accumulation regulatory NHAM_RS18915 4893ffe2d815a4db94175a52d7e74366 203 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 9 68 3.1E-30 T 22-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal NHAM_RS18915 4893ffe2d815a4db94175a52d7e74366 203 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 10 115 8.1E-46 T 22-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR NHAM_RS14830 b31baeea2e021213e1a11899c56e9d09 158 SUPERFAMILY SSF53955 13 135 1.63E-28 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS14830 b31baeea2e021213e1a11899c56e9d09 158 Gene3D G3DSA:1.10.530.10 27 141 1.7E-25 T 22-04-2016 NHAM_RS14830 b31baeea2e021213e1a11899c56e9d09 158 PANTHER PTHR21666 12 146 1.1E-21 T 22-04-2016 NHAM_RS14830 b31baeea2e021213e1a11899c56e9d09 158 Pfam PF01464 Transglycosylase SLT domain 33 138 2.5E-18 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 NHAM_RS03875 c728a57a59aa08c150fb34ebd480290e 152 PANTHER PTHR30558 1 144 1.2E-62 T 22-04-2016 NHAM_RS03875 c728a57a59aa08c150fb34ebd480290e 152 PANTHER PTHR30558:SF9 1 144 1.2E-62 T 22-04-2016 NHAM_RS03875 c728a57a59aa08c150fb34ebd480290e 152 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 134 1.9E-24 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NHAM_RS03875 c728a57a59aa08c150fb34ebd480290e 152 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 18 137 3.2E-57 T 22-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 NHAM_RS15610 942d1178282fce742e1013ce57b0a95f 264 PANTHER PTHR34136 2 261 2.7E-77 T 22-04-2016 NHAM_RS15610 942d1178282fce742e1013ce57b0a95f 264 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 57 226 1.5E-42 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 NHAM_RS15610 942d1178282fce742e1013ce57b0a95f 264 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 58 225 1.5E-56 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 NHAM_RS11170 ab6cb1b81281e0cd4df0571ff0fd94c0 232 SMART SM00382 39 227 4.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS11170 ab6cb1b81281e0cd4df0571ff0fd94c0 232 PANTHER PTHR24220 12 230 5.5E-88 T 22-04-2016 NHAM_RS11170 ab6cb1b81281e0cd4df0571ff0fd94c0 232 SUPERFAMILY SSF52540 11 231 3.04E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11170 ab6cb1b81281e0cd4df0571ff0fd94c0 232 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS11170 ab6cb1b81281e0cd4df0571ff0fd94c0 232 PANTHER PTHR24220:SF111 12 230 5.5E-88 T 22-04-2016 NHAM_RS11170 ab6cb1b81281e0cd4df0571ff0fd94c0 232 Pfam PF00005 ABC transporter 30 178 1.7E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS11170 ab6cb1b81281e0cd4df0571ff0fd94c0 232 Gene3D G3DSA:3.40.50.300 10 230 4.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00090 737e690a861fbee7bd2212868b46faa2 160 Pfam PF00583 Acetyltransferase (GNAT) family 62 132 3.8E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS00090 737e690a861fbee7bd2212868b46faa2 160 Gene3D G3DSA:3.40.630.30 14 159 1.3E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS00090 737e690a861fbee7bd2212868b46faa2 160 PANTHER PTHR23091:SF122 13 160 1.2E-20 T 22-04-2016 NHAM_RS00090 737e690a861fbee7bd2212868b46faa2 160 SUPERFAMILY SSF55729 14 159 7.15E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS00090 737e690a861fbee7bd2212868b46faa2 160 PANTHER PTHR23091 13 160 1.2E-20 T 22-04-2016 NHAM_RS12195 fd480ef1b95a79e9c6351f6b07be34f8 351 SUPERFAMILY SSF52096 5 168 1.79E-38 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS12195 fd480ef1b95a79e9c6351f6b07be34f8 351 PANTHER PTHR10381 1 179 2.4E-33 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NHAM_RS12195 fd480ef1b95a79e9c6351f6b07be34f8 351 PANTHER PTHR10381:SF23 1 179 2.4E-33 T 22-04-2016 NHAM_RS12195 fd480ef1b95a79e9c6351f6b07be34f8 351 Gene3D G3DSA:3.90.226.10 5 169 7.9E-35 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS12195 fd480ef1b95a79e9c6351f6b07be34f8 351 PRINTS PR00127 Clp protease catalytic subunit P signature 41 61 2.0E-6 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NHAM_RS12195 fd480ef1b95a79e9c6351f6b07be34f8 351 PRINTS PR00127 Clp protease catalytic subunit P signature 72 89 2.0E-6 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NHAM_RS12195 fd480ef1b95a79e9c6351f6b07be34f8 351 PRINTS PR00127 Clp protease catalytic subunit P signature 148 167 2.0E-6 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NHAM_RS12195 fd480ef1b95a79e9c6351f6b07be34f8 351 Pfam PF00574 Clp protease 28 168 1.9E-27 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NHAM_RS12880 5a404223fc95b203b2449c6eaa869eaf 74 SMART SM00530 11 66 6.1E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS12880 5a404223fc95b203b2449c6eaa869eaf 74 Gene3D G3DSA:1.10.260.40 3 71 4.2E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS12880 5a404223fc95b203b2449c6eaa869eaf 74 SUPERFAMILY SSF47413 3 70 7.78E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS12880 5a404223fc95b203b2449c6eaa869eaf 74 Pfam PF01381 Helix-turn-helix 12 64 9.0E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS06545 aab034d7fb84a7cc57c9a7e6bddf18eb 340 PANTHER PTHR23132 1 322 1.5E-69 T 22-04-2016 NHAM_RS06545 aab034d7fb84a7cc57c9a7e6bddf18eb 340 Gene3D G3DSA:3.30.1490.20 127 196 2.7E-6 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS06545 aab034d7fb84a7cc57c9a7e6bddf18eb 340 SUPERFAMILY SSF52440 1 121 1.15E-18 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS06545 aab034d7fb84a7cc57c9a7e6bddf18eb 340 Pfam PF01820 D-ala D-ala ligase N-terminus 2 112 4.0E-13 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS06545 aab034d7fb84a7cc57c9a7e6bddf18eb 340 SUPERFAMILY SSF56059 122 317 2.42E-38 T 22-04-2016 NHAM_RS06545 aab034d7fb84a7cc57c9a7e6bddf18eb 340 Gene3D G3DSA:3.30.470.20 113 126 4.4E-39 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS06545 aab034d7fb84a7cc57c9a7e6bddf18eb 340 Gene3D G3DSA:3.30.470.20 198 320 4.4E-39 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS06545 aab034d7fb84a7cc57c9a7e6bddf18eb 340 Gene3D G3DSA:3.40.50.20 1 111 6.8E-14 T 22-04-2016 IPR016185 Pre-ATP-grasp domain NHAM_RS06545 aab034d7fb84a7cc57c9a7e6bddf18eb 340 PANTHER PTHR23132:SF0 1 322 1.5E-69 T 22-04-2016 NHAM_RS06545 aab034d7fb84a7cc57c9a7e6bddf18eb 340 Pfam PF07478 D-ala D-ala ligase C-terminus 156 316 1.3E-34 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 NHAM_RS17065 720a96fb3ee153af21aa73620573f277 478 PANTHER PTHR35861 218 465 1.2E-30 T 22-04-2016 NHAM_RS17065 720a96fb3ee153af21aa73620573f277 478 PANTHER PTHR35861:SF1 218 465 1.2E-30 T 22-04-2016 NHAM_RS17065 720a96fb3ee153af21aa73620573f277 478 Pfam PF04984 Phage tail sheath protein 6 452 2.1E-27 T 22-04-2016 IPR007067 Tail sheath protein NHAM_RS03610 012743db5adde37735d753cd2aa268ab 212 SUPERFAMILY SSF53335 10 205 7.21E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS03610 012743db5adde37735d753cd2aa268ab 212 PANTHER PTHR10108 10 183 2.0E-30 T 22-04-2016 NHAM_RS03610 012743db5adde37735d753cd2aa268ab 212 Gene3D G3DSA:3.40.50.150 10 188 1.1E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS03610 012743db5adde37735d753cd2aa268ab 212 PANTHER PTHR10108:SF805 10 183 2.0E-30 T 22-04-2016 NHAM_RS03610 012743db5adde37735d753cd2aa268ab 212 Pfam PF08241 Methyltransferase domain 48 144 8.1E-22 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NHAM_RS09645 867d47e0a81ad40663e88b5bdbeb33a7 399 PANTHER PTHR30097:SF4 46 399 1.2E-72 T 22-04-2016 NHAM_RS09645 867d47e0a81ad40663e88b5bdbeb33a7 399 PANTHER PTHR30097 46 399 1.2E-72 T 22-04-2016 NHAM_RS09645 867d47e0a81ad40663e88b5bdbeb33a7 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 316 7.9E-42 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS09645 867d47e0a81ad40663e88b5bdbeb33a7 399 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 67 388 1.2E-40 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS09645 867d47e0a81ad40663e88b5bdbeb33a7 399 SUPERFAMILY SSF111369 88 320 6.15E-19 T 22-04-2016 NHAM_RS09645 867d47e0a81ad40663e88b5bdbeb33a7 399 Gene3D G3DSA:2.40.50.100 209 235 6.4E-9 T 22-04-2016 NHAM_RS09645 867d47e0a81ad40663e88b5bdbeb33a7 399 Gene3D G3DSA:2.40.50.100 92 124 6.4E-9 T 22-04-2016 NHAM_RS02235 68118f45a7942418cb14e4ce914d9d63 218 Pfam PF02974 Protease inhibitor Inh 18 107 6.0E-20 T 22-04-2016 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 NHAM_RS02235 68118f45a7942418cb14e4ce914d9d63 218 Pfam PF02974 Protease inhibitor Inh 124 217 5.1E-14 T 22-04-2016 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 NHAM_RS02235 68118f45a7942418cb14e4ce914d9d63 218 SUPERFAMILY SSF50882 121 217 1.49E-27 T 22-04-2016 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 NHAM_RS02235 68118f45a7942418cb14e4ce914d9d63 218 SUPERFAMILY SSF50882 19 114 1.15E-20 T 22-04-2016 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 NHAM_RS02235 68118f45a7942418cb14e4ce914d9d63 218 Gene3D G3DSA:2.40.128.10 19 115 6.3E-9 T 22-04-2016 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 NHAM_RS02235 68118f45a7942418cb14e4ce914d9d63 218 Gene3D G3DSA:2.40.128.10 124 217 8.3E-11 T 22-04-2016 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 NHAM_RS18490 ee9fbea7c262ed67c5241eebb16da8c1 292 PANTHER PTHR22576 59 292 1.1E-71 T 22-04-2016 NHAM_RS18490 ee9fbea7c262ed67c5241eebb16da8c1 292 Pfam PF00656 Caspase domain 59 274 2.6E-29 T 22-04-2016 NHAM_RS18490 ee9fbea7c262ed67c5241eebb16da8c1 292 Gene3D G3DSA:3.40.50.1460 52 192 1.3E-12 T 22-04-2016 IPR029030 Caspase-like domain NHAM_RS18490 ee9fbea7c262ed67c5241eebb16da8c1 292 SUPERFAMILY SSF52129 51 279 3.14E-44 T 22-04-2016 IPR029030 Caspase-like domain NHAM_RS05265 e4296cafffabb24b1ce28abd9226ee61 290 Gene3D G3DSA:2.40.10.10 34 105 6.6E-4 T 22-04-2016 NHAM_RS05265 e4296cafffabb24b1ce28abd9226ee61 290 Pfam PF13180 PDZ domain 202 283 1.1E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS05265 e4296cafffabb24b1ce28abd9226ee61 290 Pfam PF13365 Trypsin-like peptidase domain 36 168 8.9E-8 T 22-04-2016 NHAM_RS05265 e4296cafffabb24b1ce28abd9226ee61 290 SMART SM00228 201 275 1.5E-5 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS05265 e4296cafffabb24b1ce28abd9226ee61 290 PANTHER PTHR22939 42 288 2.1E-25 T 22-04-2016 NHAM_RS05265 e4296cafffabb24b1ce28abd9226ee61 290 PANTHER PTHR22939:SF77 42 288 2.1E-25 T 22-04-2016 NHAM_RS05265 e4296cafffabb24b1ce28abd9226ee61 290 PRINTS PR00834 HtrA/DegQ protease family signature 64 84 2.6E-6 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS05265 e4296cafffabb24b1ce28abd9226ee61 290 PRINTS PR00834 HtrA/DegQ protease family signature 233 245 2.6E-6 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS05265 e4296cafffabb24b1ce28abd9226ee61 290 Gene3D G3DSA:2.30.42.10 203 288 6.7E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS05265 e4296cafffabb24b1ce28abd9226ee61 290 Gene3D G3DSA:2.40.10.10 106 202 2.6E-4 T 22-04-2016 NHAM_RS05265 e4296cafffabb24b1ce28abd9226ee61 290 SUPERFAMILY SSF50494 9 198 1.62E-17 T 22-04-2016 IPR009003 Peptidase S1, PA clan NHAM_RS05265 e4296cafffabb24b1ce28abd9226ee61 290 SUPERFAMILY SSF50156 188 284 1.45E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS02025 f4f709aebb23f0c1d1549817ff99c046 475 Gene3D G3DSA:3.40.50.300 216 433 1.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02025 f4f709aebb23f0c1d1549817ff99c046 475 SUPERFAMILY SSF52540 99 411 2.03E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02025 f4f709aebb23f0c1d1549817ff99c046 475 Pfam PF00437 Type II/IV secretion system protein 119 394 3.0E-80 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 NHAM_RS02025 f4f709aebb23f0c1d1549817ff99c046 475 PANTHER PTHR30258:SF3 45 462 1.8E-146 T 22-04-2016 NHAM_RS02025 f4f709aebb23f0c1d1549817ff99c046 475 Gene3D G3DSA:3.30.450.90 115 212 4.2E-36 T 22-04-2016 NHAM_RS02025 f4f709aebb23f0c1d1549817ff99c046 475 PANTHER PTHR30258 45 462 1.8E-146 T 22-04-2016 NHAM_RS08855 505c500d5cdca969b26b245a749fdd87 171 Gene3D G3DSA:3.30.70.640 10 163 7.3E-67 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 NHAM_RS08855 505c500d5cdca969b26b245a749fdd87 171 PANTHER PTHR22960 7 165 5.4E-92 T 22-04-2016 NHAM_RS08855 505c500d5cdca969b26b245a749fdd87 171 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 11 159 7.2E-60 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 NHAM_RS08855 505c500d5cdca969b26b245a749fdd87 171 SUPERFAMILY SSF55040 18 162 5.1E-60 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 NHAM_RS08855 505c500d5cdca969b26b245a749fdd87 171 Pfam PF01967 MoaC family 22 157 2.7E-54 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 NHAM_RS08855 505c500d5cdca969b26b245a749fdd87 171 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 9 165 36.216 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 NHAM_RS05430 18ff699da3567e0a8ccf77bcfc54c920 451 Pfam PF12000 Gkycosyl transferase family 4 group 28 192 2.5E-56 T 22-04-2016 IPR022623 Domain of unknown function DUF3495 NHAM_RS05430 18ff699da3567e0a8ccf77bcfc54c920 451 Pfam PF00534 Glycosyl transferases group 1 212 381 8.2E-17 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 NHAM_RS05430 18ff699da3567e0a8ccf77bcfc54c920 451 Gene3D G3DSA:3.40.50.2000 178 381 1.1E-16 T 22-04-2016 NHAM_RS05430 18ff699da3567e0a8ccf77bcfc54c920 451 SUPERFAMILY SSF53756 16 392 1.44E-43 T 22-04-2016 NHAM_RS05430 18ff699da3567e0a8ccf77bcfc54c920 451 PANTHER PTHR12526 54 125 1.8E-25 T 22-04-2016 NHAM_RS05430 18ff699da3567e0a8ccf77bcfc54c920 451 PANTHER PTHR12526 1 36 1.8E-25 T 22-04-2016 NHAM_RS05430 18ff699da3567e0a8ccf77bcfc54c920 451 PANTHER PTHR12526 147 393 1.8E-25 T 22-04-2016 NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 8 439 8.5E-146 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 Gene3D G3DSA:2.160.10.10 319 438 5.6E-35 T 22-04-2016 NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 438 37.285 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 270 300 8.5E-7 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 381 415 6.2E-8 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 305 335 9.5E-5 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 SUPERFAMILY SSF53448 8 255 4.59E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 Gene3D G3DSA:3.90.550.10 7 250 7.8E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 Pfam PF12804 MobA-like NTP transferase domain 9 137 3.4E-18 T 22-04-2016 IPR025877 MobA-like NTP transferase NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 PANTHER PTHR22572 7 435 4.9E-174 T 22-04-2016 NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 PANTHER PTHR22572:SF115 7 435 4.9E-174 T 22-04-2016 NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 Gene3D G3DSA:2.160.10.10 258 318 2.1E-9 T 22-04-2016 NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 SUPERFAMILY SSF51161 253 433 6.88E-49 T 22-04-2016 IPR011004 Trimeric LpxA-like NHAM_RS09120 a4806c2bc3f5c3f13bfc331f46f324b0 452 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 389 417 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 NHAM_RS16870 56b5698b03539176aa91aebc9b0f5848 221 SUPERFAMILY SSF52172 1 175 2.13E-35 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS16870 56b5698b03539176aa91aebc9b0f5848 221 Gene3D G3DSA:3.40.50.2300 1 123 4.7E-34 T 22-04-2016 NHAM_RS16870 56b5698b03539176aa91aebc9b0f5848 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 215 5.2E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS16870 56b5698b03539176aa91aebc9b0f5848 221 PANTHER PTHR26402 1 216 2.7E-76 T 22-04-2016 NHAM_RS16870 56b5698b03539176aa91aebc9b0f5848 221 Gene3D G3DSA:1.10.10.10 124 216 2.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS16870 56b5698b03539176aa91aebc9b0f5848 221 SMART SM00448 1 112 8.2E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS16870 56b5698b03539176aa91aebc9b0f5848 221 Pfam PF00072 Response regulator receiver domain 4 113 8.4E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS16870 56b5698b03539176aa91aebc9b0f5848 221 PANTHER PTHR26402:SF279 1 216 2.7E-76 T 22-04-2016 NHAM_RS16870 56b5698b03539176aa91aebc9b0f5848 221 SMART SM00862 145 216 8.2E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS06495 90e4b0fe5fcc2b4800a8cea926f645fb 580 Pfam PF00905 Penicillin binding protein transpeptidase domain 252 530 4.6E-54 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NHAM_RS06495 90e4b0fe5fcc2b4800a8cea926f645fb 580 PANTHER PTHR30627:SF1 25 580 9.5E-148 T 22-04-2016 NHAM_RS06495 90e4b0fe5fcc2b4800a8cea926f645fb 580 SUPERFAMILY SSF56519 76 201 1.96E-29 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NHAM_RS06495 90e4b0fe5fcc2b4800a8cea926f645fb 580 PANTHER PTHR30627 25 580 9.5E-148 T 22-04-2016 NHAM_RS06495 90e4b0fe5fcc2b4800a8cea926f645fb 580 Pfam PF03717 Penicillin-binding Protein dimerisation domain 78 186 1.1E-9 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NHAM_RS06495 90e4b0fe5fcc2b4800a8cea926f645fb 580 Gene3D G3DSA:3.90.1310.10 146 201 1.7E-11 T 22-04-2016 NHAM_RS06495 90e4b0fe5fcc2b4800a8cea926f645fb 580 SUPERFAMILY SSF56601 224 561 1.02E-75 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS06495 90e4b0fe5fcc2b4800a8cea926f645fb 580 Gene3D G3DSA:3.40.710.10 225 554 2.2E-69 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS17095 7483c45b169a0a1b1a30ad0c7219484e 303 PANTHER PTHR35862:SF1 7 284 1.8E-35 T 22-04-2016 NHAM_RS17095 7483c45b169a0a1b1a30ad0c7219484e 303 PIRSF PIRSF020481 4 303 1.9E-60 T 22-04-2016 IPR014507 Baseplate assembly protein J, predicted NHAM_RS17095 7483c45b169a0a1b1a30ad0c7219484e 303 PANTHER PTHR35862 7 284 1.8E-35 T 22-04-2016 NHAM_RS17095 7483c45b169a0a1b1a30ad0c7219484e 303 Pfam PF04865 Baseplate J-like protein 121 262 3.4E-16 T 22-04-2016 IPR006949 Baseplate protein J-like NHAM_RS18365 7adbe566b6cbad67e007258f6fbeb5a1 173 Pfam PF01782 RimM N-terminal domain 6 85 2.5E-20 T 22-04-2016 IPR002676 RimM protein GO:0006364 NHAM_RS18365 7adbe566b6cbad67e007258f6fbeb5a1 173 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 165 23.455 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 NHAM_RS18365 7adbe566b6cbad67e007258f6fbeb5a1 173 PANTHER PTHR33692 1 165 1.3E-44 T 22-04-2016 NHAM_RS18365 7adbe566b6cbad67e007258f6fbeb5a1 173 Gene3D G3DSA:2.30.30.240 95 163 5.7E-18 T 22-04-2016 NHAM_RS18365 7adbe566b6cbad67e007258f6fbeb5a1 173 Pfam PF05239 PRC-barrel domain 92 161 1.1E-7 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS18365 7adbe566b6cbad67e007258f6fbeb5a1 173 SUPERFAMILY SSF50447 5 88 8.12E-19 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain NHAM_RS18365 7adbe566b6cbad67e007258f6fbeb5a1 173 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 162 3.7E-44 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 NHAM_RS18365 7adbe566b6cbad67e007258f6fbeb5a1 173 SUPERFAMILY SSF50346 95 163 5.89E-17 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS18365 7adbe566b6cbad67e007258f6fbeb5a1 173 Gene3D G3DSA:2.40.30.60 3 89 4.4E-24 T 22-04-2016 IPR002676 RimM protein GO:0006364 NHAM_RS02420 c53f514eec1374bf240eabad24e495ad 246 PANTHER PTHR10108 85 226 8.4E-25 T 22-04-2016 NHAM_RS02420 c53f514eec1374bf240eabad24e495ad 246 PANTHER PTHR10108:SF820 85 226 8.4E-25 T 22-04-2016 NHAM_RS02420 c53f514eec1374bf240eabad24e495ad 246 SUPERFAMILY SSF53335 84 214 2.2E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS02420 c53f514eec1374bf240eabad24e495ad 246 Gene3D G3DSA:3.40.50.150 89 214 4.6E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS02420 c53f514eec1374bf240eabad24e495ad 246 Pfam PF08241 Methyltransferase domain 87 129 4.7E-7 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NHAM_RS10570 6c344a574db17289631c529e76631dff 706 PANTHER PTHR32282:SF0 9 579 1.4E-163 T 22-04-2016 NHAM_RS10570 6c344a574db17289631c529e76631dff 706 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 620 703 1.0E-16 T 22-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 NHAM_RS10570 6c344a574db17289631c529e76631dff 706 SUPERFAMILY SSF56601 273 589 2.62E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS10570 6c344a574db17289631c529e76631dff 706 SUPERFAMILY SSF56601 226 246 2.62E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS10570 6c344a574db17289631c529e76631dff 706 Pfam PF00905 Penicillin binding protein transpeptidase domain 320 481 1.4E-16 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NHAM_RS10570 6c344a574db17289631c529e76631dff 706 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 47 590 1.4E-218 T 22-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 NHAM_RS10570 6c344a574db17289631c529e76631dff 706 PANTHER PTHR32282 9 579 1.4E-163 T 22-04-2016 NHAM_RS10570 6c344a574db17289631c529e76631dff 706 Gene3D G3DSA:3.40.710.10 245 585 8.5E-64 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS10570 6c344a574db17289631c529e76631dff 706 Pfam PF00912 Transglycosylase 74 242 1.7E-46 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 NHAM_RS10570 6c344a574db17289631c529e76631dff 706 Gene3D G3DSA:1.10.3810.10 86 244 1.6E-50 T 22-04-2016 NHAM_RS10570 6c344a574db17289631c529e76631dff 706 SUPERFAMILY SSF53955 54 275 3.66E-63 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS18200 173e276453872e2ebf1698752581ff7d 63 Pfam PF06698 Protein of unknown function (DUF1192) 5 62 2.1E-26 T 22-04-2016 IPR009579 Protein of unknown function DUF1192 NHAM_RS23875 117913974f562aa945f690208fecbed3 896 Pfam PF13699 Domain of unknown function (DUF4157) 74 151 1.7E-28 T 22-04-2016 IPR025295 Domain of unknown function DUF4157 NHAM_RS23875 117913974f562aa945f690208fecbed3 896 Pfam PF15500 Putative RNase-like toxin, toxin_1 586 681 2.7E-46 T 22-04-2016 IPR029137 Putative RNase-like toxin, toxin1 NHAM_RS00225 19fd92ee6490cc22859469357cfd73d2 266 Gene3D G3DSA:3.40.50.720 3 252 4.1E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00225 19fd92ee6490cc22859469357cfd73d2 266 PANTHER PTHR10953:SF153 2 259 1.1E-97 T 22-04-2016 NHAM_RS00225 19fd92ee6490cc22859469357cfd73d2 266 SUPERFAMILY SSF69572 2 259 3.01E-81 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 NHAM_RS00225 19fd92ee6490cc22859469357cfd73d2 266 PANTHER PTHR10953 2 259 1.1E-97 T 22-04-2016 NHAM_RS00225 19fd92ee6490cc22859469357cfd73d2 266 Pfam PF00899 ThiF family 10 249 1.9E-60 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 NHAM_RS06240 e8f41366394de5ff820fa1f6c0fd4679 89 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 16 87 1.1E-35 T 22-04-2016 IPR018753 Azospirillum phage Cd, Gp10 NHAM_RS06240 e8f41366394de5ff820fa1f6c0fd4679 89 Hamap MF_00797 UPF0335 protein . 11 88 23.131 T 22-04-2016 IPR018753 Azospirillum phage Cd, Gp10 NHAM_RS02045 a0b83d08f5effd9fed31806e512b106e 260 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 6 245 2.0E-79 T 22-04-2016 IPR017592 Pilus assembly, Flp-type CpaB NHAM_RS02045 a0b83d08f5effd9fed31806e512b106e 260 Pfam PF08666 SAF domain 42 105 3.7E-8 T 22-04-2016 IPR013974 SAF domain NHAM_RS02045 a0b83d08f5effd9fed31806e512b106e 260 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 115 225 6.5E-33 T 22-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain NHAM_RS02045 a0b83d08f5effd9fed31806e512b106e 260 SMART SM00858 41 109 1.6E-11 T 22-04-2016 IPR013974 SAF domain NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PRINTS PR01183 Ribonucleotide reductase large chain signature 275 294 2.1E-5 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PRINTS PR01183 Ribonucleotide reductase large chain signature 543 565 2.1E-5 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 Pfam PF02867 Ribonucleotide reductase, barrel domain 812 913 3.0E-17 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 Pfam PF02867 Ribonucleotide reductase, barrel domain 198 749 7.9E-104 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 130 752 5.5E-139 T 22-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 Gene3D G3DSA:1.10.10.200 300 370 0.001 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 SUPERFAMILY SSF75625 296 394 1.83E-11 T 22-04-2016 IPR029072 YebC-like NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 Gene3D G3DSA:3.20.70.20 664 710 1.3E-93 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 Gene3D G3DSA:3.20.70.20 101 299 1.3E-93 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 Gene3D G3DSA:3.20.70.20 41 65 1.3E-93 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 Gene3D G3DSA:3.20.70.20 872 918 1.3E-93 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 Gene3D G3DSA:3.20.70.20 390 591 1.3E-93 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573 836 938 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573 961 1122 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573 642 747 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573 15 160 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573 191 308 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573 1216 1263 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573 399 617 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 31 147 1.2E-41 T 22-04-2016 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 SUPERFAMILY SSF51998 841 925 4.58E-122 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 SUPERFAMILY SSF51998 197 302 4.58E-122 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 SUPERFAMILY SSF51998 394 716 4.58E-122 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573:SF18 836 938 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573:SF18 961 1122 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573:SF18 642 747 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573:SF18 15 160 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573:SF18 191 308 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573:SF18 1216 1263 0.0 T 22-04-2016 NHAM_RS10605 7a84b7801c79706a7d2504557d3a2d65 1263 PANTHER PTHR11573:SF18 399 617 0.0 T 22-04-2016 NHAM_RS18140 24fdfc378778c42edc26da65aa671ee4 233 SUPERFAMILY SSF51391 11 203 4.05E-26 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 NHAM_RS18140 24fdfc378778c42edc26da65aa671ee4 233 Gene3D G3DSA:3.20.20.70 9 211 4.5E-21 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS18140 24fdfc378778c42edc26da65aa671ee4 233 Pfam PF02581 Thiamine monophosphate synthase/TENI 14 184 1.0E-14 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 SUPERFAMILY SSF64153 1 238 2.49E-59 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 201 23.726 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 228 488 4.8E-52 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 Gene3D G3DSA:3.40.50.10260 1 223 2.1E-61 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 Pfam PF01256 Carbohydrate kinase 240 471 1.7E-51 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 PANTHER PTHR12592:SF0 1 497 5.2E-115 T 22-04-2016 NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 Gene3D G3DSA:3.40.1190.20 224 491 1.4E-80 T 22-04-2016 IPR029056 Ribokinase-like NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 216 493 18.376 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 SUPERFAMILY SSF53613 214 491 1.38E-63 T 22-04-2016 IPR029056 Ribokinase-like NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 433 443 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 PANTHER PTHR12592 1 497 5.2E-115 T 22-04-2016 NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 3 201 1.6E-35 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 PIRSF PIRSF017184 1 494 6.6E-108 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 NHAM_RS11375 0e236bb262a997b23f043ba281d4fa6c 499 Pfam PF03853 YjeF-related protein N-terminus 25 179 1.7E-36 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NHAM_RS06115 30cf6ddef02f366a11ae108b631f42bd 220 Gene3D G3DSA:3.40.50.1000 95 213 5.1E-28 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS06115 30cf6ddef02f366a11ae108b631f42bd 220 Gene3D G3DSA:3.40.50.1000 12 24 5.1E-28 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS06115 30cf6ddef02f366a11ae108b631f42bd 220 PANTHER PTHR18901 12 214 1.1E-36 T 22-04-2016 NHAM_RS06115 30cf6ddef02f366a11ae108b631f42bd 220 SUPERFAMILY SSF56784 12 217 8.81E-36 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS06115 30cf6ddef02f366a11ae108b631f42bd 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 190 9.6E-26 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS15875 91421875376bb23365238bd2307b6b29 375 PANTHER PTHR12049 2 350 3.4E-123 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA NHAM_RS15875 91421875376bb23365238bd2307b6b29 375 SUPERFAMILY SSF53335 11 363 2.17E-113 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS15875 91421875376bb23365238bd2307b6b29 375 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 64 298 5.7E-69 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA NHAM_RS15875 91421875376bb23365238bd2307b6b29 375 PANTHER PTHR12049:SF7 2 350 3.4E-123 T 22-04-2016 NHAM_RS23885 4d7c4109eb05bceaf937a74cd944fb37 113 Pfam PF06776 Invasion associated locus B (IalB) protein 4 96 4.0E-18 T 22-04-2016 IPR010642 Invasion protein B NHAM_RS05145 fd8f70b2fe6fc9262c565bbd4c17db9e 535 PANTHER PTHR22773 2 524 4.0E-114 T 22-04-2016 NHAM_RS05145 fd8f70b2fe6fc9262c565bbd4c17db9e 535 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 8.7E-5 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NHAM_RS05145 fd8f70b2fe6fc9262c565bbd4c17db9e 535 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 8.7E-5 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NHAM_RS05145 fd8f70b2fe6fc9262c565bbd4c17db9e 535 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 380 406 8.7E-5 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NHAM_RS05145 fd8f70b2fe6fc9262c565bbd4c17db9e 535 Pfam PF00361 Proton-conducting membrane transporter 130 430 3.3E-38 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NHAM_RS05145 fd8f70b2fe6fc9262c565bbd4c17db9e 535 PANTHER PTHR22773:SF49 2 524 4.0E-114 T 22-04-2016 NHAM_RS08800 a21bef93db3e3ca3a7f3604b13b525f0 100 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 5 94 4.2E-9 T 22-04-2016 IPR006450 Phage protein of unkonwn function NHAM_RS08800 a21bef93db3e3ca3a7f3604b13b525f0 100 Pfam PF05135 Phage gp6-like head-tail connector protein 4 94 5.6E-21 T 22-04-2016 IPR021146 Phage gp6-like head-tail connector protein NHAM_RS11155 9b81413ad9910d7967740f7a39bac65e 146 PANTHER PTHR26402 5 132 3.9E-28 T 22-04-2016 NHAM_RS11155 9b81413ad9910d7967740f7a39bac65e 146 Pfam PF00072 Response regulator receiver domain 7 129 2.0E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS11155 9b81413ad9910d7967740f7a39bac65e 146 SMART SM00448 5 129 1.1E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS11155 9b81413ad9910d7967740f7a39bac65e 146 Gene3D G3DSA:3.40.50.2300 3 132 2.3E-30 T 22-04-2016 NHAM_RS11155 9b81413ad9910d7967740f7a39bac65e 146 SUPERFAMILY SSF52172 4 132 1.57E-25 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS11655 1d0834b4f54b5326ed682e1ccd9b41c7 416 Pfam PF02353 Mycolic acid cyclopropane synthetase 114 376 5.0E-90 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS11655 1d0834b4f54b5326ed682e1ccd9b41c7 416 PIRSF PIRSF003085 2 398 1.3E-129 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 NHAM_RS11655 1d0834b4f54b5326ed682e1ccd9b41c7 416 Gene3D G3DSA:3.40.50.150 113 381 6.7E-89 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS11655 1d0834b4f54b5326ed682e1ccd9b41c7 416 SUPERFAMILY SSF53335 121 381 2.26E-73 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS11655 1d0834b4f54b5326ed682e1ccd9b41c7 416 PANTHER PTHR10108 49 297 1.6E-130 T 22-04-2016 NHAM_RS11655 1d0834b4f54b5326ed682e1ccd9b41c7 416 PANTHER PTHR10108 314 395 1.6E-130 T 22-04-2016 NHAM_RS11655 1d0834b4f54b5326ed682e1ccd9b41c7 416 PANTHER PTHR10108:SF743 49 297 1.6E-130 T 22-04-2016 NHAM_RS11655 1d0834b4f54b5326ed682e1ccd9b41c7 416 PANTHER PTHR10108:SF743 314 395 1.6E-130 T 22-04-2016 NHAM_RS03200 852ac9c51cdf06d79af6a93d386e0c92 388 Pfam PF13533 Biotin-lipoyl like 82 128 3.3E-16 T 22-04-2016 NHAM_RS03200 852ac9c51cdf06d79af6a93d386e0c92 388 SUPERFAMILY SSF111369 217 302 2.48E-18 T 22-04-2016 NHAM_RS03200 852ac9c51cdf06d79af6a93d386e0c92 388 SUPERFAMILY SSF111369 79 136 2.48E-18 T 22-04-2016 NHAM_RS03200 852ac9c51cdf06d79af6a93d386e0c92 388 SUPERFAMILY SSF111369 165 181 2.48E-18 T 22-04-2016 NHAM_RS03200 852ac9c51cdf06d79af6a93d386e0c92 388 PANTHER PTHR30386 34 382 2.1E-114 T 22-04-2016 NHAM_RS03200 852ac9c51cdf06d79af6a93d386e0c92 388 Gene3D G3DSA:2.40.50.100 81 114 1.9E-20 T 22-04-2016 NHAM_RS03200 852ac9c51cdf06d79af6a93d386e0c92 388 Gene3D G3DSA:2.40.50.100 238 271 1.9E-20 T 22-04-2016 NHAM_RS03200 852ac9c51cdf06d79af6a93d386e0c92 388 Pfam PF13437 HlyD family secretion protein 241 342 9.6E-14 T 22-04-2016 NHAM_RS03200 852ac9c51cdf06d79af6a93d386e0c92 388 PANTHER PTHR30386:SF7 34 382 2.1E-114 T 22-04-2016 NHAM_RS12360 80cb46e5063b3f54449433ffa5dba4e8 239 Gene3D G3DSA:1.10.287.110 180 235 7.8E-18 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS12360 80cb46e5063b3f54449433ffa5dba4e8 239 PANTHER PTHR12763 4 237 2.0E-118 T 22-04-2016 NHAM_RS12360 80cb46e5063b3f54449433ffa5dba4e8 239 SMART SM00271 184 238 5.7E-10 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS12360 80cb46e5063b3f54449433ffa5dba4e8 239 SUPERFAMILY SSF46565 179 235 5.5E-15 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS12360 80cb46e5063b3f54449433ffa5dba4e8 239 Pfam PF00226 DnaJ domain 186 217 1.8E-7 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS12360 80cb46e5063b3f54449433ffa5dba4e8 239 PANTHER PTHR12763:SF17 4 237 2.0E-118 T 22-04-2016 NHAM_RS14730 cd1ba9bdd0ff50b3c322574b88df3ca3 241 SUPERFAMILY SSF53335 4 147 8.2E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS14730 cd1ba9bdd0ff50b3c322574b88df3ca3 241 SUPERFAMILY SSF53335 192 212 8.2E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS14730 cd1ba9bdd0ff50b3c322574b88df3ca3 241 Pfam PF08241 Methyltransferase domain 44 139 1.7E-8 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NHAM_RS14730 cd1ba9bdd0ff50b3c322574b88df3ca3 241 Gene3D G3DSA:3.40.50.150 6 210 2.0E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS13030 afaa9e940097aabd103683aaea09ae5c 490 Pfam PF07690 Major Facilitator Superfamily 12 402 1.9E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS13030 afaa9e940097aabd103683aaea09ae5c 490 Gene3D G3DSA:1.20.1250.20 9 189 1.6E-27 T 22-04-2016 NHAM_RS13030 afaa9e940097aabd103683aaea09ae5c 490 Gene3D G3DSA:1.20.1250.20 258 455 3.5E-14 T 22-04-2016 NHAM_RS13030 afaa9e940097aabd103683aaea09ae5c 490 PANTHER PTHR23501:SF66 1 490 2.8E-212 T 22-04-2016 NHAM_RS13030 afaa9e940097aabd103683aaea09ae5c 490 PANTHER PTHR23501 1 490 2.8E-212 T 22-04-2016 NHAM_RS13030 afaa9e940097aabd103683aaea09ae5c 490 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 11 420 5.2E-71 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NHAM_RS13030 afaa9e940097aabd103683aaea09ae5c 490 SUPERFAMILY SSF103473 6 189 6.54E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS13030 afaa9e940097aabd103683aaea09ae5c 490 SUPERFAMILY SSF103473 241 449 6.54E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS15660 2401a615eb045029ec203d65a4b7fa3d 350 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 321 5.8E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15660 2401a615eb045029ec203d65a4b7fa3d 350 Gene3D G3DSA:3.40.50.720 1 190 1.2E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15660 2401a615eb045029ec203d65a4b7fa3d 350 PANTHER PTHR10366:SF41 2 348 7.0E-155 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NHAM_RS15660 2401a615eb045029ec203d65a4b7fa3d 350 Gene3D G3DSA:3.90.25.10 191 334 1.5E-53 T 22-04-2016 NHAM_RS15660 2401a615eb045029ec203d65a4b7fa3d 350 PANTHER PTHR10366 2 348 7.0E-155 T 22-04-2016 NHAM_RS15660 2401a615eb045029ec203d65a4b7fa3d 350 SUPERFAMILY SSF51735 1 336 2.12E-92 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15660 2401a615eb045029ec203d65a4b7fa3d 350 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 334 5.7E-140 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 Gene3D G3DSA:2.40.340.10 331 398 9.0E-11 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 Gene3D G3DSA:3.90.105.10 128 159 2.9E-11 T 22-04-2016 NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 174 306 6.4E-25 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 SUPERFAMILY SSF53218 174 321 1.19E-39 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 SUPERFAMILY SSF63867 325 401 4.19E-15 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 SMART SM00852 177 316 1.5E-40 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 PANTHER PTHR10192 1 382 3.7E-129 T 22-04-2016 NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 Gene3D G3DSA:3.40.980.10 160 330 1.4E-53 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 Gene3D G3DSA:2.170.190.11 46 127 3.2E-28 T 22-04-2016 NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 Pfam PF03454 MoeA C-terminal region (domain IV) 329 401 2.7E-14 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 Pfam PF03453 MoeA N-terminal region (domain I and II) 5 162 3.8E-29 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 Pfam PF00994 Probable molybdopterin binding domain 177 315 1.4E-23 T 22-04-2016 IPR001453 MoaB/Mog domain NHAM_RS08845 e3f0d88e1fea5882630ad26d5093e53b 404 SUPERFAMILY SSF63882 3 173 1.57E-46 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 NHAM_RS00475 8877e4656b27657ccb05dc5ffc0c9efe 213 PANTHER PTHR38589 24 213 2.9E-53 T 22-04-2016 NHAM_RS00475 8877e4656b27657ccb05dc5ffc0c9efe 213 Pfam PF03734 L,D-transpeptidase catalytic domain 65 212 8.2E-10 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NHAM_RS00475 8877e4656b27657ccb05dc5ffc0c9efe 213 PANTHER PTHR38589:SF1 24 213 2.9E-53 T 22-04-2016 NHAM_RS04870 ca446f321ba38792b5bb350e334c7362 259 Pfam PF01925 Sulfite exporter TauE/SafE 8 251 7.6E-49 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NHAM_RS04870 ca446f321ba38792b5bb350e334c7362 259 PANTHER PTHR30269 1 257 1.9E-43 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 NHAM_RS04870 ca446f321ba38792b5bb350e334c7362 259 PANTHER PTHR30269:SF9 1 257 1.9E-43 T 22-04-2016 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 PANTHER PTHR30075:SF2 560 763 1.9E-275 T 22-04-2016 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 PANTHER PTHR30075:SF2 1 523 1.9E-275 T 22-04-2016 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 413 432 4.9E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 4.9E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 4.9E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 4.9E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 328 344 4.9E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 529 9.0E-143 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 620 1.3E-197 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 SUPERFAMILY SSF109604 349 505 8.63E-12 T 22-04-2016 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 PANTHER PTHR30075 560 763 1.9E-275 T 22-04-2016 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 PANTHER PTHR30075 1 523 1.9E-275 T 22-04-2016 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 Pfam PF05746 DALR anticodon binding domain 654 751 4.8E-7 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 NHAM_RS16445 acf702070f442fbee529d95fbf986cc9 764 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 762 24.289 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NHAM_RS02490 1a43a9bd3a320765f6fbc6321c6896af 285 Gene3D G3DSA:3.40.50.150 86 254 2.2E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS02490 1a43a9bd3a320765f6fbc6321c6896af 285 SUPERFAMILY SSF53335 87 207 2.44E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS02490 1a43a9bd3a320765f6fbc6321c6896af 285 PANTHER PTHR13090:SF3 11 278 2.9E-96 T 22-04-2016 NHAM_RS02490 1a43a9bd3a320765f6fbc6321c6896af 285 Pfam PF08241 Methyltransferase domain 84 129 8.8E-7 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NHAM_RS02490 1a43a9bd3a320765f6fbc6321c6896af 285 PANTHER PTHR13090 11 278 2.9E-96 T 22-04-2016 NHAM_RS06310 f3389fae2a02cc74510ba3a3716c80a1 227 Gene3D G3DSA:3.30.70.270 73 226 4.5E-42 T 22-04-2016 NHAM_RS06310 f3389fae2a02cc74510ba3a3716c80a1 227 PANTHER PTHR10799:SF774 35 226 4.9E-21 T 22-04-2016 NHAM_RS06310 f3389fae2a02cc74510ba3a3716c80a1 227 Pfam PF00990 Diguanylate cyclase, GGDEF domain 71 225 8.9E-37 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS06310 f3389fae2a02cc74510ba3a3716c80a1 227 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 67 225 6.4E-35 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS06310 f3389fae2a02cc74510ba3a3716c80a1 227 SMART SM00267 60 224 4.4E-39 T 22-04-2016 IPR000160 GGDEF domain NHAM_RS06310 f3389fae2a02cc74510ba3a3716c80a1 227 PANTHER PTHR10799 35 226 4.9E-21 T 22-04-2016 NHAM_RS06310 f3389fae2a02cc74510ba3a3716c80a1 227 SUPERFAMILY SSF55073 78 226 5.49E-39 T 22-04-2016 IPR029787 Nucleotide cyclase NHAM_RS11665 89993fc182302f44b88216f836747640 496 Gene3D G3DSA:1.10.860.10 22 122 8.4E-25 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal NHAM_RS11665 89993fc182302f44b88216f836747640 496 SUPERFAMILY SSF52540 197 478 1.19E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11665 89993fc182302f44b88216f836747640 496 SUPERFAMILY SSF48024 19 130 1.44E-29 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 NHAM_RS11665 89993fc182302f44b88216f836747640 496 SMART SM00382 216 435 5.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS11665 89993fc182302f44b88216f836747640 496 Gene3D G3DSA:3.40.50.300 185 487 9.3E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11665 89993fc182302f44b88216f836747640 496 Pfam PF03796 DnaB-like helicase C terminal domain 199 485 1.9E-100 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 NHAM_RS11665 89993fc182302f44b88216f836747640 496 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 21 487 4.7E-150 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 NHAM_RS11665 89993fc182302f44b88216f836747640 496 Pfam PF00772 DnaB-like helicase N terminal domain 21 122 2.4E-24 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 NHAM_RS11665 89993fc182302f44b88216f836747640 496 PANTHER PTHR30153 447 495 9.4E-168 T 22-04-2016 NHAM_RS11665 89993fc182302f44b88216f836747640 496 PANTHER PTHR30153 5 430 9.4E-168 T 22-04-2016 NHAM_RS07865 81caa0c9b22814fb28c716072c2a2203 398 SUPERFAMILY SSF51905 259 363 3.56E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07865 81caa0c9b22814fb28c716072c2a2203 398 SUPERFAMILY SSF51905 4 159 3.56E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07865 81caa0c9b22814fb28c716072c2a2203 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 303 1.9E-10 T 22-04-2016 NHAM_RS07865 81caa0c9b22814fb28c716072c2a2203 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.9E-10 T 22-04-2016 NHAM_RS07865 81caa0c9b22814fb28c716072c2a2203 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 272 287 1.9E-10 T 22-04-2016 NHAM_RS07865 81caa0c9b22814fb28c716072c2a2203 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 138 153 1.9E-10 T 22-04-2016 NHAM_RS07865 81caa0c9b22814fb28c716072c2a2203 398 Gene3D G3DSA:3.50.50.60 270 305 4.5E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07865 81caa0c9b22814fb28c716072c2a2203 398 Gene3D G3DSA:3.50.50.60 2 162 4.5E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS07865 81caa0c9b22814fb28c716072c2a2203 398 Pfam PF01494 FAD binding domain 3 304 3.3E-13 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 NHAM_RS08995 e9205dc82ab4c6fe924dc7d07834838d 341 Gene3D G3DSA:3.20.20.300 6 313 6.2E-71 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NHAM_RS08995 e9205dc82ab4c6fe924dc7d07834838d 341 PANTHER PTHR30480 6 332 9.6E-103 T 22-04-2016 NHAM_RS08995 e9205dc82ab4c6fe924dc7d07834838d 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 17 294 1.5E-50 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NHAM_RS08995 e9205dc82ab4c6fe924dc7d07834838d 341 PANTHER PTHR30480:SF7 6 332 9.6E-103 T 22-04-2016 NHAM_RS08995 e9205dc82ab4c6fe924dc7d07834838d 341 SUPERFAMILY SSF51445 5 291 1.79E-69 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS09095 5510884597ada241348958755d5358e5 889 SUPERFAMILY SSF53448 412 663 2.25E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS09095 5510884597ada241348958755d5358e5 889 PANTHER PTHR10587:SF64 629 887 7.1E-78 T 22-04-2016 NHAM_RS09095 5510884597ada241348958755d5358e5 889 PANTHER PTHR10587:SF64 323 590 7.1E-78 T 22-04-2016 NHAM_RS09095 5510884597ada241348958755d5358e5 889 SUPERFAMILY SSF51445 28 296 3.25E-52 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS09095 5510884597ada241348958755d5358e5 889 Gene3D G3DSA:3.90.550.10 420 664 2.2E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS09095 5510884597ada241348958755d5358e5 889 Pfam PF13641 Glycosyltransferase like family 2 420 649 3.3E-34 T 22-04-2016 NHAM_RS09095 5510884597ada241348958755d5358e5 889 Gene3D G3DSA:3.20.20.80 51 295 1.5E-30 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS09095 5510884597ada241348958755d5358e5 889 PANTHER PTHR10587 629 887 7.1E-78 T 22-04-2016 NHAM_RS09095 5510884597ada241348958755d5358e5 889 PANTHER PTHR10587 323 590 7.1E-78 T 22-04-2016 NHAM_RS18975 ee6b60b929ed4f9bde82fa3066868d99 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 60 195 2.4E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NHAM_RS18975 ee6b60b929ed4f9bde82fa3066868d99 237 PANTHER PTHR12725:SF79 1 195 3.2E-33 T 22-04-2016 NHAM_RS18975 ee6b60b929ed4f9bde82fa3066868d99 237 PANTHER PTHR12725 1 195 3.2E-33 T 22-04-2016 NHAM_RS18975 ee6b60b929ed4f9bde82fa3066868d99 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 19 195 3.7E-11 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS18975 ee6b60b929ed4f9bde82fa3066868d99 237 Gene3D G3DSA:3.40.50.1000 15 206 3.7E-27 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS18975 ee6b60b929ed4f9bde82fa3066868d99 237 SUPERFAMILY SSF56784 12 233 1.13E-33 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS18975 ee6b60b929ed4f9bde82fa3066868d99 237 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 195 2.5E-65 T 22-04-2016 IPR010237 Pyrimidine 5-nucleotidase NHAM_RS00520 52dcadcf8179787840ea9a3632cf687d 232 PANTHER PTHR31760 13 196 6.4E-43 T 22-04-2016 NHAM_RS00520 52dcadcf8179787840ea9a3632cf687d 232 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 34 193 9.5E-32 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 NHAM_RS00520 52dcadcf8179787840ea9a3632cf687d 232 Pfam PF02527 rRNA small subunit methyltransferase G 31 197 3.0E-36 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 NHAM_RS00520 52dcadcf8179787840ea9a3632cf687d 232 SUPERFAMILY SSF53335 19 199 1.2E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS00520 52dcadcf8179787840ea9a3632cf687d 232 PANTHER PTHR31760:SF0 13 196 6.4E-43 T 22-04-2016 NHAM_RS00520 52dcadcf8179787840ea9a3632cf687d 232 Gene3D G3DSA:3.40.50.150 16 219 7.5E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS00520 52dcadcf8179787840ea9a3632cf687d 232 PIRSF PIRSF003078 4 219 2.5E-49 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 NHAM_RS00520 52dcadcf8179787840ea9a3632cf687d 232 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 22 208 23.615 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 NHAM_RS09620 53896719d975f468c1c269f8a09e0772 90 Pfam PF13670 Peptidase propeptide and YPEB domain 6 88 8.1E-26 T 22-04-2016 IPR025711 PepSY domain NHAM_RS09620 53896719d975f468c1c269f8a09e0772 90 Gene3D G3DSA:3.10.180.10 28 78 3.2E-5 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 Gene3D G3DSA:3.40.50.150 69 264 3.3E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 SMART SM00138 3 266 1.7E-90 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 Pfam PF03705 CheR methyltransferase, all-alpha domain 5 54 8.7E-12 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 SUPERFAMILY SSF53335 70 265 1.4E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 PRINTS PR00996 Glutamate methyltransferase family signature 225 248 1.2E-38 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 PRINTS PR00996 Glutamate methyltransferase family signature 25 38 1.2E-38 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 PRINTS PR00996 Glutamate methyltransferase family signature 138 154 1.2E-38 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 1.2E-38 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 PRINTS PR00996 Glutamate methyltransferase family signature 206 220 1.2E-38 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 PRINTS PR00996 Glutamate methyltransferase family signature 63 75 1.2E-38 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 PANTHER PTHR24422 1 268 1.1E-116 T 22-04-2016 NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 Gene3D G3DSA:1.10.155.10 4 67 2.2E-9 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 PANTHER PTHR24422:SF9 1 268 1.1E-116 T 22-04-2016 NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 Pfam PF01739 CheR methyltransferase, SAM binding domain 70 257 9.1E-59 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal NHAM_RS17310 e36b1e62bd5e90bf5e05b295186f5d16 288 SUPERFAMILY SSF47757 2 69 7.59E-13 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NHAM_RS16345 8360ba0866c0cc4b30bffa4171289435 325 PANTHER PTHR21403 5 311 2.2E-89 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 NHAM_RS16345 8360ba0866c0cc4b30bffa4171289435 325 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 4 310 26.088 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 NHAM_RS16345 8360ba0866c0cc4b30bffa4171289435 325 Gene3D G3DSA:3.40.190.10 5 136 1.6E-26 T 22-04-2016 NHAM_RS16345 8360ba0866c0cc4b30bffa4171289435 325 SUPERFAMILY SSF53850 5 229 1.35E-49 T 22-04-2016 NHAM_RS16345 8360ba0866c0cc4b30bffa4171289435 325 Gene3D G3DSA:3.40.190.10 137 197 1.0E-23 T 22-04-2016 NHAM_RS16345 8360ba0866c0cc4b30bffa4171289435 325 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 209 3.1E-53 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 NHAM_RS16345 8360ba0866c0cc4b30bffa4171289435 325 Pfam PF01634 ATP phosphoribosyltransferase 56 224 1.2E-37 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 NHAM_RS16345 8360ba0866c0cc4b30bffa4171289435 325 PANTHER PTHR21403:SF0 5 311 2.2E-89 T 22-04-2016 NHAM_RS16345 8360ba0866c0cc4b30bffa4171289435 325 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 166 187 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 NHAM_RS04520 1a5549c60748627466d7a54d5fac0c49 225 Pfam PF06912 Protein of unknown function (DUF1275) 21 213 1.5E-34 T 22-04-2016 IPR010699 Protein of unknown function DUF1275 NHAM_RS04520 1a5549c60748627466d7a54d5fac0c49 225 PANTHER PTHR37314 1 219 5.3E-76 T 22-04-2016 NHAM_RS04520 1a5549c60748627466d7a54d5fac0c49 225 PANTHER PTHR37314:SF2 1 219 5.3E-76 T 22-04-2016 NHAM_RS10140 ad74cad9f51a4ebdbd1610ee67e2bbb4 140 PANTHER PTHR41377 1 138 1.4E-63 T 22-04-2016 NHAM_RS10140 ad74cad9f51a4ebdbd1610ee67e2bbb4 140 Pfam PF08837 Protein of unknown function (DUF1810) 5 138 2.9E-56 T 22-04-2016 IPR014937 Protein of unknown function DUF1810 NHAM_RS10140 ad74cad9f51a4ebdbd1610ee67e2bbb4 140 PANTHER PTHR41377:SF1 1 138 1.4E-63 T 22-04-2016 NHAM_RS10140 ad74cad9f51a4ebdbd1610ee67e2bbb4 140 SUPERFAMILY SSF140736 4 139 1.09E-57 T 22-04-2016 NHAM_RS10140 ad74cad9f51a4ebdbd1610ee67e2bbb4 140 PIRSF PIRSF008546 1 140 1.7E-63 T 22-04-2016 IPR014937 Protein of unknown function DUF1810 NHAM_RS11870 bfcded5948bdbb7d479c573cb8dedfe8 215 PANTHER PTHR12277 27 210 2.5E-48 T 22-04-2016 NHAM_RS11870 bfcded5948bdbb7d479c573cb8dedfe8 215 Gene3D G3DSA:3.40.50.1820 3 211 2.0E-63 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS11870 bfcded5948bdbb7d479c573cb8dedfe8 215 PANTHER PTHR12277:SF79 27 210 2.5E-48 T 22-04-2016 NHAM_RS11870 bfcded5948bdbb7d479c573cb8dedfe8 215 SUPERFAMILY SSF53474 4 209 2.01E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS11870 bfcded5948bdbb7d479c573cb8dedfe8 215 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 17 138 7.0E-10 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 NHAM_RS11260 c8d100c16825565ccb3f13021cf1a2dc 356 PANTHER PTHR11432 10 356 5.1E-164 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 NHAM_RS11260 c8d100c16825565ccb3f13021cf1a2dc 356 PANTHER PTHR11432:SF3 10 356 5.1E-164 T 22-04-2016 NHAM_RS11260 c8d100c16825565ccb3f13021cf1a2dc 356 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 16 351 23.723 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 NHAM_RS11260 c8d100c16825565ccb3f13021cf1a2dc 356 Pfam PF00146 NADH dehydrogenase 24 344 4.7E-117 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 NHAM_RS11260 c8d100c16825565ccb3f13021cf1a2dc 356 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 232 245 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 NHAM_RS23905 6b2ed4482b818e0ce96e4f0e951d5d7a 314 Pfam PF07813 LTXXQ motif family protein 209 300 1.1E-21 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 NHAM_RS23905 6b2ed4482b818e0ce96e4f0e951d5d7a 314 Pfam PF07813 LTXXQ motif family protein 92 178 1.2E-20 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 NHAM_RS22735 54e30bece325e76e1e755f0f8b49a401 162 Gene3D G3DSA:3.50.50.60 51 139 3.6E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS22735 54e30bece325e76e1e755f0f8b49a401 162 PANTHER PTHR13789 2 162 1.4E-59 T 22-04-2016 NHAM_RS22735 54e30bece325e76e1e755f0f8b49a401 162 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 77 90 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 NHAM_RS22735 54e30bece325e76e1e755f0f8b49a401 162 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 63 78 3.0E-6 T 22-04-2016 NHAM_RS22735 54e30bece325e76e1e755f0f8b49a401 162 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 78 94 3.0E-6 T 22-04-2016 NHAM_RS22735 54e30bece325e76e1e755f0f8b49a401 162 PANTHER PTHR13789:SF5 2 162 1.4E-59 T 22-04-2016 NHAM_RS22735 54e30bece325e76e1e755f0f8b49a401 162 SUPERFAMILY SSF51905 50 161 1.69E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS22735 54e30bece325e76e1e755f0f8b49a401 162 Pfam PF01494 FAD binding domain 13 119 1.4E-13 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 NHAM_RS09225 af07d13b721357bad69fe60e6422d9a4 477 SUPERFAMILY SSF51905 11 380 2.59E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS09225 af07d13b721357bad69fe60e6422d9a4 477 Gene3D G3DSA:3.40.50.720 28 70 3.6E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS09225 af07d13b721357bad69fe60e6422d9a4 477 PANTHER PTHR11806 1 429 6.6E-208 T 22-04-2016 NHAM_RS09225 af07d13b721357bad69fe60e6422d9a4 477 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 10 467 1.7E-162 T 22-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 NHAM_RS09225 af07d13b721357bad69fe60e6422d9a4 477 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 353 376 - T 22-04-2016 IPR020595 MnmG-related, conserved site NHAM_RS09225 af07d13b721357bad69fe60e6422d9a4 477 PANTHER PTHR11806:SF2 1 429 6.6E-208 T 22-04-2016 NHAM_RS09225 af07d13b721357bad69fe60e6422d9a4 477 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 11 469 34.682 T 22-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 NHAM_RS09225 af07d13b721357bad69fe60e6422d9a4 477 Gene3D G3DSA:3.50.50.60 11 27 1.5E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS09225 af07d13b721357bad69fe60e6422d9a4 477 Gene3D G3DSA:3.50.50.60 81 154 1.5E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS09225 af07d13b721357bad69fe60e6422d9a4 477 Pfam PF01134 Glucose inhibited division protein A 11 382 3.8E-106 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 NHAM_RS10180 c63b817f346e61245f0801dce41b76ce 334 PANTHER PTHR33055:SF2 1 325 1.5E-108 T 22-04-2016 NHAM_RS10180 c63b817f346e61245f0801dce41b76ce 334 PANTHER PTHR33055 1 325 1.5E-108 T 22-04-2016 NHAM_RS10180 c63b817f346e61245f0801dce41b76ce 334 Pfam PF01548 Transposase 2 134 2.6E-9 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS10180 c63b817f346e61245f0801dce41b76ce 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 203 280 1.3E-20 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS19330 c63b817f346e61245f0801dce41b76ce 334 PANTHER PTHR33055:SF2 1 325 1.5E-108 T 22-04-2016 NHAM_RS19330 c63b817f346e61245f0801dce41b76ce 334 PANTHER PTHR33055 1 325 1.5E-108 T 22-04-2016 NHAM_RS19330 c63b817f346e61245f0801dce41b76ce 334 Pfam PF01548 Transposase 2 134 2.6E-9 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS19330 c63b817f346e61245f0801dce41b76ce 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 203 280 1.3E-20 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS01330 15fafdad1c82ddabc5f7c63646c35b45 194 SUPERFAMILY SSF55729 14 188 1.64E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS01330 15fafdad1c82ddabc5f7c63646c35b45 194 PANTHER PTHR13256 4 192 8.0E-70 T 22-04-2016 NHAM_RS01330 15fafdad1c82ddabc5f7c63646c35b45 194 Pfam PF13302 Acetyltransferase (GNAT) domain 20 164 4.8E-23 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS01330 15fafdad1c82ddabc5f7c63646c35b45 194 PANTHER PTHR13256:SF24 4 192 8.0E-70 T 22-04-2016 NHAM_RS01330 15fafdad1c82ddabc5f7c63646c35b45 194 Gene3D G3DSA:3.40.630.30 12 188 3.1E-50 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS00390 848c20ff684b5c498f57639e5a9ae076 746 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 3 287 1.1E-62 T 22-04-2016 IPR018712 Domain of unknown function DUF2235 NHAM_RS00390 848c20ff684b5c498f57639e5a9ae076 746 PANTHER PTHR33840 1 299 9.1E-78 T 22-04-2016 NHAM_RS00390 848c20ff684b5c498f57639e5a9ae076 746 PANTHER PTHR33840:SF4 1 299 9.1E-78 T 22-04-2016 NHAM_RS11290 21bb893f4b7bcddfefab60444185ff03 206 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 13 161 30.745 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 NHAM_RS11290 21bb893f4b7bcddfefab60444185ff03 206 SUPERFAMILY SSF143243 10 186 6.02E-58 T 22-04-2016 NHAM_RS11290 21bb893f4b7bcddfefab60444185ff03 206 PANTHER PTHR10884 3 204 5.1E-104 T 22-04-2016 NHAM_RS11290 21bb893f4b7bcddfefab60444185ff03 206 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 34 153 1.2E-42 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 NHAM_RS11290 21bb893f4b7bcddfefab60444185ff03 206 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 114 135 - T 22-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 NHAM_RS11290 21bb893f4b7bcddfefab60444185ff03 206 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 85 140 7.0E-27 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 NHAM_RS11290 21bb893f4b7bcddfefab60444185ff03 206 PANTHER PTHR10884:SF6 3 204 5.1E-104 T 22-04-2016 NHAM_RS11290 21bb893f4b7bcddfefab60444185ff03 206 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 33 153 3.4E-43 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 PANTHER PTHR10992 39 310 5.3E-41 T 22-04-2016 NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 PRINTS PR00111 Alpha/beta hydrolase fold signature 140 153 4.4E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 PRINTS PR00111 Alpha/beta hydrolase fold signature 81 96 4.4E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 PRINTS PR00111 Alpha/beta hydrolase fold signature 126 139 4.4E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 PRINTS PR00111 Alpha/beta hydrolase fold signature 253 267 4.4E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 PRINTS PR00412 Epoxide hydrolase signature 81 96 1.2E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 PRINTS PR00412 Epoxide hydrolase signature 140 153 1.2E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 PRINTS PR00412 Epoxide hydrolase signature 126 139 1.2E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 PRINTS PR00412 Epoxide hydrolase signature 285 307 1.2E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 PRINTS PR00412 Epoxide hydrolase signature 251 267 1.2E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 Pfam PF12697 Alpha/beta hydrolase family 57 301 9.9E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 SUPERFAMILY SSF53474 31 306 1.05E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS06220 ab6765d2da1e0f0ffa658dddf0704824 332 Gene3D G3DSA:3.40.50.1820 32 306 4.4E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS06415 0a21242c03497766f2c539b64e211200 356 Pfam PF01522 Polysaccharide deacetylase 135 249 1.0E-24 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS06415 0a21242c03497766f2c539b64e211200 356 PANTHER PTHR10587:SF70 99 330 2.3E-74 T 22-04-2016 NHAM_RS06415 0a21242c03497766f2c539b64e211200 356 SUPERFAMILY SSF88713 132 318 7.17E-50 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NHAM_RS06415 0a21242c03497766f2c539b64e211200 356 PANTHER PTHR10587 99 330 2.3E-74 T 22-04-2016 NHAM_RS06415 0a21242c03497766f2c539b64e211200 356 Gene3D G3DSA:3.20.20.370 132 318 8.1E-52 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS12555 ccf457a5d42e03ff04da90e36e27f0b4 360 PANTHER PTHR23289:SF1 13 343 9.7E-188 T 22-04-2016 NHAM_RS12555 ccf457a5d42e03ff04da90e36e27f0b4 360 PANTHER PTHR23289 13 343 9.7E-188 T 22-04-2016 NHAM_RS12555 ccf457a5d42e03ff04da90e36e27f0b4 360 Pfam PF02628 Cytochrome oxidase assembly protein 16 337 6.0E-111 T 22-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 NHAM_RS12555 ccf457a5d42e03ff04da90e36e27f0b4 360 Hamap MF_01665 Heme A synthase [ctaA]. 12 346 26.22 T 22-04-2016 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 UniPathway: UPA00269 NHAM_RS07910 c8bdcdfc0117f5994bb5a3f651a176d5 241 PANTHER PTHR11229 1 237 5.9E-111 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07910 c8bdcdfc0117f5994bb5a3f651a176d5 241 SUPERFAMILY SSF50447 1 219 1.32E-77 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain NHAM_RS07910 c8bdcdfc0117f5994bb5a3f651a176d5 241 Gene3D G3DSA:2.40.30.10 4 33 5.0E-9 T 22-04-2016 NHAM_RS07910 c8bdcdfc0117f5994bb5a3f651a176d5 241 Gene3D G3DSA:2.40.30.10 159 211 5.0E-9 T 22-04-2016 NHAM_RS07910 c8bdcdfc0117f5994bb5a3f651a176d5 241 Gene3D G3DSA:4.10.960.10 77 158 2.8E-28 T 22-04-2016 NHAM_RS07910 c8bdcdfc0117f5994bb5a3f651a176d5 241 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 34.45 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07910 c8bdcdfc0117f5994bb5a3f651a176d5 241 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site NHAM_RS07910 c8bdcdfc0117f5994bb5a3f651a176d5 241 Pfam PF00297 Ribosomal protein L3 97 180 1.1E-12 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07910 c8bdcdfc0117f5994bb5a3f651a176d5 241 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 8.7E-79 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 Gene3D G3DSA:3.30.365.10 369 460 1.5E-64 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 Gene3D G3DSA:3.30.365.10 611 762 1.5E-64 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 SUPERFAMILY SSF54665 5 158 8.5E-43 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 155 693 1.4E-159 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 SUPERFAMILY SSF56003 128 762 1.83E-182 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 PANTHER PTHR11908:SF76 3 765 0.0 T 22-04-2016 NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 Gene3D G3DSA:3.30.365.10 291 366 8.1E-41 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 Gene3D G3DSA:3.30.365.10 125 183 8.1E-41 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 PANTHER PTHR11908 3 765 0.0 T 22-04-2016 NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 Gene3D G3DSA:3.90.1170.50 8 124 2.5E-34 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 Gene3D G3DSA:3.30.365.10 461 610 1.6E-44 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 SMART SM01008 22 136 3.1E-42 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 Gene3D G3DSA:3.30.365.10 184 289 1.2E-29 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NHAM_RS06670 380b4ae58d08bd671f572104f040eba6 767 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 23 135 1.9E-20 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NHAM_RS00610 c6052d35d6dd375820fc991be1bc0ddd 197 SUPERFAMILY SSF54211 88 178 1.14E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS00610 c6052d35d6dd375820fc991be1bc0ddd 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 7.6E-65 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 NHAM_RS00610 c6052d35d6dd375820fc991be1bc0ddd 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 NHAM_RS00610 c6052d35d6dd375820fc991be1bc0ddd 197 PANTHER PTHR23133:SF2 1 195 8.4E-106 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 NHAM_RS00610 c6052d35d6dd375820fc991be1bc0ddd 197 PANTHER PTHR23133 1 195 8.4E-106 T 22-04-2016 NHAM_RS00610 c6052d35d6dd375820fc991be1bc0ddd 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 NHAM_RS00610 c6052d35d6dd375820fc991be1bc0ddd 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.755 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 NHAM_RS00610 c6052d35d6dd375820fc991be1bc0ddd 197 Gene3D G3DSA:3.30.230.40 1 88 1.5E-37 T 22-04-2016 NHAM_RS00610 c6052d35d6dd375820fc991be1bc0ddd 197 SUPERFAMILY SSF54211 1 83 3.54E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS00610 c6052d35d6dd375820fc991be1bc0ddd 197 Gene3D G3DSA:3.30.230.40 90 195 2.1E-33 T 22-04-2016 NHAM_RS12150 5b62b1177a0ba12f4f55f66969262687 220 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 18 131 5.3E-31 T 22-04-2016 IPR006521 Tail protein I NHAM_RS12150 5b62b1177a0ba12f4f55f66969262687 220 Pfam PF09684 Phage tail protein (Tail_P2_I) 18 156 3.1E-38 T 22-04-2016 IPR006521 Tail protein I NHAM_RS08100 1047934293aede51d98dfbf0f8aa016c 179 PIRSF PIRSF032079 3 177 5.7E-63 T 22-04-2016 IPR014569 Ubiquinol-cytochrome c chaperone, CBP3-related NHAM_RS08100 1047934293aede51d98dfbf0f8aa016c 179 PANTHER PTHR12184 1 166 3.4E-70 T 22-04-2016 IPR007129 Ubiquinol-cytochrome c chaperone, CBP3 NHAM_RS08100 1047934293aede51d98dfbf0f8aa016c 179 PANTHER PTHR12184:SF2 1 166 3.4E-70 T 22-04-2016 NHAM_RS08100 1047934293aede51d98dfbf0f8aa016c 179 Pfam PF03981 Ubiquinol-cytochrome C chaperone 39 169 2.2E-44 T 22-04-2016 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 NHAM_RS05825 dfe9b130a8fff3cf3c4d3346956cba0a 260 PANTHER PTHR20854 1 260 1.7E-96 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS05825 dfe9b130a8fff3cf3c4d3346956cba0a 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 1.6E-22 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS05825 dfe9b130a8fff3cf3c4d3346956cba0a 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 1.6E-22 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS05825 dfe9b130a8fff3cf3c4d3346956cba0a 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 1.6E-22 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS05825 dfe9b130a8fff3cf3c4d3346956cba0a 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 1.6E-22 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS05825 dfe9b130a8fff3cf3c4d3346956cba0a 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 1.6E-22 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS05825 dfe9b130a8fff3cf3c4d3346956cba0a 260 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 7 259 1.1E-101 T 22-04-2016 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 NHAM_RS05825 dfe9b130a8fff3cf3c4d3346956cba0a 260 Gene3D G3DSA:3.40.190.80 155 259 3.0E-23 T 22-04-2016 NHAM_RS05825 dfe9b130a8fff3cf3c4d3346956cba0a 260 Pfam PF00459 Inositol monophosphatase family 9 257 5.4E-51 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS05825 dfe9b130a8fff3cf3c4d3346956cba0a 260 PANTHER PTHR20854:SF38 1 260 1.7E-96 T 22-04-2016 NHAM_RS05825 dfe9b130a8fff3cf3c4d3346956cba0a 260 Gene3D G3DSA:3.30.540.10 6 154 9.7E-41 T 22-04-2016 NHAM_RS05825 dfe9b130a8fff3cf3c4d3346956cba0a 260 SUPERFAMILY SSF56655 6 259 2.49E-73 T 22-04-2016 NHAM_RS05175 d94f875ca603ce08440573dd428c2901 176 PANTHER PTHR34720 1 176 1.6E-50 T 22-04-2016 NHAM_RS05175 d94f875ca603ce08440573dd428c2901 176 Pfam PF07484 Phage Tail Collar Domain 7 63 8.1E-24 T 22-04-2016 IPR011083 Phage tail collar domain NHAM_RS05175 d94f875ca603ce08440573dd428c2901 176 Gene3D G3DSA:3.90.1340.10 1 67 1.5E-27 T 22-04-2016 IPR011083 Phage tail collar domain NHAM_RS05175 d94f875ca603ce08440573dd428c2901 176 SUPERFAMILY SSF88874 1 170 2.7E-44 T 22-04-2016 NHAM_RS08380 da1adff7f1d09093979cc6646a234c01 418 PANTHER PTHR23150:SF24 1 414 2.2E-109 T 22-04-2016 NHAM_RS08380 da1adff7f1d09093979cc6646a234c01 418 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 30 414 1.4E-152 T 22-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 NHAM_RS08380 da1adff7f1d09093979cc6646a234c01 418 PANTHER PTHR23150 1 414 2.2E-109 T 22-04-2016 NHAM_RS08380 da1adff7f1d09093979cc6646a234c01 418 SUPERFAMILY SSF56436 200 414 2.45E-60 T 22-04-2016 IPR016187 C-type lectin fold NHAM_RS08380 da1adff7f1d09093979cc6646a234c01 418 Pfam PF12867 DinB superfamily 33 168 4.7E-8 T 22-04-2016 IPR024775 DinB-like domain NHAM_RS08380 da1adff7f1d09093979cc6646a234c01 418 Pfam PF03781 Sulfatase-modifying factor enzyme 1 200 340 5.8E-23 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme NHAM_RS08380 da1adff7f1d09093979cc6646a234c01 418 Gene3D G3DSA:3.90.1580.10 339 414 1.0E-14 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme NHAM_RS08380 da1adff7f1d09093979cc6646a234c01 418 Gene3D G3DSA:3.90.1580.10 199 338 7.5E-36 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme NHAM_RS05250 1460572ce8fdf39b88980aa91077bacd 81 SUPERFAMILY SSF110849 32 70 8.89E-5 T 22-04-2016 IPR003115 ParB/Sulfiredoxin NHAM_RS05250 1460572ce8fdf39b88980aa91077bacd 81 Gene3D G3DSA:3.90.1530.10 35 69 3.5E-5 T 22-04-2016 NHAM_RS23785 c9fc47aaf3ecc11df129cc5daebc0e0e 86 Pfam PF13932 GidA associated domain 15 84 8.6E-33 T 22-04-2016 IPR026904 GidA associated domain 3 NHAM_RS23785 c9fc47aaf3ecc11df129cc5daebc0e0e 86 PANTHER PTHR11806 1 86 1.8E-41 T 22-04-2016 NHAM_RS23785 c9fc47aaf3ecc11df129cc5daebc0e0e 86 PANTHER PTHR11806:SF0 1 86 1.8E-41 T 22-04-2016 NHAM_RS14355 55ab90add0a2510a86a8562919ed86f2 333 PANTHER PTHR22926:SF3 1 333 3.2E-51 T 22-04-2016 NHAM_RS14355 55ab90add0a2510a86a8562919ed86f2 333 Pfam PF00953 Glycosyl transferase family 4 79 227 1.8E-29 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS14355 55ab90add0a2510a86a8562919ed86f2 333 PANTHER PTHR22926 1 333 3.2E-51 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 SUPERFAMILY SSF48592 406 522 3.33E-76 T 22-04-2016 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 SUPERFAMILY SSF48592 7 134 3.33E-76 T 22-04-2016 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.5E-98 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 PANTHER PTHR11353 3 545 3.9E-258 T 22-04-2016 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.999 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 SUPERFAMILY SSF54849 138 196 4.27E-20 T 22-04-2016 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 Gene3D G3DSA:3.50.7.10 189 366 3.8E-102 T 22-04-2016 IPR027409 GroEL-like apical domain NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 Gene3D G3DSA:1.10.560.10 3 188 8.3E-45 T 22-04-2016 IPR027413 GroEL-like equatorial domain NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 SUPERFAMILY SSF52029 184 376 8.63E-86 T 22-04-2016 IPR027409 GroEL-like apical domain NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 4.9E-259 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 NHAM_RS06000 de0d4f85ea554272649097545b53f5db 545 Gene3D G3DSA:1.10.560.10 367 519 4.0E-45 T 22-04-2016 IPR027413 GroEL-like equatorial domain NHAM_RS03295 0f0de3743a685f034300289c3c3ff7a2 341 PIRSF PIRSF002756 2 340 1.4E-104 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 NHAM_RS03295 0f0de3743a685f034300289c3c3ff7a2 341 PANTHER PTHR30570:SF0 7 335 6.8E-136 T 22-04-2016 NHAM_RS03295 0f0de3743a685f034300289c3c3ff7a2 341 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 337 1.7E-121 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 NHAM_RS03295 0f0de3743a685f034300289c3c3ff7a2 341 Gene3D G3DSA:3.40.190.10 181 339 2.8E-30 T 22-04-2016 NHAM_RS03295 0f0de3743a685f034300289c3c3ff7a2 341 Gene3D G3DSA:3.40.190.10 27 177 7.1E-56 T 22-04-2016 NHAM_RS03295 0f0de3743a685f034300289c3c3ff7a2 341 Pfam PF12849 PBP superfamily domain 24 308 5.6E-62 T 22-04-2016 IPR024370 PBP domain NHAM_RS03295 0f0de3743a685f034300289c3c3ff7a2 341 PANTHER PTHR30570 7 335 6.8E-136 T 22-04-2016 NHAM_RS03295 0f0de3743a685f034300289c3c3ff7a2 341 SUPERFAMILY SSF53850 29 336 2.84E-97 T 22-04-2016 NHAM_RS02010 14e531c94e8d1c76bca52e1365df2b2a 269 PANTHER PTHR23083 56 230 1.4E-24 T 22-04-2016 NHAM_RS02010 14e531c94e8d1c76bca52e1365df2b2a 269 Gene3D G3DSA:1.25.40.10 57 244 6.5E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS02010 14e531c94e8d1c76bca52e1365df2b2a 269 PIRSF PIRSF035836 1 261 3.5E-105 T 22-04-2016 IPR014596 Uncharacterised conserved protein UCP035836 NHAM_RS02010 14e531c94e8d1c76bca52e1365df2b2a 269 Pfam PF13424 Tetratricopeptide repeat 143 202 2.9E-7 T 22-04-2016 NHAM_RS02010 14e531c94e8d1c76bca52e1365df2b2a 269 SMART SM00028 69 102 67.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS02010 14e531c94e8d1c76bca52e1365df2b2a 269 SMART SM00028 171 204 11.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS02010 14e531c94e8d1c76bca52e1365df2b2a 269 SMART SM00028 205 238 410.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS02010 14e531c94e8d1c76bca52e1365df2b2a 269 SMART SM00028 137 170 0.047 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS02010 14e531c94e8d1c76bca52e1365df2b2a 269 SUPERFAMILY SSF48452 53 236 1.83E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS00840 12442cf200eaf868d51c7c1f55d46047 143 Pfam PF00011 Hsp20/alpha crystallin family 49 139 3.7E-14 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain NHAM_RS00840 12442cf200eaf868d51c7c1f55d46047 143 PANTHER PTHR11527:SF122 30 143 3.9E-21 T 22-04-2016 NHAM_RS00840 12442cf200eaf868d51c7c1f55d46047 143 PANTHER PTHR11527 30 143 3.9E-21 T 22-04-2016 IPR031107 Small heat shock protein HSP20 NHAM_RS00840 12442cf200eaf868d51c7c1f55d46047 143 SUPERFAMILY SSF49764 48 139 1.85E-15 T 22-04-2016 IPR008978 HSP20-like chaperone NHAM_RS00840 12442cf200eaf868d51c7c1f55d46047 143 Gene3D G3DSA:2.60.40.790 49 140 1.4E-12 T 22-04-2016 IPR008978 HSP20-like chaperone NHAM_RS16885 2ddd80c9e16eac5f08d96af470e8715d 224 SMART SM00862 145 220 8.7E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS16885 2ddd80c9e16eac5f08d96af470e8715d 224 SUPERFAMILY SSF52172 1 172 1.85E-36 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS16885 2ddd80c9e16eac5f08d96af470e8715d 224 PANTHER PTHR26402 1 223 1.1E-76 T 22-04-2016 NHAM_RS16885 2ddd80c9e16eac5f08d96af470e8715d 224 Gene3D G3DSA:1.10.10.10 126 221 4.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS16885 2ddd80c9e16eac5f08d96af470e8715d 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 1.2E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS16885 2ddd80c9e16eac5f08d96af470e8715d 224 Pfam PF00072 Response regulator receiver domain 3 112 7.4E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS16885 2ddd80c9e16eac5f08d96af470e8715d 224 Gene3D G3DSA:3.40.50.2300 1 119 7.3E-36 T 22-04-2016 NHAM_RS16885 2ddd80c9e16eac5f08d96af470e8715d 224 PANTHER PTHR26402:SF399 1 223 1.1E-76 T 22-04-2016 NHAM_RS16885 2ddd80c9e16eac5f08d96af470e8715d 224 SMART SM00448 1 112 1.5E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS09150 09e0ca49c91f9a34dd4e2885b6721760 178 PANTHER PTHR33162 1 102 9.3E-41 T 22-04-2016 NHAM_RS09150 09e0ca49c91f9a34dd4e2885b6721760 178 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 73 1.5E-23 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 NHAM_RS09150 09e0ca49c91f9a34dd4e2885b6721760 178 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 140 16.087 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 NHAM_RS09150 09e0ca49c91f9a34dd4e2885b6721760 178 PANTHER PTHR33162:SF1 1 102 9.3E-41 T 22-04-2016 NHAM_RS09150 09e0ca49c91f9a34dd4e2885b6721760 178 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.4E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 NHAM_RS09150 09e0ca49c91f9a34dd4e2885b6721760 178 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.4E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 NHAM_RS09150 09e0ca49c91f9a34dd4e2885b6721760 178 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.4E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 NHAM_RS09150 09e0ca49c91f9a34dd4e2885b6721760 178 Pfam PF02416 mttA/Hcf106 family 4 36 9.7E-5 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 NHAM_RS08920 e3c779803a95705f9d8b55f322730ef6 416 SUPERFAMILY SSF53474 199 267 4.21E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS08920 e3c779803a95705f9d8b55f322730ef6 416 Gene3D G3DSA:3.40.50.1820 197 328 1.6E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS09035 4e924782e9b9cbdca33ece4eeeeac9f3 142 SUPERFAMILY SSF74653 30 121 1.69E-7 T 22-04-2016 NHAM_RS09035 4e924782e9b9cbdca33ece4eeeeac9f3 142 Gene3D G3DSA:3.30.1150.10 29 124 3.2E-6 T 22-04-2016 NHAM_RS00340 4d8052d1dd33ec582bc658752ea81608 164 SUPERFAMILY SSF52833 5 157 2.25E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00340 4d8052d1dd33ec582bc658752ea81608 164 Pfam PF00578 AhpC/TSA family 7 135 7.5E-9 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 NHAM_RS00340 4d8052d1dd33ec582bc658752ea81608 164 Gene3D G3DSA:3.40.30.10 6 155 6.4E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS19725 9fd6edcc0af75f44bd07d4aded797cd1 74 SUPERFAMILY SSF142921 4 74 1.96E-16 T 22-04-2016 IPR008893 WGR domain NHAM_RS19725 9fd6edcc0af75f44bd07d4aded797cd1 74 SMART SM00773 2 72 6.2E-4 T 22-04-2016 IPR008893 WGR domain NHAM_RS19725 9fd6edcc0af75f44bd07d4aded797cd1 74 Pfam PF05406 WGR domain 4 74 2.1E-14 T 22-04-2016 IPR008893 WGR domain NHAM_RS19725 9fd6edcc0af75f44bd07d4aded797cd1 74 Gene3D G3DSA:2.20.140.10 5 74 5.2E-13 T 22-04-2016 IPR008893 WGR domain NHAM_RS11165 aa8918213719261756b16a1797c248f9 225 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 17 204 2.6E-60 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 NHAM_RS11165 aa8918213719261756b16a1797c248f9 225 PANTHER PTHR30098 7 203 1.9E-75 T 22-04-2016 NHAM_RS11165 aa8918213719261756b16a1797c248f9 225 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 13 185 1.8E-66 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 NHAM_RS11165 aa8918213719261756b16a1797c248f9 225 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 225 85.418 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 NHAM_RS11165 aa8918213719261756b16a1797c248f9 225 SUPERFAMILY SSF55729 7 204 1.59E-77 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS11635 4ed23d17a679793eb293948e030f6f2e 198 PANTHER PTHR30309:SF0 3 197 2.9E-71 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 NHAM_RS11635 4ed23d17a679793eb293948e030f6f2e 198 PANTHER PTHR30309 3 197 2.9E-71 T 22-04-2016 NHAM_RS11635 4ed23d17a679793eb293948e030f6f2e 198 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 9 195 20.433 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 NHAM_RS11635 4ed23d17a679793eb293948e030f6f2e 198 Pfam PF02660 Glycerol-3-phosphate acyltransferase 13 186 6.2E-53 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 NHAM_RS11635 4ed23d17a679793eb293948e030f6f2e 198 SMART SM01207 12 187 1.8E-87 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 NHAM_RS11635 4ed23d17a679793eb293948e030f6f2e 198 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 196 1.0E-54 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 Pfam PF01751 Toprim domain 212 290 2.1E-9 T 22-04-2016 IPR006171 Toprim domain NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 SMART SM00433 1 290 3.5E-17 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 SUPERFAMILY SSF56719 187 290 9.15E-41 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 Pfam PF00204 DNA gyrase B 16 183 9.2E-55 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 Gene3D G3DSA:3.40.50.670 183 290 2.6E-50 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 PRINTS PR01159 DNA gyrase subunit B signature 263 272 3.0E-41 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 PRINTS PR01159 DNA gyrase subunit B signature 15 37 3.0E-41 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 PRINTS PR01159 DNA gyrase subunit B signature 105 121 3.0E-41 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 PRINTS PR01159 DNA gyrase subunit B signature 167 187 3.0E-41 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 PRINTS PR01159 DNA gyrase subunit B signature 153 167 3.0E-41 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 ProSitePatterns PS00177 DNA topoisomerase II signature. 215 223 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 PRINTS PR00418 DNA topoisomerase II family signature 63 76 4.8E-15 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 PRINTS PR00418 DNA topoisomerase II family signature 213 227 4.8E-15 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 PRINTS PR00418 DNA topoisomerase II family signature 280 290 4.8E-15 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 SUPERFAMILY SSF54211 16 184 8.54E-57 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 PANTHER PTHR10169 13 290 2.0E-122 T 22-04-2016 NHAM_RS20765 76ce02d0e837c5e2d63a41d091b492c3 290 Gene3D G3DSA:3.30.230.10 15 182 2.3E-69 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS01140 dae1fff7de493547c36f644c7647043d 169 Pfam PF02566 OsmC-like protein 64 165 1.1E-18 T 22-04-2016 IPR003718 OsmC/Ohr family NHAM_RS01140 dae1fff7de493547c36f644c7647043d 169 SUPERFAMILY SSF82784 8 166 1.13E-34 T 22-04-2016 IPR003718 OsmC/Ohr family NHAM_RS01140 dae1fff7de493547c36f644c7647043d 169 Gene3D G3DSA:3.30.300.20 2 157 8.1E-44 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta NHAM_RS01140 dae1fff7de493547c36f644c7647043d 169 PANTHER PTHR35368:SF1 1 169 2.9E-40 T 22-04-2016 NHAM_RS01140 dae1fff7de493547c36f644c7647043d 169 PANTHER PTHR35368 1 169 2.9E-40 T 22-04-2016 NHAM_RS10825 fa76e8e613a7b633bd4fbd188fa73934 139 Pfam PF11836 Phage tail tube protein, GTA-gp10 50 128 8.1E-18 T 22-04-2016 IPR021791 Phage tail tube protein, GTA-gp10 NHAM_RS18435 958b71ad437cd75b2f3b14e7ced0ab21 370 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 361 2.7E-127 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NHAM_RS18435 958b71ad437cd75b2f3b14e7ced0ab21 370 PANTHER PTHR11835 3 368 1.7E-175 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 NHAM_RS18435 958b71ad437cd75b2f3b14e7ced0ab21 370 SMART SM01329 5 361 2.9E-176 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NHAM_RS18435 958b71ad437cd75b2f3b14e7ced0ab21 370 PANTHER PTHR11835:SF35 3 368 1.7E-175 T 22-04-2016 NHAM_RS18435 958b71ad437cd75b2f3b14e7ced0ab21 370 Gene3D G3DSA:3.40.718.10 2 366 5.5E-119 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 NHAM_RS18435 958b71ad437cd75b2f3b14e7ced0ab21 370 SUPERFAMILY SSF53659 2 366 1.78E-111 T 22-04-2016 NHAM_RS18435 958b71ad437cd75b2f3b14e7ced0ab21 370 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 361 1.6E-134 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 NHAM_RS18435 958b71ad437cd75b2f3b14e7ced0ab21 370 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 365 46.873 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 NHAM_RS18435 958b71ad437cd75b2f3b14e7ced0ab21 370 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 246 265 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 NHAM_RS05660 0dbf117fb36822102920e3f71490e501 285 Gene3D G3DSA:3.40.192.10 5 110 2.5E-29 T 22-04-2016 NHAM_RS05660 0dbf117fb36822102920e3f71490e501 285 Gene3D G3DSA:3.40.50.720 111 273 2.9E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05660 0dbf117fb36822102920e3f71490e501 285 SUPERFAMILY SSF51735 107 275 1.83E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS05660 0dbf117fb36822102920e3f71490e501 285 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 13 94 6.4E-22 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS05660 0dbf117fb36822102920e3f71490e501 285 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 12 271 1.5E-60 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS05660 0dbf117fb36822102920e3f71490e501 285 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 127 195 3.7E-9 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase NHAM_RS05660 0dbf117fb36822102920e3f71490e501 285 PANTHER PTHR21089 12 278 1.6E-82 T 22-04-2016 NHAM_RS05660 0dbf117fb36822102920e3f71490e501 285 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 8 276 30.427 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS05660 0dbf117fb36822102920e3f71490e501 285 SUPERFAMILY SSF53223 5 106 6.33E-25 T 22-04-2016 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 Gene3D G3DSA:1.10.10.350 376 471 2.0E-30 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 307 7.2E-96 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 2.1E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 2.1E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 2.1E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 2.1E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 2.1E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 PANTHER PTHR11451:SF41 5 313 1.5E-94 T 22-04-2016 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 Gene3D G3DSA:1.10.1160.10 236 317 3.1E-33 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 PANTHER PTHR11451 5 313 1.5E-94 T 22-04-2016 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 472 32.474 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 SUPERFAMILY SSF48163 302 470 1.96E-38 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 470 3.9E-153 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 Gene3D G3DSA:3.90.800.10 70 183 2.8E-33 T 22-04-2016 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 SUPERFAMILY SSF52374 5 301 6.44E-109 T 22-04-2016 NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 Gene3D G3DSA:3.40.50.620 5 69 1.0E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS08725 8f0bf33155afac0e37ed11eb1960c8e3 474 Gene3D G3DSA:3.40.50.620 184 233 1.0E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS06790 0646ff056e2ca4a48040d77141f8d7be 452 Gene3D G3DSA:3.50.50.60 342 394 1.7E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS06790 0646ff056e2ca4a48040d77141f8d7be 452 Gene3D G3DSA:3.50.50.60 171 251 1.7E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS06790 0646ff056e2ca4a48040d77141f8d7be 452 Gene3D G3DSA:3.50.50.60 18 118 1.7E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS06790 0646ff056e2ca4a48040d77141f8d7be 452 PANTHER PTHR13847:SF196 17 397 3.4E-90 T 22-04-2016 NHAM_RS06790 0646ff056e2ca4a48040d77141f8d7be 452 PANTHER PTHR13847 17 397 3.4E-90 T 22-04-2016 NHAM_RS06790 0646ff056e2ca4a48040d77141f8d7be 452 Pfam PF01266 FAD dependent oxidoreductase 29 377 2.0E-43 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NHAM_RS06790 0646ff056e2ca4a48040d77141f8d7be 452 SUPERFAMILY SSF51905 28 253 1.94E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS06790 0646ff056e2ca4a48040d77141f8d7be 452 SUPERFAMILY SSF51905 342 397 1.94E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS23805 d8e0bdbbb6a285ad2ce91b42722f8da5 563 PANTHER PTHR30349 266 556 1.7E-13 T 22-04-2016 NHAM_RS23805 d8e0bdbbb6a285ad2ce91b42722f8da5 563 Gene3D G3DSA:1.10.443.10 360 528 4.2E-10 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS23805 d8e0bdbbb6a285ad2ce91b42722f8da5 563 SUPERFAMILY SSF56349 250 528 9.42E-29 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS23805 d8e0bdbbb6a285ad2ce91b42722f8da5 563 Gene3D G3DSA:1.10.150.130 250 350 1.0E-5 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS23500 e194df287d9025dca90c947efc2dc2b3 76 Gene3D G3DSA:3.40.50.300 1 54 8.6E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS23500 e194df287d9025dca90c947efc2dc2b3 76 SUPERFAMILY SSF52540 1 38 4.96E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01390 a83c1a27275a365898a393afe935ca6d 409 Pfam PF00155 Aminotransferase class I and II 46 390 1.8E-75 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NHAM_RS01390 a83c1a27275a365898a393afe935ca6d 409 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 1 401 2.1E-208 T 22-04-2016 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: REACT_9431|UniPathway: UPA00251 NHAM_RS01390 a83c1a27275a365898a393afe935ca6d 409 Gene3D G3DSA:3.90.1150.10 281 395 7.6E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS01390 a83c1a27275a365898a393afe935ca6d 409 PANTHER PTHR13693 2 409 7.7E-229 T 22-04-2016 NHAM_RS01390 a83c1a27275a365898a393afe935ca6d 409 PANTHER PTHR13693:SF57 2 409 7.7E-229 T 22-04-2016 NHAM_RS01390 a83c1a27275a365898a393afe935ca6d 409 Gene3D G3DSA:3.40.640.10 64 280 6.2E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS01390 a83c1a27275a365898a393afe935ca6d 409 SUPERFAMILY SSF53383 2 398 4.71E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS01390 a83c1a27275a365898a393afe935ca6d 409 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 244 253 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 NHAM_RS13940 51e7c54f53c1ec4bdb056e4509e34374 339 PANTHER PTHR21371 1 338 4.0E-192 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS13940 51e7c54f53c1ec4bdb056e4509e34374 339 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 328 1.9E-133 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS13940 51e7c54f53c1ec4bdb056e4509e34374 339 SUPERFAMILY SSF51735 1 183 7.31E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS13940 51e7c54f53c1ec4bdb056e4509e34374 339 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 5.7E-67 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS13940 51e7c54f53c1ec4bdb056e4509e34374 339 SUPERFAMILY SSF48179 184 333 6.63E-72 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS13940 51e7c54f53c1ec4bdb056e4509e34374 339 Gene3D G3DSA:1.10.1040.10 29 326 4.1E-116 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NHAM_RS13940 51e7c54f53c1ec4bdb056e4509e34374 339 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 329 45.229 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS13940 51e7c54f53c1ec4bdb056e4509e34374 339 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 178 6.2E-73 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 NHAM_RS07490 cc36250236b421f8de6c24f131a8c0d9 657 Gene3D G3DSA:3.20.20.80 74 111 9.6E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07490 cc36250236b421f8de6c24f131a8c0d9 657 Gene3D G3DSA:3.20.20.80 168 558 9.6E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NHAM_RS07490 cc36250236b421f8de6c24f131a8c0d9 657 Pfam PF00128 Alpha amylase, catalytic domain 228 328 6.0E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NHAM_RS07490 cc36250236b421f8de6c24f131a8c0d9 657 PANTHER PTHR10357:SF137 172 645 1.6E-226 T 22-04-2016 NHAM_RS07490 cc36250236b421f8de6c24f131a8c0d9 657 PANTHER PTHR10357:SF137 27 146 1.6E-226 T 22-04-2016 NHAM_RS07490 cc36250236b421f8de6c24f131a8c0d9 657 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 19 657 43.002 T 22-04-2016 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 NHAM_RS07490 cc36250236b421f8de6c24f131a8c0d9 657 PANTHER PTHR10357 172 645 1.6E-226 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07490 cc36250236b421f8de6c24f131a8c0d9 657 PANTHER PTHR10357 27 146 1.6E-226 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 NHAM_RS07490 cc36250236b421f8de6c24f131a8c0d9 657 SUPERFAMILY SSF51445 205 559 3.58E-84 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily NHAM_RS07490 cc36250236b421f8de6c24f131a8c0d9 657 SMART SM00642 209 553 1.4E-4 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 NHAM_RS07490 cc36250236b421f8de6c24f131a8c0d9 657 Pfam PF11896 Domain of unknown function (DUF3416) 23 199 2.0E-54 T 22-04-2016 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 NHAM_RS07425 ce9b27d765bacb8b38e2f3f3676dd50c 161 PANTHER PTHR11908:SF66 2 140 9.8E-39 T 22-04-2016 NHAM_RS07425 ce9b27d765bacb8b38e2f3f3676dd50c 161 Gene3D G3DSA:1.10.150.120 76 157 2.0E-31 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NHAM_RS07425 ce9b27d765bacb8b38e2f3f3676dd50c 161 Pfam PF01799 [2Fe-2S] binding domain 74 147 1.8E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NHAM_RS07425 ce9b27d765bacb8b38e2f3f3676dd50c 161 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 55 1.5E-6 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS07425 ce9b27d765bacb8b38e2f3f3676dd50c 161 Gene3D G3DSA:3.10.20.30 3 75 1.0E-27 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS07425 ce9b27d765bacb8b38e2f3f3676dd50c 161 SUPERFAMILY SSF54292 3 79 6.29E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS07425 ce9b27d765bacb8b38e2f3f3676dd50c 161 SUPERFAMILY SSF47741 85 156 2.36E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NHAM_RS07425 ce9b27d765bacb8b38e2f3f3676dd50c 161 PANTHER PTHR11908 2 140 9.8E-39 T 22-04-2016 NHAM_RS14580 91838cf5dab825bd50376daf5799f629 67 PIRSF PIRSF002599 1 67 1.3E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 NHAM_RS14580 91838cf5dab825bd50376daf5799f629 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.4E-25 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS14580 91838cf5dab825bd50376daf5799f629 67 SMART SM00357 3 67 2.0E-25 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS14580 91838cf5dab825bd50376daf5799f629 67 Gene3D G3DSA:2.40.50.140 2 66 1.5E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS14580 91838cf5dab825bd50376daf5799f629 67 PANTHER PTHR11544 2 66 1.2E-24 T 22-04-2016 NHAM_RS14580 91838cf5dab825bd50376daf5799f629 67 PRINTS PR00050 Cold shock protein signature 40 58 3.2E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS14580 91838cf5dab825bd50376daf5799f629 67 PRINTS PR00050 Cold shock protein signature 4 19 3.2E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS14580 91838cf5dab825bd50376daf5799f629 67 PRINTS PR00050 Cold shock protein signature 25 34 3.2E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS14580 91838cf5dab825bd50376daf5799f629 67 SUPERFAMILY SSF50249 2 65 2.12E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS14580 91838cf5dab825bd50376daf5799f629 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site NHAM_RS13490 6e0a1d0444168e8fb36c1b251f4b1d9b 121 PANTHER PTHR20941 5 120 1.9E-29 T 22-04-2016 NHAM_RS13490 6e0a1d0444168e8fb36c1b251f4b1d9b 121 Pfam PF02152 Dihydroneopterin aldolase 5 117 1.2E-32 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NHAM_RS13490 6e0a1d0444168e8fb36c1b251f4b1d9b 121 Gene3D G3DSA:3.30.1130.10 3 120 1.0E-39 T 22-04-2016 NHAM_RS13490 6e0a1d0444168e8fb36c1b251f4b1d9b 121 SMART SM00905 5 118 7.4E-45 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NHAM_RS13490 6e0a1d0444168e8fb36c1b251f4b1d9b 121 TIGRFAM TIGR00526 folB_dom: FolB domain 5 120 1.3E-27 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NHAM_RS13490 6e0a1d0444168e8fb36c1b251f4b1d9b 121 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 118 6.6E-35 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 NHAM_RS13490 6e0a1d0444168e8fb36c1b251f4b1d9b 121 SUPERFAMILY SSF55620 1 120 2.18E-34 T 22-04-2016 NHAM_RS03300 1d4b0c3c5bc50675d73bc792b2266f20 329 PANTHER PTHR30425 1 329 9.7E-152 T 22-04-2016 NHAM_RS03300 1d4b0c3c5bc50675d73bc792b2266f20 329 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 28 322 3.2E-91 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 NHAM_RS03300 1d4b0c3c5bc50675d73bc792b2266f20 329 SUPERFAMILY SSF161098 41 315 9.16E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS03300 1d4b0c3c5bc50675d73bc792b2266f20 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 318 6.5E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS03300 1d4b0c3c5bc50675d73bc792b2266f20 329 Gene3D G3DSA:1.10.3720.10 38 326 9.4E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS03300 1d4b0c3c5bc50675d73bc792b2266f20 329 PANTHER PTHR30425:SF1 1 329 9.7E-152 T 22-04-2016 NHAM_RS02150 4675ad6eaf9f345f4299816ae109a949 59 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 1 47 2.8E-15 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 NHAM_RS02150 4675ad6eaf9f345f4299816ae109a949 59 Pfam PF04995 Heme exporter protein D (CcmD) 4 46 1.3E-13 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 NHAM_RS01225 6aeacaa776b612cab6b7b14cff5a9105 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.4E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS01225 6aeacaa776b612cab6b7b14cff5a9105 287 Pfam PF03466 LysR substrate binding domain 89 277 1.4E-31 T 22-04-2016 IPR005119 LysR, substrate-binding NHAM_RS01225 6aeacaa776b612cab6b7b14cff5a9105 287 Gene3D G3DSA:1.10.10.10 2 85 5.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS01225 6aeacaa776b612cab6b7b14cff5a9105 287 SUPERFAMILY SSF46785 2 110 1.09E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS01225 6aeacaa776b612cab6b7b14cff5a9105 287 PANTHER PTHR30579:SF0 1 284 8.9E-102 T 22-04-2016 NHAM_RS01225 6aeacaa776b612cab6b7b14cff5a9105 287 Gene3D G3DSA:3.40.190.10 89 185 1.5E-19 T 22-04-2016 NHAM_RS01225 6aeacaa776b612cab6b7b14cff5a9105 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS01225 6aeacaa776b612cab6b7b14cff5a9105 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS01225 6aeacaa776b612cab6b7b14cff5a9105 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS01225 6aeacaa776b612cab6b7b14cff5a9105 287 SUPERFAMILY SSF53850 90 282 8.22E-28 T 22-04-2016 NHAM_RS01225 6aeacaa776b612cab6b7b14cff5a9105 287 PANTHER PTHR30579 1 284 8.9E-102 T 22-04-2016 NHAM_RS01225 6aeacaa776b612cab6b7b14cff5a9105 287 Gene3D G3DSA:3.40.190.10 186 237 8.8E-10 T 22-04-2016 NHAM_RS23725 03b63d5be8fa319f0b47f71e74b09859 99 Gene3D G3DSA:3.40.50.620 1 99 3.6E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS23725 03b63d5be8fa319f0b47f71e74b09859 99 PANTHER PTHR11946:SF7 1 99 8.0E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS23725 03b63d5be8fa319f0b47f71e74b09859 99 PRINTS PR00985 Leucyl-tRNA synthetase signature 19 36 1.9E-13 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS23725 03b63d5be8fa319f0b47f71e74b09859 99 PRINTS PR00985 Leucyl-tRNA synthetase signature 45 61 1.9E-13 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS23725 03b63d5be8fa319f0b47f71e74b09859 99 PRINTS PR00985 Leucyl-tRNA synthetase signature 77 90 1.9E-13 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 NHAM_RS23725 03b63d5be8fa319f0b47f71e74b09859 99 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 1 63 3.0E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS23725 03b63d5be8fa319f0b47f71e74b09859 99 SUPERFAMILY SSF52374 1 99 1.21E-29 T 22-04-2016 NHAM_RS23725 03b63d5be8fa319f0b47f71e74b09859 99 PANTHER PTHR11946 1 99 8.0E-52 T 22-04-2016 NHAM_RS19900 caa2bb726ec67e9454e41093938381d0 757 SUPERFAMILY SSF55781 608 747 1.2E-19 T 22-04-2016 IPR029016 GAF domain-like NHAM_RS19900 caa2bb726ec67e9454e41093938381d0 757 Pfam PF01590 GAF domain 608 743 7.5E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 NHAM_RS19900 caa2bb726ec67e9454e41093938381d0 757 Gene3D G3DSA:3.30.450.40 606 747 3.7E-16 T 22-04-2016 IPR029016 GAF domain-like NHAM_RS19900 caa2bb726ec67e9454e41093938381d0 757 Pfam PF01594 Domain of unknown function DUF20 16 342 1.5E-42 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like NHAM_RS19900 caa2bb726ec67e9454e41093938381d0 757 PANTHER PTHR21716 15 404 1.7E-41 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like NHAM_RS19900 caa2bb726ec67e9454e41093938381d0 757 SMART SM00065 606 757 0.0026 T 22-04-2016 IPR003018 GAF domain GO:0005515 NHAM_RS18720 18ae6071c19c2063622b8e60c7b38a29 244 Pfam PF00005 ABC transporter 21 169 1.4E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS18720 18ae6071c19c2063622b8e60c7b38a29 244 SMART SM00382 29 218 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS18720 18ae6071c19c2063622b8e60c7b38a29 244 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 218 240 1.9E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NHAM_RS18720 18ae6071c19c2063622b8e60c7b38a29 244 PANTHER PTHR24220 6 243 1.5E-98 T 22-04-2016 NHAM_RS18720 18ae6071c19c2063622b8e60c7b38a29 244 Gene3D G3DSA:3.40.50.300 2 239 1.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18720 18ae6071c19c2063622b8e60c7b38a29 244 PANTHER PTHR24220:SF358 6 243 1.5E-98 T 22-04-2016 NHAM_RS18720 18ae6071c19c2063622b8e60c7b38a29 244 SUPERFAMILY SSF52540 3 240 3.03E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00745 42bcdcfcb332b969d3b9c900e2140b08 386 SMART SM00729 9 229 9.7E-46 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NHAM_RS00745 42bcdcfcb332b969d3b9c900e2140b08 386 SUPERFAMILY SSF102114 7 384 1.7E-101 T 22-04-2016 NHAM_RS00745 42bcdcfcb332b969d3b9c900e2140b08 386 PANTHER PTHR13932 6 386 3.8E-130 T 22-04-2016 NHAM_RS00745 42bcdcfcb332b969d3b9c900e2140b08 386 Gene3D G3DSA:3.80.30.20 12 244 1.6E-27 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe NHAM_RS00745 42bcdcfcb332b969d3b9c900e2140b08 386 Pfam PF04055 Radical SAM superfamily 14 182 4.8E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NHAM_RS00745 42bcdcfcb332b969d3b9c900e2140b08 386 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 12 346 3.0E-83 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- NHAM_RS00745 42bcdcfcb332b969d3b9c900e2140b08 386 Pfam PF06969 HemN C-terminal domain 313 374 3.1E-9 T 22-04-2016 IPR010723 HemN, C-terminal NHAM_RS11745 7313aee484c06d2a19646c16dad6479f 140 Gene3D G3DSA:3.30.1330.40 6 139 3.4E-30 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NHAM_RS11745 7313aee484c06d2a19646c16dad6479f 140 Pfam PF01042 Endoribonuclease L-PSP 18 137 1.8E-16 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family NHAM_RS11745 7313aee484c06d2a19646c16dad6479f 140 SUPERFAMILY SSF55298 18 138 5.5E-24 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NHAM_RS11745 7313aee484c06d2a19646c16dad6479f 140 PANTHER PTHR11803 28 139 2.5E-14 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family NHAM_RS17060 2ef2ad282751104fd31daf2fe40f5068 171 Pfam PF04985 Phage tail tube protein FII 11 169 3.6E-41 T 22-04-2016 IPR006498 Tail tube protein NHAM_RS17060 2ef2ad282751104fd31daf2fe40f5068 171 PANTHER PTHR35861:SF2 12 149 2.5E-19 T 22-04-2016 NHAM_RS17060 2ef2ad282751104fd31daf2fe40f5068 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 8 153 2.0E-30 T 22-04-2016 IPR006498 Tail tube protein NHAM_RS17060 2ef2ad282751104fd31daf2fe40f5068 171 PANTHER PTHR35861 12 149 2.5E-19 T 22-04-2016 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 PANTHER PTHR30386 155 449 2.9E-47 T 22-04-2016 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 PANTHER PTHR30386:SF4 20 124 2.9E-47 T 22-04-2016 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 Pfam PF13533 Biotin-lipoyl like 80 117 1.3E-6 T 22-04-2016 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 Pfam PF13437 HlyD family secretion protein 303 403 5.4E-9 T 22-04-2016 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 PANTHER PTHR30386 20 124 2.9E-47 T 22-04-2016 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 PANTHER PTHR30386:SF4 155 449 2.9E-47 T 22-04-2016 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 SUPERFAMILY SSF111369 58 143 5.75E-7 T 22-04-2016 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 Gene3D G3DSA:2.40.50.100 78 103 2.4E-5 T 22-04-2016 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 29 448 7.4E-86 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 341 365 1.1E-25 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 1.1E-25 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 365 388 1.1E-25 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 329 1.1E-25 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 448 1.1E-25 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS05360 f3b5302785942285e9e2ecca783632af 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 413 428 1.1E-25 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS11130 458400f6c5d9ccc3e4770ce5b53304a9 255 PANTHER PTHR13887 22 249 5.0E-99 T 22-04-2016 NHAM_RS11130 458400f6c5d9ccc3e4770ce5b53304a9 255 Pfam PF01323 DSBA-like thioredoxin domain 100 245 4.5E-26 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 NHAM_RS11130 458400f6c5d9ccc3e4770ce5b53304a9 255 SUPERFAMILY SSF52833 75 245 1.07E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS11130 458400f6c5d9ccc3e4770ce5b53304a9 255 PANTHER PTHR13887:SF25 22 249 5.0E-99 T 22-04-2016 NHAM_RS11130 458400f6c5d9ccc3e4770ce5b53304a9 255 Gene3D G3DSA:3.40.30.10 77 248 1.0E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS06305 ee33526d724e5fdd3b3c18410ea03edc 161 SMART SM01001 2 153 1.8E-99 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 NHAM_RS06305 ee33526d724e5fdd3b3c18410ea03edc 161 PIRSF PIRSF001338 1 160 1.3E-65 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 NHAM_RS06305 ee33526d724e5fdd3b3c18410ea03edc 161 PANTHER PTHR23046 4 158 3.8E-82 T 22-04-2016 NHAM_RS06305 ee33526d724e5fdd3b3c18410ea03edc 161 PANTHER PTHR23046:SF2 4 158 3.8E-82 T 22-04-2016 NHAM_RS06305 ee33526d724e5fdd3b3c18410ea03edc 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 32.245 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 NHAM_RS06305 ee33526d724e5fdd3b3c18410ea03edc 161 Pfam PF00731 AIR carboxylase 4 151 9.5E-63 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 NHAM_RS06305 ee33526d724e5fdd3b3c18410ea03edc 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 156 1.1E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 NHAM_RS06305 ee33526d724e5fdd3b3c18410ea03edc 161 SUPERFAMILY SSF52255 3 157 1.83E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 NHAM_RS06305 ee33526d724e5fdd3b3c18410ea03edc 161 Gene3D G3DSA:3.40.50.7700 3 157 1.5E-71 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 NHAM_RS01990 e9e9d10af86e0f66c1073a85d19785c3 392 PANTHER PTHR30325 169 392 3.1E-202 T 22-04-2016 NHAM_RS01990 e9e9d10af86e0f66c1073a85d19785c3 392 PANTHER PTHR30325 27 145 3.1E-202 T 22-04-2016 NHAM_RS01990 e9e9d10af86e0f66c1073a85d19785c3 392 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 207 389 3.8E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS01990 e9e9d10af86e0f66c1073a85d19785c3 392 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 35 70 1.4E-7 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NHAM_RS01990 e9e9d10af86e0f66c1073a85d19785c3 392 Gene3D G3DSA:1.10.3720.10 183 387 1.8E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS01990 e9e9d10af86e0f66c1073a85d19785c3 392 SUPERFAMILY SSF161098 185 372 6.67E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS05355 da37e4fe20e8bc1c639f32718ba2d5eb 744 SUPERFAMILY SSF52540 479 722 3.06E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05355 da37e4fe20e8bc1c639f32718ba2d5eb 744 ProSitePatterns PS00211 ABC transporters family signature. 624 638 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS05355 da37e4fe20e8bc1c639f32718ba2d5eb 744 Pfam PF00005 ABC transporter 503 652 6.2E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS05355 da37e4fe20e8bc1c639f32718ba2d5eb 744 Gene3D G3DSA:3.90.70.10 15 144 8.6E-28 T 22-04-2016 NHAM_RS05355 da37e4fe20e8bc1c639f32718ba2d5eb 744 PANTHER PTHR24221 123 733 1.6E-164 T 22-04-2016 NHAM_RS05355 da37e4fe20e8bc1c639f32718ba2d5eb 744 Gene3D G3DSA:3.40.50.300 485 715 1.2E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS05355 da37e4fe20e8bc1c639f32718ba2d5eb 744 SUPERFAMILY SSF90123 160 451 1.96E-47 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS05355 da37e4fe20e8bc1c639f32718ba2d5eb 744 SUPERFAMILY SSF90123 628 636 1.96E-47 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS05355 da37e4fe20e8bc1c639f32718ba2d5eb 744 Pfam PF03412 Peptidase C39 family 18 143 4.7E-9 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 NHAM_RS05355 da37e4fe20e8bc1c639f32718ba2d5eb 744 Pfam PF00664 ABC transporter transmembrane region 174 437 9.9E-27 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NHAM_RS05355 da37e4fe20e8bc1c639f32718ba2d5eb 744 SMART SM00382 512 698 1.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS05355 da37e4fe20e8bc1c639f32718ba2d5eb 744 Gene3D G3DSA:1.20.1560.10 161 470 1.3E-52 T 22-04-2016 NHAM_RS19770 5b3c5c698385db1f8d8d4950247c1b25 178 PIRSF PIRSF024492 1 178 2.4E-64 T 22-04-2016 IPR014519 Uncharacterised conserved protein UCP024492 NHAM_RS19770 5b3c5c698385db1f8d8d4950247c1b25 178 Pfam PF04343 Protein of unknown function, DUF488 15 138 3.7E-32 T 22-04-2016 IPR007438 Protein of unknown function DUF488 NHAM_RS19770 5b3c5c698385db1f8d8d4950247c1b25 178 PANTHER PTHR39337 6 175 1.1E-53 T 22-04-2016 NHAM_RS19770 5b3c5c698385db1f8d8d4950247c1b25 178 PANTHER PTHR39337:SF1 6 175 1.1E-53 T 22-04-2016 NHAM_RS05035 537b14da9068fe21091a7d09cccb539e 400 SUPERFAMILY SSF51658 13 291 3.83E-24 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NHAM_RS05035 537b14da9068fe21091a7d09cccb539e 400 Gene3D G3DSA:3.20.20.150 294 333 4.8E-6 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NHAM_RS05035 537b14da9068fe21091a7d09cccb539e 400 Gene3D G3DSA:3.20.20.150 59 247 4.8E-6 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain NHAM_RS01075 1e0cb11f66d333504077ea9881015072 174 PANTHER PTHR38593:SF1 1 174 1.8E-45 T 22-04-2016 NHAM_RS01075 1e0cb11f66d333504077ea9881015072 174 PANTHER PTHR38593 1 174 1.8E-45 T 22-04-2016 NHAM_RS01075 1e0cb11f66d333504077ea9881015072 174 Gene3D G3DSA:1.20.1260.10 43 151 1.3E-4 T 22-04-2016 IPR012347 Ferritin-related NHAM_RS01075 1e0cb11f66d333504077ea9881015072 174 Pfam PF13628 Domain of unknown function (DUF4142) 27 167 1.7E-39 T 22-04-2016 IPR025419 Domain of unknown function DUF4142 NHAM_RS10440 90b4138f38c9cff00c16369d3a4bd042 599 PANTHER PTHR30290:SF2 7 354 2.4E-195 T 22-04-2016 NHAM_RS10440 90b4138f38c9cff00c16369d3a4bd042 599 PANTHER PTHR30290:SF2 382 592 2.4E-195 T 22-04-2016 NHAM_RS10440 90b4138f38c9cff00c16369d3a4bd042 599 Gene3D G3DSA:3.90.76.10 63 215 2.7E-33 T 22-04-2016 NHAM_RS10440 90b4138f38c9cff00c16369d3a4bd042 599 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 98 508 2.9E-76 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain NHAM_RS10440 90b4138f38c9cff00c16369d3a4bd042 599 SUPERFAMILY SSF53850 48 593 3.26E-117 T 22-04-2016 NHAM_RS10440 90b4138f38c9cff00c16369d3a4bd042 599 PANTHER PTHR30290 382 592 2.4E-195 T 22-04-2016 NHAM_RS10440 90b4138f38c9cff00c16369d3a4bd042 599 PANTHER PTHR30290 7 354 2.4E-195 T 22-04-2016 NHAM_RS10440 90b4138f38c9cff00c16369d3a4bd042 599 Gene3D G3DSA:3.10.105.10 310 562 4.3E-44 T 22-04-2016 NHAM_RS10440 90b4138f38c9cff00c16369d3a4bd042 599 PIRSF PIRSF002741 5 596 1.6E-99 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 NHAM_RS08290 7c22fe0c850b5793545512b85a417909 132 SUPERFAMILY SSF54593 2 130 6.3E-13 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS08290 7c22fe0c850b5793545512b85a417909 132 PANTHER PTHR35006 1 129 1.8E-22 T 22-04-2016 NHAM_RS08290 7c22fe0c850b5793545512b85a417909 132 Gene3D G3DSA:3.10.180.10 1 129 6.2E-17 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS20025 cb2a5d16e7b1598225ff37afc03ba5c0 269 PANTHER PTHR41251 4 241 3.4E-43 T 22-04-2016 NHAM_RS20025 cb2a5d16e7b1598225ff37afc03ba5c0 269 PIRSF PIRSF006493 1 269 9.1E-84 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NHAM_RS20025 cb2a5d16e7b1598225ff37afc03ba5c0 269 SUPERFAMILY SSF100939 3 246 1.84E-48 T 22-04-2016 IPR016194 SPOC-like, C-terminal domain NHAM_RS20025 cb2a5d16e7b1598225ff37afc03ba5c0 269 PANTHER PTHR41251:SF1 4 241 3.4E-43 T 22-04-2016 NHAM_RS20025 cb2a5d16e7b1598225ff37afc03ba5c0 269 TIGRFAM TIGR02772 Ku_bact: Ku protein 4 244 3.0E-85 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NHAM_RS20025 cb2a5d16e7b1598225ff37afc03ba5c0 269 SMART SM00559 55 184 2.5E-27 T 22-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 NHAM_RS20025 cb2a5d16e7b1598225ff37afc03ba5c0 269 Pfam PF02735 Ku70/Ku80 beta-barrel domain 14 176 2.8E-36 T 22-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 NHAM_RS20025 cb2a5d16e7b1598225ff37afc03ba5c0 269 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 3 242 28.293 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NHAM_RS20025 cb2a5d16e7b1598225ff37afc03ba5c0 269 Gene3D G3DSA:2.40.290.10 5 152 2.6E-15 T 22-04-2016 IPR016194 SPOC-like, C-terminal domain NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 SUPERFAMILY SSF52096 8 317 2.19E-89 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 PANTHER PTHR22855:SF42 8 317 1.1E-104 T 22-04-2016 NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 8 318 46.353 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 6 317 5.2E-115 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 Gene3D G3DSA:3.90.226.10 58 272 4.0E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 8 150 4.4E-57 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 PANTHER PTHR22855 8 317 1.1E-104 T 22-04-2016 NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 90 101 8.0E-38 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 155 168 8.0E-38 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 171 184 8.0E-38 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 199 208 8.0E-38 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 115 133 8.0E-38 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS02520 493dcb6d9651fb3a1c7b31c68ad2769e 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 136 152 8.0E-38 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS06565 46457f18e43e5e0b7f269dbf70553567 318 Gene3D G3DSA:3.30.230.20 5 129 1.3E-38 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 NHAM_RS06565 46457f18e43e5e0b7f269dbf70553567 318 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 6 278 7.0E-95 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 NHAM_RS06565 46457f18e43e5e0b7f269dbf70553567 318 PANTHER PTHR33694 5 313 2.0E-104 T 22-04-2016 NHAM_RS06565 46457f18e43e5e0b7f269dbf70553567 318 Gene3D G3DSA:3.30.1700.10 132 285 7.6E-50 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 NHAM_RS06565 46457f18e43e5e0b7f269dbf70553567 318 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5 290 5.2E-87 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 NHAM_RS06565 46457f18e43e5e0b7f269dbf70553567 318 SUPERFAMILY SSF54211 137 280 2.05E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS06565 46457f18e43e5e0b7f269dbf70553567 318 PANTHER PTHR33694:SF1 5 313 2.0E-104 T 22-04-2016 NHAM_RS06565 46457f18e43e5e0b7f269dbf70553567 318 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 4 283 40.129 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 NHAM_RS06565 46457f18e43e5e0b7f269dbf70553567 318 SUPERFAMILY SSF54211 5 128 1.52E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS24125 a290e756a2bb1287878dacd9cc9eb447 318 Pfam PF07120 Protein of unknown function (DUF1376) 17 103 5.6E-7 T 22-04-2016 IPR010781 Protein of unknown function DUF1376 NHAM_RS08085 ea4498a0839fd8ef0018be4e1ecc82ef 113 SUPERFAMILY SSF69118 4 110 1.83E-28 T 22-04-2016 IPR029032 AhpD-like NHAM_RS08085 ea4498a0839fd8ef0018be4e1ecc82ef 113 Pfam PF02627 Carboxymuconolactone decarboxylase family 25 105 1.9E-20 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NHAM_RS08085 ea4498a0839fd8ef0018be4e1ecc82ef 113 PANTHER PTHR33930 3 112 3.2E-26 T 22-04-2016 NHAM_RS08085 ea4498a0839fd8ef0018be4e1ecc82ef 113 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 40 90 5.6E-18 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NHAM_RS08085 ea4498a0839fd8ef0018be4e1ecc82ef 113 PANTHER PTHR33930:SF2 3 112 3.2E-26 T 22-04-2016 NHAM_RS08085 ea4498a0839fd8ef0018be4e1ecc82ef 113 Gene3D G3DSA:1.20.1290.10 3 109 1.5E-34 T 22-04-2016 IPR029032 AhpD-like NHAM_RS14235 15f7b1c421f12b66f32053234c1043d3 329 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 325 52.522 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 NHAM_RS14235 15f7b1c421f12b66f32053234c1043d3 329 PANTHER PTHR10366 5 327 8.9E-183 T 22-04-2016 NHAM_RS14235 15f7b1c421f12b66f32053234c1043d3 329 Gene3D G3DSA:3.90.25.10 190 327 5.3E-48 T 22-04-2016 NHAM_RS14235 15f7b1c421f12b66f32053234c1043d3 329 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 315 4.2E-123 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14235 15f7b1c421f12b66f32053234c1043d3 329 Gene3D G3DSA:3.40.50.720 2 186 5.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14235 15f7b1c421f12b66f32053234c1043d3 329 PANTHER PTHR10366:SF32 5 327 8.9E-183 T 22-04-2016 NHAM_RS14235 15f7b1c421f12b66f32053234c1043d3 329 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 5 321 5.2E-133 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 NHAM_RS14235 15f7b1c421f12b66f32053234c1043d3 329 SUPERFAMILY SSF51735 4 322 7.24E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS03210 8420e9ac23044c2f2f83af96a59132e8 163 Gene3D G3DSA:1.10.10.10 25 94 1.4E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03210 8420e9ac23044c2f2f83af96a59132e8 163 Pfam PF01475 Ferric uptake regulator family 35 146 5.2E-12 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 NHAM_RS03210 8420e9ac23044c2f2f83af96a59132e8 163 PANTHER PTHR33202:SF6 1 162 3.0E-70 T 22-04-2016 NHAM_RS03210 8420e9ac23044c2f2f83af96a59132e8 163 PANTHER PTHR33202 1 162 3.0E-70 T 22-04-2016 NHAM_RS03210 8420e9ac23044c2f2f83af96a59132e8 163 SUPERFAMILY SSF46785 26 157 1.03E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS11445 6d00878ac8f70707f7f92e5bebd0f661 115 PANTHER PTHR33154:SF5 1 101 5.5E-20 T 22-04-2016 NHAM_RS11445 6d00878ac8f70707f7f92e5bebd0f661 115 PANTHER PTHR33154 1 101 5.5E-20 T 22-04-2016 NHAM_RS11445 6d00878ac8f70707f7f92e5bebd0f661 115 Gene3D G3DSA:1.10.10.10 2 110 7.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS11445 6d00878ac8f70707f7f92e5bebd0f661 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 7.4E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS11445 6d00878ac8f70707f7f92e5bebd0f661 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 7.4E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS11445 6d00878ac8f70707f7f92e5bebd0f661 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 7.4E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS11445 6d00878ac8f70707f7f92e5bebd0f661 115 Pfam PF12840 Helix-turn-helix domain 10 68 2.3E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS11445 6d00878ac8f70707f7f92e5bebd0f661 115 SUPERFAMILY SSF46785 2 93 3.29E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS11445 6d00878ac8f70707f7f92e5bebd0f661 115 SMART SM00418 8 89 4.9E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NHAM_RS13470 53f31b8bc1c5512d52fd26562176b32a 522 SUPERFAMILY SSF52540 8 391 2.32E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13470 53f31b8bc1c5512d52fd26562176b32a 522 PANTHER PTHR30121:SF3 30 449 1.5E-182 T 22-04-2016 NHAM_RS13470 53f31b8bc1c5512d52fd26562176b32a 522 PANTHER PTHR30121 30 449 1.5E-182 T 22-04-2016 NHAM_RS13470 53f31b8bc1c5512d52fd26562176b32a 522 Pfam PF05872 Bacterial protein of unknown function (DUF853) 17 506 7.3E-228 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal NHAM_RS13470 53f31b8bc1c5512d52fd26562176b32a 522 Gene3D G3DSA:3.40.50.300 14 116 1.7E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13470 53f31b8bc1c5512d52fd26562176b32a 522 Gene3D G3DSA:3.40.50.300 212 389 1.7E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 PANTHER PTHR26402:SF598 3 198 1.6E-64 T 22-04-2016 NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 196 6.2E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 SUPERFAMILY SSF46894 140 203 2.64E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 SMART SM00448 3 115 6.5E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 9.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 9.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 9.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 SMART SM00421 139 196 1.6E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 PANTHER PTHR26402 3 198 1.6E-64 T 22-04-2016 NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 SUPERFAMILY SSF52172 5 155 4.98E-35 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 Gene3D G3DSA:1.10.10.10 148 205 3.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 Gene3D G3DSA:3.40.50.2300 5 147 5.7E-35 T 22-04-2016 NHAM_RS04510 844ca576abc9c0200b9acb4d3a216057 210 Pfam PF00072 Response regulator receiver domain 5 115 2.4E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS18525 ace9861658df80affddc7f72753cc796 476 Pfam PF00083 Sugar (and other) transporter 59 430 4.2E-41 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NHAM_RS18525 ace9861658df80affddc7f72753cc796 476 PANTHER PTHR24064 63 453 4.8E-81 T 22-04-2016 NHAM_RS18525 ace9861658df80affddc7f72753cc796 476 SUPERFAMILY SSF103473 8 465 2.49E-68 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS18525 ace9861658df80affddc7f72753cc796 476 PANTHER PTHR24064:SF172 63 453 4.8E-81 T 22-04-2016 NHAM_RS18525 ace9861658df80affddc7f72753cc796 476 Gene3D G3DSA:1.20.1250.20 270 455 1.8E-17 T 22-04-2016 NHAM_RS18525 ace9861658df80affddc7f72753cc796 476 Gene3D G3DSA:1.20.1250.20 54 212 1.5E-27 T 22-04-2016 NHAM_RS11185 d82bd499c18dd4aaa522dcf653278055 519 Pfam PF04234 CopC domain 18 109 9.2E-20 T 22-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 NHAM_RS11185 d82bd499c18dd4aaa522dcf653278055 519 Pfam PF05425 Copper resistance protein D 301 400 2.7E-24 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 NHAM_RS11185 d82bd499c18dd4aaa522dcf653278055 519 Gene3D G3DSA:2.60.40.1220 17 109 3.4E-21 T 22-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like NHAM_RS11185 d82bd499c18dd4aaa522dcf653278055 519 SUPERFAMILY SSF81296 17 110 3.29E-21 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS11185 d82bd499c18dd4aaa522dcf653278055 519 PANTHER PTHR34820:SF2 5 519 3.0E-78 T 22-04-2016 NHAM_RS11185 d82bd499c18dd4aaa522dcf653278055 519 PANTHER PTHR34820 5 519 3.0E-78 T 22-04-2016 NHAM_RS17170 114cd34c464a445fcdad4e19c143a03d 515 Pfam PF13481 AAA domain 265 446 1.9E-10 T 22-04-2016 NHAM_RS17170 114cd34c464a445fcdad4e19c143a03d 515 SUPERFAMILY SSF52540 258 333 8.6E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17170 114cd34c464a445fcdad4e19c143a03d 515 SUPERFAMILY SSF52540 360 499 8.6E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17170 114cd34c464a445fcdad4e19c143a03d 515 Gene3D G3DSA:3.40.50.300 284 503 1.9E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17170 114cd34c464a445fcdad4e19c143a03d 515 Pfam PF13662 Toprim domain 104 205 1.4E-8 T 22-04-2016 IPR006171 Toprim domain NHAM_RS17170 114cd34c464a445fcdad4e19c143a03d 515 Gene3D G3DSA:3.40.1360.10 83 240 2.6E-27 T 22-04-2016 NHAM_RS17170 114cd34c464a445fcdad4e19c143a03d 515 PANTHER PTHR12873 162 473 1.7E-61 T 22-04-2016 IPR027032 Twinkle-like protein GO:0003697|GO:0043139 NHAM_RS17170 114cd34c464a445fcdad4e19c143a03d 515 PANTHER PTHR12873 1 133 1.7E-61 T 22-04-2016 IPR027032 Twinkle-like protein GO:0003697|GO:0043139 NHAM_RS12460 2716f7762270358b9e15f180d4c42998 55 SUPERFAMILY SSF57829 1 53 6.71E-16 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 NHAM_RS12460 2716f7762270358b9e15f180d4c42998 55 PANTHER PTHR15238 1 55 3.5E-19 T 22-04-2016 NHAM_RS12460 2716f7762270358b9e15f180d4c42998 55 Pfam PF00471 Ribosomal protein L33 7 53 1.7E-13 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12460 2716f7762270358b9e15f180d4c42998 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 4.1E-17 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS04145 b7881aaa8711bb452e5c5cc13bd628cd 90 SUPERFAMILY SSF47413 11 76 7.78E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS04145 b7881aaa8711bb452e5c5cc13bd628cd 90 Gene3D G3DSA:1.10.260.40 3 74 3.7E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS04145 b7881aaa8711bb452e5c5cc13bd628cd 90 Pfam PF13560 Helix-turn-helix domain 19 69 5.3E-9 T 22-04-2016 NHAM_RS04145 b7881aaa8711bb452e5c5cc13bd628cd 90 SMART SM00530 16 71 2.2E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS07560 ec8af20cb21c85ed03da04bc598b4c02 232 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 50 225 1.2E-59 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NHAM_RS07560 ec8af20cb21c85ed03da04bc598b4c02 232 Gene3D G3DSA:3.30.70.260 142 209 3.2E-21 T 22-04-2016 NHAM_RS07560 ec8af20cb21c85ed03da04bc598b4c02 232 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 229 33.553 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NHAM_RS07560 ec8af20cb21c85ed03da04bc598b4c02 232 Gene3D G3DSA:3.40.50.1360 5 141 1.7E-60 T 22-04-2016 NHAM_RS07560 ec8af20cb21c85ed03da04bc598b4c02 232 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 226 7.1E-77 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NHAM_RS07560 ec8af20cb21c85ed03da04bc598b4c02 232 SUPERFAMILY SSF75445 128 212 2.35E-19 T 22-04-2016 NHAM_RS07560 ec8af20cb21c85ed03da04bc598b4c02 232 SUPERFAMILY SSF100950 1 145 8.38E-46 T 22-04-2016 NHAM_RS07560 ec8af20cb21c85ed03da04bc598b4c02 232 PANTHER PTHR11934 1 232 6.3E-99 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NHAM_RS17635 9a2089a7e65ab2eeb0d9f6a8731c3d43 176 Pfam PF13358 DDE superfamily endonuclease 7 148 1.5E-35 T 22-04-2016 NHAM_RS17635 9a2089a7e65ab2eeb0d9f6a8731c3d43 176 PANTHER PTHR23022 1 168 1.3E-17 T 22-04-2016 NHAM_RS20555 9a2089a7e65ab2eeb0d9f6a8731c3d43 176 Pfam PF13358 DDE superfamily endonuclease 7 148 1.5E-35 T 22-04-2016 NHAM_RS20555 9a2089a7e65ab2eeb0d9f6a8731c3d43 176 PANTHER PTHR23022 1 168 1.3E-17 T 22-04-2016 NHAM_RS19145 06991653843cba3a319535a2a39b3c1f 188 PANTHER PTHR23004:SF7 14 188 9.4E-67 T 22-04-2016 NHAM_RS19145 06991653843cba3a319535a2a39b3c1f 188 SUPERFAMILY SSF48452 11 184 5.69E-63 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS19145 06991653843cba3a319535a2a39b3c1f 188 Pfam PF06041 Bacterial protein of unknown function (DUF924) 16 185 1.1E-54 T 22-04-2016 IPR010323 Protein of unknown function DUF924 NHAM_RS19145 06991653843cba3a319535a2a39b3c1f 188 PANTHER PTHR23004 14 188 9.4E-67 T 22-04-2016 NHAM_RS19145 06991653843cba3a319535a2a39b3c1f 188 Gene3D G3DSA:1.25.40.10 89 187 4.9E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS19145 06991653843cba3a319535a2a39b3c1f 188 Gene3D G3DSA:1.20.58.320 10 87 2.8E-32 T 22-04-2016 NHAM_RS06805 9ed2da77e80f4d86e07fbccca1fb9102 619 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 1.9E-7 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 NHAM_RS06805 9ed2da77e80f4d86e07fbccca1fb9102 619 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 1.9E-7 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 NHAM_RS06805 9ed2da77e80f4d86e07fbccca1fb9102 619 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 1.9E-7 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 NHAM_RS06805 9ed2da77e80f4d86e07fbccca1fb9102 619 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 351 3.7E-77 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 NHAM_RS06805 9ed2da77e80f4d86e07fbccca1fb9102 619 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 557 616 6.3E-11 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NHAM_RS06805 9ed2da77e80f4d86e07fbccca1fb9102 619 PANTHER PTHR30033 1 619 7.2E-98 T 22-04-2016 NHAM_RS06805 9ed2da77e80f4d86e07fbccca1fb9102 619 Pfam PF00460 Flagella basal body rod protein 7 36 4.1E-9 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 NHAM_RS06805 9ed2da77e80f4d86e07fbccca1fb9102 619 PANTHER PTHR30033:SF1 1 619 7.2E-98 T 22-04-2016 NHAM_RS06805 9ed2da77e80f4d86e07fbccca1fb9102 619 SUPERFAMILY SSF64518 99 247 2.22E-11 T 22-04-2016 NHAM_RS06805 9ed2da77e80f4d86e07fbccca1fb9102 619 SUPERFAMILY SSF64518 318 616 2.22E-11 T 22-04-2016 NHAM_RS00145 051c110d19eaffd81856800a177f1dc2 221 Pfam PF04296 Protein of unknown function (DUF448) 23 93 4.9E-19 T 22-04-2016 IPR007393 Domain of unknown function DUF448 NHAM_RS00145 051c110d19eaffd81856800a177f1dc2 221 SUPERFAMILY SSF64376 20 107 6.8E-23 T 22-04-2016 IPR007393 Domain of unknown function DUF448 NHAM_RS00145 051c110d19eaffd81856800a177f1dc2 221 SUPERFAMILY SSF55315 105 196 1.98E-7 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like NHAM_RS00145 051c110d19eaffd81856800a177f1dc2 221 Gene3D G3DSA:3.30.1230.10 18 107 1.4E-24 T 22-04-2016 IPR007393 Domain of unknown function DUF448 NHAM_RS00145 051c110d19eaffd81856800a177f1dc2 221 PANTHER PTHR34215 3 217 4.5E-34 T 22-04-2016 NHAM_RS00145 051c110d19eaffd81856800a177f1dc2 221 PANTHER PTHR34215:SF1 3 217 4.5E-34 T 22-04-2016 NHAM_RS10670 4a6c8adf0aab6599227f16b01eb0aa29 229 Gene3D G3DSA:3.30.420.40 7 128 1.3E-15 T 22-04-2016 NHAM_RS10670 4a6c8adf0aab6599227f16b01eb0aa29 229 SUPERFAMILY SSF53067 13 204 3.01E-20 T 22-04-2016 NHAM_RS10670 4a6c8adf0aab6599227f16b01eb0aa29 229 Gene3D G3DSA:3.30.420.40 129 210 2.7E-13 T 22-04-2016 NHAM_RS10670 4a6c8adf0aab6599227f16b01eb0aa29 229 Pfam PF00480 ROK family 14 138 3.3E-5 T 22-04-2016 IPR000600 ROK family NHAM_RS04780 2cdb869cb4ee3668d311828a304aab85 283 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 46 283 2.0E-88 T 22-04-2016 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UniPathway: UPA00930 NHAM_RS04780 2cdb869cb4ee3668d311828a304aab85 283 Gene3D G3DSA:1.20.1260.10 31 283 5.4E-99 T 22-04-2016 IPR012347 Ferritin-related NHAM_RS04780 2cdb869cb4ee3668d311828a304aab85 283 Pfam PF05138 Phenylacetic acid catabolic protein 30 283 3.3E-99 T 22-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 NHAM_RS04780 2cdb869cb4ee3668d311828a304aab85 283 PANTHER PTHR30458:SF1 31 283 2.3E-101 T 22-04-2016 NHAM_RS04780 2cdb869cb4ee3668d311828a304aab85 283 SUPERFAMILY SSF47240 35 277 4.6E-86 T 22-04-2016 IPR009078 Ferritin-like superfamily NHAM_RS04780 2cdb869cb4ee3668d311828a304aab85 283 PIRSF PIRSF037834 27 283 6.9E-110 T 22-04-2016 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UniPathway: UPA00930 NHAM_RS04780 2cdb869cb4ee3668d311828a304aab85 283 PANTHER PTHR30458 31 283 2.3E-101 T 22-04-2016 NHAM_RS15765 bc303c168527e757b83afb4c9387e5e9 125 Gene3D G3DSA:3.40.50.1390 12 80 3.7E-7 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS15765 bc303c168527e757b83afb4c9387e5e9 125 SUPERFAMILY SSF53041 12 100 3.27E-10 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS15765 bc303c168527e757b83afb4c9387e5e9 125 SMART SM00857 12 122 0.0019 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS15765 bc303c168527e757b83afb4c9387e5e9 125 Pfam PF00239 Resolvase, N terminal domain 12 87 1.8E-7 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS05835 593302952145e27d9009b467294b712e 119 PANTHER PTHR26402 2 118 1.2E-31 T 22-04-2016 NHAM_RS05835 593302952145e27d9009b467294b712e 119 Pfam PF00072 Response regulator receiver domain 4 113 2.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS05835 593302952145e27d9009b467294b712e 119 Gene3D G3DSA:3.40.50.2300 1 118 1.8E-32 T 22-04-2016 NHAM_RS05835 593302952145e27d9009b467294b712e 119 PANTHER PTHR26402:SF481 2 118 1.2E-31 T 22-04-2016 NHAM_RS05835 593302952145e27d9009b467294b712e 119 SUPERFAMILY SSF52172 1 118 1.35E-29 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS05835 593302952145e27d9009b467294b712e 119 SMART SM00448 2 113 7.4E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS04465 ce198b460ddcefc3402cf8acf997f224 360 Pfam PF01594 Domain of unknown function DUF20 22 346 1.5E-35 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like NHAM_RS04465 ce198b460ddcefc3402cf8acf997f224 360 PANTHER PTHR21716:SF20 9 359 1.9E-125 T 22-04-2016 NHAM_RS04465 ce198b460ddcefc3402cf8acf997f224 360 PANTHER PTHR21716 9 359 1.9E-125 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like NHAM_RS13775 7b87f59c76073f7dbdfc8fbc17d28598 787 PANTHER PTHR33406 15 115 1.2E-129 T 22-04-2016 NHAM_RS13775 7b87f59c76073f7dbdfc8fbc17d28598 787 PANTHER PTHR33406 133 763 1.2E-129 T 22-04-2016 NHAM_RS13775 7b87f59c76073f7dbdfc8fbc17d28598 787 Gene3D G3DSA:1.20.1640.10 570 773 1.1E-25 T 22-04-2016 NHAM_RS13775 7b87f59c76073f7dbdfc8fbc17d28598 787 Gene3D G3DSA:1.20.1640.10 199 396 1.9E-19 T 22-04-2016 NHAM_RS13775 7b87f59c76073f7dbdfc8fbc17d28598 787 PANTHER PTHR33406:SF2 15 115 1.2E-129 T 22-04-2016 NHAM_RS13775 7b87f59c76073f7dbdfc8fbc17d28598 787 PANTHER PTHR33406:SF2 133 763 1.2E-129 T 22-04-2016 NHAM_RS13775 7b87f59c76073f7dbdfc8fbc17d28598 787 Pfam PF03176 MMPL family 67 398 1.1E-15 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 NHAM_RS13775 7b87f59c76073f7dbdfc8fbc17d28598 787 Pfam PF03176 MMPL family 457 760 1.1E-16 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 NHAM_RS13775 7b87f59c76073f7dbdfc8fbc17d28598 787 SUPERFAMILY SSF82866 197 390 3.01E-22 T 22-04-2016 NHAM_RS13775 7b87f59c76073f7dbdfc8fbc17d28598 787 SUPERFAMILY SSF82866 556 771 6.15E-26 T 22-04-2016 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 SUPERFAMILY SSF56524 82 326 2.75E-64 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 SUPERFAMILY SSF81296 294 414 1.68E-28 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 Pfam PF00174 Oxidoreductase molybdopterin binding domain 109 270 8.6E-47 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 Gene3D G3DSA:3.90.420.10 89 295 3.1E-61 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 293 396 7.7E-12 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 PANTHER PTHR19372 96 423 1.2E-73 T 22-04-2016 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 Gene3D G3DSA:2.60.40.650 296 414 1.1E-23 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 PRINTS PR00407 Eukaryotic molybdopterin domain signature 375 387 3.7E-18 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 PRINTS PR00407 Eukaryotic molybdopterin domain signature 220 236 3.7E-18 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 PRINTS PR00407 Eukaryotic molybdopterin domain signature 318 332 3.7E-18 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 PRINTS PR00407 Eukaryotic molybdopterin domain signature 237 250 3.7E-18 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 PRINTS PR00407 Eukaryotic molybdopterin domain signature 97 113 3.7E-18 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 PRINTS PR00407 Eukaryotic molybdopterin domain signature 253 266 3.7E-18 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS05575 eabe66f49c03163ff1d64201379b59ec 425 TIGRFAM TIGR04555 sulfite_DH_soxC: sulfite dehydrogenase 10 423 1.7E-165 T 22-04-2016 IPR030835 Sulfite dehydrogenase SoxC NHAM_RS14815 4bd8d21bdbf5658a9a94c9e6be339e1e 70 PANTHER PTHR39324:SF1 1 70 1.3E-18 T 22-04-2016 NHAM_RS14815 4bd8d21bdbf5658a9a94c9e6be339e1e 70 Gene3D G3DSA:3.30.1660.10 3 70 1.2E-26 T 22-04-2016 IPR025543 Dodecin-like NHAM_RS14815 4bd8d21bdbf5658a9a94c9e6be339e1e 70 Pfam PF07311 Dodecin 5 69 1.5E-24 T 22-04-2016 IPR009923 Dodecin NHAM_RS14815 4bd8d21bdbf5658a9a94c9e6be339e1e 70 PANTHER PTHR39324 1 70 1.3E-18 T 22-04-2016 NHAM_RS14815 4bd8d21bdbf5658a9a94c9e6be339e1e 70 SUPERFAMILY SSF89807 5 69 8.89E-21 T 22-04-2016 IPR009923 Dodecin NHAM_RS10930 90b259b54bda54a076de327f99a602d6 68 PRINTS PR00050 Cold shock protein signature 4 19 2.1E-7 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10930 90b259b54bda54a076de327f99a602d6 68 PRINTS PR00050 Cold shock protein signature 39 57 2.1E-7 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10930 90b259b54bda54a076de327f99a602d6 68 PRINTS PR00050 Cold shock protein signature 25 34 2.1E-7 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10930 90b259b54bda54a076de327f99a602d6 68 PIRSF PIRSF002599 1 68 2.0E-14 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 NHAM_RS10930 90b259b54bda54a076de327f99a602d6 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.1E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS10930 90b259b54bda54a076de327f99a602d6 68 SMART SM00357 3 67 4.3E-11 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS10930 90b259b54bda54a076de327f99a602d6 68 SUPERFAMILY SSF50249 1 67 4.71E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS10930 90b259b54bda54a076de327f99a602d6 68 Gene3D G3DSA:2.40.50.140 1 67 4.4E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS12340 780ac8405ff37036aa846830798d7cac 110 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 16 105 28.073 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS NHAM_RS12340 780ac8405ff37036aa846830798d7cac 110 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 27 105 5.3E-33 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 NHAM_RS12340 780ac8405ff37036aa846830798d7cac 110 SUPERFAMILY SSF54736 25 109 3.03E-32 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NHAM_RS12340 780ac8405ff37036aa846830798d7cac 110 PANTHER PTHR33473 13 109 2.1E-39 T 22-04-2016 NHAM_RS12340 780ac8405ff37036aa846830798d7cac 110 Gene3D G3DSA:3.30.1390.10 11 109 1.0E-44 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NHAM_RS14795 c1491bb6444b0b9df848b3405b17fb88 226 SUPERFAMILY SSF52540 2 207 7.59E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14795 c1491bb6444b0b9df848b3405b17fb88 226 PANTHER PTHR13696:SF66 1 216 9.4E-74 T 22-04-2016 NHAM_RS14795 c1491bb6444b0b9df848b3405b17fb88 226 PIRSF PIRSF009320 1 216 5.4E-42 T 22-04-2016 NHAM_RS14795 c1491bb6444b0b9df848b3405b17fb88 226 Gene3D G3DSA:3.40.50.300 2 210 2.0E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14795 c1491bb6444b0b9df848b3405b17fb88 226 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 137 3.0E-23 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NHAM_RS14795 c1491bb6444b0b9df848b3405b17fb88 226 PANTHER PTHR13696 1 216 9.4E-74 T 22-04-2016 NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 PANTHER PTHR30154:SF17 7 165 8.8E-94 T 22-04-2016 NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 Pfam PF13404 AsnC-type helix-turn-helix domain 15 56 5.9E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 ProSitePatterns PS00519 AsnC-type HTH domain signature. 33 59 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 Gene3D G3DSA:1.10.10.10 16 67 3.3E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 Pfam PF01037 Lrp/AsnC ligand binding domain 79 153 7.4E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 Gene3D G3DSA:3.30.70.920 68 151 7.5E-30 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 SMART SM00344 15 124 5.1E-43 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 SUPERFAMILY SSF46785 14 74 4.56E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 SUPERFAMILY SSF54909 75 163 6.7E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 PANTHER PTHR30154 7 165 8.8E-94 T 22-04-2016 NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 42 61 4.5E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 15 31 4.5E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NHAM_RS02380 3b476eb05da03e1b21edf90ecf63e246 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 42 4.5E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NHAM_RS19635 050a18ff1966fb843f41130c1381f923 402 Gene3D G3DSA:3.40.50.300 337 393 8.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19635 050a18ff1966fb843f41130c1381f923 402 Gene3D G3DSA:3.40.50.300 11 138 2.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19635 050a18ff1966fb843f41130c1381f923 402 SUPERFAMILY SSF52540 6 395 1.97E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19635 050a18ff1966fb843f41130c1381f923 402 Pfam PF13538 UvrD-like helicase C-terminal domain 340 389 1.5E-14 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain NHAM_RS07365 12b41b1be1d1edbd6642236a396e8391 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 3.6E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS07365 12b41b1be1d1edbd6642236a396e8391 230 Gene3D G3DSA:3.40.50.2300 1 120 1.1E-32 T 22-04-2016 NHAM_RS07365 12b41b1be1d1edbd6642236a396e8391 230 PANTHER PTHR26402:SF578 1 225 6.8E-97 T 22-04-2016 NHAM_RS07365 12b41b1be1d1edbd6642236a396e8391 230 SUPERFAMILY SSF52172 1 180 7.21E-32 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS07365 12b41b1be1d1edbd6642236a396e8391 230 Pfam PF00072 Response regulator receiver domain 4 112 7.8E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS07365 12b41b1be1d1edbd6642236a396e8391 230 PANTHER PTHR26402 1 225 6.8E-97 T 22-04-2016 NHAM_RS07365 12b41b1be1d1edbd6642236a396e8391 230 SMART SM00448 1 112 3.3E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS07365 12b41b1be1d1edbd6642236a396e8391 230 SMART SM00862 146 221 3.2E-29 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS07365 12b41b1be1d1edbd6642236a396e8391 230 Gene3D G3DSA:1.10.10.10 122 222 1.2E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS18420 28db84845ddc3536225af8ce8dd7e9c4 216 Pfam PF00484 Carbonic anhydrase 39 196 1.4E-47 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS18420 28db84845ddc3536225af8ce8dd7e9c4 216 PANTHER PTHR11002:SF13 6 216 1.1E-60 T 22-04-2016 NHAM_RS18420 28db84845ddc3536225af8ce8dd7e9c4 216 Gene3D G3DSA:3.40.1050.10 4 210 1.9E-63 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS18420 28db84845ddc3536225af8ce8dd7e9c4 216 SUPERFAMILY SSF53056 4 210 1.7E-59 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS18420 28db84845ddc3536225af8ce8dd7e9c4 216 SMART SM00947 32 201 9.4E-65 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS18420 28db84845ddc3536225af8ce8dd7e9c4 216 PANTHER PTHR11002 6 216 1.1E-60 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS15215 8a77b25a9c190332155db747a6c567da 151 Gene3D G3DSA:1.10.10.10 7 85 1.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS15215 8a77b25a9c190332155db747a6c567da 151 SUPERFAMILY SSF46785 7 134 1.29E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS15215 8a77b25a9c190332155db747a6c567da 151 Pfam PF01475 Ferric uptake regulator family 16 133 3.6E-37 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 NHAM_RS15215 8a77b25a9c190332155db747a6c567da 151 PANTHER PTHR33202 5 134 5.4E-34 T 22-04-2016 NHAM_RS16400 49141591591937905fbb96d34c7e43e9 336 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 37 131 1.7E-15 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 NHAM_RS16400 49141591591937905fbb96d34c7e43e9 336 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 12 131 5.4E-14 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 NHAM_RS20395 cc711d74c26179ccf2d83456f4821a70 125 SUPERFAMILY SSF50346 5 118 2.35E-29 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS20395 cc711d74c26179ccf2d83456f4821a70 125 Pfam PF05239 PRC-barrel domain 16 74 2.9E-12 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS20395 cc711d74c26179ccf2d83456f4821a70 125 PANTHER PTHR36505 1 124 7.4E-51 T 22-04-2016 NHAM_RS20395 cc711d74c26179ccf2d83456f4821a70 125 Gene3D G3DSA:2.30.30.240 15 72 2.3E-13 T 22-04-2016 NHAM_RS20395 cc711d74c26179ccf2d83456f4821a70 125 PANTHER PTHR36505:SF1 1 124 7.4E-51 T 22-04-2016 NHAM_RS18255 0c1b523078a2e12a3351d4a496b5ad2a 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 276 2.1E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS18255 0c1b523078a2e12a3351d4a496b5ad2a 289 PANTHER PTHR30406:SF1 15 287 3.0E-151 T 22-04-2016 NHAM_RS18255 0c1b523078a2e12a3351d4a496b5ad2a 289 Gene3D G3DSA:1.10.3720.10 26 282 2.6E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS18255 0c1b523078a2e12a3351d4a496b5ad2a 289 SUPERFAMILY SSF161098 20 272 3.79E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS18255 0c1b523078a2e12a3351d4a496b5ad2a 289 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 25 277 2.3E-94 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 NHAM_RS18255 0c1b523078a2e12a3351d4a496b5ad2a 289 PANTHER PTHR30406 15 287 3.0E-151 T 22-04-2016 NHAM_RS18255 0c1b523078a2e12a3351d4a496b5ad2a 289 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 22 279 1.6E-116 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 NHAM_RS15265 3825232aa7c3cc2c0caf087e98c8c37f 462 Gene3D G3DSA:2.60.40.1610 77 203 3.4E-15 T 22-04-2016 IPR010679 Domain of unknown function DUF1254 NHAM_RS15265 3825232aa7c3cc2c0caf087e98c8c37f 462 Gene3D G3DSA:2.60.120.600 288 462 5.2E-54 T 22-04-2016 IPR010621 Domain of unknown function DUF1214 NHAM_RS15265 3825232aa7c3cc2c0caf087e98c8c37f 462 PANTHER PTHR36509:SF2 15 461 5.3E-73 T 22-04-2016 NHAM_RS15265 3825232aa7c3cc2c0caf087e98c8c37f 462 SUPERFAMILY SSF160935 13 461 2.62E-110 T 22-04-2016 NHAM_RS15265 3825232aa7c3cc2c0caf087e98c8c37f 462 Pfam PF06863 Protein of unknown function (DUF1254) 68 198 5.6E-32 T 22-04-2016 IPR010679 Domain of unknown function DUF1254 NHAM_RS15265 3825232aa7c3cc2c0caf087e98c8c37f 462 Pfam PF06742 Protein of unknown function (DUF1214) 337 445 7.7E-32 T 22-04-2016 IPR010621 Domain of unknown function DUF1214 NHAM_RS15265 3825232aa7c3cc2c0caf087e98c8c37f 462 PANTHER PTHR36509 15 461 5.3E-73 T 22-04-2016 NHAM_RS01200 d56793cab5cdba39b11da198f8c1a6ea 307 Pfam PF01435 Peptidase family M48 66 277 6.6E-43 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NHAM_RS01200 d56793cab5cdba39b11da198f8c1a6ea 307 PANTHER PTHR10120 1 295 4.3E-113 T 22-04-2016 NHAM_RS01200 d56793cab5cdba39b11da198f8c1a6ea 307 PANTHER PTHR10120:SF19 1 295 4.3E-113 T 22-04-2016 NHAM_RS01200 d56793cab5cdba39b11da198f8c1a6ea 307 Gene3D G3DSA:3.30.2010.10 56 146 5.9E-34 T 22-04-2016 NHAM_RS01200 d56793cab5cdba39b11da198f8c1a6ea 307 Hamap MF_00188 Protease HtpX [htpX]. 3 277 28.357 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 NHAM_RS08830 3b6591fccd032b31452e05c70c17be71 267 PANTHER PTHR30349 27 267 1.8E-36 T 22-04-2016 NHAM_RS08830 3b6591fccd032b31452e05c70c17be71 267 Gene3D G3DSA:1.10.443.10 75 253 5.2E-32 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS08830 3b6591fccd032b31452e05c70c17be71 267 Pfam PF00589 Phage integrase family 88 242 1.3E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS08830 3b6591fccd032b31452e05c70c17be71 267 PANTHER PTHR30349:SF20 27 267 1.8E-36 T 22-04-2016 NHAM_RS08830 3b6591fccd032b31452e05c70c17be71 267 SUPERFAMILY SSF56349 34 246 2.94E-34 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS06615 017865d423debe79244ac0fd0a18ba2f 197 Pfam PF13580 SIS domain 32 147 2.1E-27 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 NHAM_RS06615 017865d423debe79244ac0fd0a18ba2f 197 PANTHER PTHR30390:SF6 2 190 1.0E-74 T 22-04-2016 NHAM_RS06615 017865d423debe79244ac0fd0a18ba2f 197 PANTHER PTHR30390 2 190 1.0E-74 T 22-04-2016 NHAM_RS06615 017865d423debe79244ac0fd0a18ba2f 197 Gene3D G3DSA:3.40.50.10490 4 190 7.9E-58 T 22-04-2016 NHAM_RS06615 017865d423debe79244ac0fd0a18ba2f 197 SUPERFAMILY SSF53697 4 189 7.89E-50 T 22-04-2016 NHAM_RS06615 017865d423debe79244ac0fd0a18ba2f 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 35.403 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 NHAM_RS03630 6626c38445d84ea98d6869896a8837ed 315 Pfam PF13444 Acetyltransferase (GNAT) domain 74 186 1.2E-31 T 22-04-2016 NHAM_RS03630 6626c38445d84ea98d6869896a8837ed 315 Gene3D G3DSA:3.40.630.30 60 205 1.1E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS03630 6626c38445d84ea98d6869896a8837ed 315 SUPERFAMILY SSF55729 58 282 7.66E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS03630 6626c38445d84ea98d6869896a8837ed 315 PANTHER PTHR37323:SF1 57 306 1.6E-34 T 22-04-2016 NHAM_RS03630 6626c38445d84ea98d6869896a8837ed 315 PANTHER PTHR37323 57 306 1.6E-34 T 22-04-2016 NHAM_RS15585 40028d5322e7869431186691fec0a69b 473 Pfam PF13440 Polysaccharide biosynthesis protein 28 321 3.0E-55 T 22-04-2016 NHAM_RS15585 40028d5322e7869431186691fec0a69b 473 PANTHER PTHR30250 1 473 1.0E-20 T 22-04-2016 NHAM_RS07690 62fc9ca87a8cf3b33198c9bf66609d14 401 SUPERFAMILY SSF53901 13 264 2.64E-30 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS07690 62fc9ca87a8cf3b33198c9bf66609d14 401 Gene3D G3DSA:3.40.47.10 14 267 1.5E-24 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS07690 62fc9ca87a8cf3b33198c9bf66609d14 401 SUPERFAMILY SSF53901 229 366 6.62E-15 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS07690 62fc9ca87a8cf3b33198c9bf66609d14 401 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 15 256 9.5E-15 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal NHAM_RS18895 bd6419874e461b594bbbcbfe94b6d2d2 246 Gene3D G3DSA:3.40.50.2300 3 127 2.0E-36 T 22-04-2016 NHAM_RS18895 bd6419874e461b594bbbcbfe94b6d2d2 246 SMART SM00448 5 115 1.7E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS18895 bd6419874e461b594bbbcbfe94b6d2d2 246 Pfam PF00072 Response regulator receiver domain 7 116 1.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS18895 bd6419874e461b594bbbcbfe94b6d2d2 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 239 5.2E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS18895 bd6419874e461b594bbbcbfe94b6d2d2 246 Gene3D G3DSA:1.10.10.10 141 241 5.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS18895 bd6419874e461b594bbbcbfe94b6d2d2 246 SUPERFAMILY SSF46894 140 240 3.97E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS18895 bd6419874e461b594bbbcbfe94b6d2d2 246 SMART SM00862 163 239 1.3E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS18895 bd6419874e461b594bbbcbfe94b6d2d2 246 PANTHER PTHR26402 5 239 7.6E-142 T 22-04-2016 NHAM_RS18895 bd6419874e461b594bbbcbfe94b6d2d2 246 SUPERFAMILY SSF52172 2 127 1.71E-36 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS18895 bd6419874e461b594bbbcbfe94b6d2d2 246 PANTHER PTHR26402:SF497 5 239 7.6E-142 T 22-04-2016 NHAM_RS17775 4fb3cb664a010fddc10d4e3f7543c1b8 422 Gene3D G3DSA:3.40.50.300 56 84 2.0E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17775 4fb3cb664a010fddc10d4e3f7543c1b8 422 Gene3D G3DSA:3.40.50.300 272 331 2.0E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18280 1c61717418c0884bcb29279c40628cf8 268 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 221 1.0E-39 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 NHAM_RS18280 1c61717418c0884bcb29279c40628cf8 268 SUPERFAMILY SSF52402 2 204 7.07E-57 T 22-04-2016 NHAM_RS18280 1c61717418c0884bcb29279c40628cf8 268 PANTHER PTHR23293 173 268 1.1E-57 T 22-04-2016 NHAM_RS18280 1c61717418c0884bcb29279c40628cf8 268 PANTHER PTHR23293 1 153 1.1E-57 T 22-04-2016 NHAM_RS18280 1c61717418c0884bcb29279c40628cf8 268 Gene3D G3DSA:3.40.50.620 7 217 4.4E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS16235 f3f39a46df08cc8be945269054b52b20 465 SUPERFAMILY SSF63411 30 244 4.15E-44 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NHAM_RS16235 f3f39a46df08cc8be945269054b52b20 465 Gene3D G3DSA:3.30.830.10 259 438 2.3E-30 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NHAM_RS16235 f3f39a46df08cc8be945269054b52b20 465 PANTHER PTHR11851 26 438 3.6E-58 T 22-04-2016 NHAM_RS16235 f3f39a46df08cc8be945269054b52b20 465 Gene3D G3DSA:3.30.830.10 33 248 4.4E-47 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NHAM_RS16235 f3f39a46df08cc8be945269054b52b20 465 Pfam PF00675 Insulinase (Peptidase family M16) 55 191 2.0E-5 T 22-04-2016 IPR011765 Peptidase M16, N-terminal NHAM_RS16235 f3f39a46df08cc8be945269054b52b20 465 PANTHER PTHR11851:SF140 26 438 3.6E-58 T 22-04-2016 NHAM_RS16235 f3f39a46df08cc8be945269054b52b20 465 Pfam PF05193 Peptidase M16 inactive domain 198 373 7.5E-30 T 22-04-2016 IPR007863 Peptidase M16, C-terminal NHAM_RS16235 f3f39a46df08cc8be945269054b52b20 465 SUPERFAMILY SSF63411 257 446 6.54E-43 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NHAM_RS09000 4c2d047085df863ae3322c8bfb516fdd 279 Pfam PF02616 Segregation and condensation protein ScpA 42 258 1.0E-9 T 22-04-2016 IPR003768 Segregation and condensation protein A NHAM_RS09000 4c2d047085df863ae3322c8bfb516fdd 279 PANTHER PTHR33969 7 277 1.5E-62 T 22-04-2016 NHAM_RS09000 4c2d047085df863ae3322c8bfb516fdd 279 PANTHER PTHR33969:SF2 7 277 1.5E-62 T 22-04-2016 NHAM_RS18695 c24c91d142a77a94b3c07ab16550389c 300 Gene3D G3DSA:1.10.10.10 1 82 1.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS18695 c24c91d142a77a94b3c07ab16550389c 300 Pfam PF03466 LysR substrate binding domain 86 167 1.3E-13 T 22-04-2016 IPR005119 LysR, substrate-binding NHAM_RS18695 c24c91d142a77a94b3c07ab16550389c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS18695 c24c91d142a77a94b3c07ab16550389c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS18695 c24c91d142a77a94b3c07ab16550389c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS18695 c24c91d142a77a94b3c07ab16550389c 300 SUPERFAMILY SSF46785 1 109 5.89E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS18695 c24c91d142a77a94b3c07ab16550389c 300 PANTHER PTHR30126 1 264 1.9E-79 T 22-04-2016 NHAM_RS18695 c24c91d142a77a94b3c07ab16550389c 300 Gene3D G3DSA:3.40.190.10 88 168 2.3E-13 T 22-04-2016 NHAM_RS18695 c24c91d142a77a94b3c07ab16550389c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS18695 c24c91d142a77a94b3c07ab16550389c 300 SUPERFAMILY SSF53850 87 265 1.01E-19 T 22-04-2016 NHAM_RS18695 c24c91d142a77a94b3c07ab16550389c 300 PANTHER PTHR30126:SF21 1 264 1.9E-79 T 22-04-2016 NHAM_RS07160 4949f7e634f3ab5f252fe255aebd6844 192 Gene3D G3DSA:2.60.120.600 23 175 3.2E-28 T 22-04-2016 IPR010621 Domain of unknown function DUF1214 NHAM_RS07160 4949f7e634f3ab5f252fe255aebd6844 192 Pfam PF06742 Protein of unknown function (DUF1214) 72 170 7.5E-23 T 22-04-2016 IPR010621 Domain of unknown function DUF1214 NHAM_RS07160 4949f7e634f3ab5f252fe255aebd6844 192 PIRSF PIRSF009471 1 192 3.6E-73 T 22-04-2016 IPR012038 Uncharacterised conserved protein UCP009471 NHAM_RS07160 4949f7e634f3ab5f252fe255aebd6844 192 SUPERFAMILY SSF160935 17 167 8.63E-28 T 22-04-2016 NHAM_RS05190 047a861420d33c095aec57e26b7d8426 195 PANTHER PTHR23091 2 170 1.4E-16 T 22-04-2016 NHAM_RS05190 047a861420d33c095aec57e26b7d8426 195 SUPERFAMILY SSF55729 18 169 1.74E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS05190 047a861420d33c095aec57e26b7d8426 195 Pfam PF00583 Acetyltransferase (GNAT) family 91 164 8.0E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS05190 047a861420d33c095aec57e26b7d8426 195 Gene3D G3DSA:3.40.630.30 21 169 2.9E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS20585 670c70e79973c24b0f0b3e6b51b32b93 293 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 195 277 1.6E-9 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NHAM_RS20585 670c70e79973c24b0f0b3e6b51b32b93 293 PANTHER PTHR22602 3 282 2.7E-63 T 22-04-2016 NHAM_RS20585 670c70e79973c24b0f0b3e6b51b32b93 293 SUPERFAMILY SSF103025 5 211 1.38E-55 T 22-04-2016 NHAM_RS20585 670c70e79973c24b0f0b3e6b51b32b93 293 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 106 1.6E-6 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal NHAM_RS20585 670c70e79973c24b0f0b3e6b51b32b93 293 PANTHER PTHR22602:SF0 3 282 2.7E-63 T 22-04-2016 NHAM_RS20585 670c70e79973c24b0f0b3e6b51b32b93 293 Gene3D G3DSA:3.30.70.1400 9 97 4.3E-23 T 22-04-2016 NHAM_RS20585 670c70e79973c24b0f0b3e6b51b32b93 293 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 155 219 1.1E-26 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site NHAM_RS09205 525beab6eb7e5299654bfada79b30d81 340 Pfam PF02355 Protein export membrane protein 139 319 4.3E-64 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial NHAM_RS09205 525beab6eb7e5299654bfada79b30d81 340 SUPERFAMILY SSF82866 99 319 1.83E-39 T 22-04-2016 NHAM_RS09205 525beab6eb7e5299654bfada79b30d81 340 Gene3D G3DSA:1.20.1640.10 129 320 4.1E-26 T 22-04-2016 NHAM_RS09205 525beab6eb7e5299654bfada79b30d81 340 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 125 308 1.6E-52 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NHAM_RS09205 525beab6eb7e5299654bfada79b30d81 340 PANTHER PTHR30081 28 318 1.4E-74 T 22-04-2016 NHAM_RS09205 525beab6eb7e5299654bfada79b30d81 340 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 65 311 3.2E-78 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 NHAM_RS09205 525beab6eb7e5299654bfada79b30d81 340 PRINTS PR01755 Bacterial translocase SecF protein signature 178 192 3.3E-31 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NHAM_RS09205 525beab6eb7e5299654bfada79b30d81 340 PRINTS PR01755 Bacterial translocase SecF protein signature 226 244 3.3E-31 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NHAM_RS09205 525beab6eb7e5299654bfada79b30d81 340 PRINTS PR01755 Bacterial translocase SecF protein signature 64 79 3.3E-31 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NHAM_RS09205 525beab6eb7e5299654bfada79b30d81 340 PRINTS PR01755 Bacterial translocase SecF protein signature 258 273 3.3E-31 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NHAM_RS09205 525beab6eb7e5299654bfada79b30d81 340 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 37 322 28.536 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 NHAM_RS09205 525beab6eb7e5299654bfada79b30d81 340 Pfam PF07549 SecD/SecF GG Motif 60 83 2.1E-9 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site NHAM_RS03505 836a1362101ab9f4e02ea1a3c5477950 365 Pfam PF00155 Aminotransferase class I and II 29 354 6.3E-45 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NHAM_RS03505 836a1362101ab9f4e02ea1a3c5477950 365 Gene3D G3DSA:3.40.640.10 57 249 3.4E-53 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS03505 836a1362101ab9f4e02ea1a3c5477950 365 Gene3D G3DSA:3.90.1150.10 250 361 3.2E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS03505 836a1362101ab9f4e02ea1a3c5477950 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 362 53.447 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 NHAM_RS03505 836a1362101ab9f4e02ea1a3c5477950 365 SUPERFAMILY SSF53383 19 361 6.6E-77 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS03505 836a1362101ab9f4e02ea1a3c5477950 365 PANTHER PTHR11751 4 364 5.3E-100 T 22-04-2016 NHAM_RS03505 836a1362101ab9f4e02ea1a3c5477950 365 PANTHER PTHR11751:SF347 4 364 5.3E-100 T 22-04-2016 NHAM_RS04040 2485901d8119344a85dc36c82053e254 253 PANTHER PTHR11941 4 252 1.7E-84 T 22-04-2016 NHAM_RS04040 2485901d8119344a85dc36c82053e254 253 Gene3D G3DSA:3.90.226.10 4 252 1.8E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS04040 2485901d8119344a85dc36c82053e254 253 PANTHER PTHR11941:SF17 4 252 1.7E-84 T 22-04-2016 NHAM_RS04040 2485901d8119344a85dc36c82053e254 253 SUPERFAMILY SSF52096 2 252 9.0E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS04040 2485901d8119344a85dc36c82053e254 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 252 2.2E-46 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NHAM_RS04770 3c0f2fd961cdbe3eb88ea7c5b0bbad80 329 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 23 311 3.2E-157 T 22-04-2016 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149+1.14.13.14|KEGG: 00940+1.14.13.14|MetaCyc: PWY-5176|UniPathway: UPA00930 NHAM_RS04770 3c0f2fd961cdbe3eb88ea7c5b0bbad80 329 Pfam PF05138 Phenylacetic acid catabolic protein 33 307 4.6E-98 T 22-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 NHAM_RS04770 3c0f2fd961cdbe3eb88ea7c5b0bbad80 329 PANTHER PTHR30458:SF0 18 329 5.4E-157 T 22-04-2016 NHAM_RS04770 3c0f2fd961cdbe3eb88ea7c5b0bbad80 329 PANTHER PTHR30458 18 329 5.4E-157 T 22-04-2016 NHAM_RS04770 3c0f2fd961cdbe3eb88ea7c5b0bbad80 329 SUPERFAMILY SSF47240 43 284 2.03E-79 T 22-04-2016 IPR009078 Ferritin-like superfamily NHAM_RS04770 3c0f2fd961cdbe3eb88ea7c5b0bbad80 329 Gene3D G3DSA:1.20.1260.10 33 287 4.2E-98 T 22-04-2016 IPR012347 Ferritin-related NHAM_RS00535 9d82b53931bfb8d940373225ba0e4c51 682 PANTHER PTHR12145:SF11 12 679 2.3E-240 T 22-04-2016 NHAM_RS00535 9d82b53931bfb8d940373225ba0e4c51 682 SUPERFAMILY SSF48208 197 539 2.57E-73 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NHAM_RS00535 9d82b53931bfb8d940373225ba0e4c51 682 PANTHER PTHR12145 12 679 2.3E-240 T 22-04-2016 NHAM_RS00535 9d82b53931bfb8d940373225ba0e4c51 682 Pfam PF03190 Protein of unknown function, DUF255 13 173 2.0E-72 T 22-04-2016 IPR004879 Domain of unknown function DUF255 NHAM_RS00535 9d82b53931bfb8d940373225ba0e4c51 682 PIRSF PIRSF006402 3 682 8.6E-202 T 22-04-2016 IPR024705 Spermatogenesis-associated protein 20 NHAM_RS00535 9d82b53931bfb8d940373225ba0e4c51 682 Gene3D G3DSA:1.50.10.10 219 526 1.1E-15 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NHAM_RS00535 9d82b53931bfb8d940373225ba0e4c51 682 SUPERFAMILY SSF52833 11 139 6.8E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00535 9d82b53931bfb8d940373225ba0e4c51 682 Gene3D G3DSA:3.40.30.10 30 153 1.5E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS14590 77410d767db1ad27182e64bc2bb10a5d 100 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 19 78 2.0E-9 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family NHAM_RS09605 41bdbfdae65e6173043ee7d0194178f4 290 Gene3D G3DSA:2.40.10.10 105 202 6.2E-5 T 22-04-2016 NHAM_RS09605 41bdbfdae65e6173043ee7d0194178f4 290 PANTHER PTHR22939:SF77 42 288 5.2E-27 T 22-04-2016 NHAM_RS09605 41bdbfdae65e6173043ee7d0194178f4 290 PRINTS PR00834 HtrA/DegQ protease family signature 64 84 9.2E-7 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS09605 41bdbfdae65e6173043ee7d0194178f4 290 PRINTS PR00834 HtrA/DegQ protease family signature 233 245 9.2E-7 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NHAM_RS09605 41bdbfdae65e6173043ee7d0194178f4 290 Gene3D G3DSA:2.40.10.10 34 104 7.8E-5 T 22-04-2016 NHAM_RS09605 41bdbfdae65e6173043ee7d0194178f4 290 Pfam PF13365 Trypsin-like peptidase domain 36 168 4.3E-11 T 22-04-2016 NHAM_RS09605 41bdbfdae65e6173043ee7d0194178f4 290 SUPERFAMILY SSF50494 9 198 7.71E-21 T 22-04-2016 IPR009003 Peptidase S1, PA clan NHAM_RS09605 41bdbfdae65e6173043ee7d0194178f4 290 SMART SM00228 201 275 1.5E-5 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS09605 41bdbfdae65e6173043ee7d0194178f4 290 Gene3D G3DSA:2.30.42.10 203 288 8.8E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS09605 41bdbfdae65e6173043ee7d0194178f4 290 SUPERFAMILY SSF50156 188 284 1.97E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS09605 41bdbfdae65e6173043ee7d0194178f4 290 PANTHER PTHR22939 42 288 5.2E-27 T 22-04-2016 NHAM_RS09605 41bdbfdae65e6173043ee7d0194178f4 290 Pfam PF13180 PDZ domain 202 283 6.4E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 NHAM_RS16780 19e8472d3078768ffb2d0209d6da6f49 597 Pfam PF00723 Glycosyl hydrolases family 15 216 527 2.8E-49 T 22-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 NHAM_RS16780 19e8472d3078768ffb2d0209d6da6f49 597 PANTHER PTHR31616 2 594 1.8E-183 T 22-04-2016 NHAM_RS16780 19e8472d3078768ffb2d0209d6da6f49 597 PANTHER PTHR31616:SF0 2 594 1.8E-183 T 22-04-2016 NHAM_RS16780 19e8472d3078768ffb2d0209d6da6f49 597 SUPERFAMILY SSF48208 189 587 1.51E-109 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NHAM_RS16780 19e8472d3078768ffb2d0209d6da6f49 597 Gene3D G3DSA:1.50.10.10 212 593 1.6E-80 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NHAM_RS16260 1c32ff09b42ef6222f66d8475d8045b1 680 Pfam PF00849 RNA pseudouridylate synthase 414 546 2.4E-8 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS16260 1c32ff09b42ef6222f66d8475d8045b1 680 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 418 575 2.7E-39 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 NHAM_RS16260 1c32ff09b42ef6222f66d8475d8045b1 680 Gene3D G3DSA:3.10.290.10 352 414 6.0E-22 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS16260 1c32ff09b42ef6222f66d8475d8045b1 680 PANTHER PTHR21600:SF2 349 667 1.5E-72 T 22-04-2016 NHAM_RS16260 1c32ff09b42ef6222f66d8475d8045b1 680 PANTHER PTHR21600 349 667 1.5E-72 T 22-04-2016 NHAM_RS16260 1c32ff09b42ef6222f66d8475d8045b1 680 SUPERFAMILY SSF55174 301 454 1.83E-25 T 22-04-2016 NHAM_RS16260 1c32ff09b42ef6222f66d8475d8045b1 680 SMART SM00363 353 412 9.7E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS16260 1c32ff09b42ef6222f66d8475d8045b1 680 SUPERFAMILY SSF55120 411 572 2.56E-36 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS16260 1c32ff09b42ef6222f66d8475d8045b1 680 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 451 465 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 NHAM_RS16260 1c32ff09b42ef6222f66d8475d8045b1 680 Pfam PF01479 S4 domain 353 399 3.6E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS09155 a57727c68c4a74108786ac9176a31fb4 282 PANTHER PTHR30371 2 270 1.8E-95 T 22-04-2016 NHAM_RS09155 a57727c68c4a74108786ac9176a31fb4 282 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 108 134 5.9E-41 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NHAM_RS09155 a57727c68c4a74108786ac9176a31fb4 282 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 90 108 5.9E-41 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NHAM_RS09155 a57727c68c4a74108786ac9176a31fb4 282 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 165 193 5.9E-41 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NHAM_RS09155 a57727c68c4a74108786ac9176a31fb4 282 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 5.9E-41 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NHAM_RS09155 a57727c68c4a74108786ac9176a31fb4 282 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 251 18.364 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NHAM_RS09155 a57727c68c4a74108786ac9176a31fb4 282 ProSitePatterns PS01218 TatC family signature. 165 184 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site NHAM_RS09155 a57727c68c4a74108786ac9176a31fb4 282 Pfam PF00902 Sec-independent protein translocase protein (TatC) 15 232 1.7E-66 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NHAM_RS09155 a57727c68c4a74108786ac9176a31fb4 282 PANTHER PTHR30371:SF0 2 270 1.8E-95 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NHAM_RS09155 a57727c68c4a74108786ac9176a31fb4 282 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 237 6.3E-59 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NHAM_RS03560 668e49d6b4f6935cc6c95c289e7c8efa 369 Gene3D G3DSA:3.40.50.300 132 235 1.0E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03560 668e49d6b4f6935cc6c95c289e7c8efa 369 Gene3D G3DSA:3.40.50.300 309 368 1.0E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03560 668e49d6b4f6935cc6c95c289e7c8efa 369 Gene3D G3DSA:3.40.50.300 6 127 3.5E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03560 668e49d6b4f6935cc6c95c289e7c8efa 369 SUPERFAMILY SSF52540 4 368 5.35E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03560 668e49d6b4f6935cc6c95c289e7c8efa 369 Pfam PF13538 UvrD-like helicase C-terminal domain 320 368 2.3E-19 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain NHAM_RS03560 668e49d6b4f6935cc6c95c289e7c8efa 369 Pfam PF13604 AAA domain 34 194 2.1E-23 T 22-04-2016 NHAM_RS03560 668e49d6b4f6935cc6c95c289e7c8efa 369 PANTHER PTHR23274:SF1 2 369 6.1E-42 T 22-04-2016 NHAM_RS03560 668e49d6b4f6935cc6c95c289e7c8efa 369 PANTHER PTHR23274 2 369 6.1E-42 T 22-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 NHAM_RS04515 35ee7ba839b00444ad00e8966770d84b 135 SUPERFAMILY SSF52172 15 132 4.84E-26 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS04515 35ee7ba839b00444ad00e8966770d84b 135 SMART SM00448 16 127 8.1E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS04515 35ee7ba839b00444ad00e8966770d84b 135 Gene3D G3DSA:3.40.50.2300 17 132 8.0E-26 T 22-04-2016 NHAM_RS04515 35ee7ba839b00444ad00e8966770d84b 135 Pfam PF00072 Response regulator receiver domain 18 127 7.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS04515 35ee7ba839b00444ad00e8966770d84b 135 PANTHER PTHR26402 16 130 5.8E-36 T 22-04-2016 NHAM_RS04515 35ee7ba839b00444ad00e8966770d84b 135 PANTHER PTHR26402:SF546 16 130 5.8E-36 T 22-04-2016 NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 SUPERFAMILY SSF51120 94 176 2.09E-18 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 SUPERFAMILY SSF51120 201 363 1.7E-6 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 148 166 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 PRINTS PR00313 NodO calcium binding signature 152 160 4.3E-12 T 22-04-2016 NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 PRINTS PR00313 NodO calcium binding signature 290 299 4.3E-12 T 22-04-2016 NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 PRINTS PR00313 NodO calcium binding signature 251 259 4.3E-12 T 22-04-2016 NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 PRINTS PR00313 NodO calcium binding signature 140 151 4.3E-12 T 22-04-2016 NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 118 132 0.0016 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 303 316 0.41 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 134 150 0.035 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 245 258 0.12 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 285 297 1.8 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 151 168 0.0013 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 264 275 1.7 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 Gene3D G3DSA:2.150.10.10 197 355 9.1E-4 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal NHAM_RS05345 52b2f834ab92dd2fe8a3495330949ce0 370 Gene3D G3DSA:2.150.10.10 94 192 8.9E-18 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal NHAM_RS11020 7f04154740f081de3785ded8ea76cb8f 241 Hamap MF_00013 Octanoyltransferase [lipB]. 17 232 35.551 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NHAM_RS11020 7f04154740f081de3785ded8ea76cb8f 241 PANTHER PTHR10993:SF10 19 230 6.2E-81 T 22-04-2016 NHAM_RS11020 7f04154740f081de3785ded8ea76cb8f 241 Gene3D G3DSA:3.90.1550.10 24 230 2.7E-69 T 22-04-2016 NHAM_RS11020 7f04154740f081de3785ded8ea76cb8f 241 PIRSF PIRSF016262 19 237 2.2E-54 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NHAM_RS11020 7f04154740f081de3785ded8ea76cb8f 241 PANTHER PTHR10993 19 230 6.2E-81 T 22-04-2016 NHAM_RS11020 7f04154740f081de3785ded8ea76cb8f 241 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 52 229 1.3E-46 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NHAM_RS11020 7f04154740f081de3785ded8ea76cb8f 241 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 87 102 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 NHAM_RS11020 7f04154740f081de3785ded8ea76cb8f 241 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 91 144 4.0E-24 T 22-04-2016 NHAM_RS11020 7f04154740f081de3785ded8ea76cb8f 241 Pfam PF03099 Biotin/lipoate A/B protein ligase family 83 183 1.1E-7 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 NHAM_RS11020 7f04154740f081de3785ded8ea76cb8f 241 SUPERFAMILY SSF55681 28 231 1.91E-65 T 22-04-2016 NHAM_RS03725 acad371689eae6c8c6f45e0ff011df61 314 SUPERFAMILY SSF52540 8 232 2.66E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03725 acad371689eae6c8c6f45e0ff011df61 314 SMART SM00382 37 216 3.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS03725 acad371689eae6c8c6f45e0ff011df61 314 PANTHER PTHR24220:SF0 14 235 5.0E-98 T 22-04-2016 NHAM_RS03725 acad371689eae6c8c6f45e0ff011df61 314 Gene3D G3DSA:3.40.50.300 4 232 1.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03725 acad371689eae6c8c6f45e0ff011df61 314 Pfam PF00005 ABC transporter 29 170 2.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS03725 acad371689eae6c8c6f45e0ff011df61 314 PANTHER PTHR24220 14 235 5.0E-98 T 22-04-2016 NHAM_RS03725 acad371689eae6c8c6f45e0ff011df61 314 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS08915 d3afdb6f3f69fb90bc814761209a45f1 224 SUPERFAMILY SSF53474 22 150 8.96E-11 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS08915 d3afdb6f3f69fb90bc814761209a45f1 224 Gene3D G3DSA:3.40.50.1820 183 221 1.4E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS08915 d3afdb6f3f69fb90bc814761209a45f1 224 Gene3D G3DSA:3.40.50.1820 42 140 1.4E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS00485 d14f837a543466691e96eb7cd4091903 234 Gene3D G3DSA:1.20.1050.10 102 226 2.4E-42 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS00485 d14f837a543466691e96eb7cd4091903 234 Pfam PF00043 Glutathione S-transferase, C-terminal domain 143 222 2.2E-10 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal NHAM_RS00485 d14f837a543466691e96eb7cd4091903 234 SUPERFAMILY SSF47616 102 230 2.46E-34 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS00485 d14f837a543466691e96eb7cd4091903 234 SUPERFAMILY SSF52833 11 103 7.33E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00485 d14f837a543466691e96eb7cd4091903 234 Pfam PF02798 Glutathione S-transferase, N-terminal domain 21 99 3.5E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NHAM_RS00485 d14f837a543466691e96eb7cd4091903 234 PANTHER PTHR11260:SF178 21 231 2.6E-68 T 22-04-2016 NHAM_RS00485 d14f837a543466691e96eb7cd4091903 234 Gene3D G3DSA:3.40.30.10 11 101 7.6E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00485 d14f837a543466691e96eb7cd4091903 234 PANTHER PTHR11260 21 231 2.6E-68 T 22-04-2016 NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 921 934 2.3E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 896 914 2.3E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 870 2.3E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 389 5.6E-26 T 22-04-2016 NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 SUPERFAMILY SSF55874 771 938 1.31E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 PANTHER PTHR24423 704 918 6.8E-21 T 22-04-2016 NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 PANTHER PTHR24423 211 217 6.8E-21 T 22-04-2016 NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 Gene3D G3DSA:3.30.565.10 248 419 1.1E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 Gene3D G3DSA:3.30.565.10 776 939 3.9E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 PANTHER PTHR24423:SF445 704 918 6.8E-21 T 22-04-2016 NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 PANTHER PTHR24423:SF445 211 217 6.8E-21 T 22-04-2016 NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 823 936 1.9E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 SMART SM00387 816 937 1.7E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS19395 886e9197b0520ed19b7ee4c4e50c654e 946 SUPERFAMILY SSF55874 254 433 1.57E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09375 e820776013bc79f335de9b209c63eab9 155 PANTHER PTHR12901 1 151 5.6E-46 T 22-04-2016 NHAM_RS09375 e820776013bc79f335de9b209c63eab9 155 SUPERFAMILY SSF55961 1 150 1.63E-37 T 22-04-2016 NHAM_RS09375 e820776013bc79f335de9b209c63eab9 155 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 141 4.1E-28 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain NHAM_RS09375 e820776013bc79f335de9b209c63eab9 155 Gene3D G3DSA:3.30.530.20 1 149 1.3E-48 T 22-04-2016 IPR023393 START-like domain NHAM_RS05130 c66bcaba01cdd43a2edad7ad282e0972 119 PANTHER PTHR34703 8 100 8.2E-16 T 22-04-2016 NHAM_RS05130 c66bcaba01cdd43a2edad7ad282e0972 119 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 17 105 3.9E-22 T 22-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 NHAM_RS05130 c66bcaba01cdd43a2edad7ad282e0972 119 Pfam PF03334 Na+/H+ antiporter subunit 18 98 1.1E-19 T 22-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 NHAM_RS05130 c66bcaba01cdd43a2edad7ad282e0972 119 PANTHER PTHR34703:SF1 8 100 8.2E-16 T 22-04-2016 NHAM_RS16905 0417268001a8d2f516a0b59f7d331233 201 SUPERFAMILY SSF50814 9 191 9.48E-19 T 22-04-2016 IPR011038 Calycin-like NHAM_RS16905 0417268001a8d2f516a0b59f7d331233 201 Pfam PF08768 Domain of unknown function (DUF1794) 11 190 3.0E-18 T 22-04-2016 IPR014878 Domain of unknown function DUF1794 NHAM_RS06485 14311dd6681728dfc1f5a5ebc108b0d7 332 Gene3D G3DSA:1.10.150.170 114 215 3.5E-34 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS06485 14311dd6681728dfc1f5a5ebc108b0d7 332 Gene3D G3DSA:3.40.50.150 216 309 2.1E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS06485 14311dd6681728dfc1f5a5ebc108b0d7 332 Gene3D G3DSA:3.40.50.150 8 111 2.1E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS06485 14311dd6681728dfc1f5a5ebc108b0d7 332 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 308 37.148 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS06485 14311dd6681728dfc1f5a5ebc108b0d7 332 PIRSF PIRSF004486 2 309 4.5E-101 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS06485 14311dd6681728dfc1f5a5ebc108b0d7 332 PANTHER PTHR11265 6 310 1.3E-140 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS06485 14311dd6681728dfc1f5a5ebc108b0d7 332 SUPERFAMILY SSF53335 213 307 1.98E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS06485 14311dd6681728dfc1f5a5ebc108b0d7 332 SUPERFAMILY SSF53335 8 114 1.98E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS06485 14311dd6681728dfc1f5a5ebc108b0d7 332 SUPERFAMILY SSF81799 115 213 1.83E-33 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS06485 14311dd6681728dfc1f5a5ebc108b0d7 332 PANTHER PTHR11265:SF0 6 310 1.3E-140 T 22-04-2016 NHAM_RS06485 14311dd6681728dfc1f5a5ebc108b0d7 332 Pfam PF01795 MraW methylase family 6 307 8.0E-98 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS06485 14311dd6681728dfc1f5a5ebc108b0d7 332 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 7 307 1.6E-92 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS09765 daf882cd5e1a71c09bdcae9986aa33d7 313 Pfam PF05235 CHAD domain 43 261 6.9E-40 T 22-04-2016 IPR007899 CHAD domain NHAM_RS09765 daf882cd5e1a71c09bdcae9986aa33d7 313 PANTHER PTHR39339:SF1 19 308 7.0E-22 T 22-04-2016 NHAM_RS09765 daf882cd5e1a71c09bdcae9986aa33d7 313 SMART SM00880 42 299 1.0E-60 T 22-04-2016 IPR007899 CHAD domain NHAM_RS09765 daf882cd5e1a71c09bdcae9986aa33d7 313 PANTHER PTHR39339 19 308 7.0E-22 T 22-04-2016 NHAM_RS24110 1736d7705005b2c15f7f3919b72d5751 568 Gene3D G3DSA:2.60.120.260 268 460 1.4E-9 T 22-04-2016 IPR008979 Galactose-binding domain-like NHAM_RS24110 1736d7705005b2c15f7f3919b72d5751 568 SUPERFAMILY SSF49785 268 460 2.04E-17 T 22-04-2016 IPR008979 Galactose-binding domain-like NHAM_RS14960 658dcbe3c8e80bb242b90768a21efb40 286 SUPERFAMILY SSF52821 161 285 3.01E-34 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS14960 658dcbe3c8e80bb242b90768a21efb40 286 Gene3D G3DSA:3.40.250.10 155 285 7.4E-38 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS14960 658dcbe3c8e80bb242b90768a21efb40 286 SMART SM00450 10 134 2.1E-23 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS14960 658dcbe3c8e80bb242b90768a21efb40 286 SMART SM00450 157 279 2.4E-18 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS14960 658dcbe3c8e80bb242b90768a21efb40 286 Gene3D G3DSA:3.40.250.10 4 152 1.5E-49 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS14960 658dcbe3c8e80bb242b90768a21efb40 286 SUPERFAMILY SSF52821 3 154 9.3E-46 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS14960 658dcbe3c8e80bb242b90768a21efb40 286 ProSitePatterns PS00380 Rhodanese signature 1. 44 55 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 NHAM_RS14960 658dcbe3c8e80bb242b90768a21efb40 286 Pfam PF00581 Rhodanese-like domain 11 130 8.9E-17 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS14960 658dcbe3c8e80bb242b90768a21efb40 286 Pfam PF00581 Rhodanese-like domain 160 274 5.8E-12 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS14960 658dcbe3c8e80bb242b90768a21efb40 286 PANTHER PTHR11364 5 285 6.2E-119 T 22-04-2016 NHAM_RS18260 952cd0886d1702f1d6aa5ba34f9b2deb 261 SUPERFAMILY SSF161098 3 252 1.44E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS18260 952cd0886d1702f1d6aa5ba34f9b2deb 261 PANTHER PTHR30406 1 261 1.6E-151 T 22-04-2016 NHAM_RS18260 952cd0886d1702f1d6aa5ba34f9b2deb 261 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 2 251 3.4E-91 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 NHAM_RS18260 952cd0886d1702f1d6aa5ba34f9b2deb 261 Gene3D G3DSA:1.10.3720.10 4 253 5.5E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS18260 952cd0886d1702f1d6aa5ba34f9b2deb 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 257 4.7E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS18260 952cd0886d1702f1d6aa5ba34f9b2deb 261 PANTHER PTHR30406:SF6 1 261 1.6E-151 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 NHAM_RS18260 952cd0886d1702f1d6aa5ba34f9b2deb 261 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 1 255 5.2E-115 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 NHAM_RS02835 324b815214989462762794d3b183bf79 394 PANTHER PTHR12169 1 379 2.0E-164 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 NHAM_RS02835 324b815214989462762794d3b183bf79 394 Pfam PF03969 AFG1-like ATPase 8 375 3.5E-121 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 NHAM_RS02835 324b815214989462762794d3b183bf79 394 Gene3D G3DSA:3.40.50.300 59 208 4.3E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02835 324b815214989462762794d3b183bf79 394 SUPERFAMILY SSF52540 59 211 2.34E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02835 324b815214989462762794d3b183bf79 394 PANTHER PTHR12169:SF11 1 379 2.0E-164 T 22-04-2016 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 TIGRFAM TIGR00876 tal_mycobact: transaldolase 12 364 3.2E-96 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 Hamap MF_00493 Transaldolase [tal]. 1 377 129.386 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 Pfam PF00923 Transaldolase 14 365 1.1E-87 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 ProSitePatterns PS00958 Transaldolase active site. 137 154 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 ProSitePatterns PS01054 Transaldolase signature 1. 40 48 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 Pfam PF00342 Phosphoglucose isomerase 453 667 1.0E-13 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 SUPERFAMILY SSF53697 401 794 4.45E-89 T 22-04-2016 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 Gene3D G3DSA:3.40.50.10490 449 570 2.1E-26 T 22-04-2016 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 Gene3D G3DSA:3.20.20.70 1 367 6.7E-116 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 PANTHER PTHR10683 234 393 1.0E-112 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 PANTHER PTHR10683 1 216 1.0E-112 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 Gene3D G3DSA:3.40.50.10490 571 675 7.1E-30 T 22-04-2016 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 Gene3D G3DSA:3.40.50.10490 854 932 1.1E-9 T 22-04-2016 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 SUPERFAMILY SSF51569 1 370 3.91E-80 T 22-04-2016 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 PANTHER PTHR10683:SF12 234 393 1.0E-112 T 22-04-2016 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 PANTHER PTHR10683:SF12 1 216 1.0E-112 T 22-04-2016 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 Gene3D G3DSA:3.40.50.10490 694 774 6.2E-12 T 22-04-2016 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 PRINTS PR00662 Glucose-6-phosphate isomerase signature 645 666 1.0E-8 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 PRINTS PR00662 Glucose-6-phosphate isomerase signature 458 477 1.0E-8 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NHAM_RS16750 609a2d3dc12f7dd1e9e16c1fea14a044 950 PRINTS PR00662 Glucose-6-phosphate isomerase signature 570 588 1.0E-8 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 NHAM_RS08555 202fcbe42e69d06e0ed31784fd017b20 287 PANTHER PTHR11795:SF379 1 286 4.1E-150 T 22-04-2016 NHAM_RS08555 202fcbe42e69d06e0ed31784fd017b20 287 PANTHER PTHR11795 1 286 4.1E-150 T 22-04-2016 NHAM_RS08555 202fcbe42e69d06e0ed31784fd017b20 287 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 275 9.6E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NHAM_RS00460 3d82885080bfcdfd164f51d577fb705e 271 SUPERFAMILY SSF56219 3 270 2.75E-67 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NHAM_RS00460 3d82885080bfcdfd164f51d577fb705e 271 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 5 269 8.8E-51 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 NHAM_RS00460 3d82885080bfcdfd164f51d577fb705e 271 PANTHER PTHR22748:SF7 1 271 4.3E-91 T 22-04-2016 NHAM_RS00460 3d82885080bfcdfd164f51d577fb705e 271 Gene3D G3DSA:3.60.10.10 3 269 1.8E-65 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NHAM_RS00460 3d82885080bfcdfd164f51d577fb705e 271 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 262 9.7E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase NHAM_RS00460 3d82885080bfcdfd164f51d577fb705e 271 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 NHAM_RS00460 3d82885080bfcdfd164f51d577fb705e 271 PANTHER PTHR22748 1 271 4.3E-91 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 NHAM_RS07175 ddf0ebd4cedfb5cf0cdcf4a68796def0 519 Gene3D G3DSA:1.20.1250.20 307 508 1.2E-10 T 22-04-2016 NHAM_RS07175 ddf0ebd4cedfb5cf0cdcf4a68796def0 519 Pfam PF07690 Major Facilitator Superfamily 59 449 1.6E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS07175 ddf0ebd4cedfb5cf0cdcf4a68796def0 519 Gene3D G3DSA:1.20.1250.20 57 225 4.6E-33 T 22-04-2016 NHAM_RS07175 ddf0ebd4cedfb5cf0cdcf4a68796def0 519 SUPERFAMILY SSF103473 290 509 9.16E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS07175 ddf0ebd4cedfb5cf0cdcf4a68796def0 519 SUPERFAMILY SSF103473 43 237 9.16E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS07175 ddf0ebd4cedfb5cf0cdcf4a68796def0 519 PANTHER PTHR23501:SF73 2 514 1.5E-152 T 22-04-2016 NHAM_RS07175 ddf0ebd4cedfb5cf0cdcf4a68796def0 519 PANTHER PTHR23501 2 514 1.5E-152 T 22-04-2016 NHAM_RS13400 74dc40873a273c3b7c935582c6dd3bcd 377 SUPERFAMILY SSF56935 237 354 8.11E-5 T 22-04-2016 NHAM_RS13400 74dc40873a273c3b7c935582c6dd3bcd 377 Gene3D G3DSA:2.40.160.10 8 148 2.7E-6 T 22-04-2016 IPR023614 Porin domain NHAM_RS13400 74dc40873a273c3b7c935582c6dd3bcd 377 Gene3D G3DSA:2.40.160.10 204 351 2.7E-6 T 22-04-2016 IPR023614 Porin domain NHAM_RS13400 74dc40873a273c3b7c935582c6dd3bcd 377 Pfam PF10082 Putative beta-barrel porin 2 183 342 6.2E-10 T 22-04-2016 IPR018759 Putative beta-barrel porin 2 NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 Pfam PF00773 RNB domain 260 589 2.9E-89 T 22-04-2016 NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 PANTHER PTHR23355 122 722 1.3E-165 T 22-04-2016 NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 SMART SM00955 260 591 1.1E-151 T 22-04-2016 NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 SUPERFAMILY SSF50249 638 719 3.19E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 SUPERFAMILY SSF50249 230 638 1.31E-127 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 SMART SM00316 638 721 7.4E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 ProSitePatterns PS01175 Ribonuclease II family signature. 558 582 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 TIGRFAM TIGR02063 RNase_R: ribonuclease R 10 721 5.4E-211 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 Gene3D G3DSA:2.40.50.140 640 709 9.3E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 Pfam PF00575 S1 RNA binding domain 638 691 1.8E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 122 708 4.9E-142 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 Hamap MF_01895 Ribonuclease R [rnr]. 29 721 53.231 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 NHAM_RS12445 e1d974aacc1d9540f82b2b605b5c3c22 783 PANTHER PTHR23355:SF9 122 722 1.3E-165 T 22-04-2016 NHAM_RS01155 98e808e32317579e2163083674b575d3 278 Pfam PF01863 Protein of unknown function DUF45 66 266 2.1E-53 T 22-04-2016 IPR002725 Protein of unknown function DUF45 NHAM_RS01155 98e808e32317579e2163083674b575d3 278 PANTHER PTHR30399:SF3 44 277 7.9E-108 T 22-04-2016 NHAM_RS01155 98e808e32317579e2163083674b575d3 278 PANTHER PTHR30399 44 277 7.9E-108 T 22-04-2016 NHAM_RS15400 7f912d2b38aa2b5549ad740ddba81b5b 118 Pfam PF01610 Transposase 4 113 8.9E-9 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain NHAM_RS15675 3d93e0addabf97d965766accf9ca097a 388 Pfam PF02563 Polysaccharide biosynthesis/export protein 55 144 1.1E-13 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 NHAM_RS15675 3d93e0addabf97d965766accf9ca097a 388 PANTHER PTHR33619 54 78 2.8E-33 T 22-04-2016 NHAM_RS15675 3d93e0addabf97d965766accf9ca097a 388 PANTHER PTHR33619 96 354 2.8E-33 T 22-04-2016 NHAM_RS15675 3d93e0addabf97d965766accf9ca097a 388 Gene3D G3DSA:3.30.1950.10 63 138 3.1E-17 T 22-04-2016 NHAM_RS15675 3d93e0addabf97d965766accf9ca097a 388 Gene3D G3DSA:3.10.560.10 221 331 2.0E-24 T 22-04-2016 NHAM_RS15675 3d93e0addabf97d965766accf9ca097a 388 Gene3D G3DSA:3.10.560.10 139 220 4.7E-17 T 22-04-2016 NHAM_RS15675 3d93e0addabf97d965766accf9ca097a 388 Pfam PF10531 SLBB domain 152 197 0.0014 T 22-04-2016 IPR019554 Soluble ligand binding domain NHAM_RS19255 110c0ee72053cda91293f06aa5afc861 321 SUPERFAMILY SSF46785 8 109 4.93E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS19255 110c0ee72053cda91293f06aa5afc861 321 PANTHER PTHR30126:SF5 8 313 3.1E-128 T 22-04-2016 NHAM_RS19255 110c0ee72053cda91293f06aa5afc861 321 Gene3D G3DSA:1.10.10.10 9 89 9.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS19255 110c0ee72053cda91293f06aa5afc861 321 PANTHER PTHR30126 8 313 3.1E-128 T 22-04-2016 NHAM_RS19255 110c0ee72053cda91293f06aa5afc861 321 SUPERFAMILY SSF53850 97 303 1.59E-44 T 22-04-2016 NHAM_RS19255 110c0ee72053cda91293f06aa5afc861 321 Gene3D G3DSA:3.40.190.10 183 269 1.2E-24 T 22-04-2016 NHAM_RS19255 110c0ee72053cda91293f06aa5afc861 321 Gene3D G3DSA:3.40.190.10 98 182 5.3E-17 T 22-04-2016 NHAM_RS19255 110c0ee72053cda91293f06aa5afc861 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS19255 110c0ee72053cda91293f06aa5afc861 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS19255 110c0ee72053cda91293f06aa5afc861 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS19255 110c0ee72053cda91293f06aa5afc861 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.3E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS19255 110c0ee72053cda91293f06aa5afc861 321 Pfam PF03466 LysR substrate binding domain 96 297 1.9E-51 T 22-04-2016 IPR005119 LysR, substrate-binding NHAM_RS06210 220f4b46abe9ce940da169a66206a666 41 Pfam PF00444 Ribosomal protein L36 1 41 3.7E-15 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS06210 220f4b46abe9ce940da169a66206a666 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 3.3E-6 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS06210 220f4b46abe9ce940da169a66206a666 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS06210 220f4b46abe9ce940da169a66206a666 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.38 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS06210 220f4b46abe9ce940da169a66206a666 41 PANTHER PTHR18804 1 41 4.9E-15 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS06210 220f4b46abe9ce940da169a66206a666 41 SUPERFAMILY SSF57840 1 41 7.85E-12 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS06210 220f4b46abe9ce940da169a66206a666 41 PANTHER PTHR18804:SF11 1 41 4.9E-15 T 22-04-2016 NHAM_RS13730 42527aad5de52e49316f7e4f1be10bd4 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 9 287 1.4E-97 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 NHAM_RS13730 42527aad5de52e49316f7e4f1be10bd4 314 PANTHER PTHR30426 7 313 1.5E-149 T 22-04-2016 NHAM_RS13730 42527aad5de52e49316f7e4f1be10bd4 314 Pfam PF02401 LytB protein 9 285 3.2E-89 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 NHAM_RS13730 42527aad5de52e49316f7e4f1be10bd4 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 7 289 38.001 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 NHAM_RS12420 1f26b8feb9c74f8bb0813808e6d29c6c 121 PANTHER PTHR36511 42 115 1.4E-37 T 22-04-2016 NHAM_RS12420 1f26b8feb9c74f8bb0813808e6d29c6c 121 PANTHER PTHR36511 5 24 1.4E-37 T 22-04-2016 NHAM_RS12420 1f26b8feb9c74f8bb0813808e6d29c6c 121 SMART SM00530 57 115 2.0E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS12420 1f26b8feb9c74f8bb0813808e6d29c6c 121 Gene3D G3DSA:1.10.260.40 57 115 1.5E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS12420 1f26b8feb9c74f8bb0813808e6d29c6c 121 PANTHER PTHR36511:SF2 42 115 1.4E-37 T 22-04-2016 NHAM_RS12420 1f26b8feb9c74f8bb0813808e6d29c6c 121 PANTHER PTHR36511:SF2 5 24 1.4E-37 T 22-04-2016 NHAM_RS12420 1f26b8feb9c74f8bb0813808e6d29c6c 121 Pfam PF13560 Helix-turn-helix domain 57 114 1.1E-9 T 22-04-2016 NHAM_RS12420 1f26b8feb9c74f8bb0813808e6d29c6c 121 SUPERFAMILY SSF47413 58 109 1.18E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS09995 4f24b7fb0ba90a47eb438afdc28db96d 102 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 7 93 9.8E-18 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 NHAM_RS09995 4f24b7fb0ba90a47eb438afdc28db96d 102 SUPERFAMILY SSF50475 4 100 3.04E-25 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NHAM_RS09995 4f24b7fb0ba90a47eb438afdc28db96d 102 Gene3D G3DSA:2.30.110.10 7 100 1.1E-23 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 NHAM_RS09995 4f24b7fb0ba90a47eb438afdc28db96d 102 PANTHER PTHR35176:SF3 1 102 4.3E-27 T 22-04-2016 NHAM_RS09995 4f24b7fb0ba90a47eb438afdc28db96d 102 PANTHER PTHR35176 1 102 4.3E-27 T 22-04-2016 NHAM_RS17945 c25f372cec595d23881c1430cacaa1d3 184 SUPERFAMILY SSF158442 18 164 6.54E-32 T 22-04-2016 NHAM_RS17945 c25f372cec595d23881c1430cacaa1d3 184 Gene3D G3DSA:1.20.1550.10 16 167 2.8E-15 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain NHAM_RS17945 c25f372cec595d23881c1430cacaa1d3 184 PIRSF PIRSF033913 3 170 9.6E-38 T 22-04-2016 IPR024199 Uncharacterised conserved protein, DsbB-like NHAM_RS17945 c25f372cec595d23881c1430cacaa1d3 184 Pfam PF02600 Disulfide bond formation protein DsbB 16 164 2.8E-31 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 NHAM_RS02675 76d815627801e4fe56fa396e70d9c6a3 90 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 84 8.0E-26 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02675 76d815627801e4fe56fa396e70d9c6a3 90 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02675 76d815627801e4fe56fa396e70d9c6a3 90 Gene3D G3DSA:2.40.50.100 20 83 5.9E-31 T 22-04-2016 NHAM_RS02675 76d815627801e4fe56fa396e70d9c6a3 90 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 2.3E-34 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02675 76d815627801e4fe56fa396e70d9c6a3 90 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.3E-33 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02675 76d815627801e4fe56fa396e70d9c6a3 90 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.3E-33 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02675 76d815627801e4fe56fa396e70d9c6a3 90 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.3E-33 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02675 76d815627801e4fe56fa396e70d9c6a3 90 PANTHER PTHR15893 1 84 6.8E-49 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02675 76d815627801e4fe56fa396e70d9c6a3 90 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.132 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02675 76d815627801e4fe56fa396e70d9c6a3 90 Pfam PF01016 Ribosomal L27 protein 2 81 3.1E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02675 76d815627801e4fe56fa396e70d9c6a3 90 SUPERFAMILY SSF110324 2 83 2.3E-34 T 22-04-2016 NHAM_RS14230 a5da43d5615fc35a557971b17c7dd820 263 Gene3D G3DSA:3.40.50.300 11 253 1.3E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14230 a5da43d5615fc35a557971b17c7dd820 263 SUPERFAMILY SSF52540 56 253 2.61E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS14230 a5da43d5615fc35a557971b17c7dd820 263 PANTHER PTHR24220:SF476 45 263 4.5E-84 T 22-04-2016 NHAM_RS14230 a5da43d5615fc35a557971b17c7dd820 263 PANTHER PTHR24220 45 263 4.5E-84 T 22-04-2016 NHAM_RS14230 a5da43d5615fc35a557971b17c7dd820 263 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS14230 a5da43d5615fc35a557971b17c7dd820 263 Pfam PF00005 ABC transporter 59 190 2.5E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 PANTHER PTHR19375 2 233 5.3E-77 T 22-04-2016 NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 PANTHER PTHR19375 288 408 5.3E-77 T 22-04-2016 NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 SUPERFAMILY SSF53067 172 240 3.32E-28 T 22-04-2016 NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 SUPERFAMILY SSF53067 290 411 3.32E-28 T 22-04-2016 NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 Pfam PF00012 Hsp70 protein 298 388 1.7E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 Pfam PF00012 Hsp70 protein 91 223 5.1E-8 T 22-04-2016 IPR013126 Heat shock protein 70 family NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 Gene3D G3DSA:3.30.420.40 98 181 1.6E-26 T 22-04-2016 NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 Gene3D G3DSA:3.30.420.40 3 66 1.6E-26 T 22-04-2016 NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 Gene3D G3DSA:3.30.420.40 350 390 1.2E-13 T 22-04-2016 NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 Gene3D G3DSA:3.30.420.40 182 218 1.2E-13 T 22-04-2016 NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 PANTHER PTHR19375:SF182 2 233 5.3E-77 T 22-04-2016 NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 PANTHER PTHR19375:SF182 288 408 5.3E-77 T 22-04-2016 NHAM_RS05290 7c0bcbc00d523acdf605fb5b32be5e85 418 SUPERFAMILY SSF53067 3 168 7.45E-30 T 22-04-2016 NHAM_RS01185 549d5fdc683815e7b5fd9c2aaffef113 138 Pfam PF06823 Protein of unknown function (DUF1236) 74 138 3.7E-23 T 22-04-2016 IPR009642 Protein of unknown function DUF1236 NHAM_RS13815 c32790e1d6d526481a62d9f1eba3cafe 360 PANTHER PTHR30574 1 341 2.4E-52 T 22-04-2016 NHAM_RS13815 c32790e1d6d526481a62d9f1eba3cafe 360 Pfam PF04143 Sulphur transport 26 337 3.8E-58 T 22-04-2016 IPR007272 Sulphur transport domain NHAM_RS13815 c32790e1d6d526481a62d9f1eba3cafe 360 PANTHER PTHR30574:SF1 1 341 2.4E-52 T 22-04-2016 NHAM_RS19745 09953aaebe73c45a16e8fd245163d2e6 781 Gene3D G3DSA:2.60.120.40 187 320 3.1E-14 T 22-04-2016 IPR008983 Tumour necrosis factor-like domain GO:0005515 NHAM_RS19745 09953aaebe73c45a16e8fd245163d2e6 781 SUPERFAMILY SSF49842 187 320 1.57E-15 T 22-04-2016 IPR008983 Tumour necrosis factor-like domain GO:0005515 NHAM_RS19745 09953aaebe73c45a16e8fd245163d2e6 781 Pfam PF00386 C1q domain 190 272 2.5E-6 T 22-04-2016 IPR001073 C1q domain NHAM_RS19745 09953aaebe73c45a16e8fd245163d2e6 781 SMART SM00110 181 321 0.0042 T 22-04-2016 IPR001073 C1q domain NHAM_RS19745 09953aaebe73c45a16e8fd245163d2e6 781 Pfam PF13884 Chaperone of endosialidase 660 714 1.3E-14 T 22-04-2016 IPR030392 Intramolecular chaperone auto-processing domain NHAM_RS07040 86608314eae09a28db222f2f6014915b 366 ProSitePatterns PS01007 Transposases, Mutator family, signature. 234 258 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS07040 86608314eae09a28db222f2f6014915b 366 PANTHER PTHR33217 7 338 8.0E-141 T 22-04-2016 NHAM_RS07040 86608314eae09a28db222f2f6014915b 366 Pfam PF00872 Transposase, Mutator family 13 342 1.8E-111 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS04160 1a6678734ff18b07dc00fbbf1f714385 436 Gene3D G3DSA:3.90.1530.10 3 90 3.0E-15 T 22-04-2016 NHAM_RS04160 1a6678734ff18b07dc00fbbf1f714385 436 PIRSF PIRSF036758 2 421 3.1E-82 T 22-04-2016 IPR015840 DNA methyase, ParB domain-containing NHAM_RS04160 1a6678734ff18b07dc00fbbf1f714385 436 Gene3D G3DSA:3.40.50.150 157 417 7.0E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS04160 1a6678734ff18b07dc00fbbf1f714385 436 SUPERFAMILY SSF110849 5 114 1.92E-21 T 22-04-2016 IPR003115 ParB/Sulfiredoxin NHAM_RS04160 1a6678734ff18b07dc00fbbf1f714385 436 SUPERFAMILY SSF53335 159 415 3.63E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS04160 1a6678734ff18b07dc00fbbf1f714385 436 SMART SM00470 5 91 4.3E-14 T 22-04-2016 IPR003115 ParB/Sulfiredoxin NHAM_RS04160 1a6678734ff18b07dc00fbbf1f714385 436 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 386 406 3.1E-15 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NHAM_RS04160 1a6678734ff18b07dc00fbbf1f714385 436 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 363 381 3.1E-15 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NHAM_RS04160 1a6678734ff18b07dc00fbbf1f714385 436 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 344 361 3.1E-15 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NHAM_RS04160 1a6678734ff18b07dc00fbbf1f714385 436 Pfam PF01555 DNA methylase 197 401 1.1E-29 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 NHAM_RS04160 1a6678734ff18b07dc00fbbf1f714385 436 PANTHER PTHR13370 312 404 4.0E-17 T 22-04-2016 NHAM_RS04160 1a6678734ff18b07dc00fbbf1f714385 436 Pfam PF02195 ParB-like nuclease domain 7 90 2.5E-10 T 22-04-2016 IPR003115 ParB/Sulfiredoxin NHAM_RS03450 45299053f5babe08548ca58d54e54192 180 PANTHER PTHR10815:SF7 1 172 2.4E-81 T 22-04-2016 NHAM_RS03450 45299053f5babe08548ca58d54e54192 180 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 88 168 3.2E-19 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NHAM_RS03450 45299053f5babe08548ca58d54e54192 180 Gene3D G3DSA:3.30.160.70 3 83 7.0E-10 T 22-04-2016 NHAM_RS03450 45299053f5babe08548ca58d54e54192 180 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 NHAM_RS03450 45299053f5babe08548ca58d54e54192 180 Gene3D G3DSA:1.10.10.10 88 173 1.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03450 45299053f5babe08548ca58d54e54192 180 SUPERFAMILY SSF53155 4 83 3.84E-13 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 NHAM_RS03450 45299053f5babe08548ca58d54e54192 180 SUPERFAMILY SSF46767 88 170 1.23E-22 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NHAM_RS03450 45299053f5babe08548ca58d54e54192 180 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 89 169 6.0E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 NHAM_RS03450 45299053f5babe08548ca58d54e54192 180 PANTHER PTHR10815 1 172 2.4E-81 T 22-04-2016 NHAM_RS11390 b680e62888982c16334494bfbdced135 395 PANTHER PTHR21716:SF7 10 120 8.4E-90 T 22-04-2016 NHAM_RS11390 b680e62888982c16334494bfbdced135 395 PANTHER PTHR21716:SF7 140 380 8.4E-90 T 22-04-2016 NHAM_RS11390 b680e62888982c16334494bfbdced135 395 Pfam PF01594 Domain of unknown function DUF20 25 382 4.3E-41 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like NHAM_RS11390 b680e62888982c16334494bfbdced135 395 PANTHER PTHR21716 10 120 8.4E-90 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like NHAM_RS11390 b680e62888982c16334494bfbdced135 395 PANTHER PTHR21716 140 380 8.4E-90 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like NHAM_RS16575 eb11e78074d297af9d28df7cb245008d 252 Gene3D G3DSA:3.40.50.300 6 183 1.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16575 eb11e78074d297af9d28df7cb245008d 252 SUPERFAMILY SSF52540 4 178 2.26E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS12925 d63533b25f0dbad0c4ff2cd3f07debeb 375 Gene3D G3DSA:1.10.150.130 107 195 1.0E-7 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS12925 d63533b25f0dbad0c4ff2cd3f07debeb 375 Pfam PF00589 Phage integrase family 225 339 4.8E-6 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS12925 d63533b25f0dbad0c4ff2cd3f07debeb 375 Gene3D G3DSA:1.10.443.10 208 353 6.7E-13 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS12925 d63533b25f0dbad0c4ff2cd3f07debeb 375 SUPERFAMILY SSF56349 97 354 8.41E-32 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS08405 c332a94360c5c72d4a492816c9542c76 185 PIRSF PIRSF031878 1 185 1.9E-53 T 22-04-2016 IPR009922 Protein of unknown function DUF1457 NHAM_RS08405 c332a94360c5c72d4a492816c9542c76 185 Pfam PF07310 PAS domain 1 136 3.0E-45 T 22-04-2016 IPR009922 Protein of unknown function DUF1457 NHAM_RS07055 585ec2c4c4a78fbcd5b16c96c62f176a 373 Pfam PF13144 Chaperone for flagella basal body P-ring formation 132 330 4.3E-44 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal NHAM_RS07055 585ec2c4c4a78fbcd5b16c96c62f176a 373 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 197 330 1.2E-32 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal NHAM_RS07055 585ec2c4c4a78fbcd5b16c96c62f176a 373 SMART SM00858 208 269 4.9E-8 T 22-04-2016 IPR013974 SAF domain NHAM_RS07055 585ec2c4c4a78fbcd5b16c96c62f176a 373 PANTHER PTHR36307 7 350 1.8E-36 T 22-04-2016 NHAM_RS20255 fd501980d3f183ad282e2dafe29d0963 112 PANTHER PTHR30007 25 110 3.9E-21 T 22-04-2016 NHAM_RS20255 fd501980d3f183ad282e2dafe29d0963 112 SUPERFAMILY SSF53098 7 111 2.88E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS20255 fd501980d3f183ad282e2dafe29d0963 112 PANTHER PTHR30007:SF22 25 110 3.9E-21 T 22-04-2016 NHAM_RS20255 fd501980d3f183ad282e2dafe29d0963 112 Pfam PF13586 Transposase DDE domain 28 109 6.7E-18 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS11280 3114873f4d17a6340c7907121d40114d 321 Gene3D G3DSA:3.40.50.150 90 260 6.4E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS11280 3114873f4d17a6340c7907121d40114d 321 Pfam PF05050 Methyltransferase FkbM domain 110 246 7.4E-15 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NHAM_RS11280 3114873f4d17a6340c7907121d40114d 321 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 107 239 1.6E-21 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NHAM_RS11280 3114873f4d17a6340c7907121d40114d 321 SUPERFAMILY SSF53335 38 275 1.77E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS05435 d7e854a07c0393e8c9d2adac12220200 249 PANTHER PTHR18901:SF21 1 247 2.8E-70 T 22-04-2016 NHAM_RS05435 d7e854a07c0393e8c9d2adac12220200 249 Gene3D G3DSA:3.40.50.1000 22 241 3.2E-33 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS05435 d7e854a07c0393e8c9d2adac12220200 249 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 213 5.1E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NHAM_RS05435 d7e854a07c0393e8c9d2adac12220200 249 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 176 2.1E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NHAM_RS05435 d7e854a07c0393e8c9d2adac12220200 249 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 21 32 2.1E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NHAM_RS05435 d7e854a07c0393e8c9d2adac12220200 249 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 178 198 2.1E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NHAM_RS05435 d7e854a07c0393e8c9d2adac12220200 249 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 126 139 2.1E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NHAM_RS05435 d7e854a07c0393e8c9d2adac12220200 249 PANTHER PTHR18901 1 247 2.8E-70 T 22-04-2016 NHAM_RS05435 d7e854a07c0393e8c9d2adac12220200 249 SUPERFAMILY SSF56784 22 242 3.08E-42 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS05435 d7e854a07c0393e8c9d2adac12220200 249 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 214 1.1E-21 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS17130 191e01af2beeef7c6485cfffa09ebf15 182 Pfam PF07471 Phage DNA packaging protein Nu1 10 152 9.9E-8 T 22-04-2016 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit NHAM_RS14190 f417ad2ccc12e11ac1a97c39c20501fe 408 SUPERFAMILY SSF53335 56 252 2.54E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS14190 f417ad2ccc12e11ac1a97c39c20501fe 408 Pfam PF08484 C-methyltransferase C-terminal domain 244 402 1.1E-62 T 22-04-2016 IPR013691 C-methyltransferase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 NHAM_RS14190 f417ad2ccc12e11ac1a97c39c20501fe 408 PANTHER PTHR10108:SF714 32 292 2.2E-59 T 22-04-2016 NHAM_RS14190 f417ad2ccc12e11ac1a97c39c20501fe 408 Pfam PF08421 Putative zinc binding domain 3 64 2.3E-19 T 22-04-2016 IPR013630 Methyltransferase putative zinc binding domain KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 NHAM_RS14190 f417ad2ccc12e11ac1a97c39c20501fe 408 Gene3D G3DSA:3.40.50.150 88 256 1.3E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS14190 f417ad2ccc12e11ac1a97c39c20501fe 408 PANTHER PTHR10108 32 292 2.2E-59 T 22-04-2016 NHAM_RS14190 f417ad2ccc12e11ac1a97c39c20501fe 408 Pfam PF13489 Methyltransferase domain 92 237 2.5E-12 T 22-04-2016 NHAM_RS20640 a6f3429cb55db4920ad075047aeea840 94 PANTHER PTHR40266:SF2 1 94 8.3E-35 T 22-04-2016 NHAM_RS20640 a6f3429cb55db4920ad075047aeea840 94 SUPERFAMILY SSF143011 22 94 1.77E-11 T 22-04-2016 NHAM_RS20640 a6f3429cb55db4920ad075047aeea840 94 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 5 94 8.7E-14 T 22-04-2016 IPR007711 Toxin HigB-1 NHAM_RS20640 a6f3429cb55db4920ad075047aeea840 94 PANTHER PTHR40266 1 94 8.3E-35 T 22-04-2016 NHAM_RS19760 4b6a177799e8cca1ee9be8a6f462f76c 119 SUPERFAMILY SSF50346 3 104 4.91E-21 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS19760 4b6a177799e8cca1ee9be8a6f462f76c 119 PANTHER PTHR36505:SF1 13 118 6.8E-18 T 22-04-2016 NHAM_RS19760 4b6a177799e8cca1ee9be8a6f462f76c 119 Pfam PF05239 PRC-barrel domain 14 72 2.1E-12 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS19760 4b6a177799e8cca1ee9be8a6f462f76c 119 PANTHER PTHR36505 13 118 6.8E-18 T 22-04-2016 NHAM_RS19760 4b6a177799e8cca1ee9be8a6f462f76c 119 Gene3D G3DSA:2.30.30.240 14 71 1.3E-13 T 22-04-2016 NHAM_RS04715 89ec3c96dff570a2322eeb4d1389f1ee 156 SUPERFAMILY SSF54593 9 120 3.09E-22 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS04715 89ec3c96dff570a2322eeb4d1389f1ee 156 Gene3D G3DSA:3.10.180.10 4 119 1.2E-14 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS04715 89ec3c96dff570a2322eeb4d1389f1ee 156 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 90 4.3E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NHAM_RS16350 d697fe868c14c6090d60c66f2943b7ee 348 PANTHER PTHR10859 3 327 1.1E-136 T 22-04-2016 NHAM_RS16350 d697fe868c14c6090d60c66f2943b7ee 348 Gene3D G3DSA:3.90.550.10 22 153 5.7E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS16350 d697fe868c14c6090d60c66f2943b7ee 348 Pfam PF00535 Glycosyl transferase family 2 23 153 1.7E-27 T 22-04-2016 IPR001173 Glycosyltransferase 2-like NHAM_RS16350 d697fe868c14c6090d60c66f2943b7ee 348 PANTHER PTHR10859:SF86 3 327 1.1E-136 T 22-04-2016 NHAM_RS16350 d697fe868c14c6090d60c66f2943b7ee 348 SUPERFAMILY SSF53448 22 229 2.03E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS14045 2bc804b3e1727c0743ff5a82da2f5ab3 253 Pfam PF01061 ABC-2 type transporter 6 216 2.4E-34 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 NHAM_RS14045 2bc804b3e1727c0743ff5a82da2f5ab3 253 PANTHER PTHR30413 1 253 7.4E-126 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NHAM_RS14045 2bc804b3e1727c0743ff5a82da2f5ab3 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 7.2E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NHAM_RS14045 2bc804b3e1727c0743ff5a82da2f5ab3 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 7.2E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NHAM_RS14045 2bc804b3e1727c0743ff5a82da2f5ab3 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 7.2E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NHAM_RS14045 2bc804b3e1727c0743ff5a82da2f5ab3 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 21 42 7.2E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NHAM_RS14045 2bc804b3e1727c0743ff5a82da2f5ab3 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 7.2E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NHAM_RS14045 2bc804b3e1727c0743ff5a82da2f5ab3 253 PANTHER PTHR30413:SF5 1 253 7.4E-126 T 22-04-2016 NHAM_RS14045 2bc804b3e1727c0743ff5a82da2f5ab3 253 PIRSF PIRSF006648 10 250 1.2E-30 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NHAM_RS14440 a9024d17c98b2c3942cded4ff6ff1b70 327 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 33 326 1.1E-94 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 NHAM_RS14440 a9024d17c98b2c3942cded4ff6ff1b70 327 PANTHER PTHR30573 1 327 1.0E-135 T 22-04-2016 NHAM_RS14440 a9024d17c98b2c3942cded4ff6ff1b70 327 PANTHER PTHR30573:SF0 1 327 1.0E-135 T 22-04-2016 NHAM_RS14440 a9024d17c98b2c3942cded4ff6ff1b70 327 Pfam PF02445 Quinolinate synthetase A protein 35 325 4.7E-112 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 NHAM_RS14440 a9024d17c98b2c3942cded4ff6ff1b70 327 Hamap MF_00568 Quinolinate synthase A [nadA]. 30 326 43.817 T 22-04-2016 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 NHAM_RS14440 a9024d17c98b2c3942cded4ff6ff1b70 327 SUPERFAMILY SSF142754 33 325 4.05E-109 T 22-04-2016 NHAM_RS10430 83dde6b03917f4134e99233693f9364e 110 PANTHER PTHR31350:SF6 1 106 5.9E-54 T 22-04-2016 NHAM_RS10430 83dde6b03917f4134e99233693f9364e 110 PANTHER PTHR31350 1 106 5.9E-54 T 22-04-2016 NHAM_RS10430 83dde6b03917f4134e99233693f9364e 110 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 7 105 3.8E-38 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 NHAM_RS10430 83dde6b03917f4134e99233693f9364e 110 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 8 96 1.1E-26 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 NHAM_RS10430 83dde6b03917f4134e99233693f9364e 110 SUPERFAMILY SSF141255 7 97 2.48E-33 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 NHAM_RS10430 83dde6b03917f4134e99233693f9364e 110 SMART SM00992 6 105 1.7E-56 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 NHAM_RS19390 b1f6cdaec7a6d0a05d93e28716ae8cbe 427 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 169 413 1.2E-73 T 22-04-2016 IPR019219 Protein of unknown function DUF2130 NHAM_RS18010 673cd39a0a8c18893e566f5a2e4f86c3 164 Gene3D G3DSA:3.30.1330.60 47 158 1.4E-33 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS18010 673cd39a0a8c18893e566f5a2e4f86c3 164 Pfam PF00691 OmpA family 59 154 5.5E-22 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS18010 673cd39a0a8c18893e566f5a2e4f86c3 164 PRINTS PR01021 OMPA domain signature 90 105 1.6E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NHAM_RS18010 673cd39a0a8c18893e566f5a2e4f86c3 164 PRINTS PR01021 OMPA domain signature 60 82 1.6E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NHAM_RS18010 673cd39a0a8c18893e566f5a2e4f86c3 164 PRINTS PR01021 OMPA domain signature 105 121 1.6E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NHAM_RS18010 673cd39a0a8c18893e566f5a2e4f86c3 164 PANTHER PTHR30128 37 162 5.8E-52 T 22-04-2016 NHAM_RS18010 673cd39a0a8c18893e566f5a2e4f86c3 164 ProSitePatterns PS01068 OmpA-like domain. 92 136 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 NHAM_RS18010 673cd39a0a8c18893e566f5a2e4f86c3 164 SUPERFAMILY SSF103088 48 160 2.49E-34 T 22-04-2016 IPR006665 OmpA-like domain NHAM_RS18010 673cd39a0a8c18893e566f5a2e4f86c3 164 PANTHER PTHR30128:SF18 37 162 5.8E-52 T 22-04-2016 NHAM_RS18010 673cd39a0a8c18893e566f5a2e4f86c3 164 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 57 159 5.6E-41 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 NHAM_RS19785 fe104f9f9541aecbd0a5678ec3a790d8 305 SUPERFAMILY SSF56349 47 283 2.8E-12 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS19785 fe104f9f9541aecbd0a5678ec3a790d8 305 Gene3D G3DSA:1.10.443.10 115 286 3.8E-8 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS19785 fe104f9f9541aecbd0a5678ec3a790d8 305 Pfam PF12835 Integrase 113 231 2.3E-8 T 22-04-2016 IPR024456 Integrase catalytic domain, putative NHAM_RS19785 fe104f9f9541aecbd0a5678ec3a790d8 305 Pfam PF12834 Phage integrase, N-terminal 1 88 3.6E-29 T 22-04-2016 IPR024457 Putative integrase, N-terminal NHAM_RS00055 eda6ffc4ca0175b2962813bff9bf69b3 519 PRINTS PR01806 Virulence factor MviN signature 407 424 2.2E-54 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS00055 eda6ffc4ca0175b2962813bff9bf69b3 519 PRINTS PR01806 Virulence factor MviN signature 130 154 2.2E-54 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS00055 eda6ffc4ca0175b2962813bff9bf69b3 519 PRINTS PR01806 Virulence factor MviN signature 154 175 2.2E-54 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS00055 eda6ffc4ca0175b2962813bff9bf69b3 519 PRINTS PR01806 Virulence factor MviN signature 355 374 2.2E-54 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS00055 eda6ffc4ca0175b2962813bff9bf69b3 519 PRINTS PR01806 Virulence factor MviN signature 50 66 2.2E-54 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS00055 eda6ffc4ca0175b2962813bff9bf69b3 519 PRINTS PR01806 Virulence factor MviN signature 31 50 2.2E-54 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS00055 eda6ffc4ca0175b2962813bff9bf69b3 519 PRINTS PR01806 Virulence factor MviN signature 257 283 2.2E-54 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS00055 eda6ffc4ca0175b2962813bff9bf69b3 519 PANTHER PTHR11206 216 517 1.4E-35 T 22-04-2016 NHAM_RS00055 eda6ffc4ca0175b2962813bff9bf69b3 519 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 499 2.1E-102 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS00055 eda6ffc4ca0175b2962813bff9bf69b3 519 PIRSF PIRSF002869 1 511 9.7E-122 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS00055 eda6ffc4ca0175b2962813bff9bf69b3 519 Pfam PF03023 MviN-like protein 27 462 2.4E-89 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS00055 eda6ffc4ca0175b2962813bff9bf69b3 519 PANTHER PTHR11206:SF90 216 517 1.4E-35 T 22-04-2016 NHAM_RS07810 78c99465d7f94851b7734aa82eabc603 63 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 6 60 1.4E-17 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 NHAM_RS07810 78c99465d7f94851b7734aa82eabc603 63 PANTHER PTHR33910 7 63 2.4E-18 T 22-04-2016 NHAM_RS07810 78c99465d7f94851b7734aa82eabc603 63 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 58 6.1E-16 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 NHAM_RS07810 78c99465d7f94851b7734aa82eabc603 63 Gene3D G3DSA:1.20.5.1030 4 60 7.2E-20 T 22-04-2016 NHAM_RS07810 78c99465d7f94851b7734aa82eabc603 63 PANTHER PTHR33910:SF1 7 63 2.4E-18 T 22-04-2016 NHAM_RS07810 78c99465d7f94851b7734aa82eabc603 63 Hamap MF_00422 Protein translocase subunit SecE [secE]. 4 58 11.575 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE NHAM_RS07810 78c99465d7f94851b7734aa82eabc603 63 PRINTS PR01650 Bacterial translocase SecE signature 2 22 1.0E-5 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 NHAM_RS07810 78c99465d7f94851b7734aa82eabc603 63 PRINTS PR01650 Bacterial translocase SecE signature 26 46 1.0E-5 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 NHAM_RS07810 78c99465d7f94851b7734aa82eabc603 63 PRINTS PR01650 Bacterial translocase SecE signature 46 62 1.0E-5 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 NHAM_RS10400 a16c196a6563059992ba0b395d74a846 345 SUPERFAMILY SSF50891 176 288 1.86E-10 T 22-04-2016 IPR029000 Cyclophilin-like domain NHAM_RS10400 a16c196a6563059992ba0b395d74a846 345 SMART SM00797 25 299 1.1E-111 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B NHAM_RS10400 a16c196a6563059992ba0b395d74a846 345 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 8 303 7.2E-75 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B NHAM_RS10400 a16c196a6563059992ba0b395d74a846 345 PANTHER PTHR18866 145 334 2.3E-37 T 22-04-2016 NHAM_RS10400 a16c196a6563059992ba0b395d74a846 345 Pfam PF02626 Allophanate hydrolase subunit 2 26 282 3.4E-74 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B NHAM_RS10400 a16c196a6563059992ba0b395d74a846 345 PANTHER PTHR18866:SF74 145 334 2.3E-37 T 22-04-2016 NHAM_RS10400 a16c196a6563059992ba0b395d74a846 345 Gene3D G3DSA:2.40.100.10 176 295 3.1E-7 T 22-04-2016 IPR029000 Cyclophilin-like domain NHAM_RS14715 0a195fecf2df8e6b8870564eae098397 151 PANTHER PTHR28055:SF1 1 151 1.4E-49 T 22-04-2016 NHAM_RS14715 0a195fecf2df8e6b8870564eae098397 151 PANTHER PTHR28055 1 151 1.4E-49 T 22-04-2016 NHAM_RS14715 0a195fecf2df8e6b8870564eae098397 151 SUPERFAMILY SSF89095 1 149 1.62E-42 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 NHAM_RS14715 0a195fecf2df8e6b8870564eae098397 151 Gene3D G3DSA:1.10.1510.10 2 93 7.6E-32 T 22-04-2016 NHAM_RS14715 0a195fecf2df8e6b8870564eae098397 151 Pfam PF09424 Yqey-like protein 4 149 2.4E-53 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial NHAM_RS14715 0a195fecf2df8e6b8870564eae098397 151 Gene3D G3DSA:1.10.10.410 94 149 1.9E-22 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal NHAM_RS18600 5a97b37ac3adc2156dab2ef623172aff 397 PANTHER PTHR30544:SF5 7 392 6.1E-177 T 22-04-2016 NHAM_RS18600 5a97b37ac3adc2156dab2ef623172aff 397 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 21 381 71.544 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS18600 5a97b37ac3adc2156dab2ef623172aff 397 PANTHER PTHR30544 7 392 6.1E-177 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS18600 5a97b37ac3adc2156dab2ef623172aff 397 SUPERFAMILY SSF102114 128 359 7.46E-14 T 22-04-2016 NHAM_RS18600 5a97b37ac3adc2156dab2ef623172aff 397 Pfam PF04055 Radical SAM superfamily 135 305 8.1E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NHAM_RS18600 5a97b37ac3adc2156dab2ef623172aff 397 PIRSF PIRSF006004 14 395 3.7E-141 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS18600 5a97b37ac3adc2156dab2ef623172aff 397 SMART SM00729 130 352 0.0097 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NHAM_RS18600 5a97b37ac3adc2156dab2ef623172aff 397 Gene3D G3DSA:3.20.20.70 131 369 4.8E-16 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS18600 5a97b37ac3adc2156dab2ef623172aff 397 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 20 380 1.8E-116 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 PIRSF PIRSF000804 1 372 1.3E-122 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 SUPERFAMILY SSF55979 127 250 4.24E-26 T 22-04-2016 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 SUPERFAMILY SSF55979 1 119 2.45E-25 T 22-04-2016 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 1.6E-34 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 Gene3D G3DSA:3.10.150.10 255 372 1.7E-36 T 22-04-2016 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 249 5.1E-34 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 SMART SM00480 17 368 8.8E-125 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 PANTHER PTHR30478 2 372 6.5E-131 T 22-04-2016 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 Gene3D G3DSA:3.10.150.10 126 254 9.9E-37 T 22-04-2016 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 371 3.5E-94 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 252 371 1.1E-31 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 Gene3D G3DSA:3.10.150.10 1 120 2.1E-29 T 22-04-2016 NHAM_RS00010 e17517ee9d2924e0a257d4054032ffdb 372 SUPERFAMILY SSF55979 252 372 2.9E-36 T 22-04-2016 NHAM_RS15170 4d2cc57ff2f251bd6376c677f3d9b780 215 SUPERFAMILY SSF52317 1 196 5.78E-40 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS15170 4d2cc57ff2f251bd6376c677f3d9b780 215 Pfam PF01965 DJ-1/PfpI family 5 152 2.8E-16 T 22-04-2016 IPR002818 DJ-1/PfpI NHAM_RS15170 4d2cc57ff2f251bd6376c677f3d9b780 215 PANTHER PTHR11019 1 201 1.6E-14 T 22-04-2016 NHAM_RS15170 4d2cc57ff2f251bd6376c677f3d9b780 215 Gene3D G3DSA:3.40.50.880 1 200 8.4E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS15170 4d2cc57ff2f251bd6376c677f3d9b780 215 PANTHER PTHR11019:SF131 1 201 1.6E-14 T 22-04-2016 NHAM_RS02430 8d51dbf924bb0d9ddcfd85d42cd15fc3 294 Gene3D G3DSA:3.40.50.150 96 291 4.6E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS02430 8d51dbf924bb0d9ddcfd85d42cd15fc3 294 Gene3D G3DSA:1.10.8.10 9 92 2.6E-23 T 22-04-2016 NHAM_RS02430 8d51dbf924bb0d9ddcfd85d42cd15fc3 294 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 32 287 5.1E-76 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 NHAM_RS02430 8d51dbf924bb0d9ddcfd85d42cd15fc3 294 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 10 291 42.369 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 NHAM_RS02430 8d51dbf924bb0d9ddcfd85d42cd15fc3 294 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 194 200 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NHAM_RS02430 8d51dbf924bb0d9ddcfd85d42cd15fc3 294 PANTHER PTHR18895 9 291 8.1E-83 T 22-04-2016 NHAM_RS02430 8d51dbf924bb0d9ddcfd85d42cd15fc3 294 Pfam PF13847 Methyltransferase domain 125 252 5.6E-13 T 22-04-2016 IPR025714 Methyltransferase domain NHAM_RS02430 8d51dbf924bb0d9ddcfd85d42cd15fc3 294 SUPERFAMILY SSF53335 12 272 2.96E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS02430 8d51dbf924bb0d9ddcfd85d42cd15fc3 294 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 290 6.9E-59 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 NHAM_RS02430 8d51dbf924bb0d9ddcfd85d42cd15fc3 294 PANTHER PTHR18895:SF64 9 291 8.1E-83 T 22-04-2016 NHAM_RS03460 e35ae6f18ff2b118dc60dcb4071ddf12 127 Gene3D G3DSA:3.40.50.2300 3 125 1.6E-30 T 22-04-2016 NHAM_RS03460 e35ae6f18ff2b118dc60dcb4071ddf12 127 SMART SM00448 2 115 8.7E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS03460 e35ae6f18ff2b118dc60dcb4071ddf12 127 Pfam PF00072 Response regulator receiver domain 4 115 6.3E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS03460 e35ae6f18ff2b118dc60dcb4071ddf12 127 SUPERFAMILY SSF52172 3 124 2.85E-30 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS03460 e35ae6f18ff2b118dc60dcb4071ddf12 127 PANTHER PTHR26402 2 124 3.1E-31 T 22-04-2016 NHAM_RS03460 e35ae6f18ff2b118dc60dcb4071ddf12 127 PANTHER PTHR26402:SF481 2 124 3.1E-31 T 22-04-2016 NHAM_RS15090 f146a3452131b1b548d28c86993df3d3 351 PANTHER PTHR26402:SF474 135 335 1.1E-18 T 22-04-2016 NHAM_RS15090 f146a3452131b1b548d28c86993df3d3 351 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 311 323 6.7E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS15090 f146a3452131b1b548d28c86993df3d3 351 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 281 295 6.7E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS15090 f146a3452131b1b548d28c86993df3d3 351 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 295 311 6.7E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS15090 f146a3452131b1b548d28c86993df3d3 351 Gene3D G3DSA:1.10.10.10 281 336 2.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS15090 f146a3452131b1b548d28c86993df3d3 351 Pfam PF00196 Bacterial regulatory proteins, luxR family 281 335 2.6E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS15090 f146a3452131b1b548d28c86993df3d3 351 SUPERFAMILY SSF52172 137 255 1.35E-6 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS15090 f146a3452131b1b548d28c86993df3d3 351 Gene3D G3DSA:3.40.50.2300 136 263 8.4E-6 T 22-04-2016 NHAM_RS15090 f146a3452131b1b548d28c86993df3d3 351 ProSitePatterns PS00622 LuxR-type HTH domain signature. 295 322 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS15090 f146a3452131b1b548d28c86993df3d3 351 PANTHER PTHR26402 135 335 1.1E-18 T 22-04-2016 NHAM_RS15090 f146a3452131b1b548d28c86993df3d3 351 SMART SM00421 278 335 6.0E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS15090 f146a3452131b1b548d28c86993df3d3 351 SUPERFAMILY SSF46894 279 335 2.21E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 Gene3D G3DSA:2.60.40.1560 355 424 1.6E-6 T 22-04-2016 NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 Gene3D G3DSA:2.60.40.1560 456 527 4.7E-7 T 22-04-2016 NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 Gene3D G3DSA:2.60.40.1560 268 336 2.0E-6 T 22-04-2016 NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SUPERFAMILY SSF51126 10 234 1.43E-15 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SUPERFAMILY SSF51126 663 879 1.33E-16 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 Gene3D G3DSA:2.160.20.10 17 222 1.4E-11 T 22-04-2016 IPR012334 Pectin lyase fold NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 Gene3D G3DSA:2.160.20.10 561 893 2.2E-12 T 22-04-2016 IPR012334 Pectin lyase fold NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SUPERFAMILY SSF51120 1080 1255 8.89E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SMART SM00710 851 873 9900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SMART SM00710 31 53 750.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SMART SM00710 189 211 6800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SMART SM00710 823 844 1700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SMART SM00710 102 130 210.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SMART SM00710 764 792 26.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SMART SM00710 132 156 56.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SMART SM00710 55 101 2600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SMART SM00710 717 763 2600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SMART SM00710 161 182 1700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SMART SM00710 693 715 1.5 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 SMART SM00710 794 818 220.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 Pfam PF13229 Right handed beta helix region 27 213 1.8E-8 T 22-04-2016 NHAM_RS15525 de26d1b427e3c95d762cc408c43207fa 1257 Pfam PF13229 Right handed beta helix region 688 874 1.5E-9 T 22-04-2016 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 587 692 3.5E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 SMART SM00387 581 694 1.9E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PANTHER PTHR24423:SF445 417 433 2.4E-76 T 22-04-2016 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PANTHER PTHR24423:SF445 503 697 2.4E-76 T 22-04-2016 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PANTHER PTHR24423:SF445 27 48 2.4E-76 T 22-04-2016 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PANTHER PTHR24423:SF445 149 185 2.4E-76 T 22-04-2016 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PANTHER PTHR24423:SF445 450 482 2.4E-76 T 22-04-2016 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 Gene3D G3DSA:3.30.565.10 538 693 8.4E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 SUPERFAMILY SSF55874 539 692 1.31E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PANTHER PTHR24423 417 433 2.4E-76 T 22-04-2016 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PANTHER PTHR24423 503 697 2.4E-76 T 22-04-2016 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PANTHER PTHR24423 27 48 2.4E-76 T 22-04-2016 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PANTHER PTHR24423 149 185 2.4E-76 T 22-04-2016 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PANTHER PTHR24423 450 482 2.4E-76 T 22-04-2016 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 SMART SM00304 367 420 1.5E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 SUPERFAMILY SSF158472 368 415 2.48E-8 T 22-04-2016 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 9.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 650 9.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 671 9.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 636 9.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS18905 869faf04afb569453c9e4989b6c099fb 708 Pfam PF00672 HAMP domain 348 415 7.3E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NHAM_RS04220 682b0b58d709efdf4c9aac9cb50a49ab 62 SUPERFAMILY SSF50331 1 48 2.43E-7 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal NHAM_RS04220 682b0b58d709efdf4c9aac9cb50a49ab 62 Gene3D G3DSA:2.40.50.100 16 47 9.8E-6 T 22-04-2016 NHAM_RS07745 c9d5e3d71226c7691012f15bcbdbda69 859 Gene3D G3DSA:2.170.130.10 128 242 1.2E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS07745 c9d5e3d71226c7691012f15bcbdbda69 859 PANTHER PTHR32552 55 859 1.3E-258 T 22-04-2016 NHAM_RS07745 c9d5e3d71226c7691012f15bcbdbda69 859 SUPERFAMILY SSF56935 124 859 6.72E-102 T 22-04-2016 NHAM_RS07745 c9d5e3d71226c7691012f15bcbdbda69 859 PANTHER PTHR32552:SF8 55 859 1.3E-258 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 NHAM_RS07745 c9d5e3d71226c7691012f15bcbdbda69 859 Gene3D G3DSA:2.40.170.20 252 859 7.5E-113 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS07745 c9d5e3d71226c7691012f15bcbdbda69 859 Pfam PF00593 TonB dependent receptor 581 857 6.9E-23 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS07745 c9d5e3d71226c7691012f15bcbdbda69 859 Pfam PF07715 TonB-dependent Receptor Plug Domain 137 235 4.9E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS18480 79c5e86016d2ba96efff0d7fb33ae174 422 Gene3D G3DSA:2.40.50.100 91 124 1.5E-22 T 22-04-2016 NHAM_RS18480 79c5e86016d2ba96efff0d7fb33ae174 422 Gene3D G3DSA:2.40.50.100 199 234 1.5E-22 T 22-04-2016 NHAM_RS18480 79c5e86016d2ba96efff0d7fb33ae174 422 PANTHER PTHR30469 17 405 8.5E-152 T 22-04-2016 NHAM_RS18480 79c5e86016d2ba96efff0d7fb33ae174 422 PANTHER PTHR30469:SF12 17 405 8.5E-152 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA NHAM_RS18480 79c5e86016d2ba96efff0d7fb33ae174 422 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 90 313 2.0E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS18480 79c5e86016d2ba96efff0d7fb33ae174 422 SUPERFAMILY SSF111369 80 317 6.02E-58 T 22-04-2016 NHAM_RS18480 79c5e86016d2ba96efff0d7fb33ae174 422 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 70 393 9.6E-76 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS05675 bf9251c576893c77c7ec20b443c7fc63 379 PANTHER PTHR10578:SF76 1 377 2.8E-219 T 22-04-2016 NHAM_RS05675 bf9251c576893c77c7ec20b443c7fc63 379 SUPERFAMILY SSF51395 4 196 8.55E-96 T 22-04-2016 NHAM_RS05675 bf9251c576893c77c7ec20b443c7fc63 379 SUPERFAMILY SSF51395 225 377 8.55E-96 T 22-04-2016 NHAM_RS05675 bf9251c576893c77c7ec20b443c7fc63 379 Gene3D G3DSA:3.20.20.70 4 377 1.3E-129 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS05675 bf9251c576893c77c7ec20b443c7fc63 379 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 275 281 - T 22-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 NHAM_RS05675 bf9251c576893c77c7ec20b443c7fc63 379 Pfam PF01070 FMN-dependent dehydrogenase 15 377 4.5E-127 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 NHAM_RS05675 bf9251c576893c77c7ec20b443c7fc63 379 PANTHER PTHR10578 1 377 2.8E-219 T 22-04-2016 NHAM_RS05675 bf9251c576893c77c7ec20b443c7fc63 379 PIRSF PIRSF000138 1 379 4.3E-122 T 22-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 NHAM_RS01400 5169e8955ec3782b61f086105b09ef69 228 Pfam PF13505 Outer membrane protein beta-barrel domain 31 218 2.6E-17 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel NHAM_RS01400 5169e8955ec3782b61f086105b09ef69 228 Gene3D G3DSA:2.40.160.20 14 224 5.5E-35 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS01400 5169e8955ec3782b61f086105b09ef69 228 SUPERFAMILY SSF56925 42 223 6.2E-29 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS01400 5169e8955ec3782b61f086105b09ef69 228 PANTHER PTHR34001 1 228 6.9E-60 T 22-04-2016 NHAM_RS02065 c0905412ab66877740db48ccddd12d59 161 Pfam PF13629 Pilus formation protein N terminal region 36 105 8.9E-19 T 22-04-2016 IPR032789 Pilus formation protein, N-terminal NHAM_RS01880 d456ef1e795ef2c726bab7ec90e1bf2e 503 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 492 2.5E-206 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NHAM_RS01880 d456ef1e795ef2c726bab7ec90e1bf2e 503 PANTHER PTHR10196:SF44 1 494 0.0 T 22-04-2016 NHAM_RS01880 d456ef1e795ef2c726bab7ec90e1bf2e 503 PIRSF PIRSF000538 3 497 2.1E-160 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NHAM_RS01880 d456ef1e795ef2c726bab7ec90e1bf2e 503 SUPERFAMILY SSF53067 253 495 2.05E-71 T 22-04-2016 NHAM_RS01880 d456ef1e795ef2c726bab7ec90e1bf2e 503 Hamap MF_00186 Glycerol kinase [glpK]. 2 498 52.951 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NHAM_RS01880 d456ef1e795ef2c726bab7ec90e1bf2e 503 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 451 3.4E-51 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 NHAM_RS01880 d456ef1e795ef2c726bab7ec90e1bf2e 503 Gene3D G3DSA:3.30.420.40 252 492 4.6E-86 T 22-04-2016 NHAM_RS01880 d456ef1e795ef2c726bab7ec90e1bf2e 503 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 250 4.4E-75 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 NHAM_RS01880 d456ef1e795ef2c726bab7ec90e1bf2e 503 SUPERFAMILY SSF53067 4 253 4.7E-93 T 22-04-2016 NHAM_RS01880 d456ef1e795ef2c726bab7ec90e1bf2e 503 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 360 380 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 NHAM_RS01880 d456ef1e795ef2c726bab7ec90e1bf2e 503 PANTHER PTHR10196 1 494 0.0 T 22-04-2016 NHAM_RS01880 d456ef1e795ef2c726bab7ec90e1bf2e 503 Gene3D G3DSA:3.30.420.40 3 251 1.2E-98 T 22-04-2016 NHAM_RS04665 86ec49965a0218e2426a6874ab3fef31 243 SMART SM00382 33 220 3.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS04665 86ec49965a0218e2426a6874ab3fef31 243 PANTHER PTHR24220:SF578 6 225 1.5E-102 T 22-04-2016 NHAM_RS04665 86ec49965a0218e2426a6874ab3fef31 243 Gene3D G3DSA:3.40.50.300 4 225 1.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04665 86ec49965a0218e2426a6874ab3fef31 243 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS04665 86ec49965a0218e2426a6874ab3fef31 243 PANTHER PTHR24220 6 225 1.5E-102 T 22-04-2016 NHAM_RS04665 86ec49965a0218e2426a6874ab3fef31 243 SUPERFAMILY SSF52540 5 226 2.93E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04665 86ec49965a0218e2426a6874ab3fef31 243 Pfam PF00005 ABC transporter 25 172 5.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS11615 1d3323dbbe0b530796147d66db1299a0 259 Pfam PF02517 CAAX protease self-immunity 157 246 5.2E-18 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 NHAM_RS07590 bb28cf6d39ecd4b6a396044afd6ac76a 370 Pfam PF11064 Protein of unknown function (DUF2865) 199 313 1.2E-43 T 22-04-2016 IPR021293 Protein of unknown function DUF2865 NHAM_RS15510 ace3bad451dd7c7480f91fe9ce6c30e4 238 Pfam PF00149 Calcineurin-like phosphoesterase 21 212 5.1E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NHAM_RS15510 ace3bad451dd7c7480f91fe9ce6c30e4 238 SUPERFAMILY SSF56300 12 238 3.8E-44 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS15510 ace3bad451dd7c7480f91fe9ce6c30e4 238 Gene3D G3DSA:3.60.21.10 10 238 6.8E-43 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS15510 ace3bad451dd7c7480f91fe9ce6c30e4 238 PANTHER PTHR24032:SF31 6 238 4.3E-26 T 22-04-2016 NHAM_RS15510 ace3bad451dd7c7480f91fe9ce6c30e4 238 PANTHER PTHR24032 6 238 4.3E-26 T 22-04-2016 NHAM_RS02555 b3a04631621cd22bd9a0620766178f0a 377 PANTHER PTHR40253 1 376 4.4E-104 T 22-04-2016 NHAM_RS02555 b3a04631621cd22bd9a0620766178f0a 377 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 96 354 2.1E-67 T 22-04-2016 IPR019285 Protein of unknown function DUF2336 NHAM_RS14850 5969e19872ffb0d960b7d3b7a2c33cfc 208 Gene3D G3DSA:3.20.20.70 12 204 1.2E-58 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS14850 5969e19872ffb0d960b7d3b7a2c33cfc 208 SUPERFAMILY SSF51391 10 203 3.01E-60 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 NHAM_RS14850 5969e19872ffb0d960b7d3b7a2c33cfc 208 PANTHER PTHR20857 1 204 6.9E-53 T 22-04-2016 NHAM_RS14850 5969e19872ffb0d960b7d3b7a2c33cfc 208 Pfam PF02581 Thiamine monophosphate synthase/TENI 18 187 3.2E-50 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 NHAM_RS14850 5969e19872ffb0d960b7d3b7a2c33cfc 208 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 19 198 3.7E-45 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 NHAM_RS13510 8583311d69ad21b98f3e78ca2eb13324 718 PANTHER PTHR23408 27 688 0.0 T 22-04-2016 NHAM_RS13510 8583311d69ad21b98f3e78ca2eb13324 718 Pfam PF02310 B12 binding domain 584 699 1.2E-13 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NHAM_RS13510 8583311d69ad21b98f3e78ca2eb13324 718 Gene3D G3DSA:3.20.20.240 27 495 6.7E-207 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 NHAM_RS13510 8583311d69ad21b98f3e78ca2eb13324 718 Pfam PF01642 Methylmalonyl-CoA mutase 29 541 2.5E-234 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 NHAM_RS13510 8583311d69ad21b98f3e78ca2eb13324 718 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 27 548 4.2E-274 T 22-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 NHAM_RS13510 8583311d69ad21b98f3e78ca2eb13324 718 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 370 395 - T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 NHAM_RS13510 8583311d69ad21b98f3e78ca2eb13324 718 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 581 709 1.2E-57 T 22-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 NHAM_RS13510 8583311d69ad21b98f3e78ca2eb13324 718 SUPERFAMILY SSF51703 25 543 9.16E-217 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 NHAM_RS13510 8583311d69ad21b98f3e78ca2eb13324 718 SUPERFAMILY SSF52242 549 711 6.54E-54 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NHAM_RS13510 8583311d69ad21b98f3e78ca2eb13324 718 Gene3D G3DSA:3.40.50.280 548 709 5.5E-67 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 NHAM_RS13510 8583311d69ad21b98f3e78ca2eb13324 718 PANTHER PTHR23408:SF1 27 688 0.0 T 22-04-2016 NHAM_RS09740 4dd37fed066dad9725cbef7287e4d2b6 215 PANTHER PTHR34606:SF2 1 215 8.7E-41 T 22-04-2016 NHAM_RS09740 4dd37fed066dad9725cbef7287e4d2b6 215 SMART SM00749 7 71 0.033 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NHAM_RS09740 4dd37fed066dad9725cbef7287e4d2b6 215 SMART SM00749 152 215 1.7E-4 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria NHAM_RS09740 4dd37fed066dad9725cbef7287e4d2b6 215 Pfam PF04972 BON domain 78 144 3.3E-14 T 22-04-2016 IPR007055 BON domain NHAM_RS09740 4dd37fed066dad9725cbef7287e4d2b6 215 Pfam PF04972 BON domain 2 69 1.7E-14 T 22-04-2016 IPR007055 BON domain NHAM_RS09740 4dd37fed066dad9725cbef7287e4d2b6 215 Pfam PF04972 BON domain 150 215 6.7E-15 T 22-04-2016 IPR007055 BON domain NHAM_RS09740 4dd37fed066dad9725cbef7287e4d2b6 215 PANTHER PTHR34606 1 215 8.7E-41 T 22-04-2016 NHAM_RS15255 b62d921e1d6f7ccfcaa4137a3a2252d7 313 Gene3D G3DSA:2.40.50.100 156 180 6.2E-13 T 22-04-2016 NHAM_RS15255 b62d921e1d6f7ccfcaa4137a3a2252d7 313 Gene3D G3DSA:2.40.50.100 62 95 6.2E-13 T 22-04-2016 NHAM_RS15255 b62d921e1d6f7ccfcaa4137a3a2252d7 313 PANTHER PTHR30386 1 310 2.1E-25 T 22-04-2016 NHAM_RS15255 b62d921e1d6f7ccfcaa4137a3a2252d7 313 Gene3D G3DSA:1.20.1600.10 98 155 5.9E-4 T 22-04-2016 NHAM_RS15255 b62d921e1d6f7ccfcaa4137a3a2252d7 313 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 238 1.7E-12 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS15255 b62d921e1d6f7ccfcaa4137a3a2252d7 313 SUPERFAMILY SSF111369 61 230 1.26E-23 T 22-04-2016 NHAM_RS15255 b62d921e1d6f7ccfcaa4137a3a2252d7 313 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 245 7.9E-29 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS15255 b62d921e1d6f7ccfcaa4137a3a2252d7 313 PANTHER PTHR30386:SF7 1 310 2.1E-25 T 22-04-2016 NHAM_RS03890 ce088b9bdff1b3e2e1192dad26196392 581 Pfam PF02254 TrkA-N domain 419 540 1.5E-17 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 NHAM_RS03890 ce088b9bdff1b3e2e1192dad26196392 581 Pfam PF00999 Sodium/hydrogen exchanger family 11 366 1.2E-53 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NHAM_RS03890 ce088b9bdff1b3e2e1192dad26196392 581 SUPERFAMILY SSF51735 418 552 7.09E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS03890 ce088b9bdff1b3e2e1192dad26196392 581 PANTHER PTHR16254 2 392 5.5E-140 T 22-04-2016 NHAM_RS03890 ce088b9bdff1b3e2e1192dad26196392 581 PANTHER PTHR16254 413 539 5.5E-140 T 22-04-2016 NHAM_RS03890 ce088b9bdff1b3e2e1192dad26196392 581 PANTHER PTHR16254:SF14 2 392 5.5E-140 T 22-04-2016 NHAM_RS03890 ce088b9bdff1b3e2e1192dad26196392 581 PANTHER PTHR16254:SF14 413 539 5.5E-140 T 22-04-2016 NHAM_RS03890 ce088b9bdff1b3e2e1192dad26196392 581 Gene3D G3DSA:3.40.50.720 417 554 5.7E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS20150 3870fb4686ebf9c32561cb85af609f5d 456 Pfam PF13546 DDE superfamily endonuclease 30 293 3.4E-86 T 22-04-2016 NHAM_RS20150 3870fb4686ebf9c32561cb85af609f5d 456 PANTHER PTHR33627:SF1 2 448 1.2E-176 T 22-04-2016 NHAM_RS20150 3870fb4686ebf9c32561cb85af609f5d 456 SUPERFAMILY SSF53098 68 416 1.59E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS20150 3870fb4686ebf9c32561cb85af609f5d 456 PANTHER PTHR33627 2 448 1.2E-176 T 22-04-2016 NHAM_RS03935 f10c0ba44d4182e30ec714f0f8c73ffa 375 Pfam PF06904 Extensin-like protein C-terminus 80 256 5.2E-48 T 22-04-2016 IPR009683 Extensin-like, C-terminal NHAM_RS03485 b2e44e324e8dfbe9abc6715aa16f92ed 255 SUPERFAMILY SSF69593 14 245 5.36E-41 T 22-04-2016 NHAM_RS03485 b2e44e324e8dfbe9abc6715aa16f92ed 255 SMART SM00563 73 187 2.4E-25 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NHAM_RS03485 b2e44e324e8dfbe9abc6715aa16f92ed 255 Gene3D G3DSA:3.40.1130.10 70 212 8.4E-18 T 22-04-2016 NHAM_RS03485 b2e44e324e8dfbe9abc6715aa16f92ed 255 PANTHER PTHR10434 1 228 1.6E-41 T 22-04-2016 NHAM_RS03485 b2e44e324e8dfbe9abc6715aa16f92ed 255 Pfam PF01553 Acyltransferase 64 184 1.6E-16 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NHAM_RS02535 73aae3642d26005683e223a6c1f181f5 224 ProSitePatterns PS01128 Shikimate kinase signature. 81 106 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS02535 73aae3642d26005683e223a6c1f181f5 224 Hamap MF_00109 Shikimate kinase [aroK]. 25 190 28.302 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS02535 73aae3642d26005683e223a6c1f181f5 224 Gene3D G3DSA:3.40.50.300 25 190 3.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02535 73aae3642d26005683e223a6c1f181f5 224 PANTHER PTHR21087 16 194 2.8E-59 T 22-04-2016 NHAM_RS02535 73aae3642d26005683e223a6c1f181f5 224 PANTHER PTHR21087:SF0 16 194 2.8E-59 T 22-04-2016 NHAM_RS02535 73aae3642d26005683e223a6c1f181f5 224 Pfam PF01202 Shikimate kinase 34 189 1.3E-48 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS02535 73aae3642d26005683e223a6c1f181f5 224 PRINTS PR01100 Shikimate kinase family signature 98 107 1.2E-22 T 22-04-2016 NHAM_RS02535 73aae3642d26005683e223a6c1f181f5 224 PRINTS PR01100 Shikimate kinase family signature 52 65 1.2E-22 T 22-04-2016 NHAM_RS02535 73aae3642d26005683e223a6c1f181f5 224 PRINTS PR01100 Shikimate kinase family signature 119 136 1.2E-22 T 22-04-2016 NHAM_RS02535 73aae3642d26005683e223a6c1f181f5 224 PRINTS PR01100 Shikimate kinase family signature 28 43 1.2E-22 T 22-04-2016 NHAM_RS02535 73aae3642d26005683e223a6c1f181f5 224 PRINTS PR01100 Shikimate kinase family signature 80 88 1.2E-22 T 22-04-2016 NHAM_RS02535 73aae3642d26005683e223a6c1f181f5 224 SUPERFAMILY SSF52540 25 192 2.5E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18310 7720f7c50ee9aa74c2b846b3d3a86b5d 252 Pfam PF00072 Response regulator receiver domain 142 209 4.8E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS18310 7720f7c50ee9aa74c2b846b3d3a86b5d 252 Gene3D G3DSA:3.40.50.2300 135 244 3.6E-12 T 22-04-2016 NHAM_RS18310 7720f7c50ee9aa74c2b846b3d3a86b5d 252 SUPERFAMILY SSF52172 139 243 1.29E-13 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS18310 7720f7c50ee9aa74c2b846b3d3a86b5d 252 PIRSF PIRSF036400 1 247 4.7E-106 T 22-04-2016 IPR014605 Signal transduction response regulator PhyR-like, alphaproteobacteria NHAM_RS19920 315ad11669af64cc849ab6d519a18fae 159 PANTHER PTHR30007:SF0 16 152 1.2E-41 T 22-04-2016 NHAM_RS19920 315ad11669af64cc849ab6d519a18fae 159 PANTHER PTHR30007 16 152 1.2E-41 T 22-04-2016 NHAM_RS19920 315ad11669af64cc849ab6d519a18fae 159 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 94 3.1E-26 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS03230 3ce12407734c5cef790f3f27c9c32970 228 Pfam PF07077 Protein of unknown function (DUF1345) 51 219 1.8E-59 T 22-04-2016 IPR009781 Protein of unknown function DUF1345 NHAM_RS00920 80ab3ae56c2ecf339f9ef996cf8f98ca 322 PANTHER PTHR12126 1 317 1.2E-99 T 22-04-2016 NHAM_RS00920 80ab3ae56c2ecf339f9ef996cf8f98ca 322 Pfam PF05368 NmrA-like family 9 238 2.0E-14 T 22-04-2016 IPR008030 NmrA-like domain NHAM_RS00920 80ab3ae56c2ecf339f9ef996cf8f98ca 322 SUPERFAMILY SSF51735 6 307 5.91E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00920 80ab3ae56c2ecf339f9ef996cf8f98ca 322 PANTHER PTHR12126:SF1 1 317 1.2E-99 T 22-04-2016 NHAM_RS00920 80ab3ae56c2ecf339f9ef996cf8f98ca 322 Gene3D G3DSA:3.40.50.720 5 233 3.7E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS08015 371252375b3e3e6877b83a24b60e4a55 208 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NHAM_RS08015 371252375b3e3e6877b83a24b60e4a55 208 PRINTS PR00094 Adenylate kinase signature 156 170 5.3E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NHAM_RS08015 371252375b3e3e6877b83a24b60e4a55 208 PRINTS PR00094 Adenylate kinase signature 81 97 5.3E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NHAM_RS08015 371252375b3e3e6877b83a24b60e4a55 208 PRINTS PR00094 Adenylate kinase signature 32 46 5.3E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NHAM_RS08015 371252375b3e3e6877b83a24b60e4a55 208 PRINTS PR00094 Adenylate kinase signature 139 154 5.3E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NHAM_RS08015 371252375b3e3e6877b83a24b60e4a55 208 PRINTS PR00094 Adenylate kinase signature 4 17 5.3E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NHAM_RS08015 371252375b3e3e6877b83a24b60e4a55 208 Hamap MF_00235 Adenylate kinase [adk]. 1 192 43.109 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NHAM_RS08015 371252375b3e3e6877b83a24b60e4a55 208 Gene3D G3DSA:3.40.50.300 1 190 2.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS08015 371252375b3e3e6877b83a24b60e4a55 208 TIGRFAM TIGR01351 adk: adenylate kinase 2 191 3.0E-62 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NHAM_RS08015 371252375b3e3e6877b83a24b60e4a55 208 PANTHER PTHR23359 1 195 3.9E-79 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 NHAM_RS08015 371252375b3e3e6877b83a24b60e4a55 208 Pfam PF00406 Adenylate kinase 5 169 2.3E-54 T 22-04-2016 NHAM_RS08015 371252375b3e3e6877b83a24b60e4a55 208 SUPERFAMILY SSF52540 1 193 1.7E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS18055 0b534bfcc21b840c0511590315828128 139 Pfam PF03795 YCII-related domain 1 115 3.7E-27 T 22-04-2016 IPR005545 YCII-related NHAM_RS18055 0b534bfcc21b840c0511590315828128 139 PANTHER PTHR35174:SF2 2 129 9.8E-82 T 22-04-2016 NHAM_RS18055 0b534bfcc21b840c0511590315828128 139 PANTHER PTHR35174 2 129 9.8E-82 T 22-04-2016 NHAM_RS18055 0b534bfcc21b840c0511590315828128 139 Gene3D G3DSA:3.30.70.1060 1 117 1.6E-38 T 22-04-2016 NHAM_RS18055 0b534bfcc21b840c0511590315828128 139 SUPERFAMILY SSF54909 1 117 2.47E-35 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel NHAM_RS10425 82977be0c20b0372e896c6b06eccc372 408 SUPERFAMILY SSF51905 11 179 1.84E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS10425 82977be0c20b0372e896c6b06eccc372 408 SUPERFAMILY SSF51905 278 396 1.84E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS10425 82977be0c20b0372e896c6b06eccc372 408 Gene3D G3DSA:3.50.50.60 11 184 7.8E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS10425 82977be0c20b0372e896c6b06eccc372 408 Gene3D G3DSA:3.50.50.60 270 345 7.8E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS10425 82977be0c20b0372e896c6b06eccc372 408 Pfam PF01494 FAD binding domain 11 314 1.3E-31 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 NHAM_RS10425 82977be0c20b0372e896c6b06eccc372 408 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 12 389 3.6E-103 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 NHAM_RS10425 82977be0c20b0372e896c6b06eccc372 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 1.3E-23 T 22-04-2016 NHAM_RS10425 82977be0c20b0372e896c6b06eccc372 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 1.3E-23 T 22-04-2016 NHAM_RS10425 82977be0c20b0372e896c6b06eccc372 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 1.3E-23 T 22-04-2016 NHAM_RS10425 82977be0c20b0372e896c6b06eccc372 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 1.3E-23 T 22-04-2016 NHAM_RS10425 82977be0c20b0372e896c6b06eccc372 408 PANTHER PTHR13789 7 389 3.0E-97 T 22-04-2016 NHAM_RS10425 82977be0c20b0372e896c6b06eccc372 408 PANTHER PTHR13789:SF5 7 389 3.0E-97 T 22-04-2016 NHAM_RS06030 718b56eaf54f778ce95690ac430c78f0 150 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 52 1.9E-7 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS06030 718b56eaf54f778ce95690ac430c78f0 150 Gene3D G3DSA:3.10.20.30 2 74 1.2E-27 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS06030 718b56eaf54f778ce95690ac430c78f0 150 Pfam PF01799 [2Fe-2S] binding domain 73 146 4.1E-25 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NHAM_RS06030 718b56eaf54f778ce95690ac430c78f0 150 SUPERFAMILY SSF54292 2 77 4.59E-24 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NHAM_RS06030 718b56eaf54f778ce95690ac430c78f0 150 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NHAM_RS06030 718b56eaf54f778ce95690ac430c78f0 150 PANTHER PTHR11908 1 135 1.2E-33 T 22-04-2016 NHAM_RS06030 718b56eaf54f778ce95690ac430c78f0 150 SUPERFAMILY SSF47741 84 150 3.79E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NHAM_RS06030 718b56eaf54f778ce95690ac430c78f0 150 Gene3D G3DSA:1.10.150.120 75 149 1.7E-28 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NHAM_RS18875 47e0d00e99a6df9347854e88e1c7015e 199 Pfam PF03734 L,D-transpeptidase catalytic domain 66 193 3.2E-15 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NHAM_RS18875 47e0d00e99a6df9347854e88e1c7015e 199 PANTHER PTHR30582:SF1 46 193 1.5E-64 T 22-04-2016 NHAM_RS18875 47e0d00e99a6df9347854e88e1c7015e 199 PANTHER PTHR30582 46 193 1.5E-64 T 22-04-2016 NHAM_RS18875 47e0d00e99a6df9347854e88e1c7015e 199 SUPERFAMILY SSF141523 59 194 6.28E-33 T 22-04-2016 NHAM_RS18875 47e0d00e99a6df9347854e88e1c7015e 199 Gene3D G3DSA:2.40.440.10 60 194 3.4E-35 T 22-04-2016 NHAM_RS19335 f2f35751c9ca92c030adaaa8995b24b8 124 Gene3D G3DSA:3.90.1680.10 2 83 6.2E-8 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS19335 f2f35751c9ca92c030adaaa8995b24b8 124 PANTHER PTHR13604 94 124 1.2E-24 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS19335 f2f35751c9ca92c030adaaa8995b24b8 124 PANTHER PTHR13604 2 74 1.2E-24 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS19335 f2f35751c9ca92c030adaaa8995b24b8 124 SUPERFAMILY SSF143081 2 124 6.15E-30 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS19335 f2f35751c9ca92c030adaaa8995b24b8 124 PANTHER PTHR13604:SF1 94 124 1.2E-24 T 22-04-2016 NHAM_RS19335 f2f35751c9ca92c030adaaa8995b24b8 124 PANTHER PTHR13604:SF1 2 74 1.2E-24 T 22-04-2016 NHAM_RS05610 7e1fd5dc62e069319cddbef3f00128fc 383 Pfam PF07995 Glucose / Sorbosone dehydrogenase 51 377 6.4E-137 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 NHAM_RS05610 7e1fd5dc62e069319cddbef3f00128fc 383 Gene3D G3DSA:2.120.10.30 37 382 7.0E-113 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like NHAM_RS05610 7e1fd5dc62e069319cddbef3f00128fc 383 SUPERFAMILY SSF50952 41 382 9.29E-51 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 NHAM_RS05610 7e1fd5dc62e069319cddbef3f00128fc 383 PANTHER PTHR19328 39 382 5.9E-79 T 22-04-2016 NHAM_RS17615 f507448a2f46c0bea4a1ed5ceb2fd448 145 PANTHER PTHR36919:SF2 18 142 3.5E-48 T 22-04-2016 NHAM_RS17615 f507448a2f46c0bea4a1ed5ceb2fd448 145 PANTHER PTHR36919 18 142 3.5E-48 T 22-04-2016 NHAM_RS17615 f507448a2f46c0bea4a1ed5ceb2fd448 145 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 29 142 9.0E-26 T 22-04-2016 IPR019223 Domain of unknown function DUF2147 NHAM_RS15650 962e197d20cd2b395f37032370e49ebc 299 Pfam PF00483 Nucleotidyl transferase 3 238 3.3E-65 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NHAM_RS15650 962e197d20cd2b395f37032370e49ebc 299 Gene3D G3DSA:3.90.550.10 1 268 3.1E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS15650 962e197d20cd2b395f37032370e49ebc 299 PANTHER PTHR22572:SF105 3 268 1.3E-158 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NHAM_RS15650 962e197d20cd2b395f37032370e49ebc 299 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 3 287 1.9E-147 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NHAM_RS15650 962e197d20cd2b395f37032370e49ebc 299 SUPERFAMILY SSF53448 2 288 1.08E-88 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS15650 962e197d20cd2b395f37032370e49ebc 299 PANTHER PTHR22572 3 268 1.3E-158 T 22-04-2016 NHAM_RS07665 95265a4fe4d877abcc14e13ddfbc250f 111 SMART SM00450 11 106 1.4E-12 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS07665 95265a4fe4d877abcc14e13ddfbc250f 111 Pfam PF00581 Rhodanese-like domain 12 102 1.0E-7 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS07665 95265a4fe4d877abcc14e13ddfbc250f 111 Gene3D G3DSA:3.40.250.10 8 108 1.6E-20 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS07665 95265a4fe4d877abcc14e13ddfbc250f 111 SUPERFAMILY SSF52821 7 109 2.1E-21 T 22-04-2016 IPR001763 Rhodanese-like domain NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 SUPERFAMILY SSF51126 52 352 1.79E-48 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 PANTHER PTHR12338:SF6 53 292 9.2E-74 T 22-04-2016 NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 SMART SM00912 1274 1386 1.3E-35 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 SMART SM00912 55 167 1.9E-38 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 1308 1382 5.5E-23 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 89 164 3.8E-22 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 PANTHER PTHR12338 53 292 9.2E-74 T 22-04-2016 NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 Gene3D G3DSA:2.160.20.10 75 317 4.9E-18 T 22-04-2016 IPR012334 Pectin lyase fold NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 Gene3D G3DSA:2.160.20.10 1310 1494 1.6E-12 T 22-04-2016 IPR012334 Pectin lyase fold NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 Gene3D G3DSA:2.160.20.10 1526 1569 1.6E-12 T 22-04-2016 IPR012334 Pectin lyase fold NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 SUPERFAMILY SSF51126 1280 1503 6.59E-33 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 Pfam PF05860 haemagglutination activity domain 62 167 1.4E-21 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal NHAM_RS03760 ab4ba2c09feb44399400b0a261b07215 2335 Pfam PF05860 haemagglutination activity domain 1296 1383 9.7E-22 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal NHAM_RS09545 adb3a9e9d59db1fe919337f90608b812 395 PANTHER PTHR23520:SF5 2 395 1.2E-67 T 22-04-2016 NHAM_RS09545 adb3a9e9d59db1fe919337f90608b812 395 PANTHER PTHR23520 2 395 1.2E-67 T 22-04-2016 NHAM_RS09545 adb3a9e9d59db1fe919337f90608b812 395 Pfam PF07690 Major Facilitator Superfamily 220 391 1.3E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS09545 adb3a9e9d59db1fe919337f90608b812 395 SUPERFAMILY SSF103473 2 386 8.37E-34 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS09545 adb3a9e9d59db1fe919337f90608b812 395 Gene3D G3DSA:1.20.1250.20 217 369 2.2E-12 T 22-04-2016 NHAM_RS09545 adb3a9e9d59db1fe919337f90608b812 395 Gene3D G3DSA:1.20.1250.20 2 193 4.0E-13 T 22-04-2016 NHAM_RS02840 801d553bebb38b678a0864c7513215e3 178 Gene3D G3DSA:3.90.1140.10 3 177 1.1E-47 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase NHAM_RS02840 801d553bebb38b678a0864c7513215e3 178 PANTHER PTHR35561 3 178 1.4E-51 T 22-04-2016 NHAM_RS02840 801d553bebb38b678a0864c7513215e3 178 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 2 176 1.2E-42 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 NHAM_RS02840 801d553bebb38b678a0864c7513215e3 178 SUPERFAMILY SSF55144 2 176 7.85E-43 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase NHAM_RS02840 801d553bebb38b678a0864c7513215e3 178 PANTHER PTHR35561:SF1 3 178 1.4E-51 T 22-04-2016 NHAM_RS02840 801d553bebb38b678a0864c7513215e3 178 Pfam PF13563 2'-5' RNA ligase superfamily 31 158 4.4E-18 T 22-04-2016 NHAM_RS02840 801d553bebb38b678a0864c7513215e3 178 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 2 176 23.505 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 NHAM_RS06035 a5e97f54e7c3a90fab022cd355bb9a58 420 Pfam PF00034 Cytochrome c 47 146 6.9E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS06035 a5e97f54e7c3a90fab022cd355bb9a58 420 Gene3D G3DSA:1.10.760.10 188 292 2.7E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS06035 a5e97f54e7c3a90fab022cd355bb9a58 420 Gene3D G3DSA:1.10.760.10 44 146 1.9E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS06035 a5e97f54e7c3a90fab022cd355bb9a58 420 SUPERFAMILY SSF46626 43 153 1.03E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS06035 a5e97f54e7c3a90fab022cd355bb9a58 420 PANTHER PTHR35008:SF2 9 419 2.1E-117 T 22-04-2016 NHAM_RS06035 a5e97f54e7c3a90fab022cd355bb9a58 420 Gene3D G3DSA:1.10.760.10 318 403 2.7E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS06035 a5e97f54e7c3a90fab022cd355bb9a58 420 SUPERFAMILY SSF46626 318 405 4.65E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS06035 a5e97f54e7c3a90fab022cd355bb9a58 420 PIRSF PIRSF000018 14 420 3.5E-132 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 NHAM_RS06035 a5e97f54e7c3a90fab022cd355bb9a58 420 SUPERFAMILY SSF46626 189 292 1.49E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS06035 a5e97f54e7c3a90fab022cd355bb9a58 420 PANTHER PTHR35008 9 419 2.1E-117 T 22-04-2016 NHAM_RS06035 a5e97f54e7c3a90fab022cd355bb9a58 420 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 314 393 3.8E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS13935 d9522ce7047f6bc3246969f25f80bae8 519 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 223 1.5E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS13935 d9522ce7047f6bc3246969f25f80bae8 519 Gene3D G3DSA:3.40.190.10 253 359 3.2E-28 T 22-04-2016 NHAM_RS13935 d9522ce7047f6bc3246969f25f80bae8 519 Gene3D G3DSA:3.40.190.120 360 456 1.2E-28 T 22-04-2016 NHAM_RS13935 d9522ce7047f6bc3246969f25f80bae8 519 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 257 511 3.1E-48 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 NHAM_RS13935 d9522ce7047f6bc3246969f25f80bae8 519 SUPERFAMILY SSF161098 16 214 2.49E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS13935 d9522ce7047f6bc3246969f25f80bae8 519 PANTHER PTHR30177:SF4 9 219 4.1E-174 T 22-04-2016 NHAM_RS13935 d9522ce7047f6bc3246969f25f80bae8 519 PANTHER PTHR30177:SF4 285 519 4.1E-174 T 22-04-2016 NHAM_RS13935 d9522ce7047f6bc3246969f25f80bae8 519 Gene3D G3DSA:1.10.3720.10 13 211 6.9E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS13935 d9522ce7047f6bc3246969f25f80bae8 519 PANTHER PTHR30177 9 219 4.1E-174 T 22-04-2016 NHAM_RS13935 d9522ce7047f6bc3246969f25f80bae8 519 PANTHER PTHR30177 285 519 4.1E-174 T 22-04-2016 NHAM_RS13935 d9522ce7047f6bc3246969f25f80bae8 519 SUPERFAMILY SSF53850 257 511 2.43E-55 T 22-04-2016 NHAM_RS13300 9f482d3f0c531466f7d9bb7b0c60eb6d 267 SUPERFAMILY SSF117396 7 266 3.79E-68 T 22-04-2016 IPR002763 Protein of unknown function DUF72 NHAM_RS13300 9f482d3f0c531466f7d9bb7b0c60eb6d 267 Pfam PF01904 Protein of unknown function DUF72 25 264 2.2E-55 T 22-04-2016 IPR002763 Protein of unknown function DUF72 NHAM_RS13300 9f482d3f0c531466f7d9bb7b0c60eb6d 267 PANTHER PTHR30348:SF7 4 222 1.3E-138 T 22-04-2016 NHAM_RS13300 9f482d3f0c531466f7d9bb7b0c60eb6d 267 PANTHER PTHR30348:SF7 240 266 1.3E-138 T 22-04-2016 NHAM_RS13300 9f482d3f0c531466f7d9bb7b0c60eb6d 267 PANTHER PTHR30348 4 222 1.3E-138 T 22-04-2016 NHAM_RS13300 9f482d3f0c531466f7d9bb7b0c60eb6d 267 PANTHER PTHR30348 240 266 1.3E-138 T 22-04-2016 NHAM_RS13300 9f482d3f0c531466f7d9bb7b0c60eb6d 267 Gene3D G3DSA:3.20.20.410 4 266 7.6E-73 T 22-04-2016 IPR002763 Protein of unknown function DUF72 NHAM_RS07330 2a3894c6438c121571418150038f94fd 144 PIRSF PIRSF002721 1 144 2.6E-40 T 22-04-2016 IPR016364 Surface antigen, Rickettsia type NHAM_RS07330 2a3894c6438c121571418150038f94fd 144 Pfam PF16998 17 kDa outer membrane surface antigen 62 141 1.7E-8 T 22-04-2016 IPR032635 Surface antigen domain NHAM_RS09500 17df9017d766b58e7a9d56221ba0a11b 791 Pfam PF00665 Integrase core domain 358 479 5.2E-12 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS09500 17df9017d766b58e7a9d56221ba0a11b 791 SUPERFAMILY SSF53098 363 544 1.63E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS09500 17df9017d766b58e7a9d56221ba0a11b 791 Gene3D G3DSA:3.30.420.10 341 536 2.1E-18 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS06910 a45b174d7eae530aff9bfdaeeba3e376 995 Pfam PF06634 Protein of unknown function (DUF1156) 26 78 2.4E-17 T 22-04-2016 IPR009537 Domain of unknown function DUF1156 NHAM_RS06910 a45b174d7eae530aff9bfdaeeba3e376 995 SUPERFAMILY SSF53335 608 620 3.86E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS06910 a45b174d7eae530aff9bfdaeeba3e376 995 SUPERFAMILY SSF53335 655 751 3.86E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS06910 a45b174d7eae530aff9bfdaeeba3e376 995 Gene3D G3DSA:3.40.50.150 204 253 4.8E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS06910 a45b174d7eae530aff9bfdaeeba3e376 995 SUPERFAMILY SSF53335 194 257 1.45E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS14180 84ba0d43fec617350c910b8c0fad4dda 357 PANTHER PTHR10366:SF33 10 343 3.0E-132 T 22-04-2016 NHAM_RS14180 84ba0d43fec617350c910b8c0fad4dda 357 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 6 329 8.9E-140 T 22-04-2016 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833|UniPathway: UPA00055|UniPathway: UPA00281 NHAM_RS14180 84ba0d43fec617350c910b8c0fad4dda 357 SUPERFAMILY SSF51735 8 326 6.86E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14180 84ba0d43fec617350c910b8c0fad4dda 357 Pfam PF16363 GDP-mannose 4,6 dehydratase 12 318 7.8E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14180 84ba0d43fec617350c910b8c0fad4dda 357 Gene3D G3DSA:3.90.25.10 200 343 7.9E-42 T 22-04-2016 NHAM_RS14180 84ba0d43fec617350c910b8c0fad4dda 357 PANTHER PTHR10366 10 343 3.0E-132 T 22-04-2016 NHAM_RS14180 84ba0d43fec617350c910b8c0fad4dda 357 Gene3D G3DSA:3.40.50.720 10 199 8.6E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS16125 0d2b0394705594dc231b05e30d191f3a 83 PANTHER PTHR33359 1 83 1.3E-20 T 22-04-2016 NHAM_RS16125 0d2b0394705594dc231b05e30d191f3a 83 Gene3D G3DSA:3.10.20.30 1 83 3.6E-21 T 22-04-2016 IPR012675 Beta-grasp domain NHAM_RS16125 0d2b0394705594dc231b05e30d191f3a 83 Pfam PF02597 ThiS family 3 83 3.2E-16 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 NHAM_RS16125 0d2b0394705594dc231b05e30d191f3a 83 SUPERFAMILY SSF54285 1 83 4.86E-19 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NHAM_RS16125 0d2b0394705594dc231b05e30d191f3a 83 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 1 83 2.4E-23 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 NHAM_RS01105 6cd8fbdcacffcd2ca9aaa3642a73f350 368 PANTHER PTHR11241 3 182 1.2E-53 T 22-04-2016 NHAM_RS01105 6cd8fbdcacffcd2ca9aaa3642a73f350 368 Gene3D G3DSA:2.70.40.10 174 344 1.2E-66 T 22-04-2016 IPR029054 dUTPase-like NHAM_RS01105 6cd8fbdcacffcd2ca9aaa3642a73f350 368 Gene3D G3DSA:2.70.40.10 11 172 5.4E-60 T 22-04-2016 IPR029054 dUTPase-like NHAM_RS01105 6cd8fbdcacffcd2ca9aaa3642a73f350 368 PANTHER PTHR11241:SF1 3 182 1.2E-53 T 22-04-2016 NHAM_RS01105 6cd8fbdcacffcd2ca9aaa3642a73f350 368 SUPERFAMILY SSF51283 12 172 2.22E-30 T 22-04-2016 IPR029054 dUTPase-like NHAM_RS01105 6cd8fbdcacffcd2ca9aaa3642a73f350 368 SUPERFAMILY SSF51283 202 342 2.07E-22 T 22-04-2016 IPR029054 dUTPase-like NHAM_RS01105 6cd8fbdcacffcd2ca9aaa3642a73f350 368 Pfam PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) 10 367 3.6E-174 T 22-04-2016 IPR010550 Deoxycytidine triphosphate deaminase, bacterial GO:0008829|GO:0009394 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 NHAM_RS17855 9abba5c325c75c2cec23b0138583826d 293 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 184 1.2E-60 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NHAM_RS17855 9abba5c325c75c2cec23b0138583826d 293 SUPERFAMILY SSF51735 4 187 3.79E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS17855 9abba5c325c75c2cec23b0138583826d 293 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 185 210 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NHAM_RS17855 9abba5c325c75c2cec23b0138583826d 293 PANTHER PTHR23309 5 291 1.2E-139 T 22-04-2016 NHAM_RS17855 9abba5c325c75c2cec23b0138583826d 293 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 284 6.4E-33 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 NHAM_RS17855 9abba5c325c75c2cec23b0138583826d 293 Gene3D G3DSA:3.40.50.720 4 190 1.8E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS17855 9abba5c325c75c2cec23b0138583826d 293 Gene3D G3DSA:1.10.1040.10 191 285 2.4E-35 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NHAM_RS17855 9abba5c325c75c2cec23b0138583826d 293 SUPERFAMILY SSF48179 187 289 1.45E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS17855 9abba5c325c75c2cec23b0138583826d 293 PIRSF PIRSF000105 1 293 3.7E-84 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 NHAM_RS17675 1ed4f47af7d8c59e8c394b7198391fa7 225 PANTHER PTHR30598:SF3 1 215 1.7E-47 T 22-04-2016 NHAM_RS17675 1ed4f47af7d8c59e8c394b7198391fa7 225 Gene3D G3DSA:1.20.950.20 2 211 1.0E-51 T 22-04-2016 NHAM_RS17675 1ed4f47af7d8c59e8c394b7198391fa7 225 PANTHER PTHR30598 1 215 1.7E-47 T 22-04-2016 NHAM_RS17675 1ed4f47af7d8c59e8c394b7198391fa7 225 SUPERFAMILY SSF103501 1 215 1.22E-55 T 22-04-2016 IPR023234 NarG-like domain NHAM_RS17675 1ed4f47af7d8c59e8c394b7198391fa7 225 Pfam PF02665 Nitrate reductase gamma subunit 4 216 2.2E-67 T 22-04-2016 IPR023234 NarG-like domain NHAM_RS17675 1ed4f47af7d8c59e8c394b7198391fa7 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 2 216 1.8E-39 T 22-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 NHAM_RS16410 fc467d929d149315ce0541f742347d67 438 SUPERFAMILY SSF52402 356 422 5.02E-5 T 22-04-2016 NHAM_RS16410 fc467d929d149315ce0541f742347d67 438 Pfam PF02754 Cysteine-rich domain 328 411 1.8E-11 T 22-04-2016 IPR004017 Cysteine-rich domain NHAM_RS16410 fc467d929d149315ce0541f742347d67 438 Pfam PF02754 Cysteine-rich domain 195 281 7.0E-12 T 22-04-2016 IPR004017 Cysteine-rich domain NHAM_RS16410 fc467d929d149315ce0541f742347d67 438 PIRSF PIRSF000139 5 434 1.6E-132 T 22-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit NHAM_RS16410 fc467d929d149315ce0541f742347d67 438 SUPERFAMILY SSF54862 21 117 8.79E-21 T 22-04-2016 NHAM_RS16410 fc467d929d149315ce0541f742347d67 438 Gene3D G3DSA:1.10.1060.10 19 110 4.1E-22 T 22-04-2016 NHAM_RS16410 fc467d929d149315ce0541f742347d67 438 PANTHER PTHR32479 14 414 7.8E-138 T 22-04-2016 NHAM_RS16410 fc467d929d149315ce0541f742347d67 438 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NHAM_RS16410 fc467d929d149315ce0541f742347d67 438 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NHAM_RS16410 fc467d929d149315ce0541f742347d67 438 PANTHER PTHR32479:SF2 14 414 7.8E-138 T 22-04-2016 NHAM_RS16410 fc467d929d149315ce0541f742347d67 438 Pfam PF12838 4Fe-4S dicluster domain 24 90 1.4E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NHAM_RS05775 115e33bc27c540c199576fab0f855d6b 481 PANTHER PTHR30163:SF4 95 479 8.0E-238 T 22-04-2016 NHAM_RS05775 115e33bc27c540c199576fab0f855d6b 481 PANTHER PTHR30163 95 479 8.0E-238 T 22-04-2016 IPR011757 Lytic transglycosylase MltB NHAM_RS05775 115e33bc27c540c199576fab0f855d6b 481 Gene3D G3DSA:1.10.530.10 154 211 1.0E-53 T 22-04-2016 NHAM_RS05775 115e33bc27c540c199576fab0f855d6b 481 Gene3D G3DSA:1.10.530.10 292 407 1.0E-53 T 22-04-2016 NHAM_RS05775 115e33bc27c540c199576fab0f855d6b 481 SUPERFAMILY SSF47090 409 479 9.68E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS05775 115e33bc27c540c199576fab0f855d6b 481 Gene3D G3DSA:1.10.101.10 427 479 1.2E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS05775 115e33bc27c540c199576fab0f855d6b 481 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 110 406 3.4E-101 T 22-04-2016 IPR011970 Lytic murein transglycosylase NHAM_RS05775 115e33bc27c540c199576fab0f855d6b 481 Pfam PF13406 Transglycosylase SLT domain 111 402 7.6E-100 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 NHAM_RS05775 115e33bc27c540c199576fab0f855d6b 481 Pfam PF01471 Putative peptidoglycan binding domain 425 478 7.8E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS05775 115e33bc27c540c199576fab0f855d6b 481 SUPERFAMILY SSF53955 98 408 8.81E-92 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS06645 a05a40038fd71b24e7e885a4dcc60339 339 PRINTS PR01713 Nucleotide sugar epimerase signature 219 234 2.8E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NHAM_RS06645 a05a40038fd71b24e7e885a4dcc60339 339 PRINTS PR01713 Nucleotide sugar epimerase signature 298 315 2.8E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NHAM_RS06645 a05a40038fd71b24e7e885a4dcc60339 339 PRINTS PR01713 Nucleotide sugar epimerase signature 259 274 2.8E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NHAM_RS06645 a05a40038fd71b24e7e885a4dcc60339 339 PRINTS PR01713 Nucleotide sugar epimerase signature 32 48 2.8E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 NHAM_RS06645 a05a40038fd71b24e7e885a4dcc60339 339 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 264 2.4E-54 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NHAM_RS06645 a05a40038fd71b24e7e885a4dcc60339 339 PANTHER PTHR10366 255 338 1.1E-166 T 22-04-2016 NHAM_RS06645 a05a40038fd71b24e7e885a4dcc60339 339 PANTHER PTHR10366 5 236 1.1E-166 T 22-04-2016 NHAM_RS06645 a05a40038fd71b24e7e885a4dcc60339 339 PANTHER PTHR10366:SF77 255 338 1.1E-166 T 22-04-2016 NHAM_RS06645 a05a40038fd71b24e7e885a4dcc60339 339 PANTHER PTHR10366:SF77 5 236 1.1E-166 T 22-04-2016 NHAM_RS06645 a05a40038fd71b24e7e885a4dcc60339 339 Gene3D G3DSA:3.40.50.720 5 186 8.4E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06645 a05a40038fd71b24e7e885a4dcc60339 339 Gene3D G3DSA:3.90.25.10 187 335 9.0E-27 T 22-04-2016 NHAM_RS06645 a05a40038fd71b24e7e885a4dcc60339 339 SUPERFAMILY SSF51735 5 336 3.78E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS08670 09605eff224d13f6caacbfdb3c67cdea 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 24 244 8.1E-78 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 NHAM_RS08670 09605eff224d13f6caacbfdb3c67cdea 252 PANTHER PTHR10291 18 248 4.5E-113 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 NHAM_RS08670 09605eff224d13f6caacbfdb3c67cdea 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 18 244 4.1E-79 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 NHAM_RS08670 09605eff224d13f6caacbfdb3c67cdea 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 190 207 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 NHAM_RS08670 09605eff224d13f6caacbfdb3c67cdea 252 Gene3D G3DSA:3.40.1180.10 12 249 9.1E-96 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 NHAM_RS08670 09605eff224d13f6caacbfdb3c67cdea 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 17 245 39.197 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 NHAM_RS08670 09605eff224d13f6caacbfdb3c67cdea 252 SUPERFAMILY SSF64005 14 240 1.57E-82 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 NHAM_RS15030 142b3899a35bdcbef73e6c3c076681d2 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 81 1.7E-25 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS15030 142b3899a35bdcbef73e6c3c076681d2 123 PANTHER PTHR30007 4 123 2.8E-31 T 22-04-2016 NHAM_RS15030 142b3899a35bdcbef73e6c3c076681d2 123 PANTHER PTHR30007:SF21 4 123 2.8E-31 T 22-04-2016 NHAM_RS15260 ae24a08aaafba112fb58071488e643d2 81 PIRSF PIRSF028770 2 80 1.2E-11 T 22-04-2016 IPR011223 Uncharacterised conserved protein UCP028770 NHAM_RS15260 ae24a08aaafba112fb58071488e643d2 81 Pfam PF11742 Protein of unknown function (DUF3302) 4 79 1.9E-32 T 22-04-2016 IPR011223 Uncharacterised conserved protein UCP028770 NHAM_RS13080 6390910503eb5e2d2cb3769d9647d6cf 357 Pfam PF16113 Enoyl-CoA hydratase/isomerase 20 346 6.9E-118 T 22-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 NHAM_RS13080 6390910503eb5e2d2cb3769d9647d6cf 357 Gene3D G3DSA:3.90.226.10 10 202 2.8E-50 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS13080 6390910503eb5e2d2cb3769d9647d6cf 357 PANTHER PTHR11941:SF53 251 329 1.3E-113 T 22-04-2016 NHAM_RS13080 6390910503eb5e2d2cb3769d9647d6cf 357 PANTHER PTHR11941:SF53 1 192 1.3E-113 T 22-04-2016 NHAM_RS13080 6390910503eb5e2d2cb3769d9647d6cf 357 Gene3D G3DSA:1.10.12.10 272 329 1.8E-6 T 22-04-2016 IPR014748 Crontonase, C-terminal NHAM_RS13080 6390910503eb5e2d2cb3769d9647d6cf 357 PANTHER PTHR11941 251 329 1.3E-113 T 22-04-2016 NHAM_RS13080 6390910503eb5e2d2cb3769d9647d6cf 357 PANTHER PTHR11941 1 192 1.3E-113 T 22-04-2016 NHAM_RS13080 6390910503eb5e2d2cb3769d9647d6cf 357 SUPERFAMILY SSF52096 11 192 1.14E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS13080 6390910503eb5e2d2cb3769d9647d6cf 357 SUPERFAMILY SSF52096 255 332 1.14E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS13430 3866f0762364772a2cc2843121f6496d 135 ProDom PD102069 BLL3070 ATU0920 MEMBRANE AGR_C_1676P PRECURSOR TRANSMEMBRANE R01001 MLL7648 SIGNAL 1 91 9.0E-25 T 22-04-2016 NHAM_RS11850 b75f197bdb26ed3db54ef7508aaec226 440 PANTHER PTHR30508 16 440 2.4E-119 T 22-04-2016 NHAM_RS11850 b75f197bdb26ed3db54ef7508aaec226 440 SUPERFAMILY SSF101960 23 436 2.62E-102 T 22-04-2016 NHAM_RS11850 b75f197bdb26ed3db54ef7508aaec226 440 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 153 426 1.5E-78 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 NHAM_RS11850 b75f197bdb26ed3db54ef7508aaec226 440 Pfam PF01458 Uncharacterized protein family (UPF0051) 187 411 6.1E-68 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 NHAM_RS11850 b75f197bdb26ed3db54ef7508aaec226 440 PANTHER PTHR30508:SF0 16 440 2.4E-119 T 22-04-2016 NHAM_RS22390 d39fe395f8b520f369689244006b06bd 78 SUPERFAMILY SSF55666 1 76 9.46E-20 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 NHAM_RS22390 d39fe395f8b520f369689244006b06bd 78 PANTHER PTHR11252 1 76 2.4E-42 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NHAM_RS22390 d39fe395f8b520f369689244006b06bd 78 Gene3D G3DSA:3.30.230.70 1 76 4.7E-21 T 22-04-2016 IPR027408 PNPase/RNase PH domain NHAM_RS22390 d39fe395f8b520f369689244006b06bd 78 PANTHER PTHR11252:SF0 1 76 2.4E-42 T 22-04-2016 NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 PANTHER PTHR30115:SF15 1 112 7.1E-77 T 22-04-2016 NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 PRINTS PR00340 P-II protein signature 23 41 6.9E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 PRINTS PR00340 P-II protein signature 2 17 6.9E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 PRINTS PR00340 P-II protein signature 83 103 6.9E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 PRINTS PR00340 P-II protein signature 52 75 6.9E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 PANTHER PTHR30115 1 112 7.1E-77 T 22-04-2016 NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 Gene3D G3DSA:3.30.70.120 1 112 2.1E-47 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.6E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 SMART SM00938 4 105 3.1E-66 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 PIRSF PIRSF039144 1 112 1.3E-52 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00425 20aba966ea3780d6c8f836426f2f2262 112 SUPERFAMILY SSF54913 1 112 5.08E-44 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta NHAM_RS17120 279de882b4c772d3111a7b7b50e769f5 108 PIRSF PIRSF030771 1 108 4.6E-19 T 22-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 NHAM_RS17120 279de882b4c772d3111a7b7b50e769f5 108 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 3 106 5.6E-41 T 22-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 PIRSF PIRSF001369 40 433 1.1E-164 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 Pfam PF00285 Citrate synthase, C-terminal domain 51 415 6.2E-133 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 PRINTS PR00143 Citrate synthase signature 383 397 9.2E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 PRINTS PR00143 Citrate synthase signature 363 379 9.2E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 PRINTS PR00143 Citrate synthase signature 244 272 9.2E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 PRINTS PR00143 Citrate synthase signature 299 319 9.2E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 PRINTS PR00143 Citrate synthase signature 168 181 9.2E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 PRINTS PR00143 Citrate synthase signature 222 237 9.2E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 Gene3D G3DSA:1.10.580.10 55 283 1.7E-97 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 Gene3D G3DSA:1.10.230.10 284 377 8.1E-40 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 SUPERFAMILY SSF48256 7 432 3.14E-165 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 426 5.2E-243 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 ProSitePatterns PS00480 Citrate synthase signature. 306 318 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 NHAM_RS08720 17a3dfaafb95b9a03bc9f8468cc46a3b 433 PANTHER PTHR11739 32 432 9.0E-201 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 NHAM_RS06860 092d74178ac606d5a5b75f4fade60dc2 110 Pfam PF10135 Rod binding protein 42 92 1.4E-11 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal NHAM_RS06440 695bbfd7dab484633f26e866515e58d6 53 SUPERFAMILY SSF48295 16 52 6.8E-7 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS06440 695bbfd7dab484633f26e866515e58d6 53 Gene3D G3DSA:1.10.10.10 16 52 3.1E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS11925 bd7b4db949f9bb762ab4fc189fcd84b1 389 PANTHER PTHR33529:SF2 1 387 1.9E-97 T 22-04-2016 NHAM_RS11925 bd7b4db949f9bb762ab4fc189fcd84b1 389 PANTHER PTHR33529 1 387 1.9E-97 T 22-04-2016 NHAM_RS11925 bd7b4db949f9bb762ab4fc189fcd84b1 389 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 355 1.2E-79 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 NHAM_RS11925 bd7b4db949f9bb762ab4fc189fcd84b1 389 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 350 6.7E-66 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 NHAM_RS01800 a945c63736382ddae2e109e6a9b0522b 362 PANTHER PTHR38591 38 362 9.0E-105 T 22-04-2016 NHAM_RS01800 a945c63736382ddae2e109e6a9b0522b 362 Pfam PF07143 CrtC N-terminal lipocalin domain 64 237 8.2E-58 T 22-04-2016 IPR010791 AttH domain NHAM_RS01800 a945c63736382ddae2e109e6a9b0522b 362 Gene3D G3DSA:2.40.370.10 52 239 1.4E-71 T 22-04-2016 IPR023374 AttH-like domain NHAM_RS01800 a945c63736382ddae2e109e6a9b0522b 362 Pfam PF17186 Lipocalin-like domain 240 362 7.6E-39 T 22-04-2016 IPR033451 AttH, lipocalin-like domain NHAM_RS01800 a945c63736382ddae2e109e6a9b0522b 362 SUPERFAMILY SSF159245 41 362 4.45E-106 T 22-04-2016 NHAM_RS01800 a945c63736382ddae2e109e6a9b0522b 362 Gene3D G3DSA:2.40.370.10 242 362 4.1E-38 T 22-04-2016 IPR023374 AttH-like domain NHAM_RS06420 f29adee6b23cfc7cca9a2aa2cdda34f0 258 SUPERFAMILY SSF56281 8 244 2.88E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS06420 f29adee6b23cfc7cca9a2aa2cdda34f0 258 Pfam PF12706 Beta-lactamase superfamily domain 24 218 5.5E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS06420 f29adee6b23cfc7cca9a2aa2cdda34f0 258 PANTHER PTHR15032 5 256 2.1E-22 T 22-04-2016 NHAM_RS06420 f29adee6b23cfc7cca9a2aa2cdda34f0 258 Gene3D G3DSA:3.60.15.10 4 256 3.3E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS04895 2aafee86a4ca27cda55f0dface811171 270 Pfam PF00005 ABC transporter 25 173 7.7E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS04895 2aafee86a4ca27cda55f0dface811171 270 SUPERFAMILY SSF52540 9 234 8.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04895 2aafee86a4ca27cda55f0dface811171 270 Gene3D G3DSA:3.40.50.300 8 235 7.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04895 2aafee86a4ca27cda55f0dface811171 270 PANTHER PTHR24220 11 268 3.4E-90 T 22-04-2016 NHAM_RS04895 2aafee86a4ca27cda55f0dface811171 270 PANTHER PTHR24220:SF582 11 268 3.4E-90 T 22-04-2016 NHAM_RS04895 2aafee86a4ca27cda55f0dface811171 270 SMART SM00382 34 229 9.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS18195 22f8311675e58afce913753de1535d19 173 Pfam PF07323 Protein of unknown function (DUF1465) 16 168 1.8E-60 T 22-04-2016 IPR010848 Protein of unknown function DUF1465 NHAM_RS12135 5eb3005d26f8177efa015d4a8480ef94 478 PANTHER PTHR35861 218 465 3.0E-33 T 22-04-2016 NHAM_RS12135 5eb3005d26f8177efa015d4a8480ef94 478 Pfam PF04984 Phage tail sheath protein 6 452 5.8E-29 T 22-04-2016 IPR007067 Tail sheath protein NHAM_RS12135 5eb3005d26f8177efa015d4a8480ef94 478 PANTHER PTHR35861:SF1 218 465 3.0E-33 T 22-04-2016 NHAM_RS04590 6ec88287bb67d9cf33243a637536ab69 275 Pfam PF13353 4Fe-4S single cluster domain 49 162 2.3E-16 T 22-04-2016 NHAM_RS04590 6ec88287bb67d9cf33243a637536ab69 275 Pfam PF04055 Radical SAM superfamily 58 208 9.4E-23 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NHAM_RS04590 6ec88287bb67d9cf33243a637536ab69 275 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 39 268 1.5E-80 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 NHAM_RS04590 6ec88287bb67d9cf33243a637536ab69 275 PANTHER PTHR30352:SF9 31 274 1.9E-76 T 22-04-2016 NHAM_RS04590 6ec88287bb67d9cf33243a637536ab69 275 PANTHER PTHR30352 31 274 1.9E-76 T 22-04-2016 NHAM_RS04590 6ec88287bb67d9cf33243a637536ab69 275 ProSitePatterns PS01087 Radical activating enzymes signature. 50 71 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 NHAM_RS04590 6ec88287bb67d9cf33243a637536ab69 275 SUPERFAMILY SSF102114 58 245 2.22E-26 T 22-04-2016 NHAM_RS04590 6ec88287bb67d9cf33243a637536ab69 275 Gene3D G3DSA:3.80.30.10 103 274 2.3E-55 T 22-04-2016 NHAM_RS08460 5c865c0b905542ec9cbae3f4f9413325 151 PANTHER PTHR10093 1 99 3.7E-13 T 22-04-2016 NHAM_RS08460 5c865c0b905542ec9cbae3f4f9413325 151 Pfam PF01592 NifU-like N terminal domain 6 123 5.2E-7 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 NHAM_RS08460 5c865c0b905542ec9cbae3f4f9413325 151 SUPERFAMILY SSF82649 1 142 4.19E-41 T 22-04-2016 NHAM_RS08460 5c865c0b905542ec9cbae3f4f9413325 151 Gene3D G3DSA:3.90.1010.10 5 143 4.2E-18 T 22-04-2016 NHAM_RS17895 b26e65ae3f5e1f9b1b4e59f3c008fb42 217 Gene3D G3DSA:1.10.340.30 43 151 1.0E-23 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NHAM_RS17895 b26e65ae3f5e1f9b1b4e59f3c008fb42 217 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 49 190 1.8E-7 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NHAM_RS17895 b26e65ae3f5e1f9b1b4e59f3c008fb42 217 SUPERFAMILY SSF48150 37 203 8.72E-34 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NHAM_RS17895 b26e65ae3f5e1f9b1b4e59f3c008fb42 217 PANTHER PTHR10242 8 204 8.1E-45 T 22-04-2016 NHAM_RS17895 b26e65ae3f5e1f9b1b4e59f3c008fb42 217 Gene3D G3DSA:1.10.1670.10 153 208 4.6E-13 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NHAM_RS17895 b26e65ae3f5e1f9b1b4e59f3c008fb42 217 SMART SM00478 52 203 2.3E-5 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 NHAM_RS12080 60b55f70cc14010d87693e28749a1b91 290 SUPERFAMILY SSF53335 98 285 1.08E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS12080 60b55f70cc14010d87693e28749a1b91 290 PANTHER PTHR10108 105 255 5.0E-18 T 22-04-2016 NHAM_RS12080 60b55f70cc14010d87693e28749a1b91 290 Gene3D G3DSA:3.40.50.150 98 215 1.1E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS12080 60b55f70cc14010d87693e28749a1b91 290 Pfam PF13649 Methyltransferase domain 118 209 8.4E-12 T 22-04-2016 NHAM_RS02495 468ea9dd3266c47ecf97dccfc76d04d5 150 Pfam PF00293 NUDIX domain 21 143 7.9E-20 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NHAM_RS02495 468ea9dd3266c47ecf97dccfc76d04d5 150 PANTHER PTHR22769 23 146 7.6E-32 T 22-04-2016 NHAM_RS02495 468ea9dd3266c47ecf97dccfc76d04d5 150 PANTHER PTHR22769:SF35 23 146 7.6E-32 T 22-04-2016 NHAM_RS02495 468ea9dd3266c47ecf97dccfc76d04d5 150 PRINTS PR00502 NUDIX hydrolase family signature 50 64 4.0E-8 T 22-04-2016 IPR020476 NUDIX hydrolase NHAM_RS02495 468ea9dd3266c47ecf97dccfc76d04d5 150 PRINTS PR00502 NUDIX hydrolase family signature 64 79 4.0E-8 T 22-04-2016 IPR020476 NUDIX hydrolase NHAM_RS02495 468ea9dd3266c47ecf97dccfc76d04d5 150 ProSitePatterns PS00893 Nudix box signature. 55 76 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NHAM_RS02495 468ea9dd3266c47ecf97dccfc76d04d5 150 SUPERFAMILY SSF55811 10 145 3.52E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS02495 468ea9dd3266c47ecf97dccfc76d04d5 150 Gene3D G3DSA:3.90.79.10 22 143 1.6E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS12470 5f0a6d18cd3fbf455c545b6b7c783cb6 121 Gene3D G3DSA:3.40.50.2300 3 120 2.2E-37 T 22-04-2016 NHAM_RS12470 5f0a6d18cd3fbf455c545b6b7c783cb6 121 PANTHER PTHR24423 3 120 4.5E-38 T 22-04-2016 NHAM_RS12470 5f0a6d18cd3fbf455c545b6b7c783cb6 121 Pfam PF00072 Response regulator receiver domain 5 116 6.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS12470 5f0a6d18cd3fbf455c545b6b7c783cb6 121 SUPERFAMILY SSF52172 3 120 6.55E-36 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS12470 5f0a6d18cd3fbf455c545b6b7c783cb6 121 SMART SM00448 3 116 3.6E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS12985 aebb7adeb4b0f1d7e555d93c344383cd 136 Pfam PF00571 CBS domain 63 116 3.9E-4 T 22-04-2016 IPR000644 CBS domain NHAM_RS12985 aebb7adeb4b0f1d7e555d93c344383cd 136 Gene3D G3DSA:3.10.580.10 14 112 1.1E-18 T 22-04-2016 NHAM_RS12985 aebb7adeb4b0f1d7e555d93c344383cd 136 SUPERFAMILY SSF54631 14 129 1.04E-18 T 22-04-2016 NHAM_RS01265 a94bb74278e663643322e07633680eae 179 Pfam PF14295 PAN domain 24 74 3.6E-16 T 22-04-2016 IPR003609 PAN/Apple domain NHAM_RS01265 a94bb74278e663643322e07633680eae 179 Pfam PF14295 PAN domain 107 161 1.4E-15 T 22-04-2016 IPR003609 PAN/Apple domain NHAM_RS01265 a94bb74278e663643322e07633680eae 179 SUPERFAMILY SSF57414 102 177 9.22E-7 T 22-04-2016 NHAM_RS01265 a94bb74278e663643322e07633680eae 179 Gene3D G3DSA:3.50.4.10 109 177 3.4E-12 T 22-04-2016 NHAM_RS01265 a94bb74278e663643322e07633680eae 179 Gene3D G3DSA:3.50.4.10 19 91 9.8E-10 T 22-04-2016 NHAM_RS02345 a032d9cbe51bd85c5591b819b1ba6fd4 211 PANTHER PTHR30086 4 207 1.7E-51 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NHAM_RS02345 a032d9cbe51bd85c5591b819b1ba6fd4 211 PANTHER PTHR30086:SF7 4 207 1.7E-51 T 22-04-2016 NHAM_RS02345 a032d9cbe51bd85c5591b819b1ba6fd4 211 Pfam PF01810 LysE type translocator 18 208 2.2E-34 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NHAM_RS02345 a032d9cbe51bd85c5591b819b1ba6fd4 211 PIRSF PIRSF006324 5 210 1.6E-48 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 SUPERFAMILY SSF51905 27 197 2.59E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 SUPERFAMILY SSF51905 287 399 2.59E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 Gene3D G3DSA:3.50.50.60 25 187 1.0E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 Gene3D G3DSA:3.50.50.60 298 337 1.0E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 315 8.22E-37 T 22-04-2016 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 315 331 8.22E-37 T 22-04-2016 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 351 367 8.22E-37 T 22-04-2016 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 28 50 8.22E-37 T 22-04-2016 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 333 351 8.22E-37 T 22-04-2016 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 176 191 8.22E-37 T 22-04-2016 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 PANTHER PTHR13789:SF219 4 443 2.0E-211 T 22-04-2016 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 PANTHER PTHR13789 4 443 2.0E-211 T 22-04-2016 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 Pfam PF01494 FAD binding domain 28 364 1.9E-61 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 Gene3D G3DSA:3.30.9.10 348 387 3.4E-13 T 22-04-2016 NHAM_RS04755 85e25999f03a1c6ab6d110f0cf9e7866 541 Gene3D G3DSA:3.30.9.10 188 293 3.4E-13 T 22-04-2016 NHAM_RS07105 bb3f6b170ab6c3a8ca5b76298a45afe8 135 PIRSF PIRSF002889 2 134 1.1E-17 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 NHAM_RS07105 bb3f6b170ab6c3a8ca5b76298a45afe8 135 PANTHER PTHR30435:SF12 3 132 1.6E-24 T 22-04-2016 NHAM_RS07105 bb3f6b170ab6c3a8ca5b76298a45afe8 135 PANTHER PTHR30435 3 132 1.6E-24 T 22-04-2016 NHAM_RS07105 bb3f6b170ab6c3a8ca5b76298a45afe8 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site NHAM_RS07105 bb3f6b170ab6c3a8ca5b76298a45afe8 135 Pfam PF00460 Flagella basal body rod protein 13 39 1.3E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 NHAM_RS02540 7066fdbab11da03daccc4cc5cd6fdbbf 383 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 22 371 3.5E-107 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 NHAM_RS02540 7066fdbab11da03daccc4cc5cd6fdbbf 383 Pfam PF01761 3-dehydroquinate synthase 77 343 1.2E-100 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 NHAM_RS02540 7066fdbab11da03daccc4cc5cd6fdbbf 383 PANTHER PTHR21090 3 376 2.5E-165 T 22-04-2016 NHAM_RS02540 7066fdbab11da03daccc4cc5cd6fdbbf 383 SUPERFAMILY SSF56796 13 374 2.75E-109 T 22-04-2016 NHAM_RS02540 7066fdbab11da03daccc4cc5cd6fdbbf 383 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 11 376 40.343 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 NHAM_RS02540 7066fdbab11da03daccc4cc5cd6fdbbf 383 Gene3D G3DSA:1.20.1090.10 183 374 4.0E-66 T 22-04-2016 NHAM_RS02540 7066fdbab11da03daccc4cc5cd6fdbbf 383 Gene3D G3DSA:3.40.50.1970 13 182 2.4E-62 T 22-04-2016 NHAM_RS02540 7066fdbab11da03daccc4cc5cd6fdbbf 383 PIRSF PIRSF001455 12 379 1.3E-100 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 NHAM_RS18840 ee2df3c6489792974e471e9c3f66223b 275 PIRSF PIRSF038455 1 275 3.2E-85 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 NHAM_RS18840 ee2df3c6489792974e471e9c3f66223b 275 SUPERFAMILY SSF46626 164 275 2.83E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS18840 ee2df3c6489792974e471e9c3f66223b 275 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 68 274 8.7E-70 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 NHAM_RS18840 ee2df3c6489792974e471e9c3f66223b 275 SUPERFAMILY SSF46626 58 159 4.26E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS18840 ee2df3c6489792974e471e9c3f66223b 275 Gene3D G3DSA:1.10.760.10 97 274 1.6E-52 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS21805 5be555869162c3bfedd93a4474082ee5 96 Gene3D G3DSA:1.20.1250.20 8 64 1.5E-8 T 22-04-2016 NHAM_RS21805 5be555869162c3bfedd93a4474082ee5 96 SUPERFAMILY SSF103473 3 72 2.22E-9 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS11215 faf0012d160f5d333b42a5ea1428dc9b 134 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 4 133 1.2E-45 T 22-04-2016 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384 NHAM_RS11215 faf0012d160f5d333b42a5ea1428dc9b 134 PANTHER PTHR21366 1 134 6.8E-57 T 22-04-2016 NHAM_RS11215 faf0012d160f5d333b42a5ea1428dc9b 134 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 118 3.1E-19 T 22-04-2016 NHAM_RS11215 faf0012d160f5d333b42a5ea1428dc9b 134 SUPERFAMILY SSF54593 1 133 6.44E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS11215 faf0012d160f5d333b42a5ea1428dc9b 134 Gene3D G3DSA:3.10.180.10 1 133 4.2E-41 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS11215 faf0012d160f5d333b42a5ea1428dc9b 134 PANTHER PTHR21366:SF9 1 134 6.8E-57 T 22-04-2016 NHAM_RS07065 8e484bfc066488d879316179d5c6018f 255 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 7 229 6.2E-63 T 22-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 NHAM_RS07065 8e484bfc066488d879316179d5c6018f 255 PANTHER PTHR30435:SF18 1 251 1.9E-76 T 22-04-2016 NHAM_RS07065 8e484bfc066488d879316179d5c6018f 255 SUPERFAMILY SSF117143 84 211 1.31E-23 T 22-04-2016 NHAM_RS07065 8e484bfc066488d879316179d5c6018f 255 Gene3D G3DSA:2.160.20.20 17 171 1.2E-4 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like NHAM_RS07065 8e484bfc066488d879316179d5c6018f 255 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 127 4.3E-40 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G NHAM_RS07065 8e484bfc066488d879316179d5c6018f 255 Pfam PF00460 Flagella basal body rod protein 5 35 9.7E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 NHAM_RS07065 8e484bfc066488d879316179d5c6018f 255 PANTHER PTHR30435 1 251 1.9E-76 T 22-04-2016 NHAM_RS07065 8e484bfc066488d879316179d5c6018f 255 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 178 247 2.1E-16 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NHAM_RS00925 8ca678e7c09eb28a1c6dc8b4e331ba4e 268 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 3 264 17.232 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 NHAM_RS00925 8ca678e7c09eb28a1c6dc8b4e331ba4e 268 Pfam PF02673 Bacitracin resistance protein BacA 8 258 3.5E-76 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 NHAM_RS00925 8ca678e7c09eb28a1c6dc8b4e331ba4e 268 PANTHER PTHR30622:SF3 1 268 9.9E-120 T 22-04-2016 NHAM_RS00925 8ca678e7c09eb28a1c6dc8b4e331ba4e 268 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 8 257 9.1E-73 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 NHAM_RS00925 8ca678e7c09eb28a1c6dc8b4e331ba4e 268 PANTHER PTHR30622 1 268 9.9E-120 T 22-04-2016 NHAM_RS02580 4cf902451f2685f2b3444e3ea9fb5400 332 TIGRFAM TIGR01650 PD_CobS: cobaltochelatase, CobS subunit 13 329 1.6E-194 T 22-04-2016 IPR006537 Cobaltochelatase subunit CobS KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 NHAM_RS02580 4cf902451f2685f2b3444e3ea9fb5400 332 SUPERFAMILY SSF52540 47 293 5.85E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02580 4cf902451f2685f2b3444e3ea9fb5400 332 Pfam PF07728 AAA domain (dynein-related subfamily) 71 195 1.9E-11 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 NHAM_RS02580 4cf902451f2685f2b3444e3ea9fb5400 332 Gene3D G3DSA:3.40.50.300 61 233 7.3E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02580 4cf902451f2685f2b3444e3ea9fb5400 332 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 242 295 1.0E-4 T 22-04-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal NHAM_RS02580 4cf902451f2685f2b3444e3ea9fb5400 332 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 11 44 3.3E-19 T 22-04-2016 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 NHAM_RS05530 cfcfc3d2000410f6611e8bdf054097b4 758 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 302 449 1.4E-17 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS05530 cfcfc3d2000410f6611e8bdf054097b4 758 SUPERFAMILY SSF56645 62 297 5.5E-45 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NHAM_RS05530 cfcfc3d2000410f6611e8bdf054097b4 758 Gene3D G3DSA:1.20.140.10 292 449 4.0E-29 T 22-04-2016 NHAM_RS05530 cfcfc3d2000410f6611e8bdf054097b4 758 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 179 270 1.1E-8 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NHAM_RS05530 cfcfc3d2000410f6611e8bdf054097b4 758 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 88 174 4.3E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NHAM_RS05530 cfcfc3d2000410f6611e8bdf054097b4 758 Gene3D G3DSA:1.10.540.10 37 175 6.9E-27 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NHAM_RS05530 cfcfc3d2000410f6611e8bdf054097b4 758 SUPERFAMILY SSF47203 302 449 2.42E-27 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NHAM_RS05530 cfcfc3d2000410f6611e8bdf054097b4 758 PANTHER PTHR10909 1 475 1.7E-231 T 22-04-2016 NHAM_RS05530 cfcfc3d2000410f6611e8bdf054097b4 758 Gene3D G3DSA:2.40.110.10 179 291 4.0E-16 T 22-04-2016 NHAM_RS05530 cfcfc3d2000410f6611e8bdf054097b4 758 Pfam PF09317 Domain of unknown function (DUF1974) 456 729 3.9E-96 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 NHAM_RS05530 cfcfc3d2000410f6611e8bdf054097b4 758 PANTHER PTHR10909:SF283 1 475 1.7E-231 T 22-04-2016 NHAM_RS19685 3d835981a9045164670af1e2e4191cc2 636 Gene3D G3DSA:3.40.50.300 410 594 6.6E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS19685 3d835981a9045164670af1e2e4191cc2 636 Pfam PF01580 FtsK/SpoIIIE family 402 588 1.1E-10 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 NHAM_RS19685 3d835981a9045164670af1e2e4191cc2 636 PANTHER PTHR22683 398 593 5.4E-18 T 22-04-2016 NHAM_RS19685 3d835981a9045164670af1e2e4191cc2 636 SMART SM00382 411 578 0.0039 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS19685 3d835981a9045164670af1e2e4191cc2 636 SUPERFAMILY SSF52540 386 592 7.44E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS20285 91a7f565a18dd9b88c8f04c9fee3e8e4 274 Gene3D G3DSA:2.130.10.10 9 255 2.7E-26 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NHAM_RS20285 91a7f565a18dd9b88c8f04c9fee3e8e4 274 Pfam PF10282 Lactonase, 7-bladed beta-propeller 18 124 1.0E-8 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 NHAM_RS20285 91a7f565a18dd9b88c8f04c9fee3e8e4 274 SUPERFAMILY SSF51004 9 255 6.8E-28 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain NHAM_RS03870 f218cbabc933cd4564762cf5e17f3f7d 337 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 102 313 1.3E-93 T 22-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 NHAM_RS03870 f218cbabc933cd4564762cf5e17f3f7d 337 Pfam PF01618 MotA/TolQ/ExbB proton channel family 188 295 3.5E-32 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NHAM_RS03870 f218cbabc933cd4564762cf5e17f3f7d 337 PANTHER PTHR30572:SF11 94 333 2.6E-54 T 22-04-2016 NHAM_RS03870 f218cbabc933cd4564762cf5e17f3f7d 337 PANTHER PTHR30572 94 333 2.6E-54 T 22-04-2016 NHAM_RS19600 198e00b974e892cfd75a3e13e3176d0b 219 PANTHER PTHR11465:SF7 1 183 7.9E-128 T 22-04-2016 NHAM_RS19600 198e00b974e892cfd75a3e13e3176d0b 219 SUPERFAMILY SSF56634 1 183 8.64E-87 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS19600 198e00b974e892cfd75a3e13e3176d0b 219 SMART SM01060 1 219 2.0E-47 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS19600 198e00b974e892cfd75a3e13e3176d0b 219 Gene3D G3DSA:2.40.180.10 1 185 6.0E-87 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS19600 198e00b974e892cfd75a3e13e3176d0b 219 Pfam PF00199 Catalase 1 184 1.3E-81 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS19600 198e00b974e892cfd75a3e13e3176d0b 219 PANTHER PTHR11465 1 183 7.9E-128 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 NHAM_RS07775 7527d3d0dab84545257d842cb2f31dc8 227 PANTHER PTHR22939:SF104 35 221 2.2E-35 T 22-04-2016 NHAM_RS07775 7527d3d0dab84545257d842cb2f31dc8 227 PANTHER PTHR22939 35 221 2.2E-35 T 22-04-2016 NHAM_RS08115 48d7eddd34ee87522bc4a547d1828ed0 325 Gene3D G3DSA:3.40.47.10 5 163 4.0E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS08115 48d7eddd34ee87522bc4a547d1828ed0 325 PANTHER PTHR18919:SF109 29 325 8.7E-139 T 22-04-2016 NHAM_RS08115 48d7eddd34ee87522bc4a547d1828ed0 325 PANTHER PTHR18919 29 325 8.7E-139 T 22-04-2016 NHAM_RS08115 48d7eddd34ee87522bc4a547d1828ed0 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 237 325 5.9E-38 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 NHAM_RS08115 48d7eddd34ee87522bc4a547d1828ed0 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 192 7.9E-35 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 NHAM_RS08115 48d7eddd34ee87522bc4a547d1828ed0 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 325 5.6E-125 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 NHAM_RS08115 48d7eddd34ee87522bc4a547d1828ed0 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 325 72.495 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 NHAM_RS08115 48d7eddd34ee87522bc4a547d1828ed0 325 Gene3D G3DSA:3.40.47.10 164 325 5.7E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS08115 48d7eddd34ee87522bc4a547d1828ed0 325 SUPERFAMILY SSF53901 9 325 4.93E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS06250 0d88d20d9530870c6ec9c29d67ff138c 775 Gene3D G3DSA:2.40.440.10 581 630 5.2E-7 T 22-04-2016 NHAM_RS06250 0d88d20d9530870c6ec9c29d67ff138c 775 Gene3D G3DSA:2.40.440.10 487 533 5.2E-7 T 22-04-2016 NHAM_RS06250 0d88d20d9530870c6ec9c29d67ff138c 775 Pfam PF01471 Putative peptidoglycan binding domain 411 454 1.0E-9 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS06250 0d88d20d9530870c6ec9c29d67ff138c 775 Pfam PF03734 L,D-transpeptidase catalytic domain 488 635 4.4E-26 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NHAM_RS06250 0d88d20d9530870c6ec9c29d67ff138c 775 SUPERFAMILY SSF141523 485 542 1.96E-16 T 22-04-2016 NHAM_RS06250 0d88d20d9530870c6ec9c29d67ff138c 775 SUPERFAMILY SSF141523 579 630 1.96E-16 T 22-04-2016 NHAM_RS06250 0d88d20d9530870c6ec9c29d67ff138c 775 PANTHER PTHR41533:SF1 148 723 2.2E-134 T 22-04-2016 NHAM_RS06250 0d88d20d9530870c6ec9c29d67ff138c 775 SUPERFAMILY SSF47090 402 455 5.89E-9 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS06250 0d88d20d9530870c6ec9c29d67ff138c 775 PANTHER PTHR41533 148 723 2.2E-134 T 22-04-2016 NHAM_RS06250 0d88d20d9530870c6ec9c29d67ff138c 775 Gene3D G3DSA:1.10.101.10 401 456 2.1E-11 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS06890 8402c63049b382b5b3b7752ed9e534b8 241 Gene3D G3DSA:3.40.50.150 25 203 1.9E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS06890 8402c63049b382b5b3b7752ed9e534b8 241 SUPERFAMILY SSF53335 101 208 1.64E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS15320 b831a6eab5078d71b93ebce396117865 198 PANTHER PTHR41878:SF1 2 195 2.1E-41 T 22-04-2016 NHAM_RS15320 b831a6eab5078d71b93ebce396117865 198 Gene3D G3DSA:3.10.290.30 3 176 1.9E-55 T 22-04-2016 IPR024047 Protein MM3350-like domain NHAM_RS15320 b831a6eab5078d71b93ebce396117865 198 SUPERFAMILY SSF159941 5 176 7.32E-56 T 22-04-2016 IPR024047 Protein MM3350-like domain NHAM_RS15320 b831a6eab5078d71b93ebce396117865 198 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 6 174 1.2E-56 T 22-04-2016 IPR012912 Plasmid pRiA4b, Orf3 NHAM_RS15320 b831a6eab5078d71b93ebce396117865 198 PANTHER PTHR41878 2 195 2.1E-41 T 22-04-2016 NHAM_RS24220 e4dc7b5dda461b6ac1e3310fe31e58ef 173 SUPERFAMILY SSF56317 26 163 9.16E-18 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NHAM_RS24220 e4dc7b5dda461b6ac1e3310fe31e58ef 173 Pfam PF00795 Carbon-nitrogen hydrolase 48 162 8.4E-7 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NHAM_RS24220 e4dc7b5dda461b6ac1e3310fe31e58ef 173 Gene3D G3DSA:3.60.110.10 23 166 1.8E-12 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NHAM_RS24220 e4dc7b5dda461b6ac1e3310fe31e58ef 173 PANTHER PTHR23088:SF29 15 173 2.4E-23 T 22-04-2016 NHAM_RS24220 e4dc7b5dda461b6ac1e3310fe31e58ef 173 PANTHER PTHR23088 15 173 2.4E-23 T 22-04-2016 NHAM_RS08925 79b20f7166d6378f52e0288094369b1d 194 PANTHER PTHR12714 17 194 5.2E-24 T 22-04-2016 NHAM_RS08925 79b20f7166d6378f52e0288094369b1d 194 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 96 173 5.7E-16 T 22-04-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 NHAM_RS05570 da4708378b1ce804047e342bca645a06 434 PANTHER PTHR30163 16 423 4.8E-164 T 22-04-2016 IPR011757 Lytic transglycosylase MltB NHAM_RS05570 da4708378b1ce804047e342bca645a06 434 SUPERFAMILY SSF47090 353 412 1.18E-13 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS05570 da4708378b1ce804047e342bca645a06 434 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 37 338 2.3E-108 T 22-04-2016 IPR011970 Lytic murein transglycosylase NHAM_RS05570 da4708378b1ce804047e342bca645a06 434 Pfam PF13406 Transglycosylase SLT domain 38 333 5.9E-90 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 NHAM_RS05570 da4708378b1ce804047e342bca645a06 434 Gene3D G3DSA:1.10.530.10 86 138 8.7E-46 T 22-04-2016 NHAM_RS05570 da4708378b1ce804047e342bca645a06 434 Gene3D G3DSA:1.10.530.10 219 340 8.7E-46 T 22-04-2016 NHAM_RS05570 da4708378b1ce804047e342bca645a06 434 Pfam PF01471 Putative peptidoglycan binding domain 356 409 4.7E-11 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS05570 da4708378b1ce804047e342bca645a06 434 PANTHER PTHR30163:SF2 16 423 4.8E-164 T 22-04-2016 NHAM_RS05570 da4708378b1ce804047e342bca645a06 434 Gene3D G3DSA:1.10.101.10 356 410 1.0E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS05570 da4708378b1ce804047e342bca645a06 434 SUPERFAMILY SSF53955 31 340 2.81E-85 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS17670 7c33863c8794dd16d90feb01c3fd48c3 417 PANTHER PTHR23515 15 392 8.4E-31 T 22-04-2016 NHAM_RS17670 7c33863c8794dd16d90feb01c3fd48c3 417 Gene3D G3DSA:1.20.1250.20 225 396 1.7E-6 T 22-04-2016 NHAM_RS17670 7c33863c8794dd16d90feb01c3fd48c3 417 Gene3D G3DSA:1.20.1250.20 19 209 3.0E-23 T 22-04-2016 NHAM_RS17670 7c33863c8794dd16d90feb01c3fd48c3 417 Pfam PF07690 Major Facilitator Superfamily 27 361 2.0E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS17670 7c33863c8794dd16d90feb01c3fd48c3 417 SUPERFAMILY SSF103473 18 397 9.81E-45 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS12715 c30b22a112e25bd656fe0c87d66f7202 390 SUPERFAMILY SSF56563 105 388 6.54E-67 T 22-04-2016 NHAM_RS12715 c30b22a112e25bd656fe0c87d66f7202 390 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 12 387 7.4E-103 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 NHAM_RS12715 c30b22a112e25bd656fe0c87d66f7202 390 Pfam PF05065 Phage capsid family 112 387 1.4E-78 T 22-04-2016 IPR024455 Phage capsid NHAM_RS00165 fd293c26ebc7049a3f65161822175860 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-39 T 22-04-2016 NHAM_RS00165 fd293c26ebc7049a3f65161822175860 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.328 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 NHAM_RS00165 fd293c26ebc7049a3f65161822175860 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 3.1E-33 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 NHAM_RS00165 fd293c26ebc7049a3f65161822175860 89 Gene3D G3DSA:1.10.287.10 3 89 3.5E-35 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 NHAM_RS00165 fd293c26ebc7049a3f65161822175860 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS00165 fd293c26ebc7049a3f65161822175860 89 Pfam PF00312 Ribosomal protein S15 8 88 1.1E-33 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS00165 fd293c26ebc7049a3f65161822175860 89 SUPERFAMILY SSF47060 3 89 2.09E-31 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 NHAM_RS00165 fd293c26ebc7049a3f65161822175860 89 PANTHER PTHR23321 1 89 8.1E-37 T 22-04-2016 NHAM_RS00165 fd293c26ebc7049a3f65161822175860 89 SMART SM01387 8 88 4.2E-46 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS02480 041b4c41e7911235eb45d821659fe212 293 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 155 175 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site NHAM_RS02480 041b4c41e7911235eb45d821659fe212 293 PANTHER PTHR23088:SF27 1 283 3.4E-106 T 22-04-2016 NHAM_RS02480 041b4c41e7911235eb45d821659fe212 293 Gene3D G3DSA:3.60.110.10 3 272 4.8E-82 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NHAM_RS02480 041b4c41e7911235eb45d821659fe212 293 PANTHER PTHR23088 1 283 3.4E-106 T 22-04-2016 NHAM_RS02480 041b4c41e7911235eb45d821659fe212 293 Pfam PF00795 Carbon-nitrogen hydrolase 9 262 3.6E-52 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NHAM_RS02480 041b4c41e7911235eb45d821659fe212 293 SUPERFAMILY SSF56317 5 270 7.85E-80 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NHAM_RS13720 1d4c1c3ea81182ced98c70a097e50486 215 PANTHER PTHR36919 22 154 2.1E-44 T 22-04-2016 NHAM_RS13720 1d4c1c3ea81182ced98c70a097e50486 215 PANTHER PTHR36919:SF2 22 154 2.1E-44 T 22-04-2016 NHAM_RS13720 1d4c1c3ea81182ced98c70a097e50486 215 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 135 8.6E-25 T 22-04-2016 IPR019223 Domain of unknown function DUF2147 NHAM_RS03015 4391fb01a84658139c2997c181f5b353 101 PANTHER PTHR36924:SF1 1 88 4.8E-31 T 22-04-2016 NHAM_RS03015 4391fb01a84658139c2997c181f5b353 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 5 79 4.0E-27 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 NHAM_RS03015 4391fb01a84658139c2997c181f5b353 101 PANTHER PTHR36924 1 88 4.8E-31 T 22-04-2016 NHAM_RS03015 4391fb01a84658139c2997c181f5b353 101 Gene3D G3DSA:1.10.260.40 3 80 2.6E-31 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS03015 4391fb01a84658139c2997c181f5b353 101 SMART SM00530 11 66 1.4E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS03015 4391fb01a84658139c2997c181f5b353 101 Pfam PF01381 Helix-turn-helix 14 55 1.8E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS03015 4391fb01a84658139c2997c181f5b353 101 SUPERFAMILY SSF47413 7 88 3.1E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS18935 04b33345e0eca9628c8ab9d8aa8060d4 454 Pfam PF07690 Major Facilitator Superfamily 38 406 3.3E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS18935 04b33345e0eca9628c8ab9d8aa8060d4 454 SUPERFAMILY SSF103473 34 446 9.29E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS18935 04b33345e0eca9628c8ab9d8aa8060d4 454 Gene3D G3DSA:1.20.1250.20 263 448 7.4E-12 T 22-04-2016 NHAM_RS18935 04b33345e0eca9628c8ab9d8aa8060d4 454 Gene3D G3DSA:1.20.1250.20 31 237 5.6E-12 T 22-04-2016 NHAM_RS18935 04b33345e0eca9628c8ab9d8aa8060d4 454 PANTHER PTHR12778 31 447 7.5E-107 T 22-04-2016 NHAM_RS15195 5057eb532e7bfd4781c96a939921d218 112 SUPERFAMILY SSF50022 1 105 5.37E-29 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS15195 5057eb532e7bfd4781c96a939921d218 112 Gene3D G3DSA:2.102.10.10 2 105 4.6E-26 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS15195 5057eb532e7bfd4781c96a939921d218 112 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 103 2.8E-22 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 NHAM_RS15195 5057eb532e7bfd4781c96a939921d218 112 Pfam PF00355 Rieske [2Fe-2S] domain 4 82 1.4E-13 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NHAM_RS15195 5057eb532e7bfd4781c96a939921d218 112 PANTHER PTHR21496 18 108 6.4E-17 T 22-04-2016 NHAM_RS13130 0cb8f21eede1916b921825f61b847ed4 312 Pfam PF04280 Tim44-like domain 188 311 1.6E-30 T 22-04-2016 IPR007379 Tim44-like domain NHAM_RS13130 0cb8f21eede1916b921825f61b847ed4 312 PANTHER PTHR41542 6 312 1.9E-65 T 22-04-2016 NHAM_RS13130 0cb8f21eede1916b921825f61b847ed4 312 SMART SM00978 168 311 3.1E-44 T 22-04-2016 IPR007379 Tim44-like domain NHAM_RS13130 0cb8f21eede1916b921825f61b847ed4 312 PANTHER PTHR41542:SF1 6 312 1.9E-65 T 22-04-2016 NHAM_RS13130 0cb8f21eede1916b921825f61b847ed4 312 SUPERFAMILY SSF54427 192 311 8.14E-21 T 22-04-2016 IPR032710 NTF2-like domain NHAM_RS16290 63cf83d86c9bb19a4a488aa48cbef722 335 SUPERFAMILY SSF52540 43 183 6.88E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16290 63cf83d86c9bb19a4a488aa48cbef722 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 15 327 6.5E-94 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 NHAM_RS16290 63cf83d86c9bb19a4a488aa48cbef722 335 PANTHER PTHR30160 7 332 2.6E-69 T 22-04-2016 NHAM_RS16290 63cf83d86c9bb19a4a488aa48cbef722 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 335 34.898 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 NHAM_RS16290 63cf83d86c9bb19a4a488aa48cbef722 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 17 299 1.7E-63 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 NHAM_RS16290 63cf83d86c9bb19a4a488aa48cbef722 335 PANTHER PTHR30160:SF13 7 332 2.6E-69 T 22-04-2016 NHAM_RS08340 b66ae754105e9ca076a9c6d8243aefd3 108 Pfam PF07345 Domain of unknown function (DUF1476) 2 103 8.4E-41 T 22-04-2016 IPR009945 Protein of unknown function DUF1476 NHAM_RS08340 b66ae754105e9ca076a9c6d8243aefd3 108 PIRSF PIRSF031780 1 108 7.9E-46 T 22-04-2016 IPR009945 Protein of unknown function DUF1476 NHAM_RS03480 aee59d00635e7a575844ddce7b41fac1 238 PANTHER PTHR30336:SF1 15 227 3.9E-35 T 22-04-2016 NHAM_RS03480 aee59d00635e7a575844ddce7b41fac1 238 PANTHER PTHR30336 15 227 3.9E-35 T 22-04-2016 NHAM_RS03480 aee59d00635e7a575844ddce7b41fac1 238 ProDom PD207074 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED RC1356 RP875 58 208 4.0E-6 T 22-04-2016 NHAM_RS03480 aee59d00635e7a575844ddce7b41fac1 238 Gene3D G3DSA:3.40.50.620 58 169 2.4E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS03480 aee59d00635e7a575844ddce7b41fac1 238 Pfam PF02698 DUF218 domain 62 201 9.6E-13 T 22-04-2016 IPR003848 Domain of unknown function DUF218 NHAM_RS00050 f002e123e37f6469818820876bd3bed4 333 PANTHER PTHR10584:SF153 1 324 7.4E-113 T 22-04-2016 NHAM_RS00050 f002e123e37f6469818820876bd3bed4 333 Pfam PF00294 pfkB family carbohydrate kinase 59 318 3.3E-49 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB NHAM_RS00050 f002e123e37f6469818820876bd3bed4 333 SUPERFAMILY SSF53613 5 319 9.51E-79 T 22-04-2016 IPR029056 Ribokinase-like NHAM_RS00050 f002e123e37f6469818820876bd3bed4 333 Gene3D G3DSA:3.40.1190.20 5 327 8.3E-74 T 22-04-2016 IPR029056 Ribokinase-like NHAM_RS00050 f002e123e37f6469818820876bd3bed4 333 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 274 287 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 NHAM_RS00050 f002e123e37f6469818820876bd3bed4 333 PANTHER PTHR10584 1 324 7.4E-113 T 22-04-2016 NHAM_RS22140 519d962d74719a97f46e6962aaabb83e 108 PANTHER PTHR33164:SF4 13 107 6.1E-21 T 22-04-2016 NHAM_RS22140 519d962d74719a97f46e6962aaabb83e 108 Pfam PF12802 MarR family 40 101 2.7E-11 T 22-04-2016 NHAM_RS22140 519d962d74719a97f46e6962aaabb83e 108 Gene3D G3DSA:1.10.10.10 7 108 8.9E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS22140 519d962d74719a97f46e6962aaabb83e 108 PANTHER PTHR33164 13 107 6.1E-21 T 22-04-2016 NHAM_RS22140 519d962d74719a97f46e6962aaabb83e 108 SUPERFAMILY SSF46785 14 108 5.81E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS08905 03d85bbc5a9bac89d4c4f84bc1d7a6bb 158 Pfam PF14489 QueF-like protein 62 139 6.6E-32 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS08905 03d85bbc5a9bac89d4c4f84bc1d7a6bb 158 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 28 136 1.6E-41 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS08905 03d85bbc5a9bac89d4c4f84bc1d7a6bb 158 PANTHER PTHR34354:SF1 15 151 1.5E-51 T 22-04-2016 NHAM_RS08905 03d85bbc5a9bac89d4c4f84bc1d7a6bb 158 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 158 67.143 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 NHAM_RS08905 03d85bbc5a9bac89d4c4f84bc1d7a6bb 158 PANTHER PTHR34354 15 151 1.5E-51 T 22-04-2016 NHAM_RS08905 03d85bbc5a9bac89d4c4f84bc1d7a6bb 158 Gene3D G3DSA:3.30.1130.10 23 142 5.2E-44 T 22-04-2016 NHAM_RS08905 03d85bbc5a9bac89d4c4f84bc1d7a6bb 158 SUPERFAMILY SSF55620 29 151 2.08E-24 T 22-04-2016 NHAM_RS13785 13984067449f4161dc2c31eae253bdfe 449 Pfam PF01425 Amidase 28 436 1.6E-77 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NHAM_RS13785 13984067449f4161dc2c31eae253bdfe 449 Gene3D G3DSA:3.90.1300.10 6 447 4.3E-115 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NHAM_RS13785 13984067449f4161dc2c31eae253bdfe 449 SUPERFAMILY SSF75304 6 445 4.06E-111 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NHAM_RS13785 13984067449f4161dc2c31eae253bdfe 449 PANTHER PTHR11895:SF73 6 447 1.1E-131 T 22-04-2016 NHAM_RS13785 13984067449f4161dc2c31eae253bdfe 449 PANTHER PTHR11895 6 447 1.1E-131 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NHAM_RS08275 5636366070a78824d9438def5217ea07 121 Gene3D G3DSA:2.40.50.100 3 120 8.1E-49 T 22-04-2016 NHAM_RS08275 5636366070a78824d9438def5217ea07 121 Pfam PF01597 Glycine cleavage H-protein 4 118 3.0E-42 T 22-04-2016 IPR002930 Glycine cleavage system H-protein NHAM_RS08275 5636366070a78824d9438def5217ea07 121 SUPERFAMILY SSF51230 3 119 2.36E-42 T 22-04-2016 IPR011053 Single hybrid motif NHAM_RS08275 5636366070a78824d9438def5217ea07 121 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 121 26.483 T 22-04-2016 IPR002930 Glycine cleavage system H-protein NHAM_RS08275 5636366070a78824d9438def5217ea07 121 PANTHER PTHR11715 4 119 6.3E-62 T 22-04-2016 IPR002930 Glycine cleavage system H-protein NHAM_RS08275 5636366070a78824d9438def5217ea07 121 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 43 72 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NHAM_RS08275 5636366070a78824d9438def5217ea07 121 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 119 2.1E-45 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 NHAM_RS12480 57a141d56a64cd14eddda12c58f84af5 429 Pfam PF11799 impB/mucB/samB family C-terminal domain 282 384 2.9E-14 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS12480 57a141d56a64cd14eddda12c58f84af5 429 Hamap MF_01113 DNA polymerase IV [dinB]. 43 391 33.746 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS12480 57a141d56a64cd14eddda12c58f84af5 429 Pfam PF00817 impB/mucB/samB family 49 195 9.1E-44 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS12480 57a141d56a64cd14eddda12c58f84af5 429 SUPERFAMILY SSF100879 281 378 5.69E-25 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS12480 57a141d56a64cd14eddda12c58f84af5 429 Gene3D G3DSA:3.30.1490.100 284 386 5.7E-30 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS12480 57a141d56a64cd14eddda12c58f84af5 429 Gene3D G3DSA:1.10.150.20 207 275 2.2E-19 T 22-04-2016 NHAM_RS12480 57a141d56a64cd14eddda12c58f84af5 429 SUPERFAMILY SSF56672 44 275 4.0E-76 T 22-04-2016 NHAM_RS12480 57a141d56a64cd14eddda12c58f84af5 429 Gene3D G3DSA:3.30.70.270 106 202 1.6E-23 T 22-04-2016 NHAM_RS12480 57a141d56a64cd14eddda12c58f84af5 429 PANTHER PTHR11076 47 382 5.7E-110 T 22-04-2016 NHAM_RS11510 e40007eeea11e1186d5108131c33a552 87 SUPERFAMILY SSF141371 10 85 2.75E-6 T 22-04-2016 NHAM_RS16110 e68f19cd7e5ce441998a7c52e8d63baa 486 PANTHER PTHR11206 8 472 4.2E-93 T 22-04-2016 NHAM_RS16110 e68f19cd7e5ce441998a7c52e8d63baa 486 PIRSF PIRSF006603 33 474 3.2E-56 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NHAM_RS16110 e68f19cd7e5ce441998a7c52e8d63baa 486 Pfam PF01554 MatE 270 434 1.9E-26 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NHAM_RS16110 e68f19cd7e5ce441998a7c52e8d63baa 486 Pfam PF01554 MatE 42 202 4.8E-24 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NHAM_RS16110 e68f19cd7e5ce441998a7c52e8d63baa 486 TIGRFAM TIGR00797 matE: MATE efflux family protein 42 449 8.8E-66 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 NHAM_RS16110 e68f19cd7e5ce441998a7c52e8d63baa 486 PANTHER PTHR11206:SF153 8 472 4.2E-93 T 22-04-2016 NHAM_RS05490 51f46146d0b92e016317a26f02b4b6d1 70 PANTHER PTHR36508 1 70 6.6E-22 T 22-04-2016 NHAM_RS05490 51f46146d0b92e016317a26f02b4b6d1 70 Hamap MF_00715 Protein SlyX [slyX]. 5 70 14.507 T 22-04-2016 IPR007236 SlyX NHAM_RS05490 51f46146d0b92e016317a26f02b4b6d1 70 Gene3D G3DSA:1.20.5.300 2 50 9.0E-16 T 22-04-2016 NHAM_RS05490 51f46146d0b92e016317a26f02b4b6d1 70 Pfam PF04102 SlyX 7 70 5.0E-25 T 22-04-2016 IPR007236 SlyX NHAM_RS00385 f04965b189cc305c032beed2f813065e 257 Pfam PF12146 Serine aminopeptidase, S33 56 146 4.2E-9 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 NHAM_RS00385 f04965b189cc305c032beed2f813065e 257 PANTHER PTHR16138 18 256 2.1E-100 T 22-04-2016 NHAM_RS00385 f04965b189cc305c032beed2f813065e 257 Gene3D G3DSA:3.40.50.1820 29 144 1.8E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS00385 f04965b189cc305c032beed2f813065e 257 Gene3D G3DSA:3.40.50.1820 191 257 1.8E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS00385 f04965b189cc305c032beed2f813065e 257 SUPERFAMILY SSF53474 21 257 1.05E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS09815 778a7465d31035e572af37917380d059 155 SUPERFAMILY SSF47175 89 127 1.62E-5 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 NHAM_RS09815 778a7465d31035e572af37917380d059 155 Gene3D G3DSA:1.20.120.10 92 128 3.7E-4 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 NHAM_RS23050 06658491685b2db6ec7b21ca20772521 123 SUPERFAMILY SSF102114 2 123 2.28E-25 T 22-04-2016 NHAM_RS23050 06658491685b2db6ec7b21ca20772521 123 PANTHER PTHR13932 1 123 1.2E-26 T 22-04-2016 NHAM_RS10460 a114326876873bb2f697dc4c62a0c02a 96 Gene3D G3DSA:1.10.150.250 10 91 4.6E-26 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase NHAM_RS10460 a114326876873bb2f697dc4c62a0c02a 96 PANTHER PTHR12469 6 90 1.1E-34 T 22-04-2016 NHAM_RS10460 a114326876873bb2f697dc4c62a0c02a 96 PANTHER PTHR12469:SF3 6 90 1.1E-34 T 22-04-2016 NHAM_RS10460 a114326876873bb2f697dc4c62a0c02a 96 Pfam PF03937 Flavinator of succinate dehydrogenase 15 86 2.6E-22 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase NHAM_RS10460 a114326876873bb2f697dc4c62a0c02a 96 SUPERFAMILY SSF109910 10 88 4.18E-22 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase NHAM_RS08425 1cc4404da1f4dda08bac013094e96a52 142 SMART SM00116 78 125 3.2E-9 T 22-04-2016 IPR000644 CBS domain NHAM_RS08425 1cc4404da1f4dda08bac013094e96a52 142 SMART SM00116 13 60 8.5E-7 T 22-04-2016 IPR000644 CBS domain NHAM_RS08425 1cc4404da1f4dda08bac013094e96a52 142 SUPERFAMILY SSF54631 1 139 8.97E-32 T 22-04-2016 NHAM_RS08425 1cc4404da1f4dda08bac013094e96a52 142 Pfam PF00571 CBS domain 13 60 5.4E-7 T 22-04-2016 IPR000644 CBS domain NHAM_RS08425 1cc4404da1f4dda08bac013094e96a52 142 Pfam PF00571 CBS domain 71 123 4.5E-13 T 22-04-2016 IPR000644 CBS domain NHAM_RS08425 1cc4404da1f4dda08bac013094e96a52 142 PANTHER PTHR11911 14 139 2.1E-28 T 22-04-2016 NHAM_RS08425 1cc4404da1f4dda08bac013094e96a52 142 Gene3D G3DSA:3.10.580.10 6 125 2.7E-28 T 22-04-2016 NHAM_RS12430 e6164310b4e90e268ec1a001c93564af 428 PANTHER PTHR10587 41 339 9.3E-85 T 22-04-2016 NHAM_RS12430 e6164310b4e90e268ec1a001c93564af 428 Pfam PF01522 Polysaccharide deacetylase 73 194 3.1E-19 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS12430 e6164310b4e90e268ec1a001c93564af 428 Gene3D G3DSA:3.20.20.370 67 259 6.2E-45 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 NHAM_RS12430 e6164310b4e90e268ec1a001c93564af 428 SUPERFAMILY SSF88713 68 259 5.68E-47 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NHAM_RS12430 e6164310b4e90e268ec1a001c93564af 428 PANTHER PTHR10587:SF70 41 339 9.3E-85 T 22-04-2016 NHAM_RS03155 f95cf0e2ccf30bcdbdf83ddf0ce38f5e 96 PANTHER PTHR33219 1 92 4.8E-18 T 22-04-2016 NHAM_RS03155 f95cf0e2ccf30bcdbdf83ddf0ce38f5e 96 Pfam PF02325 YGGT family 10 87 2.4E-20 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 NHAM_RS15930 ed36960f43d343225f5b35c412b71189 166 Pfam PF10722 Putative bacterial sensory transduction regulator 15 143 4.1E-30 T 22-04-2016 IPR019660 Putative sensory transduction regulator YbjN NHAM_RS02630 a1e85ae5f5744a612ddbabf543902ce1 497 Pfam PF01435 Peptidase family M48 83 265 5.6E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NHAM_RS02630 a1e85ae5f5744a612ddbabf543902ce1 497 PANTHER PTHR22726 14 299 1.1E-78 T 22-04-2016 NHAM_RS02630 a1e85ae5f5744a612ddbabf543902ce1 497 Gene3D G3DSA:3.30.2010.10 78 158 1.4E-15 T 22-04-2016 NHAM_RS02630 a1e85ae5f5744a612ddbabf543902ce1 497 PANTHER PTHR22726:SF9 14 299 1.1E-78 T 22-04-2016 NHAM_RS09175 11cfb3553d549365adf94862cc658738 217 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 9 215 32.495 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NHAM_RS09175 11cfb3553d549365adf94862cc658738 217 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 18 209 7.1E-55 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NHAM_RS09175 11cfb3553d549365adf94862cc658738 217 SUPERFAMILY SSF53335 11 212 6.03E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS09175 11cfb3553d549365adf94862cc658738 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 17 209 1.4E-50 T 22-04-2016 NHAM_RS09175 11cfb3553d549365adf94862cc658738 217 Gene3D G3DSA:3.40.50.150 18 212 2.1E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS09175 11cfb3553d549365adf94862cc658738 217 PANTHER PTHR11579 12 208 3.6E-61 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NHAM_RS09760 f22425f650d9a173fad4f817620468e3 278 Gene3D G3DSA:3.40.50.620 139 276 5.2E-11 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS09760 f22425f650d9a173fad4f817620468e3 278 SUPERFAMILY SSF52402 1 145 1.17E-11 T 22-04-2016 NHAM_RS09760 f22425f650d9a173fad4f817620468e3 278 Gene3D G3DSA:3.40.50.620 2 138 1.3E-8 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS09760 f22425f650d9a173fad4f817620468e3 278 SUPERFAMILY SSF52402 151 278 4.19E-13 T 22-04-2016 NHAM_RS01275 80f2410882369bf6f125103a5b74287e 475 SUPERFAMILY SSF111283 28 473 4.32E-126 T 22-04-2016 NHAM_RS01275 80f2410882369bf6f125103a5b74287e 475 Pfam PF01523 Putative modulator of DNA gyrase 35 325 1.5E-60 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS01275 80f2410882369bf6f125103a5b74287e 475 PIRSF PIRSF004919 15 474 3.1E-131 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS01275 80f2410882369bf6f125103a5b74287e 475 PANTHER PTHR30624:SF4 11 475 2.3E-215 T 22-04-2016 NHAM_RS01275 80f2410882369bf6f125103a5b74287e 475 PANTHER PTHR30624 11 475 2.3E-215 T 22-04-2016 NHAM_RS03575 6d896de5a4f621063b78cd5cc731d4d6 209 Pfam PF02108 Flagellar assembly protein FliH 71 181 1.8E-12 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE NHAM_RS02260 bd0aae9aeeec75b0c229404488692e05 231 PANTHER PTHR30183 1 228 4.3E-82 T 22-04-2016 NHAM_RS02260 bd0aae9aeeec75b0c229404488692e05 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 223 6.4E-69 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 NHAM_RS02260 bd0aae9aeeec75b0c229404488692e05 231 SUPERFAMILY SSF161098 5 215 2.35E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS02260 bd0aae9aeeec75b0c229404488692e05 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 225 1.5E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS02260 bd0aae9aeeec75b0c229404488692e05 231 Gene3D G3DSA:1.10.3720.10 9 226 5.4E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS19445 d6bea5eedcb9030ec6f221532dc2ea3e 120 PANTHER PTHR36505 1 113 7.5E-34 T 22-04-2016 NHAM_RS19445 d6bea5eedcb9030ec6f221532dc2ea3e 120 PANTHER PTHR36505:SF1 1 113 7.5E-34 T 22-04-2016 NHAM_RS19445 d6bea5eedcb9030ec6f221532dc2ea3e 120 SUPERFAMILY SSF50346 7 117 1.67E-27 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS19445 d6bea5eedcb9030ec6f221532dc2ea3e 120 Pfam PF05239 PRC-barrel domain 18 74 1.4E-12 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS19445 d6bea5eedcb9030ec6f221532dc2ea3e 120 Gene3D G3DSA:2.30.30.240 17 70 2.0E-14 T 22-04-2016 NHAM_RS21375 3e4f858fde8c0927a35656209d321a20 308 ProSitePatterns PS01007 Transposases, Mutator family, signature. 183 207 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS21375 3e4f858fde8c0927a35656209d321a20 308 PANTHER PTHR33217 10 308 8.7E-140 T 22-04-2016 NHAM_RS21375 3e4f858fde8c0927a35656209d321a20 308 Pfam PF00872 Transposase, Mutator family 6 308 2.7E-118 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS03325 ee7b27b29f3f72140302db7a85ff52a8 168 Pfam PF07750 GcrA cell cycle regulator 5 162 4.8E-63 T 22-04-2016 IPR011681 GcrA cell cycle regulator NHAM_RS21135 dabea4ac6d8d76fa2a16b63a42a8d9f3 92 Gene3D G3DSA:2.30.30.330 44 80 1.5E-8 T 22-04-2016 NHAM_RS21135 dabea4ac6d8d76fa2a16b63a42a8d9f3 92 SUPERFAMILY SSF54001 44 80 5.2E-8 T 22-04-2016 NHAM_RS02760 a084b761fbb36593ef649bbc226f9627 134 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 3 132 2.3E-46 T 22-04-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 NHAM_RS02760 a084b761fbb36593ef649bbc226f9627 134 Gene3D G3DSA:3.30.300.20 42 133 9.7E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta NHAM_RS02760 a084b761fbb36593ef649bbc226f9627 134 Pfam PF02566 OsmC-like protein 36 131 7.8E-18 T 22-04-2016 IPR003718 OsmC/Ohr family NHAM_RS02760 a084b761fbb36593ef649bbc226f9627 134 Gene3D G3DSA:2.20.25.10 2 40 4.3E-12 T 22-04-2016 NHAM_RS02760 a084b761fbb36593ef649bbc226f9627 134 SUPERFAMILY SSF82784 1 132 2.09E-38 T 22-04-2016 IPR003718 OsmC/Ohr family NHAM_RS02760 a084b761fbb36593ef649bbc226f9627 134 PANTHER PTHR33797 1 133 6.8E-42 T 22-04-2016 NHAM_RS24025 10dcee118400ccab61c6877a5a6d2b27 220 SUPERFAMILY SSF51306 102 198 1.29E-8 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C NHAM_RS24025 10dcee118400ccab61c6877a5a6d2b27 220 Gene3D G3DSA:2.10.109.10 109 196 5.7E-6 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain NHAM_RS24025 10dcee118400ccab61c6877a5a6d2b27 220 Pfam PF00717 Peptidase S24-like 132 199 2.8E-6 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 SMART SM00388 44 109 2.5E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 SUPERFAMILY SSF55874 102 268 4.85E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 Pfam PF00072 Response regulator receiver domain 297 407 5.8E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 PANTHER PTHR24423 49 409 5.9E-93 T 22-04-2016 NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 Gene3D G3DSA:1.10.287.130 48 105 7.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 SMART SM00448 295 407 6.3E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 232 250 3.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 215 225 3.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 197 211 3.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 256 269 3.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 Gene3D G3DSA:3.40.50.2300 295 414 1.5E-26 T 22-04-2016 NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 156 270 3.9E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 SUPERFAMILY SSF47384 47 105 1.67E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 Pfam PF00512 His Kinase A (phospho-acceptor) domain 49 96 5.4E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 SMART SM00387 156 272 1.4E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 Gene3D G3DSA:3.30.565.10 117 272 2.4E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS17885 4e88d304132424e86cd97ce82f9701ed 418 SUPERFAMILY SSF52172 293 414 1.42E-27 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS16660 7ee249066ff16a47690471aaa5a6f1c5 313 PANTHER PTHR33608 8 303 1.9E-96 T 22-04-2016 NHAM_RS16660 7ee249066ff16a47690471aaa5a6f1c5 313 PANTHER PTHR33608:SF2 8 303 1.9E-96 T 22-04-2016 NHAM_RS16660 7ee249066ff16a47690471aaa5a6f1c5 313 Pfam PF01882 Protein of unknown function DUF58 56 143 3.9E-17 T 22-04-2016 IPR002881 Domain of unknown function DUF58 NHAM_RS14945 295b6fef9588607b2c25a869660a9963 98 PANTHER PTHR10996:SF127 5 95 4.2E-12 T 22-04-2016 NHAM_RS14945 295b6fef9588607b2c25a869660a9963 98 Gene3D G3DSA:3.40.50.720 6 74 6.1E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14945 295b6fef9588607b2c25a869660a9963 98 SUPERFAMILY SSF51735 6 95 7.58E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14945 295b6fef9588607b2c25a869660a9963 98 PANTHER PTHR10996 5 95 4.2E-12 T 22-04-2016 NHAM_RS14920 42f28e41d322df3c2e5ad2fd3c8e103f 197 Pfam PF03350 Uncharacterized protein family, UPF0114 25 141 2.8E-41 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 NHAM_RS14920 42f28e41d322df3c2e5ad2fd3c8e103f 197 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 23 189 1.5E-58 T 22-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria NHAM_RS14920 42f28e41d322df3c2e5ad2fd3c8e103f 197 PANTHER PTHR38596:SF1 3 196 6.3E-87 T 22-04-2016 NHAM_RS14920 42f28e41d322df3c2e5ad2fd3c8e103f 197 PANTHER PTHR38596 3 196 6.3E-87 T 22-04-2016 NHAM_RS14920 42f28e41d322df3c2e5ad2fd3c8e103f 197 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 194 90.346 T 22-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 NHAM_RS18680 c95c36d0317c3f9c861d97a6bb45c94c 251 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 172 249 1.7E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 NHAM_RS18680 c95c36d0317c3f9c861d97a6bb45c94c 251 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 173 249 5.3E-19 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 NHAM_RS18680 c95c36d0317c3f9c861d97a6bb45c94c 251 PANTHER PTHR33446 73 251 2.2E-12 T 22-04-2016 NHAM_RS18680 c95c36d0317c3f9c861d97a6bb45c94c 251 Gene3D G3DSA:3.30.1150.10 137 249 6.6E-21 T 22-04-2016 NHAM_RS18680 c95c36d0317c3f9c861d97a6bb45c94c 251 PANTHER PTHR33446:SF2 73 251 2.2E-12 T 22-04-2016 NHAM_RS18680 c95c36d0317c3f9c861d97a6bb45c94c 251 SUPERFAMILY SSF74653 148 250 5.49E-20 T 22-04-2016 NHAM_RS20015 6e3e931e73a3b5be1b6bca65110a8c1e 158 PANTHER PTHR24093 1 71 5.2E-37 T 22-04-2016 NHAM_RS20015 6e3e931e73a3b5be1b6bca65110a8c1e 158 Gene3D G3DSA:1.20.1110.10 1 74 4.2E-20 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain NHAM_RS20015 6e3e931e73a3b5be1b6bca65110a8c1e 158 PANTHER PTHR24093:SF49 1 71 5.2E-37 T 22-04-2016 NHAM_RS20015 6e3e931e73a3b5be1b6bca65110a8c1e 158 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 2 21 2.4E-9 T 22-04-2016 NHAM_RS20015 6e3e931e73a3b5be1b6bca65110a8c1e 158 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 25 37 2.4E-9 T 22-04-2016 NHAM_RS20015 6e3e931e73a3b5be1b6bca65110a8c1e 158 SUPERFAMILY SSF56784 1 53 1.02E-13 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS20015 6e3e931e73a3b5be1b6bca65110a8c1e 158 ProSitePatterns PS01229 Hypothetical cof family signature 2. 2 24 - T 22-04-2016 NHAM_RS08665 738c4abc4b47e16fa932d3a6347b368d 187 Pfam PF01765 Ribosome recycling factor 22 185 4.5E-61 T 22-04-2016 IPR023584 Ribosome recycling factor domain NHAM_RS08665 738c4abc4b47e16fa932d3a6347b368d 187 TIGRFAM TIGR00496 frr: ribosome recycling factor 12 187 1.5E-65 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 NHAM_RS08665 738c4abc4b47e16fa932d3a6347b368d 187 PANTHER PTHR20982 3 187 2.0E-77 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 NHAM_RS08665 738c4abc4b47e16fa932d3a6347b368d 187 SUPERFAMILY SSF55194 5 186 2.35E-69 T 22-04-2016 IPR023584 Ribosome recycling factor domain NHAM_RS08665 738c4abc4b47e16fa932d3a6347b368d 187 Hamap MF_00040 Ribosome-recycling factor [frr]. 5 187 26.22 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 NHAM_RS08665 738c4abc4b47e16fa932d3a6347b368d 187 Gene3D G3DSA:1.10.132.20 68 187 7.0E-44 T 22-04-2016 IPR023584 Ribosome recycling factor domain NHAM_RS08135 f818cfbf5cf6eb313de5419f41f441ed 198 Pfam PF14235 Domain of unknown function (DUF4337) 20 187 6.2E-44 T 22-04-2016 IPR025570 Protein of unknown function DUF4337 NHAM_RS04400 ce67641641f1a5522610f1de3e9904ac 311 PANTHER PTHR30537 28 311 1.4E-96 T 22-04-2016 NHAM_RS04400 ce67641641f1a5522610f1de3e9904ac 311 Gene3D G3DSA:3.40.190.10 91 177 2.1E-15 T 22-04-2016 NHAM_RS04400 ce67641641f1a5522610f1de3e9904ac 311 SUPERFAMILY SSF53850 89 296 6.7E-33 T 22-04-2016 NHAM_RS04400 ce67641641f1a5522610f1de3e9904ac 311 Gene3D G3DSA:1.10.10.10 31 79 7.3E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04400 ce67641641f1a5522610f1de3e9904ac 311 Pfam PF03466 LysR substrate binding domain 89 293 8.8E-32 T 22-04-2016 IPR005119 LysR, substrate-binding NHAM_RS04400 ce67641641f1a5522610f1de3e9904ac 311 Gene3D G3DSA:3.40.190.10 178 260 7.3E-4 T 22-04-2016 NHAM_RS04400 ce67641641f1a5522610f1de3e9904ac 311 PANTHER PTHR30537:SF24 28 311 1.4E-96 T 22-04-2016 NHAM_RS04400 ce67641641f1a5522610f1de3e9904ac 311 SUPERFAMILY SSF46785 27 110 5.58E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS07615 84ec8b59195b7aa23feadac1a6fcc5c6 166 Gene3D G3DSA:3.40.630.30 10 161 9.2E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS07615 84ec8b59195b7aa23feadac1a6fcc5c6 166 Pfam PF13673 Acetyltransferase (GNAT) domain 53 159 3.7E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS07615 84ec8b59195b7aa23feadac1a6fcc5c6 166 SUPERFAMILY SSF55729 10 160 5.85E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS20300 24d547ce5673c7cf32cff83fb04a0b6b 167 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 94 1.5E-25 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS20300 24d547ce5673c7cf32cff83fb04a0b6b 167 PANTHER PTHR30007 15 146 4.2E-42 T 22-04-2016 NHAM_RS20300 24d547ce5673c7cf32cff83fb04a0b6b 167 PANTHER PTHR30007:SF0 15 146 4.2E-42 T 22-04-2016 NHAM_RS18115 c0577380cf9fc1bd0807b3e70b09423d 110 Pfam PF13747 Domain of unknown function (DUF4164) 20 104 3.2E-29 T 22-04-2016 IPR025310 Protein of unknown function DUF4164 NHAM_RS11985 60bff8538485abb1a0fc665bcc6e3032 79 Pfam PF00550 Phosphopantetheine attachment site 6 71 8.1E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain NHAM_RS11985 60bff8538485abb1a0fc665bcc6e3032 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site NHAM_RS11985 60bff8538485abb1a0fc665bcc6e3032 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.514 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 NHAM_RS11985 60bff8538485abb1a0fc665bcc6e3032 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 7.4E-32 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 NHAM_RS11985 60bff8538485abb1a0fc665bcc6e3032 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 1.0E-13 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 NHAM_RS11985 60bff8538485abb1a0fc665bcc6e3032 79 SUPERFAMILY SSF47336 2 76 3.93E-22 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain NHAM_RS11985 60bff8538485abb1a0fc665bcc6e3032 79 Gene3D G3DSA:1.10.1200.10 3 76 5.7E-32 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain NHAM_RS11985 60bff8538485abb1a0fc665bcc6e3032 79 PANTHER PTHR20863 3 76 5.9E-27 T 22-04-2016 NHAM_RS03075 a0bcf60fd838ddacd620a4436e3636e6 253 SUPERFAMILY SSF46565 196 246 1.7E-9 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS03075 a0bcf60fd838ddacd620a4436e3636e6 253 Gene3D G3DSA:1.10.287.110 195 246 1.8E-10 T 22-04-2016 IPR001623 DnaJ domain NHAM_RS10515 e5eb20b35aba19dc3ab49181e0bfc685 471 PANTHER PTHR30203 3 471 1.7E-249 T 22-04-2016 NHAM_RS10515 e5eb20b35aba19dc3ab49181e0bfc685 471 Gene3D G3DSA:1.20.1600.10 45 83 1.4E-95 T 22-04-2016 NHAM_RS10515 e5eb20b35aba19dc3ab49181e0bfc685 471 Gene3D G3DSA:1.20.1600.10 137 308 1.4E-95 T 22-04-2016 NHAM_RS10515 e5eb20b35aba19dc3ab49181e0bfc685 471 Gene3D G3DSA:1.20.1600.10 346 460 1.4E-95 T 22-04-2016 NHAM_RS10515 e5eb20b35aba19dc3ab49181e0bfc685 471 SUPERFAMILY SSF56954 3 462 3.27E-106 T 22-04-2016 NHAM_RS10515 e5eb20b35aba19dc3ab49181e0bfc685 471 PANTHER PTHR30203:SF10 3 471 1.7E-249 T 22-04-2016 NHAM_RS10515 e5eb20b35aba19dc3ab49181e0bfc685 471 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 459 8.6E-108 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NHAM_RS10515 e5eb20b35aba19dc3ab49181e0bfc685 471 Pfam PF02321 Outer membrane efflux protein 276 457 1.2E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NHAM_RS10515 e5eb20b35aba19dc3ab49181e0bfc685 471 Pfam PF02321 Outer membrane efflux protein 58 248 5.3E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NHAM_RS10515 e5eb20b35aba19dc3ab49181e0bfc685 471 Gene3D G3DSA:2.20.200.10 93 136 5.4E-14 T 22-04-2016 NHAM_RS10515 e5eb20b35aba19dc3ab49181e0bfc685 471 Gene3D G3DSA:2.20.200.10 309 344 5.4E-14 T 22-04-2016 NHAM_RS17155 8f2196baef96e67a0ea736362f4a9859 72 PANTHER PTHR26402 8 66 1.7E-12 T 22-04-2016 NHAM_RS17155 8f2196baef96e67a0ea736362f4a9859 72 Pfam PF00196 Bacterial regulatory proteins, luxR family 7 60 1.3E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS17155 8f2196baef96e67a0ea736362f4a9859 72 Gene3D G3DSA:1.10.10.10 7 65 4.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS17155 8f2196baef96e67a0ea736362f4a9859 72 PANTHER PTHR26402:SF458 8 66 1.7E-12 T 22-04-2016 NHAM_RS17155 8f2196baef96e67a0ea736362f4a9859 72 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 8 22 9.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS17155 8f2196baef96e67a0ea736362f4a9859 72 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 22 38 9.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS17155 8f2196baef96e67a0ea736362f4a9859 72 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 38 50 9.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS17155 8f2196baef96e67a0ea736362f4a9859 72 SMART SM00421 5 62 9.9E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NHAM_RS17155 8f2196baef96e67a0ea736362f4a9859 72 SUPERFAMILY SSF46894 6 65 7.48E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NHAM_RS13525 799e9c6647ffb456ed8b7c13038de0b5 401 PANTHER PTHR10617 14 334 2.9E-20 T 22-04-2016 NHAM_RS13525 799e9c6647ffb456ed8b7c13038de0b5 401 Pfam PF01494 FAD binding domain 15 337 3.6E-13 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 NHAM_RS13525 799e9c6647ffb456ed8b7c13038de0b5 401 SUPERFAMILY SSF51905 286 395 2.68E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13525 799e9c6647ffb456ed8b7c13038de0b5 401 SUPERFAMILY SSF51905 14 186 2.68E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13525 799e9c6647ffb456ed8b7c13038de0b5 401 Gene3D G3DSA:3.50.50.60 291 334 1.8E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13525 799e9c6647ffb456ed8b7c13038de0b5 401 Gene3D G3DSA:3.50.50.60 11 191 1.8E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13525 799e9c6647ffb456ed8b7c13038de0b5 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 15 37 8.1E-13 T 22-04-2016 NHAM_RS13525 799e9c6647ffb456ed8b7c13038de0b5 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 314 330 8.1E-13 T 22-04-2016 NHAM_RS13525 799e9c6647ffb456ed8b7c13038de0b5 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 165 180 8.1E-13 T 22-04-2016 NHAM_RS13525 799e9c6647ffb456ed8b7c13038de0b5 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 314 8.1E-13 T 22-04-2016 NHAM_RS17315 b2f5264e310ed5cef8d183aa44e64fd6 381 Gene3D G3DSA:3.40.50.180 187 377 2.7E-64 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NHAM_RS17315 b2f5264e310ed5cef8d183aa44e64fd6 381 Pfam PF01339 CheB methylesterase 193 372 3.8E-51 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NHAM_RS17315 b2f5264e310ed5cef8d183aa44e64fd6 381 SUPERFAMILY SSF52172 18 133 2.13E-26 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS17315 b2f5264e310ed5cef8d183aa44e64fd6 381 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 19 377 34.27 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NHAM_RS17315 b2f5264e310ed5cef8d183aa44e64fd6 381 SMART SM00448 19 134 1.8E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS17315 b2f5264e310ed5cef8d183aa44e64fd6 381 SUPERFAMILY SSF52738 188 378 3.27E-60 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NHAM_RS17315 b2f5264e310ed5cef8d183aa44e64fd6 381 Pfam PF00072 Response regulator receiver domain 21 132 5.1E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS17315 b2f5264e310ed5cef8d183aa44e64fd6 381 PANTHER PTHR24421:SF16 13 372 1.1E-139 T 22-04-2016 NHAM_RS17315 b2f5264e310ed5cef8d183aa44e64fd6 381 PANTHER PTHR24421 13 372 1.1E-139 T 22-04-2016 NHAM_RS17315 b2f5264e310ed5cef8d183aa44e64fd6 381 Gene3D G3DSA:3.40.50.2300 15 152 2.4E-28 T 22-04-2016 NHAM_RS17315 b2f5264e310ed5cef8d183aa44e64fd6 381 PIRSF PIRSF000876 16 381 1.2E-118 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NHAM_RS00765 93d3626e7a60c4297a509d7c91d7c953 197 Gene3D G3DSA:3.90.20.20 32 131 1.3E-32 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil NHAM_RS00765 93d3626e7a60c4297a509d7c91d7c953 197 SUPERFAMILY SSF51064 133 189 4.84E-19 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 NHAM_RS00765 93d3626e7a60c4297a509d7c91d7c953 197 PANTHER PTHR21237 37 191 2.0E-74 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NHAM_RS00765 93d3626e7a60c4297a509d7c91d7c953 197 Hamap MF_01151 Protein GrpE [grpE]. 2 188 20.106 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NHAM_RS00765 93d3626e7a60c4297a509d7c91d7c953 197 PRINTS PR00773 GrpE protein signature 140 155 6.6E-28 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NHAM_RS00765 93d3626e7a60c4297a509d7c91d7c953 197 PRINTS PR00773 GrpE protein signature 80 95 6.6E-28 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NHAM_RS00765 93d3626e7a60c4297a509d7c91d7c953 197 PRINTS PR00773 GrpE protein signature 167 186 6.6E-28 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NHAM_RS00765 93d3626e7a60c4297a509d7c91d7c953 197 PRINTS PR00773 GrpE protein signature 52 68 6.6E-28 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NHAM_RS00765 93d3626e7a60c4297a509d7c91d7c953 197 ProSitePatterns PS01071 grpE protein signature. 143 186 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NHAM_RS00765 93d3626e7a60c4297a509d7c91d7c953 197 Gene3D G3DSA:2.30.22.10 132 189 4.3E-26 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 NHAM_RS00765 93d3626e7a60c4297a509d7c91d7c953 197 SUPERFAMILY SSF58014 34 132 3.14E-27 T 22-04-2016 NHAM_RS00765 93d3626e7a60c4297a509d7c91d7c953 197 Pfam PF01025 GrpE 34 188 6.1E-52 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 NHAM_RS01340 de484baba5b3a03c92f4d57cf5197a64 161 Hamap MF_01398 ATP synthase subunit b [atpF]. 3 160 11.022 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 NHAM_RS01340 de484baba5b3a03c92f4d57cf5197a64 161 Pfam PF00430 ATP synthase B/B' CF(0) 8 136 1.3E-25 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 NHAM_RS01890 3720635cbfd82e54134860f50320c662 141 PANTHER PTHR24423 9 138 1.8E-16 T 22-04-2016 NHAM_RS01890 3720635cbfd82e54134860f50320c662 141 Gene3D G3DSA:3.30.450.20 9 122 2.5E-26 T 22-04-2016 NHAM_RS01890 3720635cbfd82e54134860f50320c662 141 Pfam PF00989 PAS fold 9 121 4.0E-19 T 22-04-2016 IPR013767 PAS fold GO:0006355 NHAM_RS01890 3720635cbfd82e54134860f50320c662 141 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 130 5.1E-23 T 22-04-2016 IPR000014 PAS domain NHAM_RS01890 3720635cbfd82e54134860f50320c662 141 SMART SM00091 5 71 5.9E-12 T 22-04-2016 IPR000014 PAS domain NHAM_RS01890 3720635cbfd82e54134860f50320c662 141 SUPERFAMILY SSF55785 16 133 1.2E-27 T 22-04-2016 IPR000014 PAS domain NHAM_RS01890 3720635cbfd82e54134860f50320c662 141 SMART SM00086 82 124 4.9E-4 T 22-04-2016 IPR001610 PAC motif NHAM_RS08025 243b0f97ef5cdbb041e27fc832833fd7 130 PIRSF PIRSF002131 1 130 7.0E-53 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NHAM_RS08025 243b0f97ef5cdbb041e27fc832833fd7 130 Gene3D G3DSA:3.30.420.80 8 130 8.4E-56 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NHAM_RS08025 243b0f97ef5cdbb041e27fc832833fd7 130 Pfam PF00411 Ribosomal protein S11 20 129 6.0E-49 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NHAM_RS08025 243b0f97ef5cdbb041e27fc832833fd7 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 8.0E-58 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08025 243b0f97ef5cdbb041e27fc832833fd7 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 33.258 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NHAM_RS08025 243b0f97ef5cdbb041e27fc832833fd7 130 PANTHER PTHR11759 11 130 3.5E-69 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NHAM_RS08025 243b0f97ef5cdbb041e27fc832833fd7 130 SUPERFAMILY SSF53137 15 130 5.67E-49 T 22-04-2016 NHAM_RS20525 0ed9760eadca67045659afaeefd2a9e4 398 SUPERFAMILY SSF56349 89 355 5.77E-21 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS20525 0ed9760eadca67045659afaeefd2a9e4 398 Gene3D G3DSA:1.10.150.130 90 173 4.4E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal NHAM_RS14970 766d9881c9adefdd9fe3bfe53d61c430 81 Pfam PF04226 Transglycosylase associated protein 32 80 1.8E-12 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 NHAM_RS14970 766d9881c9adefdd9fe3bfe53d61c430 81 PANTHER PTHR33884 1 80 5.4E-19 T 22-04-2016 NHAM_RS02505 e8c885c88ec4b40ab1ce1f5d76a7ffd4 308 PANTHER PTHR10657:SF11 24 284 1.5E-54 T 22-04-2016 NHAM_RS02505 e8c885c88ec4b40ab1ce1f5d76a7ffd4 308 SUPERFAMILY SSF54534 145 238 1.37E-34 T 22-04-2016 NHAM_RS02505 e8c885c88ec4b40ab1ce1f5d76a7ffd4 308 Gene3D G3DSA:3.10.50.40 144 262 5.7E-46 T 22-04-2016 NHAM_RS02505 e8c885c88ec4b40ab1ce1f5d76a7ffd4 308 PANTHER PTHR10657 24 284 1.5E-54 T 22-04-2016 NHAM_RS02505 e8c885c88ec4b40ab1ce1f5d76a7ffd4 308 Pfam PF13616 PPIC-type PPIASE domain 147 240 5.6E-27 T 22-04-2016 NHAM_RS02505 e8c885c88ec4b40ab1ce1f5d76a7ffd4 308 SUPERFAMILY SSF109998 41 179 3.14E-17 T 22-04-2016 IPR027304 Trigger factor/SurA domain NHAM_RS20110 ef7186e0cabe1a6e2b1a1f1150a6e0d3 499 Pfam PF00665 Integrase core domain 127 253 1.4E-18 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS20110 ef7186e0cabe1a6e2b1a1f1150a6e0d3 499 PANTHER PTHR35004 2 443 1.2E-168 T 22-04-2016 NHAM_RS20110 ef7186e0cabe1a6e2b1a1f1150a6e0d3 499 SUPERFAMILY SSF53098 127 285 2.53E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS20110 ef7186e0cabe1a6e2b1a1f1150a6e0d3 499 Gene3D G3DSA:3.30.420.10 140 288 1.9E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS20110 ef7186e0cabe1a6e2b1a1f1150a6e0d3 499 PANTHER PTHR35004:SF2 2 443 1.2E-168 T 22-04-2016 NHAM_RS02560 41205050c874d32a256ab9aa3dbe2638 91 SUPERFAMILY SSF82657 2 89 8.89E-27 T 22-04-2016 IPR002634 BolA protein NHAM_RS02560 41205050c874d32a256ab9aa3dbe2638 91 Pfam PF01722 BolA-like protein 11 88 1.5E-30 T 22-04-2016 IPR002634 BolA protein NHAM_RS02560 41205050c874d32a256ab9aa3dbe2638 91 PANTHER PTHR12735:SF24 5 91 1.7E-32 T 22-04-2016 NHAM_RS02560 41205050c874d32a256ab9aa3dbe2638 91 PANTHER PTHR12735 5 91 1.7E-32 T 22-04-2016 NHAM_RS02560 41205050c874d32a256ab9aa3dbe2638 91 Gene3D G3DSA:3.30.70.1500 2 85 3.4E-29 T 22-04-2016 NHAM_RS02560 41205050c874d32a256ab9aa3dbe2638 91 PIRSF PIRSF003113 1 91 2.3E-30 T 22-04-2016 IPR002634 BolA protein NHAM_RS01005 475a65ca9e191a03be5da9d5f3fd554d 172 SUPERFAMILY SSF141523 34 170 5.36E-32 T 22-04-2016 NHAM_RS01005 475a65ca9e191a03be5da9d5f3fd554d 172 PANTHER PTHR30582 29 171 7.3E-47 T 22-04-2016 NHAM_RS01005 475a65ca9e191a03be5da9d5f3fd554d 172 Gene3D G3DSA:2.40.440.10 34 170 1.0E-34 T 22-04-2016 NHAM_RS01005 475a65ca9e191a03be5da9d5f3fd554d 172 Pfam PF03734 L,D-transpeptidase catalytic domain 40 169 2.5E-18 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NHAM_RS01005 475a65ca9e191a03be5da9d5f3fd554d 172 PANTHER PTHR30582:SF1 29 171 7.3E-47 T 22-04-2016 NHAM_RS05115 0f4b92ee04936eb343742b22a913ccec 1487 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1132 1474 8.3E-44 T 22-04-2016 IPR007452 Translocation and assembly module TamB NHAM_RS05115 0f4b92ee04936eb343742b22a913ccec 1487 PANTHER PTHR36985 735 1235 1.3E-15 T 22-04-2016 NHAM_RS05115 0f4b92ee04936eb343742b22a913ccec 1487 PANTHER PTHR36985 1253 1487 1.3E-15 T 22-04-2016 NHAM_RS16000 273ec6648829b3323bb185689b173854 247 Gene3D G3DSA:3.30.930.10 20 197 1.9E-53 T 22-04-2016 NHAM_RS16000 273ec6648829b3323bb185689b173854 247 Pfam PF16917 Biotin/lipoate A/B protein ligase family 13 194 1.2E-58 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 NHAM_RS16000 273ec6648829b3323bb185689b173854 247 SUPERFAMILY SSF55681 55 196 1.81E-7 T 22-04-2016 NHAM_RS06920 c5073678a7924dc670014dc6c2a64645 1045 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 857 912 6.4E-5 T 22-04-2016 NHAM_RS06920 c5073678a7924dc670014dc6c2a64645 1045 PANTHER PTHR41711 2 919 1.3E-109 T 22-04-2016 NHAM_RS06920 c5073678a7924dc670014dc6c2a64645 1045 Pfam PF04465 Protein of unknown function (DUF499) 112 382 2.3E-19 T 22-04-2016 IPR007555 Protein of unknown function DUF499 NHAM_RS06920 c5073678a7924dc670014dc6c2a64645 1045 PANTHER PTHR41711:SF1 2 919 1.3E-109 T 22-04-2016 NHAM_RS09860 dfa74dc7235ff1e09925bfc7612e6955 228 SMART SM00116 10 58 2.0E-11 T 22-04-2016 IPR000644 CBS domain NHAM_RS09860 dfa74dc7235ff1e09925bfc7612e6955 228 SMART SM00116 97 145 2.1E-11 T 22-04-2016 IPR000644 CBS domain NHAM_RS09860 dfa74dc7235ff1e09925bfc7612e6955 228 PANTHER PTHR11911:SF90 1 145 1.1E-39 T 22-04-2016 NHAM_RS09860 dfa74dc7235ff1e09925bfc7612e6955 228 PANTHER PTHR11911 1 145 1.1E-39 T 22-04-2016 NHAM_RS09860 dfa74dc7235ff1e09925bfc7612e6955 228 Pfam PF00571 CBS domain 3 57 4.9E-14 T 22-04-2016 IPR000644 CBS domain NHAM_RS09860 dfa74dc7235ff1e09925bfc7612e6955 228 Pfam PF00571 CBS domain 91 145 3.6E-13 T 22-04-2016 IPR000644 CBS domain NHAM_RS09860 dfa74dc7235ff1e09925bfc7612e6955 228 PIRSF PIRSF036990 1 227 1.3E-73 T 22-04-2016 IPR017080 Uncharacterised conserved protein UCP036990, CBS, BON NHAM_RS09860 dfa74dc7235ff1e09925bfc7612e6955 228 Gene3D G3DSA:3.10.580.10 1 145 4.0E-35 T 22-04-2016 NHAM_RS09860 dfa74dc7235ff1e09925bfc7612e6955 228 Pfam PF04972 BON domain 156 221 8.5E-13 T 22-04-2016 IPR007055 BON domain NHAM_RS09860 dfa74dc7235ff1e09925bfc7612e6955 228 SUPERFAMILY SSF54631 1 143 1.39E-35 T 22-04-2016 NHAM_RS00160 2c3e80399b0712910b73754d66e65ec0 412 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 124 272 6.4E-50 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 NHAM_RS00160 2c3e80399b0712910b73754d66e65ec0 412 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 102 397 18.414 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS00160 2c3e80399b0712910b73754d66e65ec0 412 PANTHER PTHR13767 42 397 4.4E-122 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS00160 2c3e80399b0712910b73754d66e65ec0 412 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 273 336 1.1E-18 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal NHAM_RS00160 2c3e80399b0712910b73754d66e65ec0 412 SUPERFAMILY SSF55120 102 317 1.53E-75 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS00160 2c3e80399b0712910b73754d66e65ec0 412 Gene3D G3DSA:2.30.130.10 339 398 8.2E-4 T 22-04-2016 IPR015947 PUA-like domain NHAM_RS00160 2c3e80399b0712910b73754d66e65ec0 412 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 340 397 2.0E-6 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS00160 2c3e80399b0712910b73754d66e65ec0 412 PANTHER PTHR13767:SF2 42 397 4.4E-122 T 22-04-2016 NHAM_RS00160 2c3e80399b0712910b73754d66e65ec0 412 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 103 311 4.0E-67 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 NHAM_RS23925 433561f75ac1f7d4f177f3dfee1c77ac 90 PANTHER PTHR10788 1 90 4.1E-33 T 22-04-2016 NHAM_RS23925 433561f75ac1f7d4f177f3dfee1c77ac 90 Gene3D G3DSA:3.40.50.2000 1 72 7.7E-26 T 22-04-2016 NHAM_RS23925 433561f75ac1f7d4f177f3dfee1c77ac 90 Pfam PF00982 Glycosyltransferase family 20 1 89 2.4E-24 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 NHAM_RS23925 433561f75ac1f7d4f177f3dfee1c77ac 90 SUPERFAMILY SSF53756 1 89 7.53E-27 T 22-04-2016 NHAM_RS23925 433561f75ac1f7d4f177f3dfee1c77ac 90 PANTHER PTHR10788:SF6 1 90 4.1E-33 T 22-04-2016 NHAM_RS00905 2e26e22b3a1d6093813a3497e324a8d4 254 PANTHER PTHR35811:SF1 2 252 5.6E-50 T 22-04-2016 NHAM_RS00905 2e26e22b3a1d6093813a3497e324a8d4 254 Pfam PF12872 OST-HTH/LOTUS domain 175 239 2.2E-14 T 22-04-2016 IPR025605 OST-HTH/LOTUS domain NHAM_RS00905 2e26e22b3a1d6093813a3497e324a8d4 254 Pfam PF01936 NYN domain 11 146 7.7E-27 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type NHAM_RS00905 2e26e22b3a1d6093813a3497e324a8d4 254 PANTHER PTHR35811 2 252 5.6E-50 T 22-04-2016 NHAM_RS00905 2e26e22b3a1d6093813a3497e324a8d4 254 Gene3D G3DSA:3.40.50.1010 4 148 2.3E-25 T 22-04-2016 IPR029060 PIN domain-like NHAM_RS12000 48c9b2bf65036985e2c4e56ce04abef7 147 Gene3D G3DSA:3.30.70.60 1 104 4.8E-33 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 NHAM_RS12000 48c9b2bf65036985e2c4e56ce04abef7 147 Pfam PF01250 Ribosomal protein S6 4 92 1.2E-24 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS12000 48c9b2bf65036985e2c4e56ce04abef7 147 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 19.29 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS12000 48c9b2bf65036985e2c4e56ce04abef7 147 PANTHER PTHR21011 1 126 4.5E-31 T 22-04-2016 NHAM_RS12000 48c9b2bf65036985e2c4e56ce04abef7 147 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 94 8.5E-25 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS12000 48c9b2bf65036985e2c4e56ce04abef7 147 SUPERFAMILY SSF54995 1 104 8.76E-32 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 NHAM_RS19935 55448d5a0511ac0f5c1200379d0a4da1 213 Pfam PF05598 Transposase domain (DUF772) 55 125 3.9E-18 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS19935 55448d5a0511ac0f5c1200379d0a4da1 213 PANTHER PTHR35604 57 183 2.7E-64 T 22-04-2016 NHAM_RS19935 55448d5a0511ac0f5c1200379d0a4da1 213 PANTHER PTHR35604:SF2 57 183 2.7E-64 T 22-04-2016 NHAM_RS03525 0e5cb2db95182a7c4fa92f5abb31254d 200 Pfam PF05257 CHAP domain 108 178 8.8E-8 T 22-04-2016 IPR007921 CHAP domain NHAM_RS03525 0e5cb2db95182a7c4fa92f5abb31254d 200 TIGRFAM TIGR02594 TIGR02594: TIGR02594 family protein 107 198 8.1E-34 T 22-04-2016 IPR013423 Conserved hypothetical protein CHP02594 NHAM_RS03525 0e5cb2db95182a7c4fa92f5abb31254d 200 SUPERFAMILY SSF54001 95 183 2.84E-8 T 22-04-2016 NHAM_RS12110 39b3225b3b2dd1e16b21979412fe4bda 673 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 1 331 1.6E-50 T 22-04-2016 IPR010090 Phage tail tape measure protein NHAM_RS12110 39b3225b3b2dd1e16b21979412fe4bda 673 Pfam PF10145 Phage-related minor tail protein 29 223 1.4E-28 T 22-04-2016 IPR010090 Phage tail tape measure protein NHAM_RS14330 399d1d45d82cd2c54c69eb37635be26f 285 SUPERFAMILY SSF51735 2 276 6.06E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14330 399d1d45d82cd2c54c69eb37635be26f 285 Gene3D G3DSA:3.40.50.720 69 216 7.3E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14330 399d1d45d82cd2c54c69eb37635be26f 285 PANTHER PTHR10366 6 276 2.8E-23 T 22-04-2016 NHAM_RS14330 399d1d45d82cd2c54c69eb37635be26f 285 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 58 9.7E-5 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NHAM_RS14330 399d1d45d82cd2c54c69eb37635be26f 285 Gene3D G3DSA:3.40.50.720 2 68 3.8E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00465 d845ba5f49aca8968d3dcf3046299eb2 149 SMART SM00100 15 130 1.2E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS00465 d845ba5f49aca8968d3dcf3046299eb2 149 PANTHER PTHR24567:SF36 1 144 2.2E-36 T 22-04-2016 NHAM_RS00465 d845ba5f49aca8968d3dcf3046299eb2 149 SUPERFAMILY SSF51206 9 138 2.09E-25 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like NHAM_RS00465 d845ba5f49aca8968d3dcf3046299eb2 149 PANTHER PTHR24567 1 144 2.2E-36 T 22-04-2016 NHAM_RS00465 d845ba5f49aca8968d3dcf3046299eb2 149 Gene3D G3DSA:2.60.120.10 9 140 1.7E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS00465 d845ba5f49aca8968d3dcf3046299eb2 149 Pfam PF00027 Cyclic nucleotide-binding domain 34 118 5.6E-17 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS12185 996627fed168d5c0b4cfbf678cdc907c 343 Pfam PF03864 Phage major capsid protein E 10 341 1.8E-82 T 22-04-2016 IPR005564 Major capsid protein GpE GO:0019028 NHAM_RS01885 f7afc8ec2901d224e5af36921fd303b2 236 PANTHER PTHR11002 4 236 3.2E-57 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS01885 f7afc8ec2901d224e5af36921fd303b2 236 Gene3D G3DSA:3.40.1050.10 30 235 3.6E-53 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS01885 f7afc8ec2901d224e5af36921fd303b2 236 PANTHER PTHR11002:SF17 4 236 3.2E-57 T 22-04-2016 NHAM_RS01885 f7afc8ec2901d224e5af36921fd303b2 236 SMART SM00947 76 236 6.3E-46 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS01885 f7afc8ec2901d224e5af36921fd303b2 236 Pfam PF00484 Carbonic anhydrase 84 232 6.2E-35 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS01885 f7afc8ec2901d224e5af36921fd303b2 236 SUPERFAMILY SSF53056 31 235 8.24E-54 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS03710 f575c9d1d86588fe82cb8ce57bffcedc 442 SUPERFAMILY SSF103473 8 432 2.22E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS03710 f575c9d1d86588fe82cb8ce57bffcedc 442 Pfam PF07690 Major Facilitator Superfamily 25 367 1.9E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS03710 f575c9d1d86588fe82cb8ce57bffcedc 442 Gene3D G3DSA:1.20.1250.20 235 429 1.8E-21 T 22-04-2016 NHAM_RS03710 f575c9d1d86588fe82cb8ce57bffcedc 442 ProSitePatterns PS00217 Sugar transport proteins signature 2. 122 147 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NHAM_RS03710 f575c9d1d86588fe82cb8ce57bffcedc 442 PANTHER PTHR23508:SF7 3 434 3.5E-238 T 22-04-2016 NHAM_RS03710 f575c9d1d86588fe82cb8ce57bffcedc 442 Gene3D G3DSA:1.20.1250.20 10 212 2.0E-23 T 22-04-2016 NHAM_RS03710 f575c9d1d86588fe82cb8ce57bffcedc 442 PANTHER PTHR23508 3 434 3.5E-238 T 22-04-2016 NHAM_RS15205 dde5bf51e44ad43d1c91a2a97bf4c316 106 PANTHER PTHR30520 10 71 9.4E-17 T 22-04-2016 NHAM_RS15205 dde5bf51e44ad43d1c91a2a97bf4c316 106 PANTHER PTHR30520:SF5 10 71 9.4E-17 T 22-04-2016 NHAM_RS15205 dde5bf51e44ad43d1c91a2a97bf4c316 106 Gene3D G3DSA:1.20.1080.10 10 73 8.9E-12 T 22-04-2016 IPR023271 Aquaporin-like NHAM_RS15205 dde5bf51e44ad43d1c91a2a97bf4c316 106 Pfam PF01226 Formate/nitrite transporter 10 74 1.1E-12 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 NHAM_RS16800 1c59072c4154415d7789cecdcdf068b7 385 SUPERFAMILY SSF111369 204 304 3.14E-14 T 22-04-2016 NHAM_RS16800 1c59072c4154415d7789cecdcdf068b7 385 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 4.0E-6 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS16800 1c59072c4154415d7789cecdcdf068b7 385 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 362 4.0E-6 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NHAM_RS16800 1c59072c4154415d7789cecdcdf068b7 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 307 6.7E-21 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS16800 1c59072c4154415d7789cecdcdf068b7 385 Gene3D G3DSA:2.40.50.100 68 98 8.0E-24 T 22-04-2016 NHAM_RS16800 1c59072c4154415d7789cecdcdf068b7 385 Gene3D G3DSA:2.40.50.100 229 262 8.0E-24 T 22-04-2016 NHAM_RS16800 1c59072c4154415d7789cecdcdf068b7 385 Pfam PF00529 HlyD membrane-fusion protein of T1SS 115 356 1.1E-7 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS16800 1c59072c4154415d7789cecdcdf068b7 385 PANTHER PTHR30386 24 361 2.1E-109 T 22-04-2016 NHAM_RS16800 1c59072c4154415d7789cecdcdf068b7 385 PANTHER PTHR30386:SF7 24 361 2.1E-109 T 22-04-2016 NHAM_RS16800 1c59072c4154415d7789cecdcdf068b7 385 SUPERFAMILY SSF111369 68 149 4.32E-11 T 22-04-2016 NHAM_RS10350 9941bbca94ee4be97557503e0220b923 621 Gene3D G3DSA:3.40.50.300 271 523 3.0E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10350 9941bbca94ee4be97557503e0220b923 621 Pfam PF13481 AAA domain 285 460 2.9E-33 T 22-04-2016 NHAM_RS10350 9941bbca94ee4be97557503e0220b923 621 SUPERFAMILY SSF52540 289 511 6.41E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00895 4e7544e68c88b28bb41a580bf42fb062 246 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 96 198 1.8E-8 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related NHAM_RS00895 4e7544e68c88b28bb41a580bf42fb062 246 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 33 199 9.0E-13 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 NHAM_RS05230 b8224cb5270bf431de0f69b63dfd0aff 165 ProSitePatterns PS00194 Thioredoxin family active site. 47 65 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NHAM_RS05230 b8224cb5270bf431de0f69b63dfd0aff 165 SUPERFAMILY SSF52833 39 159 1.4E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS05230 b8224cb5270bf431de0f69b63dfd0aff 165 Pfam PF08534 Redoxin 38 143 9.3E-7 T 22-04-2016 IPR013740 Redoxin GO:0016491 NHAM_RS05230 b8224cb5270bf431de0f69b63dfd0aff 165 Gene3D G3DSA:3.40.30.10 38 158 3.4E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS03980 fd9e5daf1f7af0b53ca6e19d53a65625 197 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 188 3.6E-37 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 NHAM_RS03980 fd9e5daf1f7af0b53ca6e19d53a65625 197 PANTHER PTHR23029:SF1 1 188 7.5E-43 T 22-04-2016 NHAM_RS03980 fd9e5daf1f7af0b53ca6e19d53a65625 197 SUPERFAMILY SSF53254 1 191 1.08E-48 T 22-04-2016 IPR029033 Histidine phosphatase superfamily NHAM_RS03980 fd9e5daf1f7af0b53ca6e19d53a65625 197 Gene3D G3DSA:3.40.50.1240 1 189 4.3E-45 T 22-04-2016 IPR029033 Histidine phosphatase superfamily NHAM_RS03980 fd9e5daf1f7af0b53ca6e19d53a65625 197 PANTHER PTHR23029 1 188 7.5E-43 T 22-04-2016 NHAM_RS03980 fd9e5daf1f7af0b53ca6e19d53a65625 197 PIRSF PIRSF000709 2 188 2.9E-12 T 22-04-2016 NHAM_RS03980 fd9e5daf1f7af0b53ca6e19d53a65625 197 SMART SM00855 3 163 2.2E-22 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 NHAM_RS14845 657d72714758047803d5494aa8dfb001 260 PANTHER PTHR34266 1 260 4.0E-149 T 22-04-2016 NHAM_RS14845 657d72714758047803d5494aa8dfb001 260 Gene3D G3DSA:3.20.20.70 1 257 6.9E-56 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS14845 657d72714758047803d5494aa8dfb001 260 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 249 8.6E-108 T 22-04-2016 NHAM_RS14845 657d72714758047803d5494aa8dfb001 260 Hamap MF_00443 Thiazole synthase [thiG]. 1 255 42.317 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 NHAM_RS14845 657d72714758047803d5494aa8dfb001 260 SUPERFAMILY SSF110399 1 240 4.32E-83 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 NHAM_RS02705 88dd6fccdda78435a4b38649b769d0b0 193 PANTHER PTHR39321 166 191 2.5E-41 T 22-04-2016 NHAM_RS02705 88dd6fccdda78435a4b38649b769d0b0 193 PANTHER PTHR39321 1 150 2.5E-41 T 22-04-2016 NHAM_RS02705 88dd6fccdda78435a4b38649b769d0b0 193 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 185 1.2E-34 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 NHAM_RS02705 88dd6fccdda78435a4b38649b769d0b0 193 Gene3D G3DSA:3.40.50.620 1 185 9.3E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS02705 88dd6fccdda78435a4b38649b769d0b0 193 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 184 20.401 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 NHAM_RS02705 88dd6fccdda78435a4b38649b769d0b0 193 SUPERFAMILY SSF52374 1 185 9.38E-39 T 22-04-2016 NHAM_RS02705 88dd6fccdda78435a4b38649b769d0b0 193 Pfam PF01467 Cytidylyltransferase-like 5 184 4.8E-19 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NHAM_RS19450 fb9943ac00faf69afbfcd6da26e8c4a3 167 SUPERFAMILY SSF47240 1 156 5.99E-45 T 22-04-2016 IPR009078 Ferritin-like superfamily NHAM_RS19450 fb9943ac00faf69afbfcd6da26e8c4a3 167 Gene3D G3DSA:1.20.1260.10 1 158 6.1E-44 T 22-04-2016 IPR012347 Ferritin-related NHAM_RS19450 fb9943ac00faf69afbfcd6da26e8c4a3 167 PANTHER PTHR30565:SF1 1 159 9.2E-64 T 22-04-2016 NHAM_RS19450 fb9943ac00faf69afbfcd6da26e8c4a3 167 Pfam PF05974 Domain of unknown function (DUF892) 4 157 3.9E-47 T 22-04-2016 IPR010287 Domain of unknown function DUF892 NHAM_RS19450 fb9943ac00faf69afbfcd6da26e8c4a3 167 PANTHER PTHR30565 1 159 9.2E-64 T 22-04-2016 NHAM_RS24005 dcc4fd83127da07735e59591515cf533 216 Pfam PF08241 Methyltransferase domain 42 91 8.0E-6 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NHAM_RS24005 dcc4fd83127da07735e59591515cf533 216 Gene3D G3DSA:3.40.50.150 45 167 1.0E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS24005 dcc4fd83127da07735e59591515cf533 216 SUPERFAMILY SSF53335 44 104 2.99E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS24005 dcc4fd83127da07735e59591515cf533 216 SUPERFAMILY SSF53335 141 161 2.99E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS03180 0d48e424b1d3517a3c2269bc0acb27cf 256 Pfam PF00857 Isochorismatase family 85 246 7.8E-24 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NHAM_RS03180 0d48e424b1d3517a3c2269bc0acb27cf 256 SUPERFAMILY SSF52499 138 252 2.49E-21 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NHAM_RS03180 0d48e424b1d3517a3c2269bc0acb27cf 256 PANTHER PTHR11080 146 252 1.5E-17 T 22-04-2016 NHAM_RS03180 0d48e424b1d3517a3c2269bc0acb27cf 256 Gene3D G3DSA:3.40.50.850 70 253 8.7E-22 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NHAM_RS07455 bf1dd33a16cdcc94564f448b2fd0ddf4 106 Pfam PF01883 Domain of unknown function DUF59 12 82 5.7E-18 T 22-04-2016 IPR002744 Domain of unknown function DUF59 NHAM_RS07455 bf1dd33a16cdcc94564f448b2fd0ddf4 106 PANTHER PTHR13696:SF62 4 100 1.7E-15 T 22-04-2016 NHAM_RS07455 bf1dd33a16cdcc94564f448b2fd0ddf4 106 PANTHER PTHR13696 4 100 1.7E-15 T 22-04-2016 NHAM_RS07455 bf1dd33a16cdcc94564f448b2fd0ddf4 106 SUPERFAMILY SSF117916 9 104 3.27E-30 T 22-04-2016 NHAM_RS14535 63b2cb67ce2fffe2596ae6f6d96e49e3 138 SUPERFAMILY SSF46689 21 134 1.34E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS14535 63b2cb67ce2fffe2596ae6f6d96e49e3 138 Pfam PF13565 Homeodomain-like domain 57 127 1.5E-10 T 22-04-2016 NHAM_RS05855 ccc144a79fd118bdad9878989adb0523 136 Pfam PF11994 Protein of unknown function (DUF3489) 58 122 5.9E-27 T 22-04-2016 IPR021880 Protein of unknown function DUF3489 NHAM_RS00595 1915eae71f7241d961d868afb0fe0a1a 189 PANTHER PTHR35562 4 189 1.5E-39 T 22-04-2016 NHAM_RS00595 1915eae71f7241d961d868afb0fe0a1a 189 Pfam PF01713 Smr domain 100 186 3.2E-23 T 22-04-2016 IPR002625 Smr domain NHAM_RS00595 1915eae71f7241d961d868afb0fe0a1a 189 PANTHER PTHR35562:SF2 4 189 1.5E-39 T 22-04-2016 NHAM_RS00595 1915eae71f7241d961d868afb0fe0a1a 189 SUPERFAMILY SSF160443 97 185 3.27E-14 T 22-04-2016 IPR002625 Smr domain NHAM_RS00595 1915eae71f7241d961d868afb0fe0a1a 189 SMART SM00463 97 186 4.5E-5 T 22-04-2016 IPR002625 Smr domain NHAM_RS08475 86cd0f40f6d536f6714a5066cc1e2ec8 324 Gene3D G3DSA:1.10.530.10 21 77 1.4E-9 T 22-04-2016 NHAM_RS08475 86cd0f40f6d536f6714a5066cc1e2ec8 324 SUPERFAMILY SSF53955 22 86 5.91E-10 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS08475 86cd0f40f6d536f6714a5066cc1e2ec8 324 Pfam PF01464 Transglycosylase SLT domain 23 74 6.4E-6 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 NHAM_RS01860 a1b516f90f48a48f3258e061cf7b083b 265 Pfam PF00005 ABC transporter 29 189 9.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS01860 a1b516f90f48a48f3258e061cf7b083b 265 PANTHER PTHR24220:SF358 136 262 3.0E-110 T 22-04-2016 NHAM_RS01860 a1b516f90f48a48f3258e061cf7b083b 265 SMART SM00382 38 239 1.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS01860 a1b516f90f48a48f3258e061cf7b083b 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 239 261 1.3E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NHAM_RS01860 a1b516f90f48a48f3258e061cf7b083b 265 SUPERFAMILY SSF52540 12 262 1.7E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01860 a1b516f90f48a48f3258e061cf7b083b 265 PANTHER PTHR24220:SF358 15 120 3.0E-110 T 22-04-2016 NHAM_RS01860 a1b516f90f48a48f3258e061cf7b083b 265 PANTHER PTHR24220 136 262 3.0E-110 T 22-04-2016 NHAM_RS01860 a1b516f90f48a48f3258e061cf7b083b 265 PANTHER PTHR24220 15 120 3.0E-110 T 22-04-2016 NHAM_RS01860 a1b516f90f48a48f3258e061cf7b083b 265 Gene3D G3DSA:3.40.50.300 11 260 3.9E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02185 1a698bc7bfb0a7fc86eb0a899ae4d25c 169 PANTHER PTHR36505 52 166 1.6E-34 T 22-04-2016 NHAM_RS02185 1a698bc7bfb0a7fc86eb0a899ae4d25c 169 PANTHER PTHR36505:SF2 52 166 1.6E-34 T 22-04-2016 NHAM_RS02185 1a698bc7bfb0a7fc86eb0a899ae4d25c 169 Gene3D G3DSA:2.30.30.240 68 121 1.1E-9 T 22-04-2016 NHAM_RS02185 1a698bc7bfb0a7fc86eb0a899ae4d25c 169 Pfam PF05239 PRC-barrel domain 68 133 1.1E-10 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS02185 1a698bc7bfb0a7fc86eb0a899ae4d25c 169 SUPERFAMILY SSF50346 49 153 2.16E-16 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS15985 0536cddb1ff9d976527d8dac2b203ac5 381 Pfam PF14284 PcfJ-like protein 265 326 5.4E-11 T 22-04-2016 IPR025586 PcfJ-like protein NHAM_RS16900 143ec4cb1f48976dfda2ec411f88f5e0 480 PANTHER PTHR30203 10 480 1.3E-73 T 22-04-2016 NHAM_RS16900 143ec4cb1f48976dfda2ec411f88f5e0 480 PANTHER PTHR30203:SF9 10 480 1.3E-73 T 22-04-2016 NHAM_RS16900 143ec4cb1f48976dfda2ec411f88f5e0 480 SUPERFAMILY SSF56954 55 469 5.1E-88 T 22-04-2016 NHAM_RS16900 143ec4cb1f48976dfda2ec411f88f5e0 480 SUPERFAMILY SSF56954 4 26 5.1E-88 T 22-04-2016 NHAM_RS16900 143ec4cb1f48976dfda2ec411f88f5e0 480 Gene3D G3DSA:1.20.1600.10 52 469 4.6E-89 T 22-04-2016 NHAM_RS16900 143ec4cb1f48976dfda2ec411f88f5e0 480 Pfam PF02321 Outer membrane efflux protein 64 255 3.4E-13 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NHAM_RS16900 143ec4cb1f48976dfda2ec411f88f5e0 480 Pfam PF02321 Outer membrane efflux protein 285 464 2.8E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NHAM_RS16900 143ec4cb1f48976dfda2ec411f88f5e0 480 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 7 466 9.4E-122 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NHAM_RS00045 9ad20d97939428c8beaaf2cadf43651c 306 Pfam PF02678 Pirin 35 140 1.5E-33 T 22-04-2016 IPR003829 Pirin, N-terminal domain NHAM_RS00045 9ad20d97939428c8beaaf2cadf43651c 306 PANTHER PTHR13903:SF4 18 306 1.8E-138 T 22-04-2016 NHAM_RS00045 9ad20d97939428c8beaaf2cadf43651c 306 Gene3D G3DSA:2.60.120.10 32 264 5.3E-65 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS00045 9ad20d97939428c8beaaf2cadf43651c 306 PIRSF PIRSF006232 17 299 2.6E-89 T 22-04-2016 IPR012093 Pirin NHAM_RS00045 9ad20d97939428c8beaaf2cadf43651c 306 Pfam PF05726 Pirin C-terminal cupin domain 193 292 2.2E-28 T 22-04-2016 IPR008778 Pirin, C-terminal domain NHAM_RS00045 9ad20d97939428c8beaaf2cadf43651c 306 PANTHER PTHR13903 18 306 1.8E-138 T 22-04-2016 IPR012093 Pirin NHAM_RS00045 9ad20d97939428c8beaaf2cadf43651c 306 SUPERFAMILY SSF51182 32 303 3.29E-82 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS09780 f9aadcab2409d1adef179a3d4a395019 157 SUPERFAMILY SSF49764 24 154 1.29E-40 T 22-04-2016 IPR008978 HSP20-like chaperone NHAM_RS09780 f9aadcab2409d1adef179a3d4a395019 157 Gene3D G3DSA:2.60.40.790 18 154 7.4E-46 T 22-04-2016 IPR008978 HSP20-like chaperone NHAM_RS09780 f9aadcab2409d1adef179a3d4a395019 157 PANTHER PTHR11527:SF118 17 154 1.9E-41 T 22-04-2016 NHAM_RS09780 f9aadcab2409d1adef179a3d4a395019 157 PANTHER PTHR11527 17 154 1.9E-41 T 22-04-2016 IPR031107 Small heat shock protein HSP20 NHAM_RS09780 f9aadcab2409d1adef179a3d4a395019 157 Pfam PF00011 Hsp20/alpha crystallin family 55 153 1.7E-25 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain NHAM_RS03965 891ebe3b97698967b6507d659834486d 132 Pfam PF16998 17 kDa outer membrane surface antigen 20 129 2.6E-35 T 22-04-2016 IPR032635 Surface antigen domain NHAM_RS19060 2358c09c91a1877d4d84abe0402a2ddf 519 Pfam PF07715 TonB-dependent Receptor Plug Domain 114 215 9.3E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS19060 2358c09c91a1877d4d84abe0402a2ddf 519 SUPERFAMILY SSF56935 98 516 7.33E-69 T 22-04-2016 NHAM_RS19060 2358c09c91a1877d4d84abe0402a2ddf 519 PANTHER PTHR32552 39 424 1.3E-43 T 22-04-2016 NHAM_RS19060 2358c09c91a1877d4d84abe0402a2ddf 519 Gene3D G3DSA:2.170.130.10 105 222 1.1E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS19060 2358c09c91a1877d4d84abe0402a2ddf 519 Gene3D G3DSA:2.40.170.20 234 516 2.2E-45 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS15065 a5c90996a6ed9009cea42c5637e621bc 179 SUPERFAMILY SSF55068 4 162 3.27E-64 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NHAM_RS15065 a5c90996a6ed9009cea42c5637e621bc 179 Gene3D G3DSA:3.30.1060.10 4 159 6.3E-65 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NHAM_RS15065 a5c90996a6ed9009cea42c5637e621bc 179 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 160 33.364 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NHAM_RS15065 a5c90996a6ed9009cea42c5637e621bc 179 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 7 154 3.8E-49 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NHAM_RS15065 a5c90996a6ed9009cea42c5637e621bc 179 PANTHER PTHR10173 4 154 1.8E-65 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 NHAM_RS15065 a5c90996a6ed9009cea42c5637e621bc 179 Pfam PF01625 Peptide methionine sulfoxide reductase 8 154 1.7E-55 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 NHAM_RS15065 a5c90996a6ed9009cea42c5637e621bc 179 PANTHER PTHR10173:SF6 4 154 1.8E-65 T 22-04-2016 NHAM_RS01420 74605cc253731eace781896c1d6e8a3f 173 SUPERFAMILY SSF53041 4 154 1.7E-25 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS01420 74605cc253731eace781896c1d6e8a3f 173 Gene3D G3DSA:3.40.50.1390 4 135 3.4E-16 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS01420 74605cc253731eace781896c1d6e8a3f 173 SMART SM00857 5 155 6.9E-33 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS01420 74605cc253731eace781896c1d6e8a3f 173 PANTHER PTHR30461 4 169 2.5E-28 T 22-04-2016 NHAM_RS01420 74605cc253731eace781896c1d6e8a3f 173 Pfam PF00239 Resolvase, N terminal domain 5 154 5.2E-25 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS01420 74605cc253731eace781896c1d6e8a3f 173 PANTHER PTHR30461:SF3 4 169 2.5E-28 T 22-04-2016 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 PIRSF PIRSF000429 1 395 2.4E-115 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 Pfam PF00108 Thiolase, N-terminal domain 5 263 2.4E-61 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 SUPERFAMILY SSF53901 272 393 7.53E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 Gene3D G3DSA:3.40.47.10 186 275 7.5E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 Gene3D G3DSA:3.40.47.10 4 125 7.5E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 PANTHER PTHR18919:SF14 1 395 6.3E-259 T 22-04-2016 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 Pfam PF02803 Thiolase, C-terminal domain 271 392 1.2E-43 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 Gene3D G3DSA:3.40.47.10 145 185 8.1E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 Gene3D G3DSA:3.40.47.10 278 393 8.1E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 SUPERFAMILY SSF53901 1 266 3.51E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 PANTHER PTHR18919 1 395 6.3E-259 T 22-04-2016 NHAM_RS01870 2a904b42230b68187e37a3975085f0f1 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 392 5.1E-126 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 NHAM_RS09495 c0c32c421d2594f43c96d2cc5380961d 331 Pfam PF13401 AAA domain 49 189 7.7E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS09495 c0c32c421d2594f43c96d2cc5380961d 331 SUPERFAMILY SSF52540 32 221 1.07E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS09495 c0c32c421d2594f43c96d2cc5380961d 331 Gene3D G3DSA:3.40.50.300 47 180 5.6E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10765 ad68566ef0bb8175fcfaaebf9a97844f 180 PIRSF PIRSF000847 1 180 1.8E-45 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 NHAM_RS10765 ad68566ef0bb8175fcfaaebf9a97844f 180 PANTHER PTHR14269 3 174 9.4E-36 T 22-04-2016 NHAM_RS10765 ad68566ef0bb8175fcfaaebf9a97844f 180 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 66 1.4E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NHAM_RS04310 1738ad94fabf4538f2f8ce69bc0adf52 174 PANTHER PTHR38009 6 160 1.2E-39 T 22-04-2016 NHAM_RS04310 1738ad94fabf4538f2f8ce69bc0adf52 174 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 12 158 3.4E-42 T 22-04-2016 IPR011747 Conserved hypothetical protein CHP02241 NHAM_RS04310 1738ad94fabf4538f2f8ce69bc0adf52 174 Pfam PF06841 T4-like virus tail tube protein gp19 15 157 6.7E-44 T 22-04-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 NHAM_RS04310 1738ad94fabf4538f2f8ce69bc0adf52 174 PANTHER PTHR38009:SF1 6 160 1.2E-39 T 22-04-2016 NHAM_RS03805 8e2381dbb7160b30d1b580f5b957784e 352 Pfam PF05137 Fimbrial assembly protein (PilN) 272 343 1.9E-9 T 22-04-2016 IPR007813 Fimbrial assembly PilN NHAM_RS03805 8e2381dbb7160b30d1b580f5b957784e 352 PANTHER PTHR40278 67 342 5.6E-22 T 22-04-2016 NHAM_RS03805 8e2381dbb7160b30d1b580f5b957784e 352 PANTHER PTHR40278:SF1 67 342 5.6E-22 T 22-04-2016 NHAM_RS20275 3309689c793a5a0b25a36b236750fa04 159 Pfam PF04120 Low affinity iron permease 24 145 4.0E-52 T 22-04-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 NHAM_RS06640 1f85e2cd37aec83e5d4edc7f78a81e95 319 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 9 296 5.3E-44 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD NHAM_RS06640 1f85e2cd37aec83e5d4edc7f78a81e95 319 PANTHER PTHR40277 1 309 8.2E-61 T 22-04-2016 NHAM_RS06400 8329c18a3702a5b66c03d145cd1cff5d 92 Pfam PF07045 Domain of unknown function (DUF1330) 3 90 2.1E-15 T 22-04-2016 IPR010753 Domain of unknown function DUF1330 NHAM_RS06400 8329c18a3702a5b66c03d145cd1cff5d 92 Gene3D G3DSA:3.30.70.900 3 90 2.1E-15 T 22-04-2016 NHAM_RS06400 8329c18a3702a5b66c03d145cd1cff5d 92 SUPERFAMILY SSF54909 4 90 3.49E-11 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel NHAM_RS06130 4a3aa3c393e0deaf10ba38ae895c62e1 206 SUPERFAMILY SSF53335 28 167 2.43E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS06130 4a3aa3c393e0deaf10ba38ae895c62e1 206 TIGRFAM TIGR03587 Pse_Me-ase: pseudaminic acid biosynthesis-associated methylase 4 205 2.1E-100 T 22-04-2016 IPR020027 Pseudaminic acid biosynthesis-associated methyltransferase NHAM_RS16240 e4f55f2708dc2fecd5a17de8d36fbaf9 139 SUPERFAMILY SSF75620 6 105 2.59E-13 T 22-04-2016 NHAM_RS16240 e4f55f2708dc2fecd5a17de8d36fbaf9 139 PANTHER PTHR11075 7 134 9.0E-37 T 22-04-2016 NHAM_RS16240 e4f55f2708dc2fecd5a17de8d36fbaf9 139 Pfam PF00472 RF-1 domain 5 132 2.1E-27 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NHAM_RS16240 e4f55f2708dc2fecd5a17de8d36fbaf9 139 Gene3D G3DSA:3.30.160.200 2 107 2.6E-33 T 22-04-2016 NHAM_RS15355 0be01a7e5ca85e871366db6c7ebbd5eb 115 Pfam PF05717 IS66 Orf2 like protein 9 106 3.5E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 NHAM_RS15355 0be01a7e5ca85e871366db6c7ebbd5eb 115 PANTHER PTHR36455 2 107 3.7E-44 T 22-04-2016 NHAM_RS15355 0be01a7e5ca85e871366db6c7ebbd5eb 115 PANTHER PTHR36455:SF1 2 107 3.7E-44 T 22-04-2016 NHAM_RS02335 882e2fc07cca7126576b4625e3baad95 333 PANTHER PTHR41251:SF1 4 306 4.9E-51 T 22-04-2016 NHAM_RS02335 882e2fc07cca7126576b4625e3baad95 333 SMART SM00559 55 185 3.5E-18 T 22-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 NHAM_RS02335 882e2fc07cca7126576b4625e3baad95 333 PIRSF PIRSF006493 1 332 2.8E-102 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NHAM_RS02335 882e2fc07cca7126576b4625e3baad95 333 TIGRFAM TIGR02772 Ku_bact: Ku protein 4 257 2.3E-93 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NHAM_RS02335 882e2fc07cca7126576b4625e3baad95 333 Pfam PF02735 Ku70/Ku80 beta-barrel domain 14 194 4.0E-34 T 22-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 NHAM_RS02335 882e2fc07cca7126576b4625e3baad95 333 SUPERFAMILY SSF100939 3 256 1.67E-55 T 22-04-2016 IPR016194 SPOC-like, C-terminal domain NHAM_RS02335 882e2fc07cca7126576b4625e3baad95 333 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 3 256 31.209 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NHAM_RS02335 882e2fc07cca7126576b4625e3baad95 333 Gene3D G3DSA:2.40.290.10 5 152 2.1E-9 T 22-04-2016 IPR016194 SPOC-like, C-terminal domain NHAM_RS02335 882e2fc07cca7126576b4625e3baad95 333 PANTHER PTHR41251 4 306 4.9E-51 T 22-04-2016 NHAM_RS13210 abe4441cbefbb423d1be1d115c7a88cb 81 Gene3D G3DSA:2.60.260.40 1 80 1.3E-29 T 22-04-2016 IPR019401 Zinc finger, CHCC-type NHAM_RS13210 abe4441cbefbb423d1be1d115c7a88cb 81 Pfam PF10276 Zinc-finger domain 23 58 9.3E-12 T 22-04-2016 IPR019401 Zinc finger, CHCC-type NHAM_RS19495 123278d12af5f55e7674cb42ec16681b 146 PANTHER PTHR33217:SF1 13 146 4.2E-52 T 22-04-2016 NHAM_RS19495 123278d12af5f55e7674cb42ec16681b 146 PANTHER PTHR33217 13 146 4.2E-52 T 22-04-2016 NHAM_RS19495 123278d12af5f55e7674cb42ec16681b 146 Pfam PF00872 Transposase, Mutator family 11 145 5.2E-27 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS19495 123278d12af5f55e7674cb42ec16681b 146 ProSitePatterns PS01007 Transposases, Mutator family, signature. 40 64 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS19705 f476d061bafbb3fa9dcce438217b16dc 123 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 19 109 1.5E-20 T 22-04-2016 IPR009241 Toxin HigB-like NHAM_RS09010 0a5ef839f11672662583ca24f361d9b2 207 Pfam PF01914 MarC family integral membrane protein 7 206 8.6E-49 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 NHAM_RS09010 0a5ef839f11672662583ca24f361d9b2 207 PANTHER PTHR33508 2 206 6.1E-57 T 22-04-2016 NHAM_RS09010 0a5ef839f11672662583ca24f361d9b2 207 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 201 8.5E-47 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 NHAM_RS09010 0a5ef839f11672662583ca24f361d9b2 207 PANTHER PTHR33508:SF1 2 206 6.1E-57 T 22-04-2016 NHAM_RS05395 a7ddd0d771dcf2fe5f9f020a831eabae 291 PANTHER PTHR22572:SF105 2 268 1.2E-161 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NHAM_RS05395 a7ddd0d771dcf2fe5f9f020a831eabae 291 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 285 3.8E-142 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NHAM_RS05395 a7ddd0d771dcf2fe5f9f020a831eabae 291 Gene3D G3DSA:3.90.550.10 1 261 2.8E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS05395 a7ddd0d771dcf2fe5f9f020a831eabae 291 Pfam PF00483 Nucleotidyl transferase 2 237 9.2E-68 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NHAM_RS05395 a7ddd0d771dcf2fe5f9f020a831eabae 291 PANTHER PTHR22572 2 268 1.2E-161 T 22-04-2016 NHAM_RS05395 a7ddd0d771dcf2fe5f9f020a831eabae 291 SUPERFAMILY SSF53448 1 284 1.09E-87 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS05370 43de9fc7c830540e3e9c7f92440e9f08 734 PANTHER PTHR41244 102 625 2.5E-98 T 22-04-2016 NHAM_RS05370 43de9fc7c830540e3e9c7f92440e9f08 734 Pfam PF14307 Glycosyltransferase WbsX 198 532 1.4E-125 T 22-04-2016 IPR032719 Glycosyltransferase WbsX NHAM_RS05370 43de9fc7c830540e3e9c7f92440e9f08 734 PANTHER PTHR41244:SF1 102 625 2.5E-98 T 22-04-2016 NHAM_RS16655 caf2478528541f0444e004a45be270a8 346 PIRSF PIRSF002849 11 346 2.1E-115 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted NHAM_RS16655 caf2478528541f0444e004a45be270a8 346 PANTHER PTHR11603:SF156 19 338 9.0E-109 T 22-04-2016 NHAM_RS16655 caf2478528541f0444e004a45be270a8 346 SUPERFAMILY SSF52540 36 323 1.25E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16655 caf2478528541f0444e004a45be270a8 346 PANTHER PTHR11603 19 338 9.0E-109 T 22-04-2016 NHAM_RS16655 caf2478528541f0444e004a45be270a8 346 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 67 200 2.2E-59 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 NHAM_RS16655 caf2478528541f0444e004a45be270a8 346 Gene3D G3DSA:1.10.8.300 232 341 5.3E-28 T 22-04-2016 NHAM_RS16655 caf2478528541f0444e004a45be270a8 346 Gene3D G3DSA:3.40.50.300 49 216 3.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13930 f7fbb28ad402a112421d34309b19a67a 263 SMART SM00382 34 221 7.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS13930 f7fbb28ad402a112421d34309b19a67a 263 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS13930 f7fbb28ad402a112421d34309b19a67a 263 SUPERFAMILY SSF52540 7 244 4.13E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13930 f7fbb28ad402a112421d34309b19a67a 263 Gene3D G3DSA:3.40.50.300 3 238 4.2E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13930 f7fbb28ad402a112421d34309b19a67a 263 PANTHER PTHR24220 9 253 8.8E-117 T 22-04-2016 NHAM_RS13930 f7fbb28ad402a112421d34309b19a67a 263 Pfam PF00005 ABC transporter 26 171 1.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS13930 f7fbb28ad402a112421d34309b19a67a 263 PANTHER PTHR24220:SF434 9 253 8.8E-117 T 22-04-2016 NHAM_RS10760 1138271eff7a45703fcae9aba3ad5a89 226 SUPERFAMILY SSF52540 23 203 1.24E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10760 1138271eff7a45703fcae9aba3ad5a89 226 Gene3D G3DSA:1.10.8.60 160 223 2.3E-10 T 22-04-2016 NHAM_RS10760 1138271eff7a45703fcae9aba3ad5a89 226 PANTHER PTHR30050 4 224 8.2E-58 T 22-04-2016 NHAM_RS10760 1138271eff7a45703fcae9aba3ad5a89 226 PANTHER PTHR30050:SF5 4 224 8.2E-58 T 22-04-2016 NHAM_RS10760 1138271eff7a45703fcae9aba3ad5a89 226 Gene3D G3DSA:3.40.50.300 5 154 2.3E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10760 1138271eff7a45703fcae9aba3ad5a89 226 Pfam PF00308 Bacterial dnaA protein 106 204 1.7E-7 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA NHAM_RS07450 8b687a868c3818819c93e0f006b0560c 175 SUPERFAMILY SSF64307 85 167 3.92E-12 T 22-04-2016 IPR001455 TusA-like domain NHAM_RS07450 8b687a868c3818819c93e0f006b0560c 175 Gene3D G3DSA:3.30.110.40 95 168 7.4E-7 T 22-04-2016 IPR001455 TusA-like domain NHAM_RS07450 8b687a868c3818819c93e0f006b0560c 175 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 102 167 5.6E-15 T 22-04-2016 IPR018720 Domain of unknown function DUF2249 NHAM_RS07450 8b687a868c3818819c93e0f006b0560c 175 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 8 74 2.3E-18 T 22-04-2016 IPR018720 Domain of unknown function DUF2249 NHAM_RS17850 032b3f02205b85b47ee2fcc2bedfda64 227 Gene3D G3DSA:3.40.30.10 33 225 5.9E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS17850 032b3f02205b85b47ee2fcc2bedfda64 227 PANTHER PTHR10681:SF68 84 200 3.2E-15 T 22-04-2016 NHAM_RS17850 032b3f02205b85b47ee2fcc2bedfda64 227 ProSitePatterns PS00194 Thioredoxin family active site. 110 128 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 NHAM_RS17850 032b3f02205b85b47ee2fcc2bedfda64 227 PANTHER PTHR10681 84 200 3.2E-15 T 22-04-2016 NHAM_RS17850 032b3f02205b85b47ee2fcc2bedfda64 227 Pfam PF08534 Redoxin 85 217 6.9E-24 T 22-04-2016 IPR013740 Redoxin GO:0016491 NHAM_RS17850 032b3f02205b85b47ee2fcc2bedfda64 227 SUPERFAMILY SSF52833 72 223 1.07E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS19235 8f6b631eebbc6a24c9415c76c30a66a9 488 Gene3D G3DSA:3.30.70.150 27 153 5.3E-63 T 22-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NHAM_RS19235 8f6b631eebbc6a24c9415c76c30a66a9 488 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 13 479 58.549 T 22-04-2016 IPR020888 Ribulose bisphosphate carboxylase, large subunit GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NHAM_RS19235 8f6b631eebbc6a24c9415c76c30a66a9 488 SUPERFAMILY SSF51649 155 481 3.53E-144 T 22-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NHAM_RS19235 8f6b631eebbc6a24c9415c76c30a66a9 488 SUPERFAMILY SSF54966 14 154 8.38E-60 T 22-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NHAM_RS19235 8f6b631eebbc6a24c9415c76c30a66a9 488 PANTHER PTHR23321 30 459 2.7E-237 T 22-04-2016 NHAM_RS19235 8f6b631eebbc6a24c9415c76c30a66a9 488 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 201 209 - T 22-04-2016 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NHAM_RS19235 8f6b631eebbc6a24c9415c76c30a66a9 488 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 159 466 4.2E-133 T 22-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NHAM_RS19235 8f6b631eebbc6a24c9415c76c30a66a9 488 PANTHER PTHR23321:SF19 30 459 2.7E-237 T 22-04-2016 NHAM_RS19235 8f6b631eebbc6a24c9415c76c30a66a9 488 Gene3D G3DSA:3.20.20.110 154 466 6.8E-159 T 22-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NHAM_RS19235 8f6b631eebbc6a24c9415c76c30a66a9 488 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 29 149 5.7E-46 T 22-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 NHAM_RS11025 e6f4e54d01df0b28afc9d41f0b67483d 99 SUPERFAMILY SSF54975 4 80 3.92E-26 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NHAM_RS11025 e6f4e54d01df0b28afc9d41f0b67483d 99 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NHAM_RS11025 e6f4e54d01df0b28afc9d41f0b67483d 99 Pfam PF00708 Acylphosphatase 7 84 9.4E-24 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NHAM_RS11025 e6f4e54d01df0b28afc9d41f0b67483d 99 PANTHER PTHR10029 8 75 1.5E-28 T 22-04-2016 NHAM_RS11025 e6f4e54d01df0b28afc9d41f0b67483d 99 Gene3D G3DSA:3.30.70.100 6 82 1.2E-27 T 22-04-2016 NHAM_RS11025 e6f4e54d01df0b28afc9d41f0b67483d 99 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NHAM_RS11025 e6f4e54d01df0b28afc9d41f0b67483d 99 PRINTS PR00112 Acylphosphatase signature 26 51 1.6E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NHAM_RS11025 e6f4e54d01df0b28afc9d41f0b67483d 99 PRINTS PR00112 Acylphosphatase signature 5 20 1.6E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NHAM_RS09560 261fa209b16e8be0ed084c04bd6f0372 296 Pfam PF07485 Domain of Unknown Function (DUF1259) 28 146 3.1E-41 T 22-04-2016 IPR011094 Uncharacterised protein family, LppY/LpqO NHAM_RS09560 261fa209b16e8be0ed084c04bd6f0372 296 Pfam PF07485 Domain of Unknown Function (DUF1259) 170 290 3.8E-46 T 22-04-2016 IPR011094 Uncharacterised protein family, LppY/LpqO NHAM_RS03005 6756916e4212679af8933e35172ea04c 108 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 7 87 1.7E-29 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 NHAM_RS03005 6756916e4212679af8933e35172ea04c 108 PANTHER PTHR36924:SF2 6 90 1.9E-20 T 22-04-2016 NHAM_RS03005 6756916e4212679af8933e35172ea04c 108 Pfam PF01381 Helix-turn-helix 21 72 1.0E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS03005 6756916e4212679af8933e35172ea04c 108 Gene3D G3DSA:1.10.260.40 5 90 2.3E-30 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS03005 6756916e4212679af8933e35172ea04c 108 SMART SM00530 16 72 2.3E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS03005 6756916e4212679af8933e35172ea04c 108 PANTHER PTHR36924 6 90 1.9E-20 T 22-04-2016 NHAM_RS03005 6756916e4212679af8933e35172ea04c 108 SUPERFAMILY SSF47413 12 91 3.25E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS08640 9ef458b63bc6e6023b585699e7d0e21f 135 Pfam PF01609 Transposase DDE domain 23 124 1.1E-10 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS08880 3624b96beb21ea19965b8f6047714ab6 130 PANTHER PTHR34182 2 123 2.6E-24 T 22-04-2016 NHAM_RS08880 3624b96beb21ea19965b8f6047714ab6 130 Pfam PF03840 Preprotein translocase SecG subunit 4 68 1.6E-16 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 NHAM_RS08880 3624b96beb21ea19965b8f6047714ab6 130 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 69 1.2E-18 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 NHAM_RS08880 3624b96beb21ea19965b8f6047714ab6 130 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.4E-6 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 NHAM_RS08880 3624b96beb21ea19965b8f6047714ab6 130 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.4E-6 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 NHAM_RS08850 612e201342732f7e32dfc61465b91f0d 130 Pfam PF03779 SPW repeat 63 106 4.7E-10 T 22-04-2016 IPR005530 SPW repeat NHAM_RS03905 f49413c44e35caa41e4b97dc68e95c73 315 SUPERFAMILY SSF56281 23 293 4.87E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS03905 f49413c44e35caa41e4b97dc68e95c73 315 Gene3D G3DSA:3.60.15.10 20 247 1.9E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS03905 f49413c44e35caa41e4b97dc68e95c73 315 PANTHER PTHR23131:SF4 23 301 4.5E-99 T 22-04-2016 NHAM_RS03905 f49413c44e35caa41e4b97dc68e95c73 315 SMART SM00849 45 221 2.0E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS03905 f49413c44e35caa41e4b97dc68e95c73 315 Pfam PF00753 Metallo-beta-lactamase superfamily 43 221 1.0E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS03905 f49413c44e35caa41e4b97dc68e95c73 315 PANTHER PTHR23131 23 301 4.5E-99 T 22-04-2016 NHAM_RS17815 e45642287d40e7ec1bee598ff496d5d1 112 PANTHER PTHR13696:SF62 2 110 3.3E-18 T 22-04-2016 NHAM_RS17815 e45642287d40e7ec1bee598ff496d5d1 112 PANTHER PTHR13696 2 110 3.3E-18 T 22-04-2016 NHAM_RS17815 e45642287d40e7ec1bee598ff496d5d1 112 Pfam PF01883 Domain of unknown function DUF59 19 89 2.1E-19 T 22-04-2016 IPR002744 Domain of unknown function DUF59 NHAM_RS17815 e45642287d40e7ec1bee598ff496d5d1 112 SUPERFAMILY SSF117916 17 110 7.52E-30 T 22-04-2016 NHAM_RS02465 8040bec4b90d1656fb7f84583b5ac96d 146 SUPERFAMILY SSF103481 51 145 3.01E-20 T 22-04-2016 NHAM_RS02465 8040bec4b90d1656fb7f84583b5ac96d 146 PANTHER PTHR22911 9 143 2.5E-24 T 22-04-2016 NHAM_RS02465 8040bec4b90d1656fb7f84583b5ac96d 146 Pfam PF00892 EamA-like transporter family 8 143 2.0E-24 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 NHAM_RS14240 b5cd37093db2d33a3e24d8bb6bf43cfc 320 Gene3D G3DSA:3.40.50.720 4 183 1.6E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14240 b5cd37093db2d33a3e24d8bb6bf43cfc 320 Pfam PF16363 GDP-mannose 4,6 dehydratase 47 307 6.5E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14240 b5cd37093db2d33a3e24d8bb6bf43cfc 320 Gene3D G3DSA:3.90.25.10 184 311 1.7E-21 T 22-04-2016 NHAM_RS14240 b5cd37093db2d33a3e24d8bb6bf43cfc 320 SUPERFAMILY SSF51735 4 313 3.58E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14240 b5cd37093db2d33a3e24d8bb6bf43cfc 320 PANTHER PTHR10366 4 316 1.7E-45 T 22-04-2016 NHAM_RS14240 b5cd37093db2d33a3e24d8bb6bf43cfc 320 PANTHER PTHR10366:SF427 4 316 1.7E-45 T 22-04-2016 NHAM_RS00345 839f68ac42679b6d80008762ce58a14c 300 SUPERFAMILY SSF54001 36 232 7.16E-26 T 22-04-2016 NHAM_RS00345 839f68ac42679b6d80008762ce58a14c 300 Gene3D G3DSA:2.30.30.330 36 230 3.6E-21 T 22-04-2016 NHAM_RS00345 839f68ac42679b6d80008762ce58a14c 300 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 38 140 2.2E-9 T 22-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family NHAM_RS11855 92ca0ef2e9e7a8d638c5f2639fbfafc9 249 Gene3D G3DSA:3.40.50.300 2 242 1.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11855 92ca0ef2e9e7a8d638c5f2639fbfafc9 249 PANTHER PTHR24220:SF85 5 243 3.4E-119 T 22-04-2016 NHAM_RS11855 92ca0ef2e9e7a8d638c5f2639fbfafc9 249 PANTHER PTHR24220 5 243 3.4E-119 T 22-04-2016 NHAM_RS11855 92ca0ef2e9e7a8d638c5f2639fbfafc9 249 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 245 4.4E-106 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 NHAM_RS11855 92ca0ef2e9e7a8d638c5f2639fbfafc9 249 SUPERFAMILY SSF52540 2 233 2.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS11855 92ca0ef2e9e7a8d638c5f2639fbfafc9 249 Pfam PF00005 ABC transporter 19 174 8.2E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS11855 92ca0ef2e9e7a8d638c5f2639fbfafc9 249 SMART SM00382 28 225 5.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS12525 154d5b5f0ad2f8482ccfaf4b395b97a2 158 PANTHER PTHR21569:SF1 26 158 9.1E-64 T 22-04-2016 NHAM_RS12525 154d5b5f0ad2f8482ccfaf4b395b97a2 158 PANTHER PTHR21569 26 158 9.1E-64 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 NHAM_RS12525 154d5b5f0ad2f8482ccfaf4b395b97a2 158 SUPERFAMILY SSF54211 33 158 4.17E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold NHAM_RS12525 154d5b5f0ad2f8482ccfaf4b395b97a2 158 ProSitePatterns PS00360 Ribosomal protein S9 signature. 97 115 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 NHAM_RS12525 154d5b5f0ad2f8482ccfaf4b395b97a2 158 Gene3D G3DSA:3.30.230.10 33 158 1.5E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NHAM_RS12525 154d5b5f0ad2f8482ccfaf4b395b97a2 158 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 29 158 32.287 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid NHAM_RS12525 154d5b5f0ad2f8482ccfaf4b395b97a2 158 Pfam PF00380 Ribosomal protein S9/S16 38 158 1.2E-46 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 NHAM_RS02945 573fb58ad96784470f66a79ebd4a1062 130 PANTHER PTHR34873 4 130 4.4E-12 T 22-04-2016 NHAM_RS02945 573fb58ad96784470f66a79ebd4a1062 130 PANTHER PTHR34873:SF2 4 130 4.4E-12 T 22-04-2016 NHAM_RS02945 573fb58ad96784470f66a79ebd4a1062 130 SUPERFAMILY SSF143100 2 67 3.79E-21 T 22-04-2016 NHAM_RS02945 573fb58ad96784470f66a79ebd4a1062 130 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 4 124 3.9E-40 T 22-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system NHAM_RS02945 573fb58ad96784470f66a79ebd4a1062 130 SUPERFAMILY SSF47598 91 127 3.41E-6 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 NHAM_RS02945 573fb58ad96784470f66a79ebd4a1062 130 Gene3D G3DSA:1.10.1220.10 91 123 3.6E-4 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 NHAM_RS18000 9b0b233830b7ef053386cf5c5be999e2 345 SUPERFAMILY SSF52402 22 216 6.17E-53 T 22-04-2016 NHAM_RS18000 9b0b233830b7ef053386cf5c5be999e2 345 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 27 207 1.7E-48 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NHAM_RS18000 9b0b233830b7ef053386cf5c5be999e2 345 PANTHER PTHR11807:SF2 25 241 1.2E-67 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NHAM_RS18000 9b0b233830b7ef053386cf5c5be999e2 345 Gene3D G3DSA:3.40.50.620 26 191 7.6E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS18000 9b0b233830b7ef053386cf5c5be999e2 345 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 14 319 20.794 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NHAM_RS18000 9b0b233830b7ef053386cf5c5be999e2 345 PANTHER PTHR11807 25 241 1.2E-67 T 22-04-2016 NHAM_RS18000 9b0b233830b7ef053386cf5c5be999e2 345 Pfam PF01171 PP-loop family 27 207 5.3E-53 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal NHAM_RS10230 e08300fc1b1a8eddd99937ef83624ebc 346 PANTHER PTHR11669 1 237 1.4E-52 T 22-04-2016 NHAM_RS10230 e08300fc1b1a8eddd99937ef83624ebc 346 Gene3D G3DSA:3.40.50.300 20 188 1.2E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10230 e08300fc1b1a8eddd99937ef83624ebc 346 Pfam PF13177 DNA polymerase III, delta subunit 26 198 5.8E-30 T 22-04-2016 NHAM_RS10230 e08300fc1b1a8eddd99937ef83624ebc 346 PANTHER PTHR11669:SF8 1 237 1.4E-52 T 22-04-2016 NHAM_RS10230 e08300fc1b1a8eddd99937ef83624ebc 346 Gene3D G3DSA:1.10.8.60 189 237 1.8E-6 T 22-04-2016 NHAM_RS10230 e08300fc1b1a8eddd99937ef83624ebc 346 SUPERFAMILY SSF52540 21 238 2.94E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16815 8d3f330d6d55f20919f70d7544647cdf 118 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 110 9.1E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS16815 8d3f330d6d55f20919f70d7544647cdf 118 Gene3D G3DSA:1.10.760.10 20 113 4.6E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS16815 8d3f330d6d55f20919f70d7544647cdf 118 SUPERFAMILY SSF46626 1 114 2.29E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS06765 5b27a63c417a489055621b75d4990516 368 PANTHER PTHR34697 8 331 3.5E-98 T 22-04-2016 NHAM_RS06765 5b27a63c417a489055621b75d4990516 368 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 21 308 2.3E-7 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD NHAM_RS16415 a0ee1e505a006af9cf53b782cabb5b50 430 SUPERFAMILY SSF55103 198 426 3.49E-21 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NHAM_RS16415 a0ee1e505a006af9cf53b782cabb5b50 430 Gene3D G3DSA:3.30.465.10 58 182 5.2E-19 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NHAM_RS16415 a0ee1e505a006af9cf53b782cabb5b50 430 SUPERFAMILY SSF56176 5 182 1.36E-33 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NHAM_RS16415 a0ee1e505a006af9cf53b782cabb5b50 430 PANTHER PTHR11748:SF1 2 217 2.7E-113 T 22-04-2016 NHAM_RS16415 a0ee1e505a006af9cf53b782cabb5b50 430 PANTHER PTHR11748:SF1 235 430 2.7E-113 T 22-04-2016 NHAM_RS16415 a0ee1e505a006af9cf53b782cabb5b50 430 PANTHER PTHR11748 2 217 2.7E-113 T 22-04-2016 NHAM_RS16415 a0ee1e505a006af9cf53b782cabb5b50 430 PANTHER PTHR11748 235 430 2.7E-113 T 22-04-2016 NHAM_RS16415 a0ee1e505a006af9cf53b782cabb5b50 430 Pfam PF01565 FAD binding domain 4 141 2.0E-15 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NHAM_RS04245 a8399b04398af17c5927e67dfc6180d2 115 PANTHER PTHR35862 1 102 3.9E-15 T 22-04-2016 NHAM_RS04245 a8399b04398af17c5927e67dfc6180d2 115 SUPERFAMILY SSF160719 18 108 2.75E-16 T 22-04-2016 NHAM_RS04245 a8399b04398af17c5927e67dfc6180d2 115 Gene3D G3DSA:3.10.450.40 1 106 1.7E-21 T 22-04-2016 NHAM_RS04245 a8399b04398af17c5927e67dfc6180d2 115 PANTHER PTHR35862:SF2 1 102 3.9E-15 T 22-04-2016 NHAM_RS04245 a8399b04398af17c5927e67dfc6180d2 115 Pfam PF04965 Gene 25-like lysozyme 19 94 8.6E-9 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD NHAM_RS05510 abf524e79f7f63ba8cc3e38277fd689f 374 PANTHER PTHR30158:SF8 7 370 4.2E-124 T 22-04-2016 NHAM_RS05510 abf524e79f7f63ba8cc3e38277fd689f 374 PANTHER PTHR30158 7 370 4.2E-124 T 22-04-2016 NHAM_RS05510 abf524e79f7f63ba8cc3e38277fd689f 374 Gene3D G3DSA:2.40.50.100 79 107 1.8E-14 T 22-04-2016 NHAM_RS05510 abf524e79f7f63ba8cc3e38277fd689f 374 Gene3D G3DSA:2.40.50.100 182 211 1.8E-14 T 22-04-2016 NHAM_RS05510 abf524e79f7f63ba8cc3e38277fd689f 374 SUPERFAMILY SSF111369 63 291 8.5E-21 T 22-04-2016 NHAM_RS05510 abf524e79f7f63ba8cc3e38277fd689f 374 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 368 1.2E-67 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NHAM_RS05510 abf524e79f7f63ba8cc3e38277fd689f 374 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 76 287 4.3E-19 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS05375 286e65133073d903ebb8c851b2734988 307 SUPERFAMILY SSF53448 3 231 5.63E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS05375 286e65133073d903ebb8c851b2734988 307 PANTHER PTHR22916 1 223 6.9E-36 T 22-04-2016 NHAM_RS05375 286e65133073d903ebb8c851b2734988 307 Gene3D G3DSA:3.90.550.10 2 237 2.0E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS05375 286e65133073d903ebb8c851b2734988 307 Pfam PF00535 Glycosyl transferase family 2 4 147 1.5E-23 T 22-04-2016 IPR001173 Glycosyltransferase 2-like NHAM_RS06990 c21621f84a5997d3709411e205c680ee 458 Pfam PF00899 ThiF family 182 416 1.3E-24 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 NHAM_RS06990 c21621f84a5997d3709411e205c680ee 458 Gene3D G3DSA:3.40.50.720 377 398 1.5E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06990 c21621f84a5997d3709411e205c680ee 458 Gene3D G3DSA:3.40.50.720 182 332 1.5E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS06990 c21621f84a5997d3709411e205c680ee 458 Pfam PF14464 Prokaryotic homologs of the JAB domain 12 113 4.5E-13 T 22-04-2016 IPR028090 JAB domain, prokaryotic NHAM_RS06990 c21621f84a5997d3709411e205c680ee 458 SUPERFAMILY SSF69572 183 399 3.27E-30 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 NHAM_RS15805 a3c4becaee404541b1e4add9b58cb758 343 Pfam PF01548 Transposase 6 145 5.9E-17 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS15805 a3c4becaee404541b1e4add9b58cb758 343 PANTHER PTHR33055:SF2 2 336 8.1E-148 T 22-04-2016 NHAM_RS15805 a3c4becaee404541b1e4add9b58cb758 343 PANTHER PTHR33055 2 336 8.1E-148 T 22-04-2016 NHAM_RS15805 a3c4becaee404541b1e4add9b58cb758 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 289 1.3E-24 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS19430 e9a749dcfd1d4e7e7d07e2dd43dbd222 145 Pfam PF09722 Protein of unknown function (DUF2384) 93 142 5.3E-15 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 NHAM_RS19430 e9a749dcfd1d4e7e7d07e2dd43dbd222 145 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 18 145 4.2E-21 T 22-04-2016 IPR011979 Conserved hypothetical protein CHP02293 NHAM_RS15060 c41e96d56da9a6cf70e1df0a736f0d01 97 Pfam PF01206 Sulfurtransferase TusA 5 73 1.7E-19 T 22-04-2016 IPR001455 TusA-like domain NHAM_RS15060 c41e96d56da9a6cf70e1df0a736f0d01 97 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 22-04-2016 IPR001455 TusA-like domain NHAM_RS15060 c41e96d56da9a6cf70e1df0a736f0d01 97 PANTHER PTHR33279 6 73 2.8E-17 T 22-04-2016 NHAM_RS15060 c41e96d56da9a6cf70e1df0a736f0d01 97 Gene3D G3DSA:3.30.110.40 5 73 3.8E-22 T 22-04-2016 IPR001455 TusA-like domain NHAM_RS15060 c41e96d56da9a6cf70e1df0a736f0d01 97 SUPERFAMILY SSF64307 5 73 1.44E-20 T 22-04-2016 IPR001455 TusA-like domain NHAM_RS06105 bbf92834f2e921989e7176d12d26b184 350 SUPERFAMILY SSF51269 287 349 6.15E-20 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal NHAM_RS06105 bbf92834f2e921989e7176d12d26b184 350 Pfam PF08666 SAF domain 293 349 1.6E-13 T 22-04-2016 IPR013974 SAF domain NHAM_RS06105 bbf92834f2e921989e7176d12d26b184 350 Gene3D G3DSA:3.90.1210.10 293 349 1.6E-25 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal NHAM_RS06105 bbf92834f2e921989e7176d12d26b184 350 Gene3D G3DSA:3.20.20.70 6 275 2.4E-104 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS06105 bbf92834f2e921989e7176d12d26b184 350 PANTHER PTHR23416:SF62 6 301 8.0E-96 T 22-04-2016 NHAM_RS06105 bbf92834f2e921989e7176d12d26b184 350 SMART SM00858 292 350 2.3E-14 T 22-04-2016 IPR013974 SAF domain NHAM_RS06105 bbf92834f2e921989e7176d12d26b184 350 SUPERFAMILY SSF51569 5 304 4.4E-90 T 22-04-2016 NHAM_RS06105 bbf92834f2e921989e7176d12d26b184 350 Pfam PF03102 NeuB family 39 276 1.5E-86 T 22-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 NHAM_RS06105 bbf92834f2e921989e7176d12d26b184 350 PANTHER PTHR23416 6 301 8.0E-96 T 22-04-2016 NHAM_RS06105 bbf92834f2e921989e7176d12d26b184 350 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 18 344 4.2E-149 T 22-04-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 NHAM_RS05925 3cab83e849688839b9c89e5e787f7599 1162 Gene3D G3DSA:2.60.40.920 405 496 1.8E-5 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain NHAM_RS09065 36d3b72952a0cc6f1173f21039ef9292 79 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 19 77 1.1E-15 T 22-04-2016 IPR025528 BrnA antitoxin of type II toxin-antitoxin system NHAM_RS03470 bcc7454356bd712adc7e2a653cc9e70b 219 SMART SM00382 27 214 7.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS03470 bcc7454356bd712adc7e2a653cc9e70b 219 SUPERFAMILY SSF52540 1 216 1.74E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03470 bcc7454356bd712adc7e2a653cc9e70b 219 Pfam PF00005 ABC transporter 18 165 8.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS03470 bcc7454356bd712adc7e2a653cc9e70b 219 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.7E-82 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 NHAM_RS03470 bcc7454356bd712adc7e2a653cc9e70b 219 PANTHER PTHR24220:SF470 3 216 9.0E-99 T 22-04-2016 NHAM_RS03470 bcc7454356bd712adc7e2a653cc9e70b 219 Gene3D G3DSA:3.40.50.300 1 215 1.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS03470 bcc7454356bd712adc7e2a653cc9e70b 219 PANTHER PTHR24220 3 216 9.0E-99 T 22-04-2016 NHAM_RS03470 bcc7454356bd712adc7e2a653cc9e70b 219 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS11935 821208f1fc71b0f87a3472cee9f9531e 828 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 40 817 18.241 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 NHAM_RS11935 821208f1fc71b0f87a3472cee9f9531e 828 PANTHER PTHR30189 486 813 1.7E-91 T 22-04-2016 NHAM_RS11935 821208f1fc71b0f87a3472cee9f9531e 828 PANTHER PTHR30189 13 454 1.7E-91 T 22-04-2016 NHAM_RS11935 821208f1fc71b0f87a3472cee9f9531e 828 Gene3D G3DSA:2.60.450.10 72 232 1.7E-17 T 22-04-2016 NHAM_RS11935 821208f1fc71b0f87a3472cee9f9531e 828 Pfam PF04453 Organic solvent tolerance protein 332 752 4.0E-78 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 NHAM_RS13795 85657303832786be564840d4be4c39ae 69 PANTHER PTHR36923 5 69 2.5E-20 T 22-04-2016 NHAM_RS13795 85657303832786be564840d4be4c39ae 69 Pfam PF13459 4Fe-4S single cluster domain 7 66 6.1E-14 T 22-04-2016 NHAM_RS13795 85657303832786be564840d4be4c39ae 69 SUPERFAMILY SSF54862 6 66 2.41E-9 T 22-04-2016 NHAM_RS13795 85657303832786be564840d4be4c39ae 69 PANTHER PTHR36923:SF2 5 69 2.5E-20 T 22-04-2016 NHAM_RS13795 85657303832786be564840d4be4c39ae 69 Gene3D G3DSA:3.30.70.20 5 68 2.5E-14 T 22-04-2016 NHAM_RS18710 f2ecb18595012bdb4b0d73d15c63c298 287 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 275 6.3E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NHAM_RS18710 f2ecb18595012bdb4b0d73d15c63c298 287 PANTHER PTHR11795 2 286 2.4E-73 T 22-04-2016 NHAM_RS18710 f2ecb18595012bdb4b0d73d15c63c298 287 PANTHER PTHR11795:SF371 2 286 2.4E-73 T 22-04-2016 NHAM_RS08230 6ddae78e9131ee99766a268321c93814 121 Gene3D G3DSA:1.10.10.60 94 110 7.3E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS08230 6ddae78e9131ee99766a268321c93814 121 SUPERFAMILY SSF46689 5 111 5.98E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS00935 4e49e0e2ad06c9f3e1f3c2328a9ab189 306 PANTHER PTHR21708 1 305 1.1E-131 T 22-04-2016 NHAM_RS00935 4e49e0e2ad06c9f3e1f3c2328a9ab189 306 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 151 7.7E-37 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 NHAM_RS00935 4e49e0e2ad06c9f3e1f3c2328a9ab189 306 SUPERFAMILY SSF51735 1 128 6.36E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS00935 4e49e0e2ad06c9f3e1f3c2328a9ab189 306 SUPERFAMILY SSF48179 178 303 1.02E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NHAM_RS00935 4e49e0e2ad06c9f3e1f3c2328a9ab189 306 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 178 302 7.4E-25 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 NHAM_RS00935 4e49e0e2ad06c9f3e1f3c2328a9ab189 306 PANTHER PTHR21708:SF26 1 305 1.1E-131 T 22-04-2016 NHAM_RS00935 4e49e0e2ad06c9f3e1f3c2328a9ab189 306 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 304 2.4E-61 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 NHAM_RS00935 4e49e0e2ad06c9f3e1f3c2328a9ab189 306 Gene3D G3DSA:1.10.1040.10 178 303 9.0E-26 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NHAM_RS00935 4e49e0e2ad06c9f3e1f3c2328a9ab189 306 Gene3D G3DSA:3.40.50.720 1 176 6.0E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS19575 c5d40abdc8fb423d84a4ec5f16be62b4 110 PANTHER PTHR33803:SF1 1 71 8.8E-22 T 22-04-2016 NHAM_RS19575 c5d40abdc8fb423d84a4ec5f16be62b4 110 PANTHER PTHR33803 1 71 8.8E-22 T 22-04-2016 NHAM_RS06760 9189641f6abc1b247a00eb5e8bc4a47d 681 Gene3D G3DSA:3.40.50.1110 267 536 1.3E-27 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS06760 9189641f6abc1b247a00eb5e8bc4a47d 681 Gene3D G3DSA:3.40.50.1110 603 639 1.3E-27 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS06760 9189641f6abc1b247a00eb5e8bc4a47d 681 Gene3D G3DSA:3.40.50.1110 209 219 1.3E-27 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS06760 9189641f6abc1b247a00eb5e8bc4a47d 681 SUPERFAMILY SSF52266 271 531 1.66E-12 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS06760 9189641f6abc1b247a00eb5e8bc4a47d 681 SUPERFAMILY SSF52266 599 641 1.66E-12 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS08695 fda68eb63294f8e8ef9961e02be50003 361 PANTHER PTHR22572:SF117 119 314 1.3E-48 T 22-04-2016 NHAM_RS08695 fda68eb63294f8e8ef9961e02be50003 361 PANTHER PTHR22572 119 314 1.3E-48 T 22-04-2016 NHAM_RS08695 fda68eb63294f8e8ef9961e02be50003 361 Gene3D G3DSA:2.160.10.10 230 335 8.7E-28 T 22-04-2016 NHAM_RS08695 fda68eb63294f8e8ef9961e02be50003 361 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 35 100 8.0E-21 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 NHAM_RS08695 fda68eb63294f8e8ef9961e02be50003 361 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 18 344 33.672 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 NHAM_RS08695 fda68eb63294f8e8ef9961e02be50003 361 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 17 343 2.6E-103 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 NHAM_RS08695 fda68eb63294f8e8ef9961e02be50003 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 241 270 1.5E-8 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS08695 fda68eb63294f8e8ef9961e02be50003 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 128 162 2.2E-8 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS08695 fda68eb63294f8e8ef9961e02be50003 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 277 310 0.0016 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS08695 fda68eb63294f8e8ef9961e02be50003 361 Gene3D G3DSA:2.160.10.10 126 229 9.2E-24 T 22-04-2016 NHAM_RS08695 fda68eb63294f8e8ef9961e02be50003 361 SUPERFAMILY SSF51161 44 334 3.26E-71 T 22-04-2016 IPR011004 Trimeric LpxA-like NHAM_RS07230 69f74f752fa40f77b667358924999f0f 417 Pfam PF05065 Phage capsid family 129 414 7.6E-90 T 22-04-2016 IPR024455 Phage capsid NHAM_RS07230 69f74f752fa40f77b667358924999f0f 417 SUPERFAMILY SSF56563 121 416 9.81E-80 T 22-04-2016 NHAM_RS07230 69f74f752fa40f77b667358924999f0f 417 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 28 414 1.1E-124 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 NHAM_RS20145 72bc992f8bf00d7b31f70383877c55a4 430 PANTHER PTHR33627:SF1 1 422 5.4E-167 T 22-04-2016 NHAM_RS20145 72bc992f8bf00d7b31f70383877c55a4 430 PANTHER PTHR33627 1 422 5.4E-167 T 22-04-2016 NHAM_RS20145 72bc992f8bf00d7b31f70383877c55a4 430 SUPERFAMILY SSF53098 46 390 5.54E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS20145 72bc992f8bf00d7b31f70383877c55a4 430 Pfam PF13546 DDE superfamily endonuclease 3 266 5.0E-85 T 22-04-2016 NHAM_RS11690 b867cc826cfaa766eb4bbbdf77f48849 176 Gene3D G3DSA:3.40.630.30 11 148 1.4E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS11690 b867cc826cfaa766eb4bbbdf77f48849 176 SUPERFAMILY SSF55729 13 149 4.43E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS11690 b867cc826cfaa766eb4bbbdf77f48849 176 Pfam PF00583 Acetyltransferase (GNAT) family 68 146 5.1E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS06340 e4fbfa56cca56827eeb8a7ca0a52a8c1 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 296 4.0E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS06340 e4fbfa56cca56827eeb8a7ca0a52a8c1 304 PANTHER PTHR30193:SF5 68 304 2.9E-116 T 22-04-2016 NHAM_RS06340 e4fbfa56cca56827eeb8a7ca0a52a8c1 304 PANTHER PTHR30193:SF5 16 52 2.9E-116 T 22-04-2016 NHAM_RS06340 e4fbfa56cca56827eeb8a7ca0a52a8c1 304 SUPERFAMILY SSF161098 13 300 1.44E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS06340 e4fbfa56cca56827eeb8a7ca0a52a8c1 304 PANTHER PTHR30193 68 304 2.9E-116 T 22-04-2016 NHAM_RS06340 e4fbfa56cca56827eeb8a7ca0a52a8c1 304 PANTHER PTHR30193 16 52 2.9E-116 T 22-04-2016 NHAM_RS06340 e4fbfa56cca56827eeb8a7ca0a52a8c1 304 Gene3D G3DSA:1.10.3720.10 14 294 9.2E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS19835 7c0d1878626f72c7c11973f9b21ea7f4 404 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 131 315 3.6E-40 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 NHAM_RS19835 7c0d1878626f72c7c11973f9b21ea7f4 404 Pfam PF10503 Esterase PHB depolymerase 129 314 1.0E-60 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 NHAM_RS19835 7c0d1878626f72c7c11973f9b21ea7f4 404 SUPERFAMILY SSF53474 125 388 6.81E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS19835 7c0d1878626f72c7c11973f9b21ea7f4 404 Gene3D G3DSA:3.40.50.1820 108 397 1.4E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold NHAM_RS10935 a40a2c825e3182ad6d01a9d8e23f15ce 357 Pfam PF04860 Phage portal protein 73 334 5.3E-14 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein NHAM_RS07015 6fabc6ed1600d38ab7913f88dce104ad 624 PANTHER PTHR14226 40 621 1.1E-82 T 22-04-2016 NHAM_RS07015 6fabc6ed1600d38ab7913f88dce104ad 624 SUPERFAMILY SSF52151 332 609 5.49E-45 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NHAM_RS07015 6fabc6ed1600d38ab7913f88dce104ad 624 SUPERFAMILY SSF51206 30 146 1.3E-26 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like NHAM_RS07015 6fabc6ed1600d38ab7913f88dce104ad 624 Gene3D G3DSA:2.60.120.10 23 149 4.1E-28 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS07015 6fabc6ed1600d38ab7913f88dce104ad 624 SMART SM00100 23 141 2.7E-19 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS07015 6fabc6ed1600d38ab7913f88dce104ad 624 Gene3D G3DSA:3.40.1090.10 336 505 1.5E-8 T 22-04-2016 NHAM_RS07015 6fabc6ed1600d38ab7913f88dce104ad 624 Pfam PF01734 Patatin-like phospholipase 336 390 5.9E-13 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NHAM_RS07015 6fabc6ed1600d38ab7913f88dce104ad 624 Pfam PF01734 Patatin-like phospholipase 456 505 5.4E-6 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NHAM_RS07015 6fabc6ed1600d38ab7913f88dce104ad 624 Pfam PF00027 Cyclic nucleotide-binding domain 42 129 1.9E-20 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain NHAM_RS01855 10b5f65f3c4205b6e1c4080c274a22cf 237 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS01855 10b5f65f3c4205b6e1c4080c274a22cf 237 Pfam PF00005 ABC transporter 20 164 3.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS01855 10b5f65f3c4205b6e1c4080c274a22cf 237 SUPERFAMILY SSF52540 4 235 4.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01855 10b5f65f3c4205b6e1c4080c274a22cf 237 Gene3D G3DSA:3.40.50.300 2 232 1.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS01855 10b5f65f3c4205b6e1c4080c274a22cf 237 PANTHER PTHR24220 6 236 1.8E-120 T 22-04-2016 NHAM_RS01855 10b5f65f3c4205b6e1c4080c274a22cf 237 PANTHER PTHR24220:SF568 6 236 1.8E-120 T 22-04-2016 NHAM_RS01855 10b5f65f3c4205b6e1c4080c274a22cf 237 SMART SM00382 29 216 3.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS03715 1e2cdff37f304d7021c019da00849f61 240 PANTHER PTHR30055 37 240 8.9E-38 T 22-04-2016 NHAM_RS03715 1e2cdff37f304d7021c019da00849f61 240 SUPERFAMILY SSF46689 45 125 1.5E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS03715 1e2cdff37f304d7021c019da00849f61 240 PANTHER PTHR30055:SF27 37 240 8.9E-38 T 22-04-2016 NHAM_RS03715 1e2cdff37f304d7021c019da00849f61 240 Pfam PF16859 Bacterial transcriptional repressor C-terminal 119 222 7.3E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NHAM_RS03715 1e2cdff37f304d7021c019da00849f61 240 Gene3D G3DSA:1.10.357.10 45 225 1.0E-39 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NHAM_RS03715 1e2cdff37f304d7021c019da00849f61 240 Pfam PF00440 Bacterial regulatory proteins, tetR family 54 99 9.7E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS03715 1e2cdff37f304d7021c019da00849f61 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 67 5.5E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS03715 1e2cdff37f304d7021c019da00849f61 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 75 98 5.5E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS03715 1e2cdff37f304d7021c019da00849f61 240 SUPERFAMILY SSF48498 120 234 1.2E-18 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NHAM_RS19670 155dd94d7831150d9d9bea1d335c1084 365 Pfam PF01446 Replication protein 109 233 5.1E-24 T 22-04-2016 IPR000989 Replication protein GO:0003677|GO:0005727|GO:0006260 NHAM_RS17865 20a9c68aac6d175a58e914456ba0cfaa 249 Gene3D G3DSA:3.40.50.620 1 246 1.1E-102 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS17865 20a9c68aac6d175a58e914456ba0cfaa 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 NHAM_RS17865 20a9c68aac6d175a58e914456ba0cfaa 249 PANTHER PTHR21294:SF8 1 249 8.6E-149 T 22-04-2016 NHAM_RS17865 20a9c68aac6d175a58e914456ba0cfaa 249 PIRSF PIRSF000090 1 249 1.2E-82 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 NHAM_RS17865 20a9c68aac6d175a58e914456ba0cfaa 249 SUPERFAMILY SSF52402 1 242 3.77E-84 T 22-04-2016 NHAM_RS17865 20a9c68aac6d175a58e914456ba0cfaa 249 PANTHER PTHR21294 1 249 8.6E-149 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 NHAM_RS17865 20a9c68aac6d175a58e914456ba0cfaa 249 SMART SM00893 23 211 1.9E-64 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 NHAM_RS17865 20a9c68aac6d175a58e914456ba0cfaa 249 Pfam PF01012 Electron transfer flavoprotein domain 29 205 1.2E-46 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 NHAM_RS02485 946d75684c1d9f465b0f098b26d2fad7 270 SUPERFAMILY SSF53271 92 262 4.46E-31 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS02485 946d75684c1d9f465b0f098b26d2fad7 270 Pfam PF00156 Phosphoribosyl transferase domain 178 265 3.9E-8 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NHAM_RS02485 946d75684c1d9f465b0f098b26d2fad7 270 PANTHER PTHR11907 39 264 3.6E-55 T 22-04-2016 NHAM_RS02485 946d75684c1d9f465b0f098b26d2fad7 270 Gene3D G3DSA:3.40.50.2020 101 264 4.7E-33 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS02485 946d75684c1d9f465b0f098b26d2fad7 270 PANTHER PTHR11907:SF9 39 264 3.6E-55 T 22-04-2016 NHAM_RS00985 77e31e1829e41e22aa848ddd35589091 584 Pfam PF07940 Heparinase II/III-like protein 311 559 2.1E-74 T 22-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 NHAM_RS13065 208a3cd56a2c985d9535feac0637cb62 159 SUPERFAMILY SSF54637 13 153 3.57E-32 T 22-04-2016 IPR029069 HotDog domain NHAM_RS13065 208a3cd56a2c985d9535feac0637cb62 159 Pfam PF01575 MaoC like domain 19 123 1.4E-20 T 22-04-2016 IPR002539 MaoC-like domain NHAM_RS13065 208a3cd56a2c985d9535feac0637cb62 159 PANTHER PTHR13078 4 150 1.0E-30 T 22-04-2016 NHAM_RS13065 208a3cd56a2c985d9535feac0637cb62 159 Gene3D G3DSA:3.10.129.10 10 156 2.3E-30 T 22-04-2016 IPR029069 HotDog domain NHAM_RS12345 06f41485d89ea3478acf13df4a57ab7d 483 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 23 69 6.1E-14 T 22-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal NHAM_RS12345 06f41485d89ea3478acf13df4a57ab7d 483 SUPERFAMILY SSF53300 154 209 1.57E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A NHAM_RS12345 06f41485d89ea3478acf13df4a57ab7d 483 SUPERFAMILY SSF53300 322 395 1.57E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A NHAM_RS12345 06f41485d89ea3478acf13df4a57ab7d 483 Gene3D G3DSA:3.40.50.410 156 211 2.6E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A NHAM_RS12345 06f41485d89ea3478acf13df4a57ab7d 483 Gene3D G3DSA:3.40.50.410 324 472 2.6E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 Pfam PF01926 50S ribosome-binding GTPase 162 280 3.0E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 Gene3D G3DSA:3.40.50.300 160 334 1.0E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 PANTHER PTHR11702:SF3 1 334 1.8E-149 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 Hamap MF_01454 GTPase Obg [obg]. 2 327 45.825 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 325 2.5E-136 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 Gene3D G3DSA:2.70.210.12 2 155 6.4E-58 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 Pfam PF01018 GTP1/OBG 3 158 1.6E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 PANTHER PTHR11702 1 334 1.8E-149 T 22-04-2016 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 PIRSF PIRSF002401 1 350 5.1E-130 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 SUPERFAMILY SSF82051 2 158 2.22E-55 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 2.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 NHAM_RS02685 5251635c70e34f9a8d48480d743a9aac 358 SUPERFAMILY SSF52540 150 334 4.04E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS12750 707409499d0311c8b56e53e97710c92b 171 PANTHER PTHR30629 1 163 3.9E-33 T 22-04-2016 NHAM_RS12750 707409499d0311c8b56e53e97710c92b 171 SUPERFAMILY SSF56349 1 153 1.47E-33 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS12750 707409499d0311c8b56e53e97710c92b 171 PANTHER PTHR30629:SF2 1 163 3.9E-33 T 22-04-2016 NHAM_RS12750 707409499d0311c8b56e53e97710c92b 171 Pfam PF00589 Phage integrase family 2 131 1.4E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS12750 707409499d0311c8b56e53e97710c92b 171 Gene3D G3DSA:1.10.443.10 1 152 1.6E-27 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS03135 b9b2d7970a66d51f7c4880fb6ba2722e 76 Pfam PF00839 Cysteine rich repeat 31 62 9.0E-5 T 22-04-2016 IPR001893 Cysteine-rich Golgi apparatus protein 1 repeat GO:0016020 NHAM_RS05150 36ee2083c4c2d930970e5a0f4870d31c 114 PANTHER PTHR34583:SF1 1 111 2.5E-39 T 22-04-2016 NHAM_RS05150 36ee2083c4c2d930970e5a0f4870d31c 114 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 108 1.3E-25 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NHAM_RS05150 36ee2083c4c2d930970e5a0f4870d31c 114 PANTHER PTHR34583 1 111 2.5E-39 T 22-04-2016 NHAM_RS01175 11b209dedbb48ba316b5552bf79d60cb 163 Pfam PF06319 Protein of unknown function (DUF1052) 13 155 1.7E-70 T 22-04-2016 IPR009394 DNA repair protein MmcB-like NHAM_RS01175 11b209dedbb48ba316b5552bf79d60cb 163 PIRSF PIRSF031796 2 162 2.8E-72 T 22-04-2016 IPR009394 DNA repair protein MmcB-like NHAM_RS04935 13e2ec996804424653d51de1355e6a18 307 Gene3D G3DSA:2.40.50.100 60 92 5.0E-15 T 22-04-2016 NHAM_RS04935 13e2ec996804424653d51de1355e6a18 307 Gene3D G3DSA:2.40.50.100 169 194 5.0E-15 T 22-04-2016 NHAM_RS04935 13e2ec996804424653d51de1355e6a18 307 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 252 1.2E-12 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS04935 13e2ec996804424653d51de1355e6a18 307 PANTHER PTHR30469 35 252 7.7E-23 T 22-04-2016 NHAM_RS04935 13e2ec996804424653d51de1355e6a18 307 SUPERFAMILY SSF111369 58 230 1.23E-19 T 22-04-2016 NHAM_RS10630 6d534ffb7d9afe7528df4006e8db33a4 356 SUPERFAMILY SSF52540 38 246 2.6E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10630 6d534ffb7d9afe7528df4006e8db33a4 356 Gene3D G3DSA:3.40.50.300 48 244 2.3E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10630 6d534ffb7d9afe7528df4006e8db33a4 356 Pfam PF05621 Bacterial TniB protein 73 293 1.3E-19 T 22-04-2016 IPR008868 Bacterial TniB NHAM_RS12075 c9c3370ca92ccd252c69f4ec09412552 256 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 92 152 3.8E-16 T 22-04-2016 NHAM_RS12075 c9c3370ca92ccd252c69f4ec09412552 256 SUPERFAMILY SSF55166 32 155 1.49E-19 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NHAM_RS11175 6ceac73d31bfc440c9d30c913e353922 426 PANTHER PTHR30489 24 426 4.7E-78 T 22-04-2016 NHAM_RS11175 6ceac73d31bfc440c9d30c913e353922 426 Pfam PF12704 MacB-like periplasmic core domain 42 255 2.6E-18 T 22-04-2016 IPR025857 MacB-like periplasmic core domain NHAM_RS11175 6ceac73d31bfc440c9d30c913e353922 426 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 17 426 2.3E-153 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 NHAM_RS11175 6ceac73d31bfc440c9d30c913e353922 426 Pfam PF02687 FtsX-like permease family 286 419 3.7E-15 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 NHAM_RS11175 6ceac73d31bfc440c9d30c913e353922 426 PANTHER PTHR30489:SF8 24 426 4.7E-78 T 22-04-2016 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 SUPERFAMILY SSF51998 371 810 1.5E-182 T 22-04-2016 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 SUPERFAMILY SSF51998 841 911 1.5E-182 T 22-04-2016 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 SUPERFAMILY SSF48168 154 370 4.58E-61 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 750 772 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 295 368 1.3E-21 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 PANTHER PTHR11573 154 920 0.0 T 22-04-2016 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 298 910 7.0E-209 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 Gene3D G3DSA:3.20.70.20 761 806 6.0E-82 T 22-04-2016 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 Gene3D G3DSA:3.20.70.20 548 705 6.0E-82 T 22-04-2016 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 Gene3D G3DSA:3.20.70.20 867 911 6.0E-82 T 22-04-2016 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 Gene3D G3DSA:3.20.70.20 286 493 6.0E-82 T 22-04-2016 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 PRINTS PR01183 Ribonucleotide reductase large chain signature 685 708 1.4E-40 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 PRINTS PR01183 Ribonucleotide reductase large chain signature 761 788 1.4E-40 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 PRINTS PR01183 Ribonucleotide reductase large chain signature 582 593 1.4E-40 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 PRINTS PR01183 Ribonucleotide reductase large chain signature 657 679 1.4E-40 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 PRINTS PR01183 Ribonucleotide reductase large chain signature 619 642 1.4E-40 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 PRINTS PR01183 Ribonucleotide reductase large chain signature 447 466 1.4E-40 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS18790 6e16056e429097357db646faee900ccb 966 Pfam PF03477 ATP cone domain 29 125 1.8E-18 T 22-04-2016 IPR005144 ATP-cone domain NHAM_RS18790 6e16056e429097357db646faee900ccb 966 Pfam PF02867 Ribonucleotide reductase, barrel domain 372 906 4.8E-178 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NHAM_RS08965 0ec97ff2a92aee5c522af8b2d5683a26 273 SMART SM00671 124 162 23.0 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS08965 0ec97ff2a92aee5c522af8b2d5683a26 273 SMART SM00671 164 199 5.7E-4 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS08965 0ec97ff2a92aee5c522af8b2d5683a26 273 SMART SM00671 76 111 3.7E-7 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS08965 0ec97ff2a92aee5c522af8b2d5683a26 273 SMART SM00671 200 235 72.0 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS08965 0ec97ff2a92aee5c522af8b2d5683a26 273 Pfam PF08238 Sel1 repeat 164 198 8.0E-5 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS08965 0ec97ff2a92aee5c522af8b2d5683a26 273 Pfam PF08238 Sel1 repeat 129 159 0.12 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS08965 0ec97ff2a92aee5c522af8b2d5683a26 273 Pfam PF08238 Sel1 repeat 77 108 2.3E-6 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS08965 0ec97ff2a92aee5c522af8b2d5683a26 273 Pfam PF08238 Sel1 repeat 201 231 0.31 T 22-04-2016 IPR006597 Sel1-like repeat NHAM_RS08965 0ec97ff2a92aee5c522af8b2d5683a26 273 SUPERFAMILY SSF81901 63 266 1.4E-25 T 22-04-2016 NHAM_RS08965 0ec97ff2a92aee5c522af8b2d5683a26 273 PANTHER PTHR11102 67 230 1.3E-27 T 22-04-2016 NHAM_RS08965 0ec97ff2a92aee5c522af8b2d5683a26 273 Gene3D G3DSA:1.25.40.10 63 233 9.9E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS00420 adc97953ed6c74f4f475076d13e2408e 449 PANTHER PTHR11730 23 446 6.3E-192 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 NHAM_RS00420 adc97953ed6c74f4f475076d13e2408e 449 ProSitePatterns PS01219 Ammonium transporters signature. 205 230 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 NHAM_RS00420 adc97953ed6c74f4f475076d13e2408e 449 Pfam PF00909 Ammonium Transporter Family 53 447 2.8E-121 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 NHAM_RS00420 adc97953ed6c74f4f475076d13e2408e 449 SUPERFAMILY SSF111352 47 430 1.29E-134 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 NHAM_RS00420 adc97953ed6c74f4f475076d13e2408e 449 TIGRFAM TIGR00836 amt: ammonium transporter 51 447 3.1E-138 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 NHAM_RS00420 adc97953ed6c74f4f475076d13e2408e 449 Gene3D G3DSA:1.10.3430.10 46 430 6.6E-147 T 22-04-2016 IPR029020 Ammonium/urea transporter NHAM_RS00420 adc97953ed6c74f4f475076d13e2408e 449 PANTHER PTHR11730:SF17 23 446 6.3E-192 T 22-04-2016 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 Pfam PF00174 Oxidoreductase molybdopterin binding domain 138 310 2.5E-45 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 SUPERFAMILY SSF56524 94 322 1.23E-58 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 339 455 3.1E-16 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 PANTHER PTHR19372 104 458 3.7E-74 T 22-04-2016 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 SUPERFAMILY SSF81296 342 457 6.16E-29 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 Gene3D G3DSA:3.90.420.10 98 322 3.8E-60 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 Gene3D G3DSA:2.60.40.650 342 456 1.7E-29 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 PRINTS PR00407 Eukaryotic molybdopterin domain signature 104 118 1.5E-17 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 PRINTS PR00407 Eukaryotic molybdopterin domain signature 203 218 1.5E-17 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 PRINTS PR00407 Eukaryotic molybdopterin domain signature 291 304 1.5E-17 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 PRINTS PR00407 Eukaryotic molybdopterin domain signature 339 351 1.5E-17 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 PRINTS PR00407 Eukaryotic molybdopterin domain signature 275 288 1.5E-17 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 PRINTS PR00407 Eukaryotic molybdopterin domain signature 124 140 1.5E-17 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS04720 f36c8992f21f279fe878581d437197cb 458 PRINTS PR00407 Eukaryotic molybdopterin domain signature 379 391 1.5E-17 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 NHAM_RS16060 babe76bc4c8689288e03975e42b611f3 175 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 159 9.7E-49 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 NHAM_RS16060 babe76bc4c8689288e03975e42b611f3 175 Gene3D G3DSA:3.40.50.300 1 160 1.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16060 babe76bc4c8689288e03975e42b611f3 175 PANTHER PTHR19136:SF82 3 136 4.6E-27 T 22-04-2016 NHAM_RS16060 babe76bc4c8689288e03975e42b611f3 175 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 3 135 1.1E-53 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 NHAM_RS16060 babe76bc4c8689288e03975e42b611f3 175 SUPERFAMILY SSF52540 1 155 4.08E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16060 babe76bc4c8689288e03975e42b611f3 175 PANTHER PTHR19136 3 136 4.6E-27 T 22-04-2016 NHAM_RS16145 1199a94418f97bc6ff98fa04f1a9363f 71 PIRSF PIRSF002599 1 71 7.5E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 NHAM_RS16145 1199a94418f97bc6ff98fa04f1a9363f 71 SUPERFAMILY SSF50249 2 69 3.0E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS16145 1199a94418f97bc6ff98fa04f1a9363f 71 SMART SM00357 4 70 8.4E-24 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 NHAM_RS16145 1199a94418f97bc6ff98fa04f1a9363f 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 35 - T 22-04-2016 IPR019844 Cold-shock conserved site NHAM_RS16145 1199a94418f97bc6ff98fa04f1a9363f 71 Gene3D G3DSA:2.40.50.140 3 68 2.2E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS16145 1199a94418f97bc6ff98fa04f1a9363f 71 Pfam PF00313 'Cold-shock' DNA-binding domain 3 68 6.3E-24 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS16145 1199a94418f97bc6ff98fa04f1a9363f 71 PANTHER PTHR11544 1 68 7.1E-25 T 22-04-2016 NHAM_RS16145 1199a94418f97bc6ff98fa04f1a9363f 71 PRINTS PR00050 Cold shock protein signature 5 20 4.9E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS16145 1199a94418f97bc6ff98fa04f1a9363f 71 PRINTS PR00050 Cold shock protein signature 26 35 4.9E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS16145 1199a94418f97bc6ff98fa04f1a9363f 71 PRINTS PR00050 Cold shock protein signature 41 59 4.9E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NHAM_RS16540 72266be49d45d7366f4176bc625b097e 159 PIRSF PIRSF032064 1 159 1.5E-56 T 22-04-2016 IPR010593 Protein of unknown function DUF1159 NHAM_RS16540 72266be49d45d7366f4176bc625b097e 159 Pfam PF05258 Protein of unknown function (DUF721) 11 107 2.5E-21 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 NHAM_RS03910 45705670bd7a1da2a0417ff257bf90b2 284 Pfam PF07386 Protein of unknown function (DUF1499) 114 254 2.0E-27 T 22-04-2016 IPR010865 Protein of unknown function DUF1499 NHAM_RS09825 03ecc43f201b73039b75b2a40a71995d 277 Gene3D G3DSA:3.40.50.620 154 275 3.0E-13 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS09825 03ecc43f201b73039b75b2a40a71995d 277 Pfam PF00582 Universal stress protein family 154 274 3.6E-5 T 22-04-2016 IPR006016 UspA GO:0006950 NHAM_RS09825 03ecc43f201b73039b75b2a40a71995d 277 SUPERFAMILY SSF52402 153 276 8.37E-17 T 22-04-2016 NHAM_RS18370 def5a1cdcd8a235dea3c514453d6677e 238 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 25 220 1.1E-49 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NHAM_RS18370 def5a1cdcd8a235dea3c514453d6677e 238 Gene3D G3DSA:3.40.1280.10 2 159 5.5E-58 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NHAM_RS18370 def5a1cdcd8a235dea3c514453d6677e 238 PIRSF PIRSF000386 2 236 2.7E-83 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NHAM_RS18370 def5a1cdcd8a235dea3c514453d6677e 238 Gene3D G3DSA:1.10.1270.20 160 227 2.6E-28 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NHAM_RS18370 def5a1cdcd8a235dea3c514453d6677e 238 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 4 227 8.0E-73 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NHAM_RS18370 def5a1cdcd8a235dea3c514453d6677e 238 PANTHER PTHR32125:SF1 3 227 1.5E-94 T 22-04-2016 NHAM_RS18370 def5a1cdcd8a235dea3c514453d6677e 238 SUPERFAMILY SSF75217 2 230 3.4E-86 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases NHAM_RS18370 def5a1cdcd8a235dea3c514453d6677e 238 PANTHER PTHR32125 3 227 1.5E-94 T 22-04-2016 NHAM_RS18370 def5a1cdcd8a235dea3c514453d6677e 238 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 238 99.087 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NHAM_RS19895 b53e87d22e2c1c6b0c8454eb50525256 86 PANTHER PTHR33884 1 85 8.8E-32 T 22-04-2016 NHAM_RS19895 b53e87d22e2c1c6b0c8454eb50525256 86 PANTHER PTHR33884:SF1 1 85 8.8E-32 T 22-04-2016 NHAM_RS19895 b53e87d22e2c1c6b0c8454eb50525256 86 Pfam PF04226 Transglycosylase associated protein 34 80 6.0E-14 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 SMART SM00938 4 105 1.2E-63 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 PIRSF PIRSF039144 1 112 2.2E-52 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 SUPERFAMILY SSF54913 1 112 2.89E-44 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 PRINTS PR00340 P-II protein signature 83 103 3.8E-40 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 PRINTS PR00340 P-II protein signature 52 75 3.8E-40 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 PRINTS PR00340 P-II protein signature 2 17 3.8E-40 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 PRINTS PR00340 P-II protein signature 23 41 3.8E-40 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 Gene3D G3DSA:3.30.70.120 1 112 2.6E-48 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.1E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 PANTHER PTHR30115:SF15 1 112 2.3E-69 T 22-04-2016 NHAM_RS00430 1e417f42cf9067173dfcfe308d1c9c5c 112 PANTHER PTHR30115 1 112 2.3E-69 T 22-04-2016 NHAM_RS20470 e4430455160b47e338b27740a71f29d8 165 PANTHER PTHR30007 53 163 1.8E-20 T 22-04-2016 NHAM_RS20470 e4430455160b47e338b27740a71f29d8 165 PANTHER PTHR30007:SF0 53 163 1.8E-20 T 22-04-2016 NHAM_RS20470 e4430455160b47e338b27740a71f29d8 165 Pfam PF13586 Transposase DDE domain 77 156 3.0E-10 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS03175 b3572d0ae4df9afb8156bd003680e821 169 SUPERFAMILY SSF55729 1 148 3.6E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS03175 b3572d0ae4df9afb8156bd003680e821 169 Pfam PF00583 Acetyltransferase (GNAT) family 67 144 1.4E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS03175 b3572d0ae4df9afb8156bd003680e821 169 Gene3D G3DSA:3.40.630.30 6 167 2.5E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS03175 b3572d0ae4df9afb8156bd003680e821 169 PANTHER PTHR23091 6 144 1.0E-13 T 22-04-2016 NHAM_RS05500 177e99a37ad9cd09a891c0216423c8d9 71 Pfam PF05532 CsbD-like 6 58 2.7E-17 T 22-04-2016 IPR008462 CsbD-like NHAM_RS05500 177e99a37ad9cd09a891c0216423c8d9 71 Gene3D G3DSA:1.10.1470.10 4 66 1.1E-17 T 22-04-2016 IPR008462 CsbD-like NHAM_RS05500 177e99a37ad9cd09a891c0216423c8d9 71 SUPERFAMILY SSF69047 5 64 5.1E-14 T 22-04-2016 IPR008462 CsbD-like NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 SUPERFAMILY SSF82693 43 126 4.97E-20 T 22-04-2016 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 Gene3D G3DSA:3.30.70.1430 42 142 2.0E-25 T 22-04-2016 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 Pfam PF00873 AcrB/AcrD/AcrF family 5 1059 2.4E-290 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1065 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 PRINTS PR00702 Acriflavin resistance protein family signature 503 526 6.7E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 PRINTS PR00702 Acriflavin resistance protein family signature 362 385 6.7E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.7E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 6.7E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 PRINTS PR00702 Acriflavin resistance protein family signature 576 593 6.7E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 6.7E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 PANTHER PTHR32063 2 145 0.0 T 22-04-2016 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 PANTHER PTHR32063 163 1070 0.0 T 22-04-2016 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 Gene3D G3DSA:1.10.3850.10 307 530 1.0E-43 T 22-04-2016 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 Gene3D G3DSA:1.10.3850.10 845 1061 5.6E-57 T 22-04-2016 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 SUPERFAMILY SSF82866 323 528 2.22E-31 T 22-04-2016 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 SUPERFAMILY SSF82693 176 214 3.14E-15 T 22-04-2016 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 SUPERFAMILY SSF82693 300 356 3.14E-15 T 22-04-2016 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 SUPERFAMILY SSF82714 215 298 7.19E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 SUPERFAMILY SSF82866 837 1063 4.84E-54 T 22-04-2016 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 SUPERFAMILY SSF82714 748 839 3.4E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 PANTHER PTHR32063:SF24 2 145 0.0 T 22-04-2016 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 PANTHER PTHR32063:SF24 163 1070 0.0 T 22-04-2016 NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 Gene3D G3DSA:3.30.2090.10 215 297 3.3E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS09650 43bf4acf124daa08bc7182a0a95598ac 1079 Gene3D G3DSA:3.30.2090.10 750 839 6.1E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NHAM_RS16430 af6b3649940dfa3384e4ec455c80ed80 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS16430 af6b3649940dfa3384e4ec455c80ed80 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS16430 af6b3649940dfa3384e4ec455c80ed80 227 PANTHER PTHR30055:SF14 3 220 1.1E-76 T 22-04-2016 NHAM_RS16430 af6b3649940dfa3384e4ec455c80ed80 227 PANTHER PTHR30055 3 220 1.1E-76 T 22-04-2016 NHAM_RS16430 af6b3649940dfa3384e4ec455c80ed80 227 SUPERFAMILY SSF46689 13 89 2.54E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS16430 af6b3649940dfa3384e4ec455c80ed80 227 Gene3D G3DSA:1.10.357.10 15 194 1.9E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NHAM_RS16430 af6b3649940dfa3384e4ec455c80ed80 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 2.6E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NHAM_RS16430 af6b3649940dfa3384e4ec455c80ed80 227 SUPERFAMILY SSF48498 90 189 1.11E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NHAM_RS02170 e8deae1d8e83708579b88aa4cd004db7 355 Pfam PF00534 Glycosyl transferases group 1 170 310 1.4E-22 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 NHAM_RS02170 e8deae1d8e83708579b88aa4cd004db7 355 Pfam PF13439 Glycosyltransferase Family 4 18 136 7.2E-12 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NHAM_RS02170 e8deae1d8e83708579b88aa4cd004db7 355 SUPERFAMILY SSF53756 11 342 5.5E-59 T 22-04-2016 NHAM_RS02170 e8deae1d8e83708579b88aa4cd004db7 355 Gene3D G3DSA:3.40.50.2000 165 310 4.2E-20 T 22-04-2016 NHAM_RS02170 e8deae1d8e83708579b88aa4cd004db7 355 PANTHER PTHR12526 1 342 1.2E-43 T 22-04-2016 NHAM_RS10725 daf47ddb26e59c49e6bc01e8e282f2ef 150 PANTHER PTHR31474 1 142 3.1E-19 T 22-04-2016 NHAM_RS10725 daf47ddb26e59c49e6bc01e8e282f2ef 150 Pfam PF07681 DoxX 5 103 7.9E-16 T 22-04-2016 IPR032808 DoxX family NHAM_RS09615 b52cdf453c21e11c67776b50fd51d9b8 188 Pfam PF01292 Prokaryotic cytochrome b561 21 182 5.9E-23 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NHAM_RS09615 b52cdf453c21e11c67776b50fd51d9b8 188 Gene3D G3DSA:1.20.950.20 49 185 1.2E-6 T 22-04-2016 NHAM_RS09615 b52cdf453c21e11c67776b50fd51d9b8 188 Gene3D G3DSA:1.20.950.20 18 44 4.2E-4 T 22-04-2016 NHAM_RS09615 b52cdf453c21e11c67776b50fd51d9b8 188 SUPERFAMILY SSF81342 16 186 5.96E-38 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 NHAM_RS06520 f72b67b041816325c36566f595e689a8 382 PANTHER PTHR30474:SF2 1 382 4.0E-124 T 22-04-2016 NHAM_RS06520 f72b67b041816325c36566f595e689a8 382 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 18 364 7.2E-105 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 NHAM_RS06520 f72b67b041816325c36566f595e689a8 382 PANTHER PTHR30474 1 382 4.0E-124 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NHAM_RS06520 f72b67b041816325c36566f595e689a8 382 Pfam PF01098 Cell cycle protein 19 365 9.5E-77 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NHAM_RS03585 95c8374fb5802bb520fe19776f0ea16c 540 PRINTS PR01009 Flagellar M-ring protein signature 187 205 3.2E-34 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NHAM_RS03585 95c8374fb5802bb520fe19776f0ea16c 540 PRINTS PR01009 Flagellar M-ring protein signature 327 351 3.2E-34 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NHAM_RS03585 95c8374fb5802bb520fe19776f0ea16c 540 PRINTS PR01009 Flagellar M-ring protein signature 255 273 3.2E-34 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NHAM_RS03585 95c8374fb5802bb520fe19776f0ea16c 540 PRINTS PR01009 Flagellar M-ring protein signature 146 160 3.2E-34 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NHAM_RS03585 95c8374fb5802bb520fe19776f0ea16c 540 PRINTS PR01009 Flagellar M-ring protein signature 114 132 3.2E-34 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NHAM_RS03585 95c8374fb5802bb520fe19776f0ea16c 540 Pfam PF01514 Secretory protein of YscJ/FliF family 24 211 4.3E-67 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF NHAM_RS03585 95c8374fb5802bb520fe19776f0ea16c 540 Pfam PF08345 Flagellar M-ring protein C-terminal 244 403 4.8E-39 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal NHAM_RS03585 95c8374fb5802bb520fe19776f0ea16c 540 PANTHER PTHR30046 1 540 1.1E-133 T 22-04-2016 NHAM_RS03585 95c8374fb5802bb520fe19776f0ea16c 540 PANTHER PTHR30046:SF0 1 540 1.1E-133 T 22-04-2016 NHAM_RS03585 95c8374fb5802bb520fe19776f0ea16c 540 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 16 538 7.1E-95 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NHAM_RS03585 95c8374fb5802bb520fe19776f0ea16c 540 PIRSF PIRSF004862 1 540 7.2E-135 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NHAM_RS03025 e2ce8658b2f3963e135e029d70958528 256 Pfam PF14335 Domain of unknown function (DUF4391) 14 249 2.8E-76 T 22-04-2016 IPR025503 Protein of unknown function DUF4391 NHAM_RS01395 b639a7c6b2d7fea6c8d80eceea42f100 340 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 252 326 6.2E-15 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 NHAM_RS01395 b639a7c6b2d7fea6c8d80eceea42f100 340 Hamap MF_01694 Biotin synthase [bioB]. 20 329 41.582 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 NHAM_RS01395 b639a7c6b2d7fea6c8d80eceea42f100 340 TIGRFAM TIGR00433 bioB: biotin synthase 30 326 9.3E-118 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 NHAM_RS01395 b639a7c6b2d7fea6c8d80eceea42f100 340 SUPERFAMILY SSF102114 20 327 4.45E-87 T 22-04-2016 NHAM_RS01395 b639a7c6b2d7fea6c8d80eceea42f100 340 PANTHER PTHR22976 22 327 2.0E-151 T 22-04-2016 NHAM_RS01395 b639a7c6b2d7fea6c8d80eceea42f100 340 PANTHER PTHR22976:SF1 22 327 2.0E-151 T 22-04-2016 NHAM_RS01395 b639a7c6b2d7fea6c8d80eceea42f100 340 SMART SM00876 235 328 1.7E-36 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 NHAM_RS01395 b639a7c6b2d7fea6c8d80eceea42f100 340 SMART SM00729 58 271 3.5E-34 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NHAM_RS01395 b639a7c6b2d7fea6c8d80eceea42f100 340 Pfam PF04055 Radical SAM superfamily 65 211 2.9E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 NHAM_RS01395 b639a7c6b2d7fea6c8d80eceea42f100 340 PIRSF PIRSF001619 9 334 1.2E-129 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 NHAM_RS01395 b639a7c6b2d7fea6c8d80eceea42f100 340 Gene3D G3DSA:3.20.20.70 20 327 1.3E-95 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS18015 4f3c087a724d9802914b7a41b4316e41 247 Gene3D G3DSA:3.40.630.30 28 194 3.9E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS18015 4f3c087a724d9802914b7a41b4316e41 247 SUPERFAMILY SSF55729 24 220 1.36E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS07755 f64b73b0435ca1f0c3c6f2de13db7897 337 PANTHER PTHR30572:SF11 101 337 1.9E-67 T 22-04-2016 NHAM_RS07755 f64b73b0435ca1f0c3c6f2de13db7897 337 Pfam PF01618 MotA/TolQ/ExbB proton channel family 179 302 1.4E-33 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NHAM_RS07755 f64b73b0435ca1f0c3c6f2de13db7897 337 PANTHER PTHR30572 101 337 1.9E-67 T 22-04-2016 NHAM_RS07755 f64b73b0435ca1f0c3c6f2de13db7897 337 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 109 318 2.2E-92 T 22-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 NHAM_RS07920 18aa9be9f3544b970d484962d9a45d84 98 ProSitePatterns PS00050 Ribosomal protein L23 signature. 80 95 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site NHAM_RS07920 18aa9be9f3544b970d484962d9a45d84 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 97 21.582 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07920 18aa9be9f3544b970d484962d9a45d84 98 PANTHER PTHR11620 7 94 9.3E-34 T 22-04-2016 NHAM_RS07920 18aa9be9f3544b970d484962d9a45d84 98 SUPERFAMILY SSF54189 6 95 2.19E-31 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS07920 18aa9be9f3544b970d484962d9a45d84 98 Pfam PF00276 Ribosomal protein L23 9 94 7.4E-30 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07920 18aa9be9f3544b970d484962d9a45d84 98 Gene3D G3DSA:3.30.70.330 6 97 4.2E-35 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NHAM_RS17535 a10c14b84269ed285e365ee66e0ce0d4 696 Gene3D G3DSA:1.20.1050.40 23 156 3.0E-16 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal NHAM_RS17535 a10c14b84269ed285e365ee66e0ce0d4 696 Gene3D G3DSA:3.40.390.10 372 514 4.0E-51 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NHAM_RS17535 a10c14b84269ed285e365ee66e0ce0d4 696 SUPERFAMILY SSF55486 16 688 7.45E-186 T 22-04-2016 NHAM_RS17535 a10c14b84269ed285e365ee66e0ce0d4 696 Gene3D G3DSA:1.10.1370.10 515 689 9.1E-116 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 NHAM_RS17535 a10c14b84269ed285e365ee66e0ce0d4 696 Gene3D G3DSA:1.10.1370.10 157 362 9.1E-116 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 NHAM_RS17535 a10c14b84269ed285e365ee66e0ce0d4 696 PANTHER PTHR11804 16 691 0.0 T 22-04-2016 NHAM_RS17535 a10c14b84269ed285e365ee66e0ce0d4 696 PANTHER PTHR11804:SF47 16 691 0.0 T 22-04-2016 NHAM_RS17535 a10c14b84269ed285e365ee66e0ce0d4 696 Pfam PF01432 Peptidase family M3 239 688 2.0E-124 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 NHAM_RS22630 292b02de979bb2ebdb1ecdac394d41db 267 PANTHER PTHR11538 72 267 4.8E-66 T 22-04-2016 NHAM_RS22630 292b02de979bb2ebdb1ecdac394d41db 267 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 9 267 1.5E-73 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NHAM_RS22630 292b02de979bb2ebdb1ecdac394d41db 267 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 2 57 9.0E-17 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NHAM_RS22630 292b02de979bb2ebdb1ecdac394d41db 267 Pfam PF01409 tRNA synthetases class II core domain (F) 62 267 3.6E-72 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 NHAM_RS22630 292b02de979bb2ebdb1ecdac394d41db 267 SUPERFAMILY SSF46589 2 69 4.08E-14 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 NHAM_RS22630 292b02de979bb2ebdb1ecdac394d41db 267 PANTHER PTHR11538:SF40 72 267 4.8E-66 T 22-04-2016 NHAM_RS22630 292b02de979bb2ebdb1ecdac394d41db 267 SUPERFAMILY SSF55681 72 266 4.53E-51 T 22-04-2016 NHAM_RS22630 292b02de979bb2ebdb1ecdac394d41db 267 Gene3D G3DSA:3.30.930.10 2 267 5.3E-89 T 22-04-2016 NHAM_RS14860 25e8bc193f3afb3e4211b1b1f89d6725 643 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 129 581 1.8E-208 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 NHAM_RS14860 25e8bc193f3afb3e4211b1b1f89d6725 643 Pfam PF01964 Radical SAM ThiC family 130 577 3.7E-196 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 NHAM_RS14860 25e8bc193f3afb3e4211b1b1f89d6725 643 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 129 583 55.649 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 NHAM_RS14860 25e8bc193f3afb3e4211b1b1f89d6725 643 PANTHER PTHR30557:SF1 610 632 0.0 T 22-04-2016 NHAM_RS14860 25e8bc193f3afb3e4211b1b1f89d6725 643 PANTHER PTHR30557:SF1 180 593 0.0 T 22-04-2016 NHAM_RS14860 25e8bc193f3afb3e4211b1b1f89d6725 643 PANTHER PTHR30557:SF1 122 152 0.0 T 22-04-2016 NHAM_RS14860 25e8bc193f3afb3e4211b1b1f89d6725 643 PANTHER PTHR30557:SF1 4 88 0.0 T 22-04-2016 NHAM_RS14860 25e8bc193f3afb3e4211b1b1f89d6725 643 PANTHER PTHR30557 610 632 0.0 T 22-04-2016 NHAM_RS14860 25e8bc193f3afb3e4211b1b1f89d6725 643 PANTHER PTHR30557 180 593 0.0 T 22-04-2016 NHAM_RS14860 25e8bc193f3afb3e4211b1b1f89d6725 643 PANTHER PTHR30557 122 152 0.0 T 22-04-2016 NHAM_RS14860 25e8bc193f3afb3e4211b1b1f89d6725 643 PANTHER PTHR30557 4 88 0.0 T 22-04-2016 NHAM_RS14860 25e8bc193f3afb3e4211b1b1f89d6725 643 Pfam PF13667 ThiC-associated domain 19 90 1.7E-21 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 NHAM_RS09285 e71abb6a6ec89c83a82b863f47fa53d1 160 PANTHER PTHR30455:SF2 2 156 7.6E-65 T 22-04-2016 NHAM_RS09285 e71abb6a6ec89c83a82b863f47fa53d1 160 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 145 1.1E-51 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 NHAM_RS09285 e71abb6a6ec89c83a82b863f47fa53d1 160 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 86.942 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 NHAM_RS09285 e71abb6a6ec89c83a82b863f47fa53d1 160 PANTHER PTHR30455 2 156 7.6E-65 T 22-04-2016 NHAM_RS09285 e71abb6a6ec89c83a82b863f47fa53d1 160 Pfam PF03477 ATP cone domain 50 136 2.1E-20 T 22-04-2016 IPR005144 ATP-cone domain NHAM_RS15135 028b561f368c15b1012270867bd38382 118 Gene3D G3DSA:1.10.10.10 8 110 3.8E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS15135 028b561f368c15b1012270867bd38382 118 PANTHER PTHR30432 5 104 9.2E-21 T 22-04-2016 NHAM_RS15135 028b561f368c15b1012270867bd38382 118 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 85 7.1E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS15135 028b561f368c15b1012270867bd38382 118 SUPERFAMILY SSF46785 7 105 9.98E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04915 996aa07c1643821d2f9cd6024fe93dd2 210 Gene3D G3DSA:3.40.630.30 1 201 9.7E-54 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS04915 996aa07c1643821d2f9cd6024fe93dd2 210 PRINTS PR01549 Autoinducer synthesis protein signature 63 81 1.1E-11 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 NHAM_RS04915 996aa07c1643821d2f9cd6024fe93dd2 210 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 1.1E-11 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 NHAM_RS04915 996aa07c1643821d2f9cd6024fe93dd2 210 PRINTS PR01549 Autoinducer synthesis protein signature 119 140 1.1E-11 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 NHAM_RS04915 996aa07c1643821d2f9cd6024fe93dd2 210 PRINTS PR01549 Autoinducer synthesis protein signature 40 62 1.1E-11 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 NHAM_RS04915 996aa07c1643821d2f9cd6024fe93dd2 210 PRINTS PR01549 Autoinducer synthesis protein signature 95 107 1.1E-11 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 NHAM_RS04915 996aa07c1643821d2f9cd6024fe93dd2 210 SUPERFAMILY SSF55729 1 187 4.07E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS04915 996aa07c1643821d2f9cd6024fe93dd2 210 Pfam PF00765 Autoinducer synthase 14 186 4.7E-22 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 NHAM_RS04915 996aa07c1643821d2f9cd6024fe93dd2 210 PANTHER PTHR39322 2 187 2.0E-33 T 22-04-2016 NHAM_RS12670 022603b8560a006b4474da65f142d87a 130 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 20 124 4.9E-21 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family NHAM_RS12670 022603b8560a006b4474da65f142d87a 130 Pfam PF05119 Phage terminase, small subunit 29 122 1.0E-22 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family NHAM_RS11435 6b59c9175d0a8eb38ee5b57defde960f 132 Pfam PF03960 ArsC family 6 113 6.0E-20 T 22-04-2016 IPR006660 Arsenate reductase-like NHAM_RS11435 6b59c9175d0a8eb38ee5b57defde960f 132 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 115 4.8E-41 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 NHAM_RS11435 6b59c9175d0a8eb38ee5b57defde960f 132 PANTHER PTHR30041:SF0 1 132 7.1E-42 T 22-04-2016 NHAM_RS11435 6b59c9175d0a8eb38ee5b57defde960f 132 PANTHER PTHR30041 1 132 7.1E-42 T 22-04-2016 NHAM_RS11435 6b59c9175d0a8eb38ee5b57defde960f 132 Gene3D G3DSA:3.40.30.10 1 130 3.6E-53 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS11435 6b59c9175d0a8eb38ee5b57defde960f 132 SUPERFAMILY SSF52833 2 129 3.27E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS04785 e8a89f097d6cdb9e8e438c28c72e31ba 174 Pfam PF01883 Domain of unknown function DUF59 10 71 1.9E-13 T 22-04-2016 IPR002744 Domain of unknown function DUF59 NHAM_RS04785 e8a89f097d6cdb9e8e438c28c72e31ba 174 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 19 174 2.2E-55 T 22-04-2016 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit UniPathway: UPA00930 NHAM_RS04785 e8a89f097d6cdb9e8e438c28c72e31ba 174 SUPERFAMILY SSF117916 8 101 1.31E-25 T 22-04-2016 NHAM_RS20270 1cb99705738073396db3fa6acc3b9bef 67 PANTHER PTHR33609:SF1 24 67 3.3E-13 T 22-04-2016 NHAM_RS20270 1cb99705738073396db3fa6acc3b9bef 67 Pfam PF01527 Transposase 22 67 4.4E-10 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NHAM_RS20270 1cb99705738073396db3fa6acc3b9bef 67 PANTHER PTHR33609 24 67 3.3E-13 T 22-04-2016 NHAM_RS20270 1cb99705738073396db3fa6acc3b9bef 67 SUPERFAMILY SSF48295 16 67 1.31E-12 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS20270 1cb99705738073396db3fa6acc3b9bef 67 Gene3D G3DSA:1.10.10.10 16 67 2.1E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS18215 6c274266951eb87522a5931b76895705 216 Pfam PF02622 Uncharacterized ACR, COG1678 37 203 4.6E-48 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 NHAM_RS18215 6c274266951eb87522a5931b76895705 216 SUPERFAMILY SSF143456 27 216 1.16E-62 T 22-04-2016 NHAM_RS18215 6c274266951eb87522a5931b76895705 216 PANTHER PTHR30327 27 216 2.3E-62 T 22-04-2016 NHAM_RS18215 6c274266951eb87522a5931b76895705 216 PANTHER PTHR30327:SF1 27 216 2.3E-62 T 22-04-2016 NHAM_RS18215 6c274266951eb87522a5931b76895705 216 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 26 216 37.808 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 NHAM_RS18215 6c274266951eb87522a5931b76895705 216 Gene3D G3DSA:3.30.70.1300 69 159 3.0E-25 T 22-04-2016 NHAM_RS18215 6c274266951eb87522a5931b76895705 216 Gene3D G3DSA:3.40.1740.10 24 65 8.2E-35 T 22-04-2016 NHAM_RS18215 6c274266951eb87522a5931b76895705 216 Gene3D G3DSA:3.40.1740.10 160 206 8.2E-35 T 22-04-2016 NHAM_RS14350 9d90af1e4bbecd6d2e85d3f427a090d6 434 PANTHER PTHR37422 17 427 7.8E-154 T 22-04-2016 NHAM_RS14350 9d90af1e4bbecd6d2e85d3f427a090d6 434 PANTHER PTHR37422:SF1 17 427 7.8E-154 T 22-04-2016 NHAM_RS14350 9d90af1e4bbecd6d2e85d3f427a090d6 434 Pfam PF04932 O-Antigen ligase 215 364 6.9E-17 T 22-04-2016 IPR007016 O-antigen ligase-related NHAM_RS01480 58b1c25428918010c698f13cdfdedb75 207 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 192 1.7E-42 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 NHAM_RS01480 58b1c25428918010c698f13cdfdedb75 207 Pfam PF02545 Maf-like protein 6 192 1.3E-47 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 NHAM_RS01480 58b1c25428918010c698f13cdfdedb75 207 SUPERFAMILY SSF52972 5 192 4.58E-53 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like NHAM_RS01480 58b1c25428918010c698f13cdfdedb75 207 Hamap MF_00528 Septum formation protein Maf [maf]. 6 199 30.732 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 NHAM_RS01480 58b1c25428918010c698f13cdfdedb75 207 PIRSF PIRSF006305 2 199 1.8E-44 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 NHAM_RS01480 58b1c25428918010c698f13cdfdedb75 207 Gene3D G3DSA:3.90.950.10 6 194 1.1E-58 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like NHAM_RS11235 92a8c7e9f717e8dcc50e8b7ff2e4f72d 502 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 68 127 1.7E-6 T 22-04-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 NHAM_RS11235 92a8c7e9f717e8dcc50e8b7ff2e4f72d 502 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 488 1.9E-192 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 NHAM_RS11235 92a8c7e9f717e8dcc50e8b7ff2e4f72d 502 Pfam PF00361 Proton-conducting membrane transporter 134 421 1.5E-91 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NHAM_RS11235 92a8c7e9f717e8dcc50e8b7ff2e4f72d 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 1.4E-48 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NHAM_RS11235 92a8c7e9f717e8dcc50e8b7ff2e4f72d 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 1.4E-48 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NHAM_RS11235 92a8c7e9f717e8dcc50e8b7ff2e4f72d 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 1.4E-48 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NHAM_RS11235 92a8c7e9f717e8dcc50e8b7ff2e4f72d 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 1.4E-48 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NHAM_RS11235 92a8c7e9f717e8dcc50e8b7ff2e4f72d 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 1.4E-48 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 NHAM_RS11235 92a8c7e9f717e8dcc50e8b7ff2e4f72d 502 PANTHER PTHR22773 1 489 3.7E-218 T 22-04-2016 NHAM_RS11235 92a8c7e9f717e8dcc50e8b7ff2e4f72d 502 PANTHER PTHR22773:SF40 1 489 3.7E-218 T 22-04-2016 NHAM_RS17555 80ba6555d96135f7b0af64c4255ab291 141 Pfam PF14760 Rnk N-terminus 10 49 8.4E-12 T 22-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain NHAM_RS17555 80ba6555d96135f7b0af64c4255ab291 141 SUPERFAMILY SSF54534 57 130 7.59E-17 T 22-04-2016 NHAM_RS17555 80ba6555d96135f7b0af64c4255ab291 141 PANTHER PTHR30437 11 130 1.7E-27 T 22-04-2016 NHAM_RS17555 80ba6555d96135f7b0af64c4255ab291 141 PANTHER PTHR30437:SF5 11 130 1.7E-27 T 22-04-2016 NHAM_RS17555 80ba6555d96135f7b0af64c4255ab291 141 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 58 130 1.3E-19 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 NHAM_RS17555 80ba6555d96135f7b0af64c4255ab291 141 Gene3D G3DSA:1.10.286.20 9 49 1.8E-6 T 22-04-2016 NHAM_RS17555 80ba6555d96135f7b0af64c4255ab291 141 Gene3D G3DSA:3.10.50.30 56 130 2.6E-23 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 NHAM_RS12855 0dcedf9f27fde23be3cac269be034ec6 213 PANTHER PTHR10629 119 198 3.9E-22 T 22-04-2016 NHAM_RS12855 0dcedf9f27fde23be3cac269be034ec6 213 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 180 198 - T 22-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 NHAM_RS12855 0dcedf9f27fde23be3cac269be034ec6 213 SUPERFAMILY SSF53335 1 199 2.71E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS12855 0dcedf9f27fde23be3cac269be034ec6 213 Gene3D G3DSA:3.90.120.10 88 188 3.2E-29 T 22-04-2016 NHAM_RS12855 0dcedf9f27fde23be3cac269be034ec6 213 Gene3D G3DSA:3.90.120.10 2 51 3.2E-29 T 22-04-2016 NHAM_RS12855 0dcedf9f27fde23be3cac269be034ec6 213 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 196 1.4E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS03090 9c7fd57dfba87e99c2b4015792240b92 117 SUPERFAMILY SSF48403 19 98 1.18E-10 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain NHAM_RS03090 9c7fd57dfba87e99c2b4015792240b92 117 Gene3D G3DSA:1.25.40.20 10 101 1.7E-10 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain NHAM_RS03090 9c7fd57dfba87e99c2b4015792240b92 117 Pfam PF12796 Ankyrin repeats (3 copies) 30 102 9.0E-7 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain NHAM_RS03800 f5dd8a8fb5463f6e0337f550fc5a06d5 185 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 74 181 4.9E-33 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 NHAM_RS17215 8d875f2b165b3d14d23130bb2386be83 97 Pfam PF13670 Peptidase propeptide and YPEB domain 9 94 5.0E-5 T 22-04-2016 IPR025711 PepSY domain NHAM_RS14010 249133cf443133a6381b3f4853f95630 84 Pfam PF13467 Ribbon-helix-helix domain 6 68 1.6E-23 T 22-04-2016 IPR027373 Ribbon-helix-helix domain NHAM_RS03125 bdc7f8bf6bb6c1e422194d5319fdb0b3 381 Gene3D G3DSA:3.40.710.10 46 374 7.7E-60 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS03125 bdc7f8bf6bb6c1e422194d5319fdb0b3 381 SUPERFAMILY SSF56601 47 372 6.24E-60 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS03125 bdc7f8bf6bb6c1e422194d5319fdb0b3 381 PANTHER PTHR22935 29 381 1.9E-44 T 22-04-2016 NHAM_RS03125 bdc7f8bf6bb6c1e422194d5319fdb0b3 381 Pfam PF00144 Beta-lactamase 47 362 1.3E-53 T 22-04-2016 IPR001466 Beta-lactamase-related NHAM_RS20475 2540432abef00305362931a48db2b099 363 Gene3D G3DSA:1.20.120.380 245 335 4.6E-26 T 22-04-2016 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 NHAM_RS20475 2540432abef00305362931a48db2b099 363 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 95 312 1.4E-37 T 22-04-2016 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003918|GO:0006265 NHAM_RS20475 2540432abef00305362931a48db2b099 363 Gene3D G3DSA:3.90.15.10 101 230 2.6E-41 T 22-04-2016 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 NHAM_RS20475 2540432abef00305362931a48db2b099 363 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 135 154 8.0E-7 T 22-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 NHAM_RS20475 2540432abef00305362931a48db2b099 363 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 179 195 8.0E-7 T 22-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 NHAM_RS20475 2540432abef00305362931a48db2b099 363 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 244 258 8.0E-7 T 22-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 NHAM_RS20475 2540432abef00305362931a48db2b099 363 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 158 172 8.0E-7 T 22-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 NHAM_RS20475 2540432abef00305362931a48db2b099 363 SUPERFAMILY SSF55869 35 96 4.05E-22 T 22-04-2016 NHAM_RS20475 2540432abef00305362931a48db2b099 363 SUPERFAMILY SSF56349 91 317 4.12E-70 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS10450 2f97629886b343ab700cb338edc535d2 411 SUPERFAMILY SSF55073 278 401 5.1E-5 T 22-04-2016 IPR029787 Nucleotide cyclase NHAM_RS10450 2f97629886b343ab700cb338edc535d2 411 Gene3D G3DSA:3.30.70.270 275 408 1.4E-4 T 22-04-2016 NHAM_RS04175 ce6551a114f59d70f161a4231e7f2990 98 PANTHER PTHR30007 3 82 6.8E-18 T 22-04-2016 NHAM_RS04175 ce6551a114f59d70f161a4231e7f2990 98 PANTHER PTHR30007:SF0 3 82 6.8E-18 T 22-04-2016 NHAM_RS04175 ce6551a114f59d70f161a4231e7f2990 98 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 3 53 1.4E-17 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS18505 d6e77adccd517261345295ed935ffd0d 640 PANTHER PTHR30441 1 623 1.2E-60 T 22-04-2016 NHAM_RS18505 d6e77adccd517261345295ed935ffd0d 640 Pfam PF05170 AsmA family 3 175 2.0E-9 T 22-04-2016 IPR007844 AsmA NHAM_RS18505 d6e77adccd517261345295ed935ffd0d 640 Pfam PF13502 AsmA-like C-terminal region 336 538 2.6E-22 T 22-04-2016 IPR032712 AsmA-like, C-terminal NHAM_RS00315 bd90dff44a5ab94a3a289a8e55fe4725 225 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 213 38.354 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 NHAM_RS00315 bd90dff44a5ab94a3a289a8e55fe4725 225 SUPERFAMILY SSF51366 4 210 9.89E-54 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NHAM_RS00315 bd90dff44a5ab94a3a289a8e55fe4725 225 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 208 1.0E-37 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 NHAM_RS00315 bd90dff44a5ab94a3a289a8e55fe4725 225 PANTHER PTHR22854 4 219 8.4E-56 T 22-04-2016 NHAM_RS00315 bd90dff44a5ab94a3a289a8e55fe4725 225 PANTHER PTHR22854:SF6 4 219 8.4E-56 T 22-04-2016 NHAM_RS00315 bd90dff44a5ab94a3a289a8e55fe4725 225 Gene3D G3DSA:3.20.20.70 4 212 1.3E-58 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS19910 9725469ca3df689107beedce8f84840b 136 Pfam PF01609 Transposase DDE domain 10 128 3.8E-15 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS19910 9725469ca3df689107beedce8f84840b 136 PANTHER PTHR30007:SF0 11 134 7.7E-31 T 22-04-2016 NHAM_RS19910 9725469ca3df689107beedce8f84840b 136 PANTHER PTHR30007 11 134 7.7E-31 T 22-04-2016 NHAM_RS18375 36038e4721081eb576418e03a5d8ea8e 126 SUPERFAMILY SSF50104 1 118 4.91E-46 T 22-04-2016 IPR008991 Translation protein SH3-like domain NHAM_RS18375 36038e4721081eb576418e03a5d8ea8e 126 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18375 36038e4721081eb576418e03a5d8ea8e 126 PIRSF PIRSF002191 1 126 4.0E-54 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18375 36038e4721081eb576418e03a5d8ea8e 126 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 2.6E-46 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18375 36038e4721081eb576418e03a5d8ea8e 126 PANTHER PTHR15680 2 114 1.3E-56 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18375 36038e4721081eb576418e03a5d8ea8e 126 PRINTS PR00061 Ribosomal protein L19 signature 8 37 3.9E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18375 36038e4721081eb576418e03a5d8ea8e 126 PRINTS PR00061 Ribosomal protein L19 signature 38 67 3.9E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18375 36038e4721081eb576418e03a5d8ea8e 126 PRINTS PR00061 Ribosomal protein L19 signature 92 117 3.9E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18375 36038e4721081eb576418e03a5d8ea8e 126 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 29.865 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS18375 36038e4721081eb576418e03a5d8ea8e 126 Pfam PF01245 Ribosomal protein L19 2 117 3.3E-48 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS09490 6f2fe50f571c3ffa856859026bac2225 337 Pfam PF06527 TniQ 14 131 1.2E-10 T 22-04-2016 IPR009492 TniQ NHAM_RS04105 15b17b4d79d8f6c813890668473ef230 310 TIGRFAM TIGR00144 beta_RFAP_syn: beta-ribofuranosylaminobenzene 5'-phosphate synthase family 7 275 2.5E-36 T 22-04-2016 IPR004422 GHMP kinase group 1 MetaCyc: PWY-6148|UniPathway: UPA00065 NHAM_RS04105 15b17b4d79d8f6c813890668473ef230 310 PIRSF PIRSF004884 4 302 1.6E-43 T 22-04-2016 IPR004422 GHMP kinase group 1 MetaCyc: PWY-6148|UniPathway: UPA00065 NHAM_RS01315 e34d4942d036ce14d0c3b8cf01e44597 129 Pfam PF06170 Protein of unknown function (DUF983) 31 115 1.4E-31 T 22-04-2016 IPR009325 Protein of unknown function DUF983 NHAM_RS17735 e34d4942d036ce14d0c3b8cf01e44597 129 Pfam PF06170 Protein of unknown function (DUF983) 31 115 1.4E-31 T 22-04-2016 IPR009325 Protein of unknown function DUF983 NHAM_RS13215 ff59970382f3dc0d201cf34de4771b0a 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 6.2E-15 T 22-04-2016 NHAM_RS13215 ff59970382f3dc0d201cf34de4771b0a 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 6.2E-15 T 22-04-2016 NHAM_RS13215 ff59970382f3dc0d201cf34de4771b0a 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 306 6.2E-15 T 22-04-2016 NHAM_RS13215 ff59970382f3dc0d201cf34de4771b0a 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 322 6.2E-15 T 22-04-2016 NHAM_RS13215 ff59970382f3dc0d201cf34de4771b0a 400 Pfam PF01494 FAD binding domain 6 355 1.6E-26 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 NHAM_RS13215 ff59970382f3dc0d201cf34de4771b0a 400 Gene3D G3DSA:3.50.50.60 6 183 3.6E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13215 ff59970382f3dc0d201cf34de4771b0a 400 Gene3D G3DSA:3.50.50.60 278 366 3.6E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13215 ff59970382f3dc0d201cf34de4771b0a 400 SUPERFAMILY SSF51905 7 178 9.07E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13215 ff59970382f3dc0d201cf34de4771b0a 400 SUPERFAMILY SSF51905 278 382 9.07E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NHAM_RS13215 ff59970382f3dc0d201cf34de4771b0a 400 PANTHER PTHR13789 7 399 6.0E-140 T 22-04-2016 NHAM_RS13215 ff59970382f3dc0d201cf34de4771b0a 400 PANTHER PTHR13789:SF212 7 399 6.0E-140 T 22-04-2016 NHAM_RS13215 ff59970382f3dc0d201cf34de4771b0a 400 SUPERFAMILY SSF54373 183 284 1.49E-22 T 22-04-2016 NHAM_RS18410 5002021c5d219664a802f679d5aaf8f5 133 PANTHER PTHR41522 1 133 4.8E-36 T 22-04-2016 NHAM_RS18410 5002021c5d219664a802f679d5aaf8f5 133 SUPERFAMILY SSF55486 7 128 1.3E-31 T 22-04-2016 NHAM_RS18410 5002021c5d219664a802f679d5aaf8f5 133 Pfam PF06262 Zinicin-like metallopeptidase 32 128 3.8E-32 T 22-04-2016 IPR010428 Zinicin-like metallopeptidase NHAM_RS18410 5002021c5d219664a802f679d5aaf8f5 133 Gene3D G3DSA:3.40.390.10 96 123 1.3E-4 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NHAM_RS15705 8c5dbd059a46b8b7961e2743d9680b06 121 Pfam PF13358 DDE superfamily endonuclease 17 110 1.1E-11 T 22-04-2016 NHAM_RS00865 7ead5ebc3e60ca747590f8852a458ff1 198 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 135 187 4.3E-13 T 22-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal NHAM_RS00865 7ead5ebc3e60ca747590f8852a458ff1 198 Gene3D G3DSA:3.30.160.100 1 97 4.7E-20 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NHAM_RS00865 7ead5ebc3e60ca747590f8852a458ff1 198 SUPERFAMILY SSF69754 1 103 7.06E-22 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NHAM_RS00865 7ead5ebc3e60ca747590f8852a458ff1 198 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 7.1E-15 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NHAM_RS00865 7ead5ebc3e60ca747590f8852a458ff1 198 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 95 1.9E-12 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NHAM_RS00865 7ead5ebc3e60ca747590f8852a458ff1 198 PANTHER PTHR33231 1 191 8.7E-41 T 22-04-2016 NHAM_RS08675 a0b5039fbbdec646270c171d1107c4f2 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 225 251 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 NHAM_RS08675 a0b5039fbbdec646270c171d1107c4f2 280 PANTHER PTHR13773 15 263 5.5E-50 T 22-04-2016 NHAM_RS08675 a0b5039fbbdec646270c171d1107c4f2 280 PANTHER PTHR13773:SF0 15 263 5.5E-50 T 22-04-2016 NHAM_RS08675 a0b5039fbbdec646270c171d1107c4f2 280 Pfam PF01148 Cytidylyltransferase family 19 263 1.8E-51 T 22-04-2016 NHAM_RS09580 1515ce7a37c8d9c2941b1ed20e57a4ee 726 Gene3D G3DSA:3.40.1350.10 453 510 2.9E-6 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 NHAM_RS01125 5a75699642613cc68d50decc9153d711 411 PANTHER PTHR38592 1 389 1.0E-131 T 22-04-2016 NHAM_RS01125 5a75699642613cc68d50decc9153d711 411 PIRSF PIRSF028704 3 409 1.0E-152 T 22-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC NHAM_RS01125 5a75699642613cc68d50decc9153d711 411 Pfam PF10129 OpgC protein 32 387 1.2E-131 T 22-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC NHAM_RS10970 59fdeab72717471adb7186944e3db432 398 Pfam PF05272 Virulence-associated protein E 109 299 1.1E-64 T 22-04-2016 IPR007936 Virulence-associated E NHAM_RS10970 59fdeab72717471adb7186944e3db432 398 PANTHER PTHR34985 56 390 2.0E-44 T 22-04-2016 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 PANTHER PTHR30523 22 929 0.0 T 22-04-2016 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 SUPERFAMILY SSF51621 26 929 0.0 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 Gene3D G3DSA:1.20.1440.90 298 421 2.3E-25 T 22-04-2016 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 Pfam PF00311 Phosphoenolpyruvate carboxylase 152 929 5.3E-283 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 PANTHER PTHR30523:SF0 22 929 0.0 T 22-04-2016 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 156 167 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 582 594 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 155 168 8.2E-57 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 580 600 8.2E-57 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 756 782 8.2E-57 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 208 224 8.2E-57 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 622 651 8.2E-57 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 268 283 8.2E-57 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 418 438 8.2E-57 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NHAM_RS13790 eab34fb96bb893983ea3b3e93a90c667 929 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 15 929 19.363 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NHAM_RS24175 ceabeed03728dcb70bfed6eb0950da3e 103 Gene3D G3DSA:3.30.470.30 15 57 2.8E-9 T 22-04-2016 NHAM_RS24175 ceabeed03728dcb70bfed6eb0950da3e 103 SUPERFAMILY SSF56091 8 76 2.88E-13 T 22-04-2016 NHAM_RS14055 6135ae012f5d56e01a12dd574826cc58 269 SUPERFAMILY SSF141523 24 129 1.07E-26 T 22-04-2016 NHAM_RS14055 6135ae012f5d56e01a12dd574826cc58 269 PANTHER PTHR30582:SF12 1 223 7.9E-89 T 22-04-2016 NHAM_RS14055 6135ae012f5d56e01a12dd574826cc58 269 Pfam PF03734 L,D-transpeptidase catalytic domain 26 129 1.7E-18 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NHAM_RS14055 6135ae012f5d56e01a12dd574826cc58 269 Gene3D G3DSA:2.40.440.10 21 129 3.6E-24 T 22-04-2016 NHAM_RS14055 6135ae012f5d56e01a12dd574826cc58 269 PANTHER PTHR30582 1 223 7.9E-89 T 22-04-2016 NHAM_RS12565 32d8d99537ce476c09ef2265861139fb 397 SUPERFAMILY SSF55729 186 359 3.6E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS12565 32d8d99537ce476c09ef2265861139fb 397 Pfam PF13480 Acetyltransferase (GNAT) domain 191 341 1.5E-33 T 22-04-2016 NHAM_RS03170 826b7027fcb6d9a9e396c9bda1a5ef55 176 SUPERFAMILY SSF50324 4 174 7.59E-64 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NHAM_RS03170 826b7027fcb6d9a9e396c9bda1a5ef55 176 PANTHER PTHR10286 1 174 2.9E-67 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NHAM_RS03170 826b7027fcb6d9a9e396c9bda1a5ef55 176 Gene3D G3DSA:3.90.80.10 5 174 3.5E-57 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NHAM_RS03170 826b7027fcb6d9a9e396c9bda1a5ef55 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 9.3E-52 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NHAM_RS03170 826b7027fcb6d9a9e396c9bda1a5ef55 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.147 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 NHAM_RS03170 826b7027fcb6d9a9e396c9bda1a5ef55 176 PANTHER PTHR10286:SF15 1 174 2.9E-67 T 22-04-2016 NHAM_RS15690 ce675738aa46c1e956a44d4a244e75dc 211 Pfam PF13817 IS66 C-terminal element 161 199 2.3E-18 T 22-04-2016 NHAM_RS15690 ce675738aa46c1e956a44d4a244e75dc 211 PANTHER PTHR33678:SF3 1 200 1.8E-82 T 22-04-2016 NHAM_RS15690 ce675738aa46c1e956a44d4a244e75dc 211 Pfam PF03050 Transposase IS66 family 1 154 6.1E-53 T 22-04-2016 IPR004291 Transposase, IS66 NHAM_RS15690 ce675738aa46c1e956a44d4a244e75dc 211 PANTHER PTHR33678 1 200 1.8E-82 T 22-04-2016 NHAM_RS18450 0e4a910531725c018f88045b848407f5 261 Gene3D G3DSA:3.90.420.10 86 258 5.8E-48 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NHAM_RS18450 0e4a910531725c018f88045b848407f5 261 SUPERFAMILY SSF56524 56 260 2.62E-60 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NHAM_RS18450 0e4a910531725c018f88045b848407f5 261 Pfam PF00174 Oxidoreductase molybdopterin binding domain 105 250 3.1E-29 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 NHAM_RS18450 0e4a910531725c018f88045b848407f5 261 PANTHER PTHR19372:SF9 30 259 1.2E-119 T 22-04-2016 NHAM_RS18450 0e4a910531725c018f88045b848407f5 261 PANTHER PTHR19372 30 259 1.2E-119 T 22-04-2016 NHAM_RS10100 ee2646aab26b22134e217fa9a35b5d66 281 Pfam PF00149 Calcineurin-like phosphoesterase 1 240 1.0E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NHAM_RS10100 ee2646aab26b22134e217fa9a35b5d66 281 SUPERFAMILY SSF56300 1 119 8.2E-25 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS10100 ee2646aab26b22134e217fa9a35b5d66 281 SUPERFAMILY SSF56300 154 277 8.2E-25 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS10100 ee2646aab26b22134e217fa9a35b5d66 281 PANTHER PTHR37844 1 281 8.8E-23 T 22-04-2016 NHAM_RS10100 ee2646aab26b22134e217fa9a35b5d66 281 Gene3D G3DSA:3.60.21.10 221 252 1.1E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS10100 ee2646aab26b22134e217fa9a35b5d66 281 Gene3D G3DSA:3.60.21.10 1 70 1.1E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS10100 ee2646aab26b22134e217fa9a35b5d66 281 Gene3D G3DSA:3.60.21.10 147 183 1.1E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS15990 308239016d29b416e45e14348baedc35 88 Pfam PF00285 Citrate synthase, C-terminal domain 1 61 2.4E-9 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 NHAM_RS15990 308239016d29b416e45e14348baedc35 88 Gene3D G3DSA:1.10.230.10 1 61 3.2E-13 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain NHAM_RS15990 308239016d29b416e45e14348baedc35 88 SUPERFAMILY SSF48256 1 62 4.19E-12 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 NHAM_RS20330 49d267674a566351d8917effd12b462a 222 PANTHER PTHR30506 2 214 4.4E-71 T 22-04-2016 NHAM_RS20330 49d267674a566351d8917effd12b462a 222 PANTHER PTHR30506:SF3 2 214 4.4E-71 T 22-04-2016 NHAM_RS20330 49d267674a566351d8917effd12b462a 222 Pfam PF03458 UPF0126 domain 10 84 1.0E-18 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 NHAM_RS20330 49d267674a566351d8917effd12b462a 222 Pfam PF03458 UPF0126 domain 96 167 3.3E-20 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 NHAM_RS17530 aad7a60f737f7f6f740a277d2be9297c 131 SUPERFAMILY SSF161084 7 129 1.44E-23 T 22-04-2016 NHAM_RS17530 aad7a60f737f7f6f740a277d2be9297c 131 Gene3D G3DSA:1.20.120.550 30 123 8.1E-14 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain NHAM_RS17530 aad7a60f737f7f6f740a277d2be9297c 131 PANTHER PTHR35371 1 127 2.8E-28 T 22-04-2016 NHAM_RS17530 aad7a60f737f7f6f740a277d2be9297c 131 PANTHER PTHR35371:SF1 1 127 2.8E-28 T 22-04-2016 NHAM_RS17530 aad7a60f737f7f6f740a277d2be9297c 131 Pfam PF01124 MAPEG family 6 124 5.1E-20 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein NHAM_RS14690 d2286f70e9d151a87537796605808ab1 443 PANTHER PTHR23521 4 419 2.0E-96 T 22-04-2016 NHAM_RS14690 d2286f70e9d151a87537796605808ab1 443 SUPERFAMILY SSF103473 5 374 1.31E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS14690 d2286f70e9d151a87537796605808ab1 443 Pfam PF07690 Major Facilitator Superfamily 205 388 1.1E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS14690 d2286f70e9d151a87537796605808ab1 443 PANTHER PTHR23521:SF2 4 419 2.0E-96 T 22-04-2016 NHAM_RS14690 d2286f70e9d151a87537796605808ab1 443 Gene3D G3DSA:1.20.1250.20 7 180 4.2E-13 T 22-04-2016 NHAM_RS14690 d2286f70e9d151a87537796605808ab1 443 Gene3D G3DSA:1.20.1250.20 204 379 3.2E-21 T 22-04-2016 NHAM_RS02635 bec6afeeb322f2cb61dd74ec7cdd9543 245 SMART SM00318 22 142 0.0079 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold NHAM_RS02635 bec6afeeb322f2cb61dd74ec7cdd9543 245 Gene3D G3DSA:2.40.50.90 26 143 1.1E-8 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold NHAM_RS02635 bec6afeeb322f2cb61dd74ec7cdd9543 245 Pfam PF00565 Staphylococcal nuclease homologue 68 141 3.7E-6 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold NHAM_RS02635 bec6afeeb322f2cb61dd74ec7cdd9543 245 SUPERFAMILY SSF50199 25 145 3.14E-16 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold NHAM_RS20595 7e4b40fe0ee5fb74cb90a07ddbcce1b1 203 Gene3D G3DSA:1.10.3210.10 9 201 1.2E-67 T 22-04-2016 IPR006674 HD domain NHAM_RS20595 7e4b40fe0ee5fb74cb90a07ddbcce1b1 203 SUPERFAMILY SSF109604 11 201 8.28E-58 T 22-04-2016 NHAM_RS16150 c3253120dff837b479873517982213f8 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 272 39.387 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 NHAM_RS16150 c3253120dff837b479873517982213f8 285 Gene3D G3DSA:3.40.50.150 1 282 6.8E-99 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS16150 c3253120dff837b479873517982213f8 285 PANTHER PTHR37426:SF1 1 285 1.3E-133 T 22-04-2016 NHAM_RS16150 c3253120dff837b479873517982213f8 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 279 3.7E-74 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 NHAM_RS16150 c3253120dff837b479873517982213f8 285 PANTHER PTHR37426 1 285 1.3E-133 T 22-04-2016 NHAM_RS16150 c3253120dff837b479873517982213f8 285 SUPERFAMILY SSF53335 8 282 1.88E-83 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS09280 27954c589b7a248bfd8c59db068db5b4 434 Gene3D G3DSA:3.40.640.10 48 295 6.2E-105 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NHAM_RS09280 27954c589b7a248bfd8c59db068db5b4 434 PANTHER PTHR11680 14 432 2.8E-249 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 NHAM_RS09280 27954c589b7a248bfd8c59db068db5b4 434 Pfam PF00464 Serine hydroxymethyltransferase 19 396 1.1E-182 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 NHAM_RS09280 27954c589b7a248bfd8c59db068db5b4 434 SUPERFAMILY SSF53383 14 432 5.91E-178 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase NHAM_RS09280 27954c589b7a248bfd8c59db068db5b4 434 Gene3D G3DSA:3.90.1150.10 296 433 5.6E-53 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NHAM_RS09280 27954c589b7a248bfd8c59db068db5b4 434 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 18 433 53.115 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 NHAM_RS09280 27954c589b7a248bfd8c59db068db5b4 434 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 233 249 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 NHAM_RS09280 27954c589b7a248bfd8c59db068db5b4 434 PIRSF PIRSF000412 2 433 4.0E-169 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 NHAM_RS06450 4576ac9f8463075a00cf7231a9b42843 121 Pfam PF01527 Transposase 21 103 4.9E-12 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NHAM_RS06450 4576ac9f8463075a00cf7231a9b42843 121 Gene3D G3DSA:1.10.10.10 16 76 2.1E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS06450 4576ac9f8463075a00cf7231a9b42843 121 SUPERFAMILY SSF48295 17 79 4.71E-15 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS06450 4576ac9f8463075a00cf7231a9b42843 121 PANTHER PTHR33609 24 121 8.6E-33 T 22-04-2016 NHAM_RS06450 4576ac9f8463075a00cf7231a9b42843 121 PANTHER PTHR33609:SF1 24 121 8.6E-33 T 22-04-2016 NHAM_RS00820 e69d2fbf859c72eba8d1cc90ce670591 209 SUPERFAMILY SSF52540 1 204 2.16E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00820 e69d2fbf859c72eba8d1cc90ce670591 209 Hamap MF_00238 Cytidylate kinase [cmk]. 1 206 28.888 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 NHAM_RS00820 e69d2fbf859c72eba8d1cc90ce670591 209 Pfam PF02224 Cytidylate kinase 3 195 1.3E-50 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 NHAM_RS00820 e69d2fbf859c72eba8d1cc90ce670591 209 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 199 2.9E-49 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 NHAM_RS00820 e69d2fbf859c72eba8d1cc90ce670591 209 PANTHER PTHR21299 1 207 1.0E-43 T 22-04-2016 NHAM_RS00820 e69d2fbf859c72eba8d1cc90ce670591 209 Gene3D G3DSA:3.40.50.300 1 203 3.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS12230 9d326a9d096776ac5c4f858bfdfc0378 140 Pfam PF07750 GcrA cell cycle regulator 5 79 6.5E-5 T 22-04-2016 IPR011681 GcrA cell cycle regulator NHAM_RS05460 0f80db1dce263b0d33400c7bde726ac4 272 Pfam PF01226 Formate/nitrite transporter 21 264 3.4E-52 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 NHAM_RS05460 0f80db1dce263b0d33400c7bde726ac4 272 Gene3D G3DSA:1.20.1080.10 36 267 2.1E-53 T 22-04-2016 IPR023271 Aquaporin-like NHAM_RS05460 0f80db1dce263b0d33400c7bde726ac4 272 PANTHER PTHR30520 1 267 9.3E-47 T 22-04-2016 NHAM_RS18485 2eecb3824a7a9e5c6e403434827e17c0 300 SUPERFAMILY SSF51230 78 132 6.87E-5 T 22-04-2016 IPR011053 Single hybrid motif NHAM_RS18485 2eecb3824a7a9e5c6e403434827e17c0 300 Gene3D G3DSA:2.40.50.100 72 133 4.8E-10 T 22-04-2016 NHAM_RS18485 2eecb3824a7a9e5c6e403434827e17c0 300 PANTHER PTHR30097 98 300 7.9E-33 T 22-04-2016 NHAM_RS18485 2eecb3824a7a9e5c6e403434827e17c0 300 Pfam PF13437 HlyD family secretion protein 112 204 6.9E-9 T 22-04-2016 NHAM_RS12500 ab920fda93abe5a84066c7f866a66a63 250 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 14 101 1.1E-11 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 NHAM_RS12500 ab920fda93abe5a84066c7f866a66a63 250 PANTHER PTHR23344 1 246 1.7E-39 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 NHAM_RS12500 ab920fda93abe5a84066c7f866a66a63 250 PANTHER PTHR23344:SF20 1 246 1.7E-39 T 22-04-2016 NHAM_RS12500 ab920fda93abe5a84066c7f866a66a63 250 SUPERFAMILY SSF51695 12 241 1.44E-38 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NHAM_RS12500 ab920fda93abe5a84066c7f866a66a63 250 Gene3D G3DSA:3.20.20.190 12 236 5.2E-35 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NHAM_RS13450 16dfc52471cca642ebc35a3d75847e6c 137 Pfam PF05443 ROS/MUCR transcriptional regulator protein 9 130 4.0E-49 T 22-04-2016 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 NHAM_RS16360 e87286867b5c4030e5f53593e73d0678 276 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 271 1.6E-65 T 22-04-2016 IPR018648 Protein of unknown function DUF2076 NHAM_RS12030 0e1deaf89198c0a3b087831baecbbe1d 147 Pfam PF05239 PRC-barrel domain 45 100 1.6E-11 T 22-04-2016 IPR027275 PRC-barrel domain NHAM_RS12030 0e1deaf89198c0a3b087831baecbbe1d 147 SUPERFAMILY SSF50346 14 142 4.91E-27 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS12030 0e1deaf89198c0a3b087831baecbbe1d 147 Gene3D G3DSA:2.30.30.240 44 98 2.4E-13 T 22-04-2016 NHAM_RS12030 0e1deaf89198c0a3b087831baecbbe1d 147 PANTHER PTHR36505 30 141 4.3E-32 T 22-04-2016 NHAM_RS12030 0e1deaf89198c0a3b087831baecbbe1d 147 PANTHER PTHR36505:SF1 30 141 4.3E-32 T 22-04-2016 NHAM_RS07915 a30bc7c272b5399d044edc08f946b5cf 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.839 T 22-04-2016 IPR013005 50S ribosomal protein uL4 NHAM_RS07915 a30bc7c272b5399d044edc08f946b5cf 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 4.6E-69 T 22-04-2016 IPR013005 50S ribosomal protein uL4 NHAM_RS07915 a30bc7c272b5399d044edc08f946b5cf 206 SUPERFAMILY SSF52166 1 205 1.09E-71 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 NHAM_RS07915 a30bc7c272b5399d044edc08f946b5cf 206 PANTHER PTHR10746 1 204 4.6E-86 T 22-04-2016 IPR013005 50S ribosomal protein uL4 NHAM_RS07915 a30bc7c272b5399d044edc08f946b5cf 206 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 4.2E-62 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 NHAM_RS07915 a30bc7c272b5399d044edc08f946b5cf 206 Gene3D G3DSA:3.40.1370.10 59 205 1.4E-54 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 NHAM_RS20645 bed47fa5dd1f35771053fa05698f8c55 301 Pfam PF08401 Domain of unknown function (DUF1738) 7 127 1.9E-41 T 22-04-2016 IPR013610 Domain of unknown function DUF1738 NHAM_RS20645 bed47fa5dd1f35771053fa05698f8c55 301 PIRSF PIRSF037112 1 301 7.5E-115 T 22-04-2016 IPR017113 Antirestriction, ArdC NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 Gene3D G3DSA:3.20.20.10 29 248 3.2E-67 T 22-04-2016 IPR029066 PLP-binding barrel NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 PANTHER PTHR11482:SF6 1 380 6.7E-128 T 22-04-2016 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 263 3.8E-54 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 SUPERFAMILY SSF50621 233 378 4.6E-35 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 Gene3D G3DSA:2.40.37.10 249 378 3.5E-28 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 PANTHER PTHR11482 1 380 6.7E-128 T 22-04-2016 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 SUPERFAMILY SSF51419 26 265 2.91E-67 T 22-04-2016 IPR029066 PLP-binding barrel NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 68 80 1.1E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 253 272 1.1E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 170 183 1.1E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 48 66 1.1E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 271 378 5.3E-15 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 PRINTS PR01182 Ornithine decarboxylase signature 20 44 3.8E-20 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 PRINTS PR01182 Ornithine decarboxylase signature 46 73 3.8E-20 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 PRINTS PR01182 Ornithine decarboxylase signature 120 142 3.8E-20 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 PRINTS PR01182 Ornithine decarboxylase signature 322 332 3.8E-20 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 PRINTS PR01182 Ornithine decarboxylase signature 90 114 3.8E-20 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 NHAM_RS17545 92d1a2809faff44c059762de74905c66 380 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 48 66 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 NHAM_RS07635 5e121de9920b6e01fa10c93f6b8be074 248 PANTHER PTHR35809 17 240 1.3E-75 T 22-04-2016 NHAM_RS07635 5e121de9920b6e01fa10c93f6b8be074 248 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 28 237 38.409 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 NHAM_RS07635 5e121de9920b6e01fa10c93f6b8be074 248 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 55 238 1.7E-55 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 NHAM_RS07635 5e121de9920b6e01fa10c93f6b8be074 248 Pfam PF02666 Phosphatidylserine decarboxylase 63 233 9.8E-33 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 NHAM_RS07795 bbc2f7a154c7a7af9258ff9261b8767f 79 Pfam PF07238 PilZ domain 3 78 3.9E-8 T 22-04-2016 IPR009875 PilZ domain GO:0035438 NHAM_RS07795 bbc2f7a154c7a7af9258ff9261b8767f 79 SUPERFAMILY SSF141371 1 78 1.0E-9 T 22-04-2016 NHAM_RS07680 4708e496cbc2a515bff16fca005d91e9 310 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 28 310 2.0E-37 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 NHAM_RS07680 4708e496cbc2a515bff16fca005d91e9 310 PANTHER PTHR30606:SF2 10 310 1.1E-79 T 22-04-2016 NHAM_RS07680 4708e496cbc2a515bff16fca005d91e9 310 PANTHER PTHR30606 10 310 1.1E-79 T 22-04-2016 NHAM_RS01985 8325db083c41e63531b79cf393122ddd 369 PANTHER PTHR30465:SF66 73 364 1.8E-203 T 22-04-2016 NHAM_RS01985 8325db083c41e63531b79cf393122ddd 369 PANTHER PTHR30465:SF66 1 45 1.8E-203 T 22-04-2016 NHAM_RS01985 8325db083c41e63531b79cf393122ddd 369 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 362 1.1E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS01985 8325db083c41e63531b79cf393122ddd 369 PANTHER PTHR30465 73 364 1.8E-203 T 22-04-2016 NHAM_RS01985 8325db083c41e63531b79cf393122ddd 369 PANTHER PTHR30465 1 45 1.8E-203 T 22-04-2016 NHAM_RS01985 8325db083c41e63531b79cf393122ddd 369 SUPERFAMILY SSF161098 135 348 1.31E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS01985 8325db083c41e63531b79cf393122ddd 369 Gene3D G3DSA:1.10.3720.10 134 360 9.7E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS24180 d06101d0f9276926a81fb3bf68978e0b 69 SUPERFAMILY SSF50249 1 50 4.97E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS24180 d06101d0f9276926a81fb3bf68978e0b 69 Gene3D G3DSA:2.40.50.140 1 49 2.1E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS03590 e49885dfbe95f333c2c754ef1449160b 91 SUPERFAMILY SSF48295 12 91 3.66E-19 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS03590 e49885dfbe95f333c2c754ef1449160b 91 Gene3D G3DSA:1.10.10.10 10 91 1.8E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03590 e49885dfbe95f333c2c754ef1449160b 91 Pfam PF06627 Protein of unknown function (DUF1153) 7 90 6.6E-41 T 22-04-2016 IPR009534 Protein of unknown function DUF1153 NHAM_RS08450 68286b9916db5791f08014051b974235 114 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 28 94 2.4E-20 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor NHAM_RS08450 68286b9916db5791f08014051b974235 114 Pfam PF01809 Haemolytic domain 28 89 6.4E-24 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor NHAM_RS08450 68286b9916db5791f08014051b974235 114 SMART SM01234 22 89 1.4E-32 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor NHAM_RS08450 68286b9916db5791f08014051b974235 114 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 22 90 20.2 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor NHAM_RS08450 68286b9916db5791f08014051b974235 114 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 37 89 9.0E-26 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor NHAM_RS08450 68286b9916db5791f08014051b974235 114 PANTHER PTHR33383 18 114 4.5E-31 T 22-04-2016 NHAM_RS07820 1a6f933c815e433e66dd26c76f95f142 142 PANTHER PTHR11661 1 140 2.9E-64 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07820 1a6f933c815e433e66dd26c76f95f142 142 SMART SM00649 9 141 1.2E-76 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07820 1a6f933c815e433e66dd26c76f95f142 142 SUPERFAMILY SSF46906 68 140 4.58E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 NHAM_RS07820 1a6f933c815e433e66dd26c76f95f142 142 SUPERFAMILY SSF54747 3 73 9.81E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal NHAM_RS07820 1a6f933c815e433e66dd26c76f95f142 142 Gene3D G3DSA:1.10.10.250 73 140 2.5E-29 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 NHAM_RS07820 1a6f933c815e433e66dd26c76f95f142 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.5E-63 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 NHAM_RS07820 1a6f933c815e433e66dd26c76f95f142 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 7.2E-23 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 NHAM_RS07820 1a6f933c815e433e66dd26c76f95f142 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 29.068 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 NHAM_RS07820 1a6f933c815e433e66dd26c76f95f142 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 6.0E-17 T 22-04-2016 NHAM_RS07820 1a6f933c815e433e66dd26c76f95f142 142 Gene3D G3DSA:3.30.1550.10 2 72 6.4E-37 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal NHAM_RS07820 1a6f933c815e433e66dd26c76f95f142 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 67 2.2E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal NHAM_RS13700 4da62f3ed6bd782471cef74fcddba481 109 Pfam PF13473 Cupredoxin-like domain 12 106 1.2E-12 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain NHAM_RS13700 4da62f3ed6bd782471cef74fcddba481 109 PANTHER PTHR36507 14 109 5.3E-26 T 22-04-2016 NHAM_RS13700 4da62f3ed6bd782471cef74fcddba481 109 Gene3D G3DSA:2.60.40.420 13 109 1.0E-30 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS13700 4da62f3ed6bd782471cef74fcddba481 109 PANTHER PTHR36507:SF1 14 109 5.3E-26 T 22-04-2016 NHAM_RS13700 4da62f3ed6bd782471cef74fcddba481 109 SUPERFAMILY SSF49503 13 109 2.01E-27 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS22215 4ab4a84feaa6cfc9e8009de03fae3c10 82 Gene3D G3DSA:3.40.50.1100 1 81 4.0E-23 T 22-04-2016 NHAM_RS22215 4ab4a84feaa6cfc9e8009de03fae3c10 82 SUPERFAMILY SSF53686 3 82 8.73E-17 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NHAM_RS05915 f83127aa6bd5f3cc134954f9e149b45e 103 PANTHER PTHR24559:SF185 3 75 6.6E-19 T 22-04-2016 NHAM_RS05915 f83127aa6bd5f3cc134954f9e149b45e 103 Gene3D G3DSA:3.30.420.10 1 75 1.4E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS05915 f83127aa6bd5f3cc134954f9e149b45e 103 Pfam PF13683 Integrase core domain 9 74 1.1E-29 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS05915 f83127aa6bd5f3cc134954f9e149b45e 103 SUPERFAMILY SSF53098 2 76 1.84E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS05915 f83127aa6bd5f3cc134954f9e149b45e 103 PANTHER PTHR24559 3 75 6.6E-19 T 22-04-2016 NHAM_RS16770 2d749efe03f67cc1d4b618d586679dfb 178 PANTHER PTHR11603 11 173 6.3E-69 T 22-04-2016 NHAM_RS16770 2d749efe03f67cc1d4b618d586679dfb 178 Gene3D G3DSA:3.40.50.300 11 172 3.4E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16770 2d749efe03f67cc1d4b618d586679dfb 178 Pfam PF01202 Shikimate kinase 18 171 8.6E-10 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 NHAM_RS16770 2d749efe03f67cc1d4b618d586679dfb 178 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 12 167 5.8E-52 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 NHAM_RS16770 2d749efe03f67cc1d4b618d586679dfb 178 SUPERFAMILY SSF52540 12 172 3.78E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10160 3e37a00650e580fb5e4a4e9d7f545931 598 SUPERFAMILY SSF52540 15 102 7.48E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10160 3e37a00650e580fb5e4a4e9d7f545931 598 SUPERFAMILY SSF52540 143 330 7.48E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10160 3e37a00650e580fb5e4a4e9d7f545931 598 Gene3D G3DSA:3.40.50.300 129 330 9.9E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10160 3e37a00650e580fb5e4a4e9d7f545931 598 Gene3D G3DSA:3.40.50.300 15 85 9.9E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS10160 3e37a00650e580fb5e4a4e9d7f545931 598 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 236 328 9.7E-11 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 NHAM_RS08470 b173a895f65dfe3b27156263b9d1c2f2 147 PANTHER PTHR21256 12 143 8.3E-60 T 22-04-2016 NHAM_RS08470 b173a895f65dfe3b27156263b9d1c2f2 147 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 16 119 32.016 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 NHAM_RS08470 b173a895f65dfe3b27156263b9d1c2f2 147 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 42 115 7.5E-36 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 NHAM_RS08470 b173a895f65dfe3b27156263b9d1c2f2 147 SUPERFAMILY SSF141734 16 122 2.75E-47 T 22-04-2016 NHAM_RS08470 b173a895f65dfe3b27156263b9d1c2f2 147 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 65 115 7.0E-24 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 NHAM_RS19710 ed39c99675cd16ba6da325d6f747226f 112 SUPERFAMILY SSF47413 24 103 2.96E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS19710 ed39c99675cd16ba6da325d6f747226f 112 Gene3D G3DSA:1.10.260.40 24 87 1.2E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS19710 ed39c99675cd16ba6da325d6f747226f 112 Pfam PF13744 Helix-turn-helix domain 17 96 7.3E-26 T 22-04-2016 NHAM_RS19710 ed39c99675cd16ba6da325d6f747226f 112 SMART SM00530 38 94 6.0E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NHAM_RS03100 7db4d93fab11bbd6334eb9f1c0fce663 480 Pfam PF03432 Relaxase/Mobilisation nuclease domain 61 211 3.9E-11 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 NHAM_RS16915 546c730e42221e7273111eb7387e9a4e 562 SUPERFAMILY SSF53649 254 401 1.18E-8 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NHAM_RS16915 546c730e42221e7273111eb7387e9a4e 562 Pfam PF00884 Sulfatase 254 449 1.8E-10 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NHAM_RS01485 0f378e7d4a1cfd28677643084712d84c 60 Pfam PF03884 Domain of unknown function (DUF329) 14 58 9.4E-16 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 NHAM_RS01485 0f378e7d4a1cfd28677643084712d84c 60 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 9 57 16.986 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 NHAM_RS01485 0f378e7d4a1cfd28677643084712d84c 60 PANTHER PTHR36150 8 60 2.8E-15 T 22-04-2016 NHAM_RS01485 0f378e7d4a1cfd28677643084712d84c 60 Gene3D G3DSA:3.30.50.10 10 58 8.9E-21 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 NHAM_RS01485 0f378e7d4a1cfd28677643084712d84c 60 SUPERFAMILY SSF57716 12 58 5.99E-16 T 22-04-2016 NHAM_RS01485 0f378e7d4a1cfd28677643084712d84c 60 PANTHER PTHR36150:SF1 8 60 2.8E-15 T 22-04-2016 NHAM_RS08680 ad8482ef64551ca73b916f57fbde6570 407 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 19 144 2.0E-38 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS08680 ad8482ef64551ca73b916f57fbde6570 407 Gene3D G3DSA:3.40.50.720 14 162 9.9E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS08680 ad8482ef64551ca73b916f57fbde6570 407 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 19 398 43.251 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS08680 ad8482ef64551ca73b916f57fbde6570 407 PANTHER PTHR30525 3 407 5.7E-207 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS08680 ad8482ef64551ca73b916f57fbde6570 407 Gene3D G3DSA:1.10.1740.10 315 400 6.7E-25 T 22-04-2016 NHAM_RS08680 ad8482ef64551ca73b916f57fbde6570 407 SUPERFAMILY SSF69055 304 400 6.67E-28 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS08680 ad8482ef64551ca73b916f57fbde6570 407 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 17 396 2.4E-133 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS08680 ad8482ef64551ca73b916f57fbde6570 407 SUPERFAMILY SSF55347 138 276 4.25E-57 T 22-04-2016 NHAM_RS08680 ad8482ef64551ca73b916f57fbde6570 407 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 158 241 1.4E-37 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS08680 ad8482ef64551ca73b916f57fbde6570 407 Pfam PF13288 DXP reductoisomerase C-terminal domain 273 393 6.1E-39 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS08680 ad8482ef64551ca73b916f57fbde6570 407 PIRSF PIRSF006205 16 405 4.1E-147 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 NHAM_RS08680 ad8482ef64551ca73b916f57fbde6570 407 SUPERFAMILY SSF51735 17 162 9.67E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS13135 3767f8f53555bbf2ee6a8b27f4cb6a3b 114 Pfam PF07372 Protein of unknown function (DUF1491) 3 110 2.2E-34 T 22-04-2016 IPR009964 Protein of unknown function DUF1491 NHAM_RS08020 47e60362f774cf0b8d1b3f8193aedcbb 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 NHAM_RS08020 47e60362f774cf0b8d1b3f8193aedcbb 122 SUPERFAMILY SSF46946 2 121 1.35E-45 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 NHAM_RS08020 47e60362f774cf0b8d1b3f8193aedcbb 122 PANTHER PTHR10871 2 122 1.9E-64 T 22-04-2016 NHAM_RS08020 47e60362f774cf0b8d1b3f8193aedcbb 122 Gene3D G3DSA:1.10.8.50 2 72 4.1E-28 T 22-04-2016 NHAM_RS08020 47e60362f774cf0b8d1b3f8193aedcbb 122 PIRSF PIRSF002134 1 122 7.9E-44 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08020 47e60362f774cf0b8d1b3f8193aedcbb 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 3.6E-53 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08020 47e60362f774cf0b8d1b3f8193aedcbb 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 28.518 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08020 47e60362f774cf0b8d1b3f8193aedcbb 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 2.6E-30 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS08020 47e60362f774cf0b8d1b3f8193aedcbb 122 Gene3D G3DSA:4.10.910.10 74 122 1.2E-28 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal NHAM_RS20455 2950ed2e57a4bee762b9d10367d15d73 389 PANTHER PTHR33055 78 372 4.1E-27 T 22-04-2016 NHAM_RS20455 2950ed2e57a4bee762b9d10367d15d73 389 Pfam PF02371 Transposase IS116/IS110/IS902 family 259 338 5.8E-17 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS20455 2950ed2e57a4bee762b9d10367d15d73 389 PANTHER PTHR33055:SF3 78 372 4.1E-27 T 22-04-2016 NHAM_RS12690 4481185645af99561dd84ed1fde33e85 72 Pfam PF09926 Uncharacterized small protein (DUF2158) 13 56 1.7E-5 T 22-04-2016 IPR019226 Protein of unknown function DUF2158 NHAM_RS17430 e6d996628fa3a31729b443b555f244b4 110 Gene3D G3DSA:1.10.760.10 51 81 5.1E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS17430 e6d996628fa3a31729b443b555f244b4 110 SUPERFAMILY SSF46626 49 110 1.92E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS19130 958446cb56e3aed8b1e7c183b5ed63a3 341 PANTHER PTHR30472 5 337 7.5E-95 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 NHAM_RS19130 958446cb56e3aed8b1e7c183b5ed63a3 341 Gene3D G3DSA:1.10.3470.10 9 334 2.3E-93 T 22-04-2016 IPR029022 ABC transporter, BtuC-like NHAM_RS19130 958446cb56e3aed8b1e7c183b5ed63a3 341 SUPERFAMILY SSF81345 9 331 1.01E-72 T 22-04-2016 IPR029022 ABC transporter, BtuC-like NHAM_RS19130 958446cb56e3aed8b1e7c183b5ed63a3 341 Pfam PF01032 FecCD transport family 23 331 2.8E-83 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 NHAM_RS05745 78292c50a621415cfb82c690da2387dc 180 PANTHER PTHR35519 6 180 1.5E-42 T 22-04-2016 NHAM_RS05745 78292c50a621415cfb82c690da2387dc 180 Pfam PF13430 Domain of unknown function (DUF4112) 73 175 5.6E-34 T 22-04-2016 IPR025187 Protein of unknown function DUF4112 NHAM_RS06845 6a716c3942da7336840f2160601797c7 121 SUPERFAMILY SSF160214 62 102 3.53E-6 T 22-04-2016 IPR005186 FlaG protein NHAM_RS06845 6a716c3942da7336840f2160601797c7 121 Gene3D G3DSA:3.30.160.170 66 100 9.9E-5 T 22-04-2016 IPR005186 FlaG protein NHAM_RS07290 27ddebffa54907dd95d50e28cc3edb65 476 SUPERFAMILY SSF51126 341 453 1.49E-12 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS07290 27ddebffa54907dd95d50e28cc3edb65 476 SUPERFAMILY SSF51126 229 311 1.49E-12 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS07290 27ddebffa54907dd95d50e28cc3edb65 476 Pfam PF10983 Protein of unknown function (DUF2793) 23 109 2.7E-33 T 22-04-2016 IPR021251 Protein of unknown function DUF2793 NHAM_RS13895 ce4693185099741149727dad2295d7e9 180 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 119 171 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 NHAM_RS13895 ce4693185099741149727dad2295d7e9 180 Gene3D G3DSA:2.60.40.420 49 177 1.5E-23 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS13895 ce4693185099741149727dad2295d7e9 180 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 109 176 4.4E-7 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 NHAM_RS13895 ce4693185099741149727dad2295d7e9 180 PANTHER PTHR22888 88 177 6.8E-12 T 22-04-2016 NHAM_RS13895 ce4693185099741149727dad2295d7e9 180 SUPERFAMILY SSF49503 84 178 2.15E-21 T 22-04-2016 IPR008972 Cupredoxin NHAM_RS05945 5cbd62dad8f155905c038e3f2c5ebbb7 354 Pfam PF07568 Histidine kinase 161 234 1.6E-12 T 22-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain NHAM_RS05945 5cbd62dad8f155905c038e3f2c5ebbb7 354 SUPERFAMILY SSF55874 220 337 2.49E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS05945 5cbd62dad8f155905c038e3f2c5ebbb7 354 Gene3D G3DSA:3.30.565.10 219 335 1.1E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS09255 a885731a4972d44b8fbaa64dc624b258 556 Pfam PF04773 FecR protein 56 138 3.5E-7 T 22-04-2016 IPR006860 FecR protein NHAM_RS09255 a885731a4972d44b8fbaa64dc624b258 556 SUPERFAMILY SSF56925 387 552 6.75E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS14130 0dc5bb15b866a7d07e2cfe749162d495 451 Pfam PF13751 Transposase DDE domain 369 424 1.1E-5 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS14130 0dc5bb15b866a7d07e2cfe749162d495 451 PANTHER PTHR33803 1 435 1.9E-172 T 22-04-2016 NHAM_RS14130 0dc5bb15b866a7d07e2cfe749162d495 451 PANTHER PTHR33803:SF1 1 435 1.9E-172 T 22-04-2016 NHAM_RS14130 0dc5bb15b866a7d07e2cfe749162d495 451 Pfam PF05598 Transposase domain (DUF772) 54 125 5.5E-19 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS17305 562ad6264873890e39459ac3adceed66 233 SMART SM00862 145 221 1.8E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS17305 562ad6264873890e39459ac3adceed66 233 PANTHER PTHR26402:SF553 1 231 2.3E-125 T 22-04-2016 NHAM_RS17305 562ad6264873890e39459ac3adceed66 233 PANTHER PTHR26402 1 231 2.3E-125 T 22-04-2016 NHAM_RS17305 562ad6264873890e39459ac3adceed66 233 Gene3D G3DSA:1.10.10.10 124 224 3.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS17305 562ad6264873890e39459ac3adceed66 233 Gene3D G3DSA:3.40.50.2300 1 123 1.9E-35 T 22-04-2016 NHAM_RS17305 562ad6264873890e39459ac3adceed66 233 Pfam PF00072 Response regulator receiver domain 3 112 3.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS17305 562ad6264873890e39459ac3adceed66 233 SUPERFAMILY SSF52172 1 174 8.97E-39 T 22-04-2016 IPR011006 CheY-like superfamily NHAM_RS17305 562ad6264873890e39459ac3adceed66 233 SMART SM00448 1 112 3.2E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 NHAM_RS17305 562ad6264873890e39459ac3adceed66 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 221 5.9E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NHAM_RS19610 916f0f8c5354845a4009bf724632e3ca 167 Pfam PF09361 Phasin protein 84 149 5.0E-6 T 22-04-2016 IPR018968 Phasin NHAM_RS00995 bbb376687c5a4801d0efc939cd4999ae 72 Pfam PF07896 Protein of unknown function (DUF1674) 30 72 3.8E-17 T 22-04-2016 IPR012875 Protein of unknown function DUF1674 NHAM_RS00995 bbb376687c5a4801d0efc939cd4999ae 72 PANTHER PTHR28524 34 72 2.6E-20 T 22-04-2016 NHAM_RS00995 bbb376687c5a4801d0efc939cd4999ae 72 PANTHER PTHR28524:SF2 34 72 2.6E-20 T 22-04-2016 NHAM_RS04055 9caea30e6e37715eb2a2fc4cf6da401d 157 PANTHER PTHR33990 1 157 6.6E-103 T 22-04-2016 NHAM_RS04055 9caea30e6e37715eb2a2fc4cf6da401d 157 PANTHER PTHR33990:SF3 1 157 6.6E-103 T 22-04-2016 NHAM_RS04055 9caea30e6e37715eb2a2fc4cf6da401d 157 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 118 6.2E-48 T 22-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase NHAM_RS04055 9caea30e6e37715eb2a2fc4cf6da401d 157 Gene3D G3DSA:3.10.180.10 3 128 1.2E-41 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS04055 9caea30e6e37715eb2a2fc4cf6da401d 157 SUPERFAMILY SSF54593 3 155 1.49E-47 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS04055 9caea30e6e37715eb2a2fc4cf6da401d 157 PIRSF PIRSF021700 1 157 2.4E-65 T 22-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase NHAM_RS13855 0198eed9dcca23ca3b2a165a79210b96 424 Gene3D G3DSA:3.40.710.10 6 416 6.1E-92 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS13855 0198eed9dcca23ca3b2a165a79210b96 424 PANTHER PTHR22935:SF77 7 419 8.2E-121 T 22-04-2016 NHAM_RS13855 0198eed9dcca23ca3b2a165a79210b96 424 Pfam PF00144 Beta-lactamase 29 403 2.8E-70 T 22-04-2016 IPR001466 Beta-lactamase-related NHAM_RS13855 0198eed9dcca23ca3b2a165a79210b96 424 PANTHER PTHR22935 7 419 8.2E-121 T 22-04-2016 NHAM_RS13855 0198eed9dcca23ca3b2a165a79210b96 424 SUPERFAMILY SSF56601 17 415 2.51E-95 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS06970 253b2874374d80e91f4f4f851a814c67 794 Gene3D G3DSA:3.30.420.10 274 469 6.6E-20 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS06970 253b2874374d80e91f4f4f851a814c67 794 Pfam PF00665 Integrase core domain 276 416 1.9E-18 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS06970 253b2874374d80e91f4f4f851a814c67 794 SUPERFAMILY SSF53098 275 475 1.67E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS15305 e068c61c5a002f99a9146f086a08e1a5 311 SMART SM00342 226 311 9.8E-11 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NHAM_RS15305 e068c61c5a002f99a9146f086a08e1a5 311 Gene3D G3DSA:1.10.10.60 210 264 3.1E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS15305 e068c61c5a002f99a9146f086a08e1a5 311 PANTHER PTHR11019:SF54 210 311 3.8E-18 T 22-04-2016 NHAM_RS15305 e068c61c5a002f99a9146f086a08e1a5 311 PANTHER PTHR11019 210 311 3.8E-18 T 22-04-2016 NHAM_RS15305 e068c61c5a002f99a9146f086a08e1a5 311 Pfam PF12833 Helix-turn-helix domain 232 311 7.7E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NHAM_RS10860 b018c9b193beaf3c1e9ccb39e778d84b 122 PANTHER PTHR30007:SF0 7 106 1.8E-21 T 22-04-2016 NHAM_RS10860 b018c9b193beaf3c1e9ccb39e778d84b 122 PANTHER PTHR30007 7 106 1.8E-21 T 22-04-2016 NHAM_RS10860 b018c9b193beaf3c1e9ccb39e778d84b 122 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 7 77 2.5E-21 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS16720 b018c9b193beaf3c1e9ccb39e778d84b 122 PANTHER PTHR30007:SF0 7 106 1.8E-21 T 22-04-2016 NHAM_RS16720 b018c9b193beaf3c1e9ccb39e778d84b 122 PANTHER PTHR30007 7 106 1.8E-21 T 22-04-2016 NHAM_RS16720 b018c9b193beaf3c1e9ccb39e778d84b 122 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 7 77 2.5E-21 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS19715 8b4df49e78249afe58237df31c4b72b2 437 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 180 422 4.2E-69 T 22-04-2016 IPR019219 Protein of unknown function DUF2130 NHAM_RS11110 37812ed32d274a9ba51ec72d700134c2 271 SUPERFAMILY SSF51621 7 256 1.03E-62 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS11110 37812ed32d274a9ba51ec72d700134c2 271 PANTHER PTHR21631:SF18 3 253 6.5E-84 T 22-04-2016 NHAM_RS11110 37812ed32d274a9ba51ec72d700134c2 271 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 247 8.0E-67 T 22-04-2016 NHAM_RS11110 37812ed32d274a9ba51ec72d700134c2 271 PANTHER PTHR21631 3 253 6.5E-84 T 22-04-2016 NHAM_RS11110 37812ed32d274a9ba51ec72d700134c2 271 Gene3D G3DSA:3.20.20.60 6 254 3.5E-59 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS21270 21177503776a524be52b56459961b2d7 69 SUPERFAMILY SSF47616 6 56 2.46E-15 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS21270 21177503776a524be52b56459961b2d7 69 Pfam PF00043 Glutathione S-transferase, C-terminal domain 11 51 4.8E-8 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal NHAM_RS21270 21177503776a524be52b56459961b2d7 69 Gene3D G3DSA:1.20.1050.10 7 54 2.0E-17 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS22805 7bd4c29426747eab223cca349cd83310 87 SUPERFAMILY SSF48019 7 86 1.31E-5 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 NHAM_RS20700 75a3da9c1ee907ca8d43f0edf95e2240 235 Gene3D G3DSA:3.10.560.10 162 230 3.6E-10 T 22-04-2016 NHAM_RS20700 75a3da9c1ee907ca8d43f0edf95e2240 235 PANTHER PTHR33619:SF2 1 227 1.1E-52 T 22-04-2016 NHAM_RS20700 75a3da9c1ee907ca8d43f0edf95e2240 235 PANTHER PTHR33619 1 227 1.1E-52 T 22-04-2016 NHAM_RS20700 75a3da9c1ee907ca8d43f0edf95e2240 235 Gene3D G3DSA:3.30.1950.10 90 160 1.1E-16 T 22-04-2016 NHAM_RS20700 75a3da9c1ee907ca8d43f0edf95e2240 235 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 156 3.0E-18 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 NHAM_RS20700 75a3da9c1ee907ca8d43f0edf95e2240 235 Pfam PF10531 SLBB domain 163 212 6.4E-9 T 22-04-2016 IPR019554 Soluble ligand binding domain NHAM_RS04775 4419e3ecb82ab4d90aec1b4a7d207c6c 94 PIRSF PIRSF030200 1 94 4.5E-44 T 22-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 NHAM_RS04775 4419e3ecb82ab4d90aec1b4a7d207c6c 94 Pfam PF06243 Phenylacetic acid degradation B 4 90 7.7E-40 T 22-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 NHAM_RS04775 4419e3ecb82ab4d90aec1b4a7d207c6c 94 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 5 94 2.1E-43 T 22-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 NHAM_RS11640 ddacf535c4a350ca91d3cce146df51d4 372 PANTHER PTHR32039 19 369 1.8E-105 T 22-04-2016 NHAM_RS11640 ddacf535c4a350ca91d3cce146df51d4 372 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 78 289 2.9E-65 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 NHAM_RS11640 ddacf535c4a350ca91d3cce146df51d4 372 Gene3D G3DSA:3.40.50.450 117 260 2.2E-11 T 22-04-2016 NHAM_RS11640 ddacf535c4a350ca91d3cce146df51d4 372 PANTHER PTHR32039:SF8 19 369 1.8E-105 T 22-04-2016 NHAM_RS11640 ddacf535c4a350ca91d3cce146df51d4 372 SUPERFAMILY SSF102405 88 290 1.98E-42 T 22-04-2016 NHAM_RS11640 ddacf535c4a350ca91d3cce146df51d4 372 Pfam PF02481 DNA recombination-mediator protein A 79 281 2.5E-72 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 NHAM_RS19435 c76c31ccdb2636f452214c124b7ab6b2 153 Pfam PF08808 RES domain 3 146 2.2E-20 T 22-04-2016 IPR014914 RES domain NHAM_RS19435 c76c31ccdb2636f452214c124b7ab6b2 153 SMART SM00953 14 142 7.0E-30 T 22-04-2016 IPR014914 RES domain NHAM_RS17740 1f9b9b43aff6d6d8b1121c43791d4a51 284 Gene3D G3DSA:1.20.120.80 76 273 2.7E-72 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 NHAM_RS17740 1f9b9b43aff6d6d8b1121c43791d4a51 284 PANTHER PTHR11403:SF7 1 276 8.1E-134 T 22-04-2016 NHAM_RS17740 1f9b9b43aff6d6d8b1121c43791d4a51 284 PANTHER PTHR11403 1 276 8.1E-134 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 NHAM_RS17740 1f9b9b43aff6d6d8b1121c43791d4a51 284 Gene3D G3DSA:1.10.287.70 5 73 2.7E-28 T 22-04-2016 NHAM_RS17740 1f9b9b43aff6d6d8b1121c43791d4a51 284 SUPERFAMILY SSF81452 6 273 4.06E-98 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 NHAM_RS17740 1f9b9b43aff6d6d8b1121c43791d4a51 284 Pfam PF00510 Cytochrome c oxidase subunit III 8 273 1.8E-100 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 NHAM_RS01310 1f9b9b43aff6d6d8b1121c43791d4a51 284 Gene3D G3DSA:1.20.120.80 76 273 2.7E-72 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 NHAM_RS01310 1f9b9b43aff6d6d8b1121c43791d4a51 284 PANTHER PTHR11403:SF7 1 276 8.1E-134 T 22-04-2016 NHAM_RS01310 1f9b9b43aff6d6d8b1121c43791d4a51 284 PANTHER PTHR11403 1 276 8.1E-134 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 NHAM_RS01310 1f9b9b43aff6d6d8b1121c43791d4a51 284 Gene3D G3DSA:1.10.287.70 5 73 2.7E-28 T 22-04-2016 NHAM_RS01310 1f9b9b43aff6d6d8b1121c43791d4a51 284 SUPERFAMILY SSF81452 6 273 4.06E-98 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 NHAM_RS01310 1f9b9b43aff6d6d8b1121c43791d4a51 284 Pfam PF00510 Cytochrome c oxidase subunit III 8 273 1.8E-100 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 NHAM_RS17525 b9767943ea69ee90e199d1bb1eb98054 345 Gene3D G3DSA:3.40.50.1400 19 223 5.9E-63 T 22-04-2016 NHAM_RS17525 b9767943ea69ee90e199d1bb1eb98054 345 Gene3D G3DSA:3.40.50.1400 224 342 4.2E-34 T 22-04-2016 NHAM_RS17525 b9767943ea69ee90e199d1bb1eb98054 345 SUPERFAMILY SSF53800 19 345 2.45E-98 T 22-04-2016 NHAM_RS17525 b9767943ea69ee90e199d1bb1eb98054 345 TIGRFAM TIGR00109 hemH: ferrochelatase 17 341 4.4E-87 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 NHAM_RS17525 b9767943ea69ee90e199d1bb1eb98054 345 Hamap MF_00323 Ferrochelatase [hemH]. 19 341 36.813 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 NHAM_RS17525 b9767943ea69ee90e199d1bb1eb98054 345 Pfam PF00762 Ferrochelatase 21 340 4.2E-103 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 NHAM_RS17525 b9767943ea69ee90e199d1bb1eb98054 345 PANTHER PTHR11108 18 342 1.3E-109 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 NHAM_RS17525 b9767943ea69ee90e199d1bb1eb98054 345 ProSitePatterns PS00534 Ferrochelatase signature. 210 230 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 NHAM_RS04240 42be49a21f8dc704c0ab809ecf4838c1 950 TIGRFAM TIGR02243 TIGR02243: putative baseplate assembly protein 622 901 2.9E-50 T 22-04-2016 IPR011749 Conserved hypothetical protein CHP02243 NHAM_RS12330 e41573d80ed33c0b34a892a1f9b246ac 202 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 2.8E-20 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal NHAM_RS12330 e41573d80ed33c0b34a892a1f9b246ac 202 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal NHAM_RS12330 e41573d80ed33c0b34a892a1f9b246ac 202 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 2.3E-34 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12330 e41573d80ed33c0b34a892a1f9b246ac 202 Gene3D G3DSA:3.10.430.100 62 146 1.5E-23 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal NHAM_RS12330 e41573d80ed33c0b34a892a1f9b246ac 202 Gene3D G3DSA:3.40.5.10 1 51 3.4E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal NHAM_RS12330 e41573d80ed33c0b34a892a1f9b246ac 202 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 1.2E-22 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal NHAM_RS12330 e41573d80ed33c0b34a892a1f9b246ac 202 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 22.574 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12330 e41573d80ed33c0b34a892a1f9b246ac 202 PANTHER PTHR21368 1 163 8.6E-42 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NHAM_RS12330 e41573d80ed33c0b34a892a1f9b246ac 202 SUPERFAMILY SSF55653 58 146 5.76E-23 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal NHAM_RS12330 e41573d80ed33c0b34a892a1f9b246ac 202 SUPERFAMILY SSF55658 1 56 2.27E-16 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal NHAM_RS13505 3cc1aaa1a32c69089da6507af6dd8e0b 154 SUPERFAMILY SSF51316 5 134 1.57E-42 T 22-04-2016 IPR011057 Mss4-like NHAM_RS13505 3cc1aaa1a32c69089da6507af6dd8e0b 154 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 31 114 1.9E-17 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 NHAM_RS13505 3cc1aaa1a32c69089da6507af6dd8e0b 154 PANTHER PTHR33337 1 129 1.0E-48 T 22-04-2016 NHAM_RS13505 3cc1aaa1a32c69089da6507af6dd8e0b 154 PANTHER PTHR33337:SF4 1 129 1.0E-48 T 22-04-2016 NHAM_RS13505 3cc1aaa1a32c69089da6507af6dd8e0b 154 Gene3D G3DSA:3.90.1590.10 5 154 2.1E-40 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 NHAM_RS15425 10f9396e7a7af8e704a20b38e301d290 357 Pfam PF14907 Uncharacterised nucleotidyltransferase 23 272 4.7E-30 T 22-04-2016 NHAM_RS12665 adcdf5a82663104a208f597f2006fe20 545 PANTHER PTHR41287 24 533 1.7E-71 T 22-04-2016 NHAM_RS12665 adcdf5a82663104a208f597f2006fe20 545 Pfam PF03354 Phage Terminase 52 514 4.9E-54 T 22-04-2016 IPR005021 Phage terminase NHAM_RS07085 a139f6c0133455d3711e8bad97b5dd21 266 Gene3D G3DSA:1.25.60.10 177 237 2.5E-5 T 22-04-2016 NHAM_RS07085 a139f6c0133455d3711e8bad97b5dd21 266 SUPERFAMILY SSF158791 178 241 1.15E-5 T 22-04-2016 NHAM_RS05245 432cc7ff832f3cff2fae22263eed253e 387 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 118 327 7.2E-15 T 22-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition NHAM_RS05245 432cc7ff832f3cff2fae22263eed253e 387 Gene3D G3DSA:3.40.630.30 179 333 4.5E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS05245 432cc7ff832f3cff2fae22263eed253e 387 SUPERFAMILY SSF55729 187 355 5.83E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS12720 1e59a6817f7578416d62a5f7ae9588dd 164 Pfam PF04586 Caudovirus prohead serine protease 6 145 4.0E-24 T 22-04-2016 IPR006433 Prohead protease NHAM_RS12720 1e59a6817f7578416d62a5f7ae9588dd 164 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 17 144 5.9E-22 T 22-04-2016 IPR006433 Prohead protease NHAM_RS08160 1c95b7adf5ba120d5da0828ed8cea3ac 117 PIRSF PIRSF033367 1 117 4.8E-37 T 22-04-2016 IPR017015 Uncharacterised conserved protein UCP033367, VanZ, Bll3170 NHAM_RS08160 1c95b7adf5ba120d5da0828ed8cea3ac 117 Pfam PF04892 VanZ like family 38 100 1.0E-6 T 22-04-2016 IPR006976 VanZ-like NHAM_RS09300 28dd2843ce48fb259bf4629eb0c3e41a 163 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 21 155 4.6E-33 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS09300 28dd2843ce48fb259bf4629eb0c3e41a 163 PANTHER PTHR21058 1 163 3.0E-50 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS09300 28dd2843ce48fb259bf4629eb0c3e41a 163 Gene3D G3DSA:3.40.50.960 8 158 6.0E-52 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS09300 28dd2843ce48fb259bf4629eb0c3e41a 163 SUPERFAMILY SSF52121 10 160 3.4E-50 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS09300 28dd2843ce48fb259bf4629eb0c3e41a 163 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 18 157 1.2E-45 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS09300 28dd2843ce48fb259bf4629eb0c3e41a 163 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 13 160 25.812 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 NHAM_RS00625 adc6900c272a0de2942425ee8f480c36 246 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 4 234 1.0E-79 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 NHAM_RS00625 adc6900c272a0de2942425ee8f480c36 246 PANTHER PTHR21235:SF15 1 240 3.0E-104 T 22-04-2016 NHAM_RS00625 adc6900c272a0de2942425ee8f480c36 246 SUPERFAMILY SSF51366 2 238 6.52E-72 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NHAM_RS00625 adc6900c272a0de2942425ee8f480c36 246 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 238 36.477 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 NHAM_RS00625 adc6900c272a0de2942425ee8f480c36 246 PANTHER PTHR21235 1 240 3.0E-104 T 22-04-2016 NHAM_RS00625 adc6900c272a0de2942425ee8f480c36 246 Gene3D G3DSA:3.20.20.70 3 239 1.8E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS00625 adc6900c272a0de2942425ee8f480c36 246 Pfam PF00977 Histidine biosynthesis protein 3 230 3.3E-80 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 NHAM_RS24085 e7b3498a52f376c48f12aa08f30d63cc 409 SUPERFAMILY SSF50969 135 216 2.04E-8 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NHAM_RS24085 e7b3498a52f376c48f12aa08f30d63cc 409 SUPERFAMILY SSF50969 283 379 2.04E-8 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NHAM_RS24085 e7b3498a52f376c48f12aa08f30d63cc 409 Pfam PF07007 Protein of unknown function (DUF1311) 16 107 2.2E-7 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 NHAM_RS24085 e7b3498a52f376c48f12aa08f30d63cc 409 Gene3D G3DSA:2.120.10.60 139 205 1.1E-5 T 22-04-2016 NHAM_RS24085 e7b3498a52f376c48f12aa08f30d63cc 409 Gene3D G3DSA:2.120.10.60 284 378 1.1E-5 T 22-04-2016 NHAM_RS20295 01285491d023b3dd322f62d05bc68dd1 124 Pfam PF13586 Transposase DDE domain 67 115 4.9E-11 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS20295 01285491d023b3dd322f62d05bc68dd1 124 PANTHER PTHR30007 1 122 2.0E-25 T 22-04-2016 NHAM_RS20295 01285491d023b3dd322f62d05bc68dd1 124 PANTHER PTHR30007:SF0 1 122 2.0E-25 T 22-04-2016 NHAM_RS17070 a0c6cd4e7fcd8e6d4e9a86b3a9b61189 160 Pfam PF14301 Domain of unknown function (DUF4376) 58 154 3.0E-17 T 22-04-2016 IPR025484 Domain of unknown function DUF4376 NHAM_RS08590 98154ab6304d23519006de0edc3acaa1 194 Pfam PF07298 NnrU protein 5 190 1.8E-55 T 22-04-2016 IPR009915 NnrU domain NHAM_RS19580 7c3f764fb5a79a25efe081088d1a3c8e 333 SUPERFAMILY SSF55874 228 324 2.65E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain NHAM_RS19580 7c3f764fb5a79a25efe081088d1a3c8e 333 Pfam PF08447 PAS fold 37 104 8.0E-7 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 NHAM_RS19580 7c3f764fb5a79a25efe081088d1a3c8e 333 SMART SM00911 140 227 1.9E-23 T 22-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 NHAM_RS19580 7c3f764fb5a79a25efe081088d1a3c8e 333 SUPERFAMILY SSF55785 22 130 3.66E-9 T 22-04-2016 IPR000014 PAS domain NHAM_RS19580 7c3f764fb5a79a25efe081088d1a3c8e 333 Pfam PF07536 HWE histidine kinase 140 226 9.2E-18 T 22-04-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 NHAM_RS19580 7c3f764fb5a79a25efe081088d1a3c8e 333 Gene3D G3DSA:3.30.450.20 14 135 1.5E-14 T 22-04-2016 NHAM_RS19580 7c3f764fb5a79a25efe081088d1a3c8e 333 PANTHER PTHR41523 20 326 1.7E-31 T 22-04-2016 NHAM_RS08595 bafff7ddacde64cc0dcf2ceb09510b01 275 PANTHER PTHR20881 4 271 2.2E-139 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 NHAM_RS08595 bafff7ddacde64cc0dcf2ceb09510b01 275 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 15 268 1.7E-90 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 NHAM_RS08595 bafff7ddacde64cc0dcf2ceb09510b01 275 Gene3D G3DSA:3.20.20.60 9 268 9.8E-109 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS08595 bafff7ddacde64cc0dcf2ceb09510b01 275 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 268 40.453 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 NHAM_RS08595 bafff7ddacde64cc0dcf2ceb09510b01 275 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 263 5.9E-104 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 NHAM_RS08595 bafff7ddacde64cc0dcf2ceb09510b01 275 SUPERFAMILY SSF51621 11 268 2.41E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NHAM_RS08595 bafff7ddacde64cc0dcf2ceb09510b01 275 PIRSF PIRSF000388 1 271 6.7E-104 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 NHAM_RS24145 1a848416977123f25d82c95c34569b39 227 PANTHER PTHR10516:SF316 35 111 3.2E-15 T 22-04-2016 NHAM_RS24145 1a848416977123f25d82c95c34569b39 227 PANTHER PTHR10516:SF316 161 173 3.2E-15 T 22-04-2016 NHAM_RS24145 1a848416977123f25d82c95c34569b39 227 SUPERFAMILY SSF54534 29 172 7.86E-29 T 22-04-2016 NHAM_RS24145 1a848416977123f25d82c95c34569b39 227 PANTHER PTHR10516 35 111 3.2E-15 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type NHAM_RS24145 1a848416977123f25d82c95c34569b39 227 PANTHER PTHR10516 161 173 3.2E-15 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type NHAM_RS24145 1a848416977123f25d82c95c34569b39 227 Gene3D G3DSA:3.10.50.40 158 172 1.0E-16 T 22-04-2016 NHAM_RS24145 1a848416977123f25d82c95c34569b39 227 Gene3D G3DSA:3.10.50.40 27 108 1.0E-16 T 22-04-2016 NHAM_RS24145 1a848416977123f25d82c95c34569b39 227 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 28 104 5.3E-11 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 NHAM_RS20355 cd614af426c65de270e1f3c1d1f0e928 245 PANTHER PTHR30353 43 244 1.3E-45 T 22-04-2016 IPR032818 DedA family NHAM_RS20355 cd614af426c65de270e1f3c1d1f0e928 245 Pfam PF09335 SNARE associated Golgi protein 65 189 5.4E-16 T 22-04-2016 IPR032816 SNARE associated Golgi protein NHAM_RS20355 cd614af426c65de270e1f3c1d1f0e928 245 PANTHER PTHR30353:SF2 43 244 1.3E-45 T 22-04-2016 NHAM_RS01760 c781fd5567d98a11c063315a2d92da8c 177 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 20 156 6.2E-36 T 22-04-2016 IPR006433 Prohead protease NHAM_RS01760 c781fd5567d98a11c063315a2d92da8c 177 Pfam PF04586 Caudovirus prohead serine protease 11 156 2.3E-35 T 22-04-2016 IPR006433 Prohead protease NHAM_RS01760 c781fd5567d98a11c063315a2d92da8c 177 SUPERFAMILY SSF50789 22 171 2.11E-8 T 22-04-2016 NHAM_RS01760 c781fd5567d98a11c063315a2d92da8c 177 Gene3D G3DSA:3.20.16.10 22 88 1.2E-4 T 22-04-2016 NHAM_RS02340 302dc02606ea7598c7bcc677ebfcdced 187 PANTHER PTHR19278 7 186 3.4E-52 T 22-04-2016 NHAM_RS02340 302dc02606ea7598c7bcc677ebfcdced 187 Pfam PF00156 Phosphoribosyl transferase domain 47 166 8.2E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 NHAM_RS02340 302dc02606ea7598c7bcc677ebfcdced 187 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 187 26.211 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS02340 302dc02606ea7598c7bcc677ebfcdced 187 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 18 182 1.0E-40 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 NHAM_RS02340 302dc02606ea7598c7bcc677ebfcdced 187 Gene3D G3DSA:3.40.50.2020 5 185 1.5E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS02340 302dc02606ea7598c7bcc677ebfcdced 187 SUPERFAMILY SSF53271 9 184 1.7E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like NHAM_RS16545 7605daa3f9a3d0190758bd06963665a0 220 SUPERFAMILY SSF52833 46 215 2.78E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS16545 7605daa3f9a3d0190758bd06963665a0 220 Pfam PF13462 Thioredoxin 49 215 1.3E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS16545 7605daa3f9a3d0190758bd06963665a0 220 PANTHER PTHR13887 2 220 2.1E-37 T 22-04-2016 NHAM_RS16545 7605daa3f9a3d0190758bd06963665a0 220 PANTHER PTHR13887:SF14 2 220 2.1E-37 T 22-04-2016 NHAM_RS16545 7605daa3f9a3d0190758bd06963665a0 220 Gene3D G3DSA:3.40.30.10 44 219 1.5E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS00885 386173eba33723529b210c77fd6e0c4d 333 SMART SM00382 121 308 2.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS00885 386173eba33723529b210c77fd6e0c4d 333 Pfam PF00005 ABC transporter 113 258 5.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS00885 386173eba33723529b210c77fd6e0c4d 333 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 97 333 4.2E-112 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 NHAM_RS00885 386173eba33723529b210c77fd6e0c4d 333 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 307 328 2.8E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NHAM_RS00885 386173eba33723529b210c77fd6e0c4d 333 ProSitePatterns PS00211 ABC transporters family signature. 230 244 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS00885 386173eba33723529b210c77fd6e0c4d 333 Gene3D G3DSA:3.40.50.300 90 324 1.1E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00885 386173eba33723529b210c77fd6e0c4d 333 SUPERFAMILY SSF52540 97 329 6.25E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00885 386173eba33723529b210c77fd6e0c4d 333 PANTHER PTHR24220:SF497 98 330 1.6E-140 T 22-04-2016 NHAM_RS00885 386173eba33723529b210c77fd6e0c4d 333 PANTHER PTHR24220 98 330 1.6E-140 T 22-04-2016 NHAM_RS01325 ab985436632d4fb92c75f69ba7998a01 429 Gene3D G3DSA:3.30.830.10 12 220 1.2E-57 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NHAM_RS01325 ab985436632d4fb92c75f69ba7998a01 429 SUPERFAMILY SSF63411 4 206 8.61E-58 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NHAM_RS01325 ab985436632d4fb92c75f69ba7998a01 429 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 34 57 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 NHAM_RS01325 ab985436632d4fb92c75f69ba7998a01 429 PANTHER PTHR11851 3 404 3.5E-136 T 22-04-2016 NHAM_RS01325 ab985436632d4fb92c75f69ba7998a01 429 Pfam PF05193 Peptidase M16 inactive domain 167 339 4.4E-40 T 22-04-2016 IPR007863 Peptidase M16, C-terminal NHAM_RS01325 ab985436632d4fb92c75f69ba7998a01 429 Pfam PF00675 Insulinase (Peptidase family M16) 14 160 4.2E-40 T 22-04-2016 IPR011765 Peptidase M16, N-terminal NHAM_RS01325 ab985436632d4fb92c75f69ba7998a01 429 SUPERFAMILY SSF63411 224 405 6.54E-47 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NHAM_RS01325 ab985436632d4fb92c75f69ba7998a01 429 Gene3D G3DSA:3.30.830.10 221 408 3.2E-59 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 NHAM_RS09710 5b86be6c6b6cfd746828de8a3a93422d 413 Pfam PF13194 Domain of unknown function (DUF4010) 182 389 4.3E-58 T 22-04-2016 IPR025105 Domain of unknown function DUF4010 NHAM_RS09710 5b86be6c6b6cfd746828de8a3a93422d 413 PANTHER PTHR39084 1 412 2.6E-53 T 22-04-2016 NHAM_RS09710 5b86be6c6b6cfd746828de8a3a93422d 413 Pfam PF02308 MgtC family 9 134 2.8E-17 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NHAM_RS01055 0616a983dcac080033f17fbc3ae1ccb7 197 SUPERFAMILY SSF52833 41 197 8.69E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS01055 0616a983dcac080033f17fbc3ae1ccb7 197 Gene3D G3DSA:3.40.30.10 24 196 1.6E-59 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS01055 0616a983dcac080033f17fbc3ae1ccb7 197 Pfam PF02630 SCO1/SenC 39 181 2.8E-41 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC NHAM_RS01055 0616a983dcac080033f17fbc3ae1ccb7 197 PANTHER PTHR12151 7 197 7.0E-61 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC NHAM_RS16140 2c966d5e3fddd04147533fc997cb0db5 206 PANTHER PTHR34001 7 206 3.3E-46 T 22-04-2016 NHAM_RS16140 2c966d5e3fddd04147533fc997cb0db5 206 Pfam PF13505 Outer membrane protein beta-barrel domain 11 206 1.4E-33 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel NHAM_RS16140 2c966d5e3fddd04147533fc997cb0db5 206 SUPERFAMILY SSF56925 40 206 1.23E-32 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS16140 2c966d5e3fddd04147533fc997cb0db5 206 Gene3D G3DSA:2.40.160.20 38 206 1.0E-37 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS09450 94e776a138bd68366de30150a07eb98c 423 Pfam PF02321 Outer membrane efflux protein 237 412 4.4E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NHAM_RS09450 94e776a138bd68366de30150a07eb98c 423 Pfam PF02321 Outer membrane efflux protein 32 213 2.8E-18 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NHAM_RS09450 94e776a138bd68366de30150a07eb98c 423 SUPERFAMILY SSF56954 7 414 1.7E-72 T 22-04-2016 NHAM_RS09450 94e776a138bd68366de30150a07eb98c 423 Gene3D G3DSA:1.20.1600.10 25 413 3.0E-51 T 22-04-2016 NHAM_RS09450 94e776a138bd68366de30150a07eb98c 423 PANTHER PTHR30203:SF1 8 415 1.9E-91 T 22-04-2016 NHAM_RS09450 94e776a138bd68366de30150a07eb98c 423 PANTHER PTHR30203 8 415 1.9E-91 T 22-04-2016 NHAM_RS08565 1ac39870f374821fdb565bbe23a7f4c4 214 PANTHER PTHR37298 3 214 1.1E-68 T 22-04-2016 NHAM_RS08565 1ac39870f374821fdb565bbe23a7f4c4 214 Pfam PF01865 Protein of unknown function DUF47 10 212 3.1E-46 T 22-04-2016 IPR018445 Putative phosphate transport regulator NHAM_RS10625 c108055312620dcd835fb7a93b3a3126 749 Pfam PF00665 Integrase core domain 328 440 7.9E-8 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS10625 c108055312620dcd835fb7a93b3a3126 749 SUPERFAMILY SSF53098 333 508 4.86E-9 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS10625 c108055312620dcd835fb7a93b3a3126 749 Gene3D G3DSA:3.30.420.10 329 500 1.4E-14 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS05905 4302af0337d4cd79c7e04d9d4c8d7422 176 PANTHER PTHR23022 6 168 5.3E-17 T 22-04-2016 NHAM_RS05905 4302af0337d4cd79c7e04d9d4c8d7422 176 Pfam PF13358 DDE superfamily endonuclease 7 148 1.5E-35 T 22-04-2016 NHAM_RS19140 0ecb029f99349227c2baa40e22e8ac43 161 SUPERFAMILY SSF52833 1 152 1.2E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS19140 0ecb029f99349227c2baa40e22e8ac43 161 Gene3D G3DSA:3.40.30.10 1 161 2.8E-56 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS19140 0ecb029f99349227c2baa40e22e8ac43 161 Pfam PF08534 Redoxin 4 158 8.0E-36 T 22-04-2016 IPR013740 Redoxin GO:0016491 NHAM_RS19140 0ecb029f99349227c2baa40e22e8ac43 161 PANTHER PTHR10430 1 161 3.3E-73 T 22-04-2016 NHAM_RS14485 ab4189d3476e01234dc7fc1c8c5f01c4 326 Pfam PF14415 Domain of unknown function (DUF4424) 26 312 2.3E-75 T 22-04-2016 IPR025538 Domain of unknown function DUF4424 NHAM_RS12995 97652385675058f672bbcd92bed0a433 349 Pfam PF00487 Fatty acid desaturase 59 305 1.1E-31 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 NHAM_RS12995 97652385675058f672bbcd92bed0a433 349 PANTHER PTHR19353:SF27 11 299 1.2E-129 T 22-04-2016 NHAM_RS12995 97652385675058f672bbcd92bed0a433 349 PANTHER PTHR19353 11 299 1.2E-129 T 22-04-2016 NHAM_RS05105 61dd3d0e8d429f9dba98e3e9e41c2895 252 Pfam PF13557 Putative MetA-pathway of phenol degradation 84 238 2.0E-7 T 22-04-2016 IPR025737 MetA-pathway of phenol degradation, putative NHAM_RS13685 3498756ba68b6f5f472bbeca002b191f 167 PANTHER PTHR30565 7 164 6.3E-57 T 22-04-2016 NHAM_RS13685 3498756ba68b6f5f472bbeca002b191f 167 Pfam PF05974 Domain of unknown function (DUF892) 8 164 3.5E-61 T 22-04-2016 IPR010287 Domain of unknown function DUF892 NHAM_RS13685 3498756ba68b6f5f472bbeca002b191f 167 Gene3D G3DSA:1.20.1260.10 4 164 1.3E-64 T 22-04-2016 IPR012347 Ferritin-related NHAM_RS13685 3498756ba68b6f5f472bbeca002b191f 167 SUPERFAMILY SSF47240 7 161 2.43E-53 T 22-04-2016 IPR009078 Ferritin-like superfamily NHAM_RS00830 7cba3e8a8c35ab916b8b592c8cc36b8f 137 TIGRFAM TIGR02300 FYDLN_acid: TIGR02300 family protein 1 133 8.0E-42 T 22-04-2016 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid NHAM_RS00830 7cba3e8a8c35ab916b8b592c8cc36b8f 137 Pfam PF09538 Protein of unknown function (FYDLN_acid) 2 118 2.6E-28 T 22-04-2016 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid NHAM_RS11395 50effa3756a67a3aa023b2b005f2fed5 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 2.1E-12 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain NHAM_RS11395 50effa3756a67a3aa023b2b005f2fed5 98 Gene3D G3DSA:3.30.70.900 1 96 1.3E-16 T 22-04-2016 NHAM_RS11395 50effa3756a67a3aa023b2b005f2fed5 98 SUPERFAMILY SSF54909 1 96 8.23E-32 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel NHAM_RS23505 15fbea4de6e0f2388adeb3965418bd1a 151 Pfam PF12705 PD-(D/E)XK nuclease superfamily 10 149 6.5E-11 T 22-04-2016 NHAM_RS23505 15fbea4de6e0f2388adeb3965418bd1a 151 Gene3D G3DSA:3.90.320.10 97 150 8.5E-4 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 NHAM_RS23505 15fbea4de6e0f2388adeb3965418bd1a 151 SUPERFAMILY SSF52980 9 150 9.12E-9 T 22-04-2016 IPR011335 Restriction endonuclease type II-like NHAM_RS17870 2f7c8eca6facd02aec02818cc3496e3c 190 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 184 1.5E-55 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 NHAM_RS17870 2f7c8eca6facd02aec02818cc3496e3c 190 Gene3D G3DSA:1.20.1200.10 16 188 1.3E-62 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 NHAM_RS17870 2f7c8eca6facd02aec02818cc3496e3c 190 Pfam PF01923 Cobalamin adenosyltransferase 7 173 1.5E-58 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 NHAM_RS17870 2f7c8eca6facd02aec02818cc3496e3c 190 PANTHER PTHR12213:SF0 1 184 2.8E-71 T 22-04-2016 NHAM_RS17870 2f7c8eca6facd02aec02818cc3496e3c 190 PANTHER PTHR12213 1 184 2.8E-71 T 22-04-2016 NHAM_RS17870 2f7c8eca6facd02aec02818cc3496e3c 190 SUPERFAMILY SSF89028 6 185 4.32E-58 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 NHAM_RS17870 2f7c8eca6facd02aec02818cc3496e3c 190 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 23 184 5.0E-90 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 NHAM_RS16285 7c792a83582002e6db6c3d40d594da01 75 Pfam PF09866 Uncharacterized protein conserved in bacteria (DUF2093) 24 65 6.3E-23 T 22-04-2016 IPR018661 Protein of unknown function DUF2093 NHAM_RS00280 9c73953ac332593daf7ca819848f08b2 1049 TIGRFAM TIGR02786 addB_alphas: double-strand break repair protein AddB 2 1039 0.0 T 22-04-2016 IPR014153 Double-strand break repair protein AddB NHAM_RS00280 9c73953ac332593daf7ca819848f08b2 1049 Pfam PF12705 PD-(D/E)XK nuclease superfamily 765 1008 1.2E-21 T 22-04-2016 NHAM_RS00280 9c73953ac332593daf7ca819848f08b2 1049 SUPERFAMILY SSF52540 351 747 1.46E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00955 be090c68dfef9d86d515171eee7e97fe 379 Pfam PF13480 Acetyltransferase (GNAT) domain 185 315 1.1E-16 T 22-04-2016 NHAM_RS00955 be090c68dfef9d86d515171eee7e97fe 379 SUPERFAMILY SSF55729 184 342 1.43E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS00955 be090c68dfef9d86d515171eee7e97fe 379 Gene3D G3DSA:3.40.630.30 168 329 3.3E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS00860 b71baac38b4bd268c5417050ee84aff5 153 PANTHER PTHR30505:SF6 1 146 7.9E-59 T 22-04-2016 NHAM_RS00860 b71baac38b4bd268c5417050ee84aff5 153 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- NHAM_RS00860 b71baac38b4bd268c5417050ee84aff5 153 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 8 145 1.7E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- NHAM_RS00860 b71baac38b4bd268c5417050ee84aff5 153 PANTHER PTHR30505 1 146 7.9E-59 T 22-04-2016 NHAM_RS00860 b71baac38b4bd268c5417050ee84aff5 153 Gene3D G3DSA:3.40.930.10 1 145 2.7E-46 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- NHAM_RS00860 b71baac38b4bd268c5417050ee84aff5 153 SUPERFAMILY SSF55804 3 150 5.49E-42 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 NHAM_RS00860 b71baac38b4bd268c5417050ee84aff5 153 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 145 1.0E-45 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- NHAM_RS01235 1f429e9385a533e50a1e0e8d6fbd2c38 265 TIGRFAM TIGR02186 alph_Pro_TM: conserved hypothetical protein 13 265 1.7E-100 T 22-04-2016 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane NHAM_RS01235 1f429e9385a533e50a1e0e8d6fbd2c38 265 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 32 264 7.7E-81 T 22-04-2016 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane NHAM_RS00070 6e36d0803060723a0573f25f6ee4725c 164 Pfam PF00582 Universal stress protein family 17 152 6.6E-12 T 22-04-2016 IPR006016 UspA GO:0006950 NHAM_RS00070 6e36d0803060723a0573f25f6ee4725c 164 SUPERFAMILY SSF52402 15 152 1.0E-12 T 22-04-2016 NHAM_RS00070 6e36d0803060723a0573f25f6ee4725c 164 Gene3D G3DSA:3.40.50.620 15 152 2.0E-16 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS11230 a81dce6cc2f46ecbffa334b8ebedd35e 478 PANTHER PTHR22773 2 477 1.9E-178 T 22-04-2016 NHAM_RS11230 a81dce6cc2f46ecbffa334b8ebedd35e 478 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 8 467 18.573 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 NHAM_RS11230 a81dce6cc2f46ecbffa334b8ebedd35e 478 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 464 2.3E-150 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 NHAM_RS11230 a81dce6cc2f46ecbffa334b8ebedd35e 478 Pfam PF00361 Proton-conducting membrane transporter 126 417 3.7E-83 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 NHAM_RS11230 a81dce6cc2f46ecbffa334b8ebedd35e 478 PANTHER PTHR22773:SF41 2 477 1.9E-178 T 22-04-2016 NHAM_RS11545 0a906a3733c7008c9ef49a4d58c64f26 502 Pfam PF02530 Porin subfamily 25 494 2.3E-114 T 22-04-2016 IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 NHAM_RS07165 3c89596efd10b6790f227cada9a820bd 760 Gene3D G3DSA:3.40.710.10 283 671 7.8E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS07165 3c89596efd10b6790f227cada9a820bd 760 Gene3D G3DSA:1.10.3810.10 112 282 2.4E-66 T 22-04-2016 NHAM_RS07165 3c89596efd10b6790f227cada9a820bd 760 Pfam PF00905 Penicillin binding protein transpeptidase domain 374 619 1.1E-27 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NHAM_RS07165 3c89596efd10b6790f227cada9a820bd 760 Pfam PF00912 Transglycosylase 116 282 1.2E-59 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 NHAM_RS07165 3c89596efd10b6790f227cada9a820bd 760 SUPERFAMILY SSF56601 264 286 2.82E-112 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS07165 3c89596efd10b6790f227cada9a820bd 760 SUPERFAMILY SSF56601 313 663 2.82E-112 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like NHAM_RS07165 3c89596efd10b6790f227cada9a820bd 760 SUPERFAMILY SSF53955 98 308 6.19E-70 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS07165 3c89596efd10b6790f227cada9a820bd 760 PANTHER PTHR32282 34 665 2.2E-216 T 22-04-2016 NHAM_RS07165 3c89596efd10b6790f227cada9a820bd 760 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 121 657 1.3E-172 T 22-04-2016 NHAM_RS07165 3c89596efd10b6790f227cada9a820bd 760 PANTHER PTHR32282:SF5 34 665 2.2E-216 T 22-04-2016 NHAM_RS03115 8a6f1f94d224c5b5a1a1ed675548034d 250 Pfam PF07505 Protein of unknown function (DUF5131) 4 245 9.4E-99 T 22-04-2016 IPR011101 Protein of unknown function DUF5131 NHAM_RS19840 a7ba70749f9209fe270620a299897aae 139 SUPERFAMILY SSF47598 16 58 3.56E-9 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 NHAM_RS13375 d859e6723ee3f319aa1d0d9ad4c9a522 247 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NHAM_RS13375 d859e6723ee3f319aa1d0d9ad4c9a522 247 PANTHER PTHR24220 10 246 1.5E-129 T 22-04-2016 NHAM_RS13375 d859e6723ee3f319aa1d0d9ad4c9a522 247 Gene3D G3DSA:3.40.50.300 7 239 2.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13375 d859e6723ee3f319aa1d0d9ad4c9a522 247 Pfam PF00005 ABC transporter 24 170 6.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NHAM_RS13375 d859e6723ee3f319aa1d0d9ad4c9a522 247 SMART SM00382 33 222 1.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain NHAM_RS13375 d859e6723ee3f319aa1d0d9ad4c9a522 247 SUPERFAMILY SSF52540 7 241 3.75E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS13375 d859e6723ee3f319aa1d0d9ad4c9a522 247 PANTHER PTHR24220:SF568 10 246 1.5E-129 T 22-04-2016 NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 PANTHER PTHR19139:SF103 3 231 3.6E-73 T 22-04-2016 NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 Pfam PF00230 Major intrinsic protein 3 223 1.7E-49 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 SUPERFAMILY SSF81338 3 226 1.7E-66 T 22-04-2016 IPR023271 Aquaporin-like NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 Gene3D G3DSA:1.20.1080.10 3 228 2.2E-69 T 22-04-2016 IPR023271 Aquaporin-like NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 Hamap MF_01146 Aquaporin Z [aqpZ]. 3 230 35.495 T 22-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 TIGRFAM TIGR00861 MIP: MIP family channel proteins 8 223 2.1E-57 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 PANTHER PTHR19139 3 231 3.6E-73 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 PRINTS PR00783 Major intrinsic protein family signature 81 100 1.9E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 PRINTS PR00783 Major intrinsic protein family signature 206 226 1.9E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 PRINTS PR00783 Major intrinsic protein family signature 44 68 1.9E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 PRINTS PR00783 Major intrinsic protein family signature 167 189 1.9E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 PRINTS PR00783 Major intrinsic protein family signature 4 23 1.9E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 PRINTS PR00783 Major intrinsic protein family signature 137 155 1.9E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 NHAM_RS06295 77a9f548a7cc011637c59988db7db7a4 237 ProSitePatterns PS00221 MIP family signature. 62 70 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 NHAM_RS00085 50467038a4ee371a0eab08f1c2ce52f4 232 PANTHER PTHR11735:SF11 1 127 4.5E-38 T 22-04-2016 NHAM_RS00085 50467038a4ee371a0eab08f1c2ce52f4 232 PANTHER PTHR11735 1 127 4.5E-38 T 22-04-2016 NHAM_RS00085 50467038a4ee371a0eab08f1c2ce52f4 232 Gene3D G3DSA:3.30.420.40 1 137 1.2E-39 T 22-04-2016 NHAM_RS00085 50467038a4ee371a0eab08f1c2ce52f4 232 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 212 2.3E-48 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 NHAM_RS00085 50467038a4ee371a0eab08f1c2ce52f4 232 Pfam PF00814 Glycoprotease family 34 157 5.2E-30 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NHAM_RS00085 50467038a4ee371a0eab08f1c2ce52f4 232 SUPERFAMILY SSF53067 1 103 2.24E-27 T 22-04-2016 NHAM_RS03205 48db0e258cda7a0fa81626b6156f370e 162 SUPERFAMILY SSF46785 7 144 1.35E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03205 48db0e258cda7a0fa81626b6156f370e 162 Gene3D G3DSA:1.10.10.10 6 142 1.1E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03205 48db0e258cda7a0fa81626b6156f370e 162 PANTHER PTHR33164 1 151 8.3E-25 T 22-04-2016 NHAM_RS03205 48db0e258cda7a0fa81626b6156f370e 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 1.7E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS03205 48db0e258cda7a0fa81626b6156f370e 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 1.7E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS03205 48db0e258cda7a0fa81626b6156f370e 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 1.7E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS03205 48db0e258cda7a0fa81626b6156f370e 162 SMART SM00347 27 127 7.1E-19 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS03205 48db0e258cda7a0fa81626b6156f370e 162 Pfam PF01047 MarR family 34 91 2.0E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NHAM_RS20405 06dca6a803a6797d3599fbf8d568f2b1 220 SUPERFAMILY SSF53098 39 203 5.76E-17 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS20405 06dca6a803a6797d3599fbf8d568f2b1 220 Pfam PF01609 Transposase DDE domain 153 200 1.9E-5 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS23940 26e5b2ec38a94da1c3a47872df45cc4d 61 Gene3D G3DSA:3.90.1210.10 1 56 2.8E-17 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal NHAM_RS23940 26e5b2ec38a94da1c3a47872df45cc4d 61 SUPERFAMILY SSF51269 2 53 3.61E-12 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal NHAM_RS23940 26e5b2ec38a94da1c3a47872df45cc4d 61 Pfam PF08666 SAF domain 2 53 1.8E-4 T 22-04-2016 IPR013974 SAF domain NHAM_RS02050 13d80f9cb17d7a631f6f5adcf935dcc1 174 Pfam PF01478 Type IV leader peptidase family 10 112 2.9E-12 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 NHAM_RS02050 13d80f9cb17d7a631f6f5adcf935dcc1 174 PANTHER PTHR36506 2 173 2.0E-56 T 22-04-2016 NHAM_RS02050 13d80f9cb17d7a631f6f5adcf935dcc1 174 PANTHER PTHR36506:SF1 2 173 2.0E-56 T 22-04-2016 NHAM_RS23815 573f8e7eeb5a245f36428b84a01e93b9 242 Pfam PF04098 Rad52/22 family double-strand break repair protein 11 134 1.6E-12 T 22-04-2016 IPR007232 DNA repair protein Rad52/59/22 GO:0006281|GO:0006310 NHAM_RS14610 afc8e01649fdd79b4ac3dc525aa541ec 93 PANTHER PTHR40266 1 93 4.8E-41 T 22-04-2016 NHAM_RS14610 afc8e01649fdd79b4ac3dc525aa541ec 93 PANTHER PTHR40266:SF2 1 93 4.8E-41 T 22-04-2016 NHAM_RS14610 afc8e01649fdd79b4ac3dc525aa541ec 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 93 1.6E-18 T 22-04-2016 IPR007711 Toxin HigB-1 NHAM_RS14610 afc8e01649fdd79b4ac3dc525aa541ec 93 SUPERFAMILY SSF143011 1 93 1.28E-14 T 22-04-2016 NHAM_RS13710 bf4d264ed55ca09363b50b3c8dda6cdf 253 Pfam PF13490 Putative zinc-finger 3 36 8.9E-9 T 22-04-2016 IPR027383 Putative zinc-finger NHAM_RS15275 ca097ccb8349baac24d3333169eaf668 340 SUPERFAMILY SSF56784 70 321 1.02E-24 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS15275 ca097ccb8349baac24d3333169eaf668 340 Gene3D G3DSA:3.40.50.1000 168 311 2.3E-16 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS15275 ca097ccb8349baac24d3333169eaf668 340 Gene3D G3DSA:3.40.50.1000 70 85 2.3E-16 T 22-04-2016 IPR023214 HAD-like domain NHAM_RS15275 ca097ccb8349baac24d3333169eaf668 340 Pfam PF12710 haloacid dehalogenase-like hydrolase 72 277 4.3E-23 T 22-04-2016 NHAM_RS05475 0f162dcd58de3c5cf8a676bef9700b5e 209 Pfam PF10649 Protein of unknown function (DUF2478) 29 187 2.5E-48 T 22-04-2016 IPR018912 Protein of unknown function DUF2478 NHAM_RS03915 dfc25c7842312caf9e26375d9f4f01e7 305 Gene3D G3DSA:1.10.10.10 2 80 5.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03915 dfc25c7842312caf9e26375d9f4f01e7 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 56 1.5E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NHAM_RS03915 dfc25c7842312caf9e26375d9f4f01e7 305 SUPERFAMILY SSF46785 2 80 1.09E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS03915 dfc25c7842312caf9e26375d9f4f01e7 305 Gene3D G3DSA:3.40.190.10 173 256 1.3E-18 T 22-04-2016 NHAM_RS03915 dfc25c7842312caf9e26375d9f4f01e7 305 PANTHER PTHR30537:SF29 1 305 5.3E-145 T 22-04-2016 NHAM_RS03915 dfc25c7842312caf9e26375d9f4f01e7 305 Pfam PF03466 LysR substrate binding domain 82 288 3.4E-33 T 22-04-2016 IPR005119 LysR, substrate-binding NHAM_RS03915 dfc25c7842312caf9e26375d9f4f01e7 305 SUPERFAMILY SSF53850 82 291 1.71E-33 T 22-04-2016 NHAM_RS03915 dfc25c7842312caf9e26375d9f4f01e7 305 Gene3D G3DSA:3.40.190.10 87 172 5.6E-15 T 22-04-2016 NHAM_RS03915 dfc25c7842312caf9e26375d9f4f01e7 305 PANTHER PTHR30537 1 305 5.3E-145 T 22-04-2016 NHAM_RS15780 8e436f431f2a55c8cf5488eeadb34388 257 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 98 190 3.2E-9 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 NHAM_RS02605 69f8ceb1ea5c3a0efde63d8dd89de4ab 286 Pfam PF11306 Protein of unknown function (DUF3108) 26 271 2.6E-38 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 NHAM_RS08630 54859441794937913dba107a257bd647 251 Pfam PF05598 Transposase domain (DUF772) 53 125 1.3E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS02370 d62b6389bd3b63aac2e5284fba4f4748 175 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 79 90 - T 22-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 NHAM_RS02370 d62b6389bd3b63aac2e5284fba4f4748 175 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 55 175 3.0E-45 T 22-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal NHAM_RS02370 d62b6389bd3b63aac2e5284fba4f4748 175 Pfam PF13975 gag-polyprotein putative aspartyl protease 69 160 1.2E-24 T 22-04-2016 NHAM_RS02370 d62b6389bd3b63aac2e5284fba4f4748 175 PANTHER PTHR41535 1 175 4.6E-42 T 22-04-2016 NHAM_RS02370 d62b6389bd3b63aac2e5284fba4f4748 175 SUPERFAMILY SSF50630 59 162 1.95E-17 T 22-04-2016 IPR021109 Aspartic peptidase domain NHAM_RS02370 d62b6389bd3b63aac2e5284fba4f4748 175 PANTHER PTHR41535:SF1 1 175 4.6E-42 T 22-04-2016 NHAM_RS06345 372276a4d22338c7aa14866f1bbfe17e 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 254 3.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS06345 372276a4d22338c7aa14866f1bbfe17e 272 Gene3D G3DSA:1.10.3720.10 14 265 6.8E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS06345 372276a4d22338c7aa14866f1bbfe17e 272 PANTHER PTHR30222:SF6 22 257 5.5E-79 T 22-04-2016 NHAM_RS06345 372276a4d22338c7aa14866f1bbfe17e 272 SUPERFAMILY SSF161098 12 256 6.82E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NHAM_RS06345 372276a4d22338c7aa14866f1bbfe17e 272 PANTHER PTHR30222 22 257 5.5E-79 T 22-04-2016 NHAM_RS06575 65f3f256847c646e0c2e6bf3c7dfb656 299 Pfam PF13525 Outer membrane lipoprotein 57 253 6.2E-50 T 22-04-2016 NHAM_RS06575 65f3f256847c646e0c2e6bf3c7dfb656 299 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 23 267 7.3E-85 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD NHAM_RS06575 65f3f256847c646e0c2e6bf3c7dfb656 299 Gene3D G3DSA:1.25.40.10 58 251 1.4E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS06575 65f3f256847c646e0c2e6bf3c7dfb656 299 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 19 262 43.437 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD NHAM_RS06575 65f3f256847c646e0c2e6bf3c7dfb656 299 PANTHER PTHR37423 12 299 3.5E-98 T 22-04-2016 NHAM_RS06575 65f3f256847c646e0c2e6bf3c7dfb656 299 SUPERFAMILY SSF48452 91 253 3.36E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS06040 520f1a85c4f6ec03f2ed10c3a112737a 493 Pfam PF03237 Terminase-like family 62 454 2.7E-27 T 22-04-2016 IPR004921 Terminase, large subunit NHAM_RS06040 520f1a85c4f6ec03f2ed10c3a112737a 493 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 326 454 3.1E-20 T 22-04-2016 IPR006517 Archaeophage PsiM2, terminase large subunit NHAM_RS10200 17dfbf0a52c84b53371086a95a16432f 82 Pfam PF13358 DDE superfamily endonuclease 4 80 5.9E-14 T 22-04-2016 NHAM_RS11580 e9e2cc6b5afcc43f1b027a91e1ad6d39 463 SUPERFAMILY SSF52151 56 232 2.88E-31 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NHAM_RS11580 e9e2cc6b5afcc43f1b027a91e1ad6d39 463 SUPERFAMILY SSF52151 272 360 2.88E-31 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NHAM_RS11580 e9e2cc6b5afcc43f1b027a91e1ad6d39 463 Pfam PF01734 Patatin-like phospholipase 59 293 1.3E-19 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NHAM_RS11580 e9e2cc6b5afcc43f1b027a91e1ad6d39 463 Gene3D G3DSA:3.40.1090.10 59 237 1.2E-12 T 22-04-2016 NHAM_RS20675 cd2dc5bf40d44e1e95af2da35e5f0311 169 SUPERFAMILY SSF56349 12 72 2.59E-6 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS20675 cd2dc5bf40d44e1e95af2da35e5f0311 169 SUPERFAMILY SSF56349 117 156 2.59E-6 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS17720 46882247ae44353325cb1c5c3acf73e7 113 PANTHER PTHR36835 21 112 2.3E-21 T 22-04-2016 NHAM_RS17720 46882247ae44353325cb1c5c3acf73e7 113 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 20 112 1.6E-29 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 NHAM_RS17720 46882247ae44353325cb1c5c3acf73e7 113 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 25 98 7.3E-15 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 NHAM_RS23825 ccb3f4bb96ba042af3a947e0ad0152a0 125 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 20 77 1.8E-9 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family NHAM_RS15655 7e003769a94a73730900e29beca08d70 300 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 5 289 1.2E-100 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family NHAM_RS15655 7e003769a94a73730900e29beca08d70 300 Pfam PF04321 RmlD substrate binding domain 5 289 1.9E-104 T 22-04-2016 IPR029903 RmlD-like substrate binding domain NHAM_RS15655 7e003769a94a73730900e29beca08d70 300 PANTHER PTHR10491:SF4 1 288 2.3E-91 T 22-04-2016 NHAM_RS15655 7e003769a94a73730900e29beca08d70 300 Gene3D G3DSA:3.40.50.720 5 234 9.4E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS15655 7e003769a94a73730900e29beca08d70 300 PANTHER PTHR10491 1 288 2.3E-91 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family NHAM_RS15655 7e003769a94a73730900e29beca08d70 300 SUPERFAMILY SSF51735 5 292 7.07E-95 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS20320 6c0165ae2c6273c2ecab931a3d96f563 72 Pfam PF01710 Transposase 4 45 6.3E-5 T 22-04-2016 IPR002622 Transposase, Synechocystis PCC 6803 NHAM_RS20320 6c0165ae2c6273c2ecab931a3d96f563 72 Gene3D G3DSA:1.10.10.10 4 57 2.2E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS20320 6c0165ae2c6273c2ecab931a3d96f563 72 SUPERFAMILY SSF46689 1 65 1.52E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS10300 df16ebb81121ef3c98fc74e4519b0c9d 99 Pfam PF05135 Phage gp6-like head-tail connector protein 4 94 1.1E-21 T 22-04-2016 IPR021146 Phage gp6-like head-tail connector protein NHAM_RS10300 df16ebb81121ef3c98fc74e4519b0c9d 99 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 5 95 6.3E-10 T 22-04-2016 IPR006450 Phage protein of unkonwn function NHAM_RS00380 1e53215fd222b217b7f88c9d40badc83 171 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 171 27.185 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 NHAM_RS00380 1e53215fd222b217b7f88c9d40badc83 171 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 11 171 4.1E-63 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 NHAM_RS00380 1e53215fd222b217b7f88c9d40badc83 171 Gene3D G3DSA:3.10.20.80 5 81 1.2E-31 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 NHAM_RS00380 1e53215fd222b217b7f88c9d40badc83 171 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 10 79 2.4E-27 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 NHAM_RS00380 1e53215fd222b217b7f88c9d40badc83 171 SUPERFAMILY SSF54364 7 81 2.48E-26 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 NHAM_RS00380 1e53215fd222b217b7f88c9d40badc83 171 Gene3D G3DSA:3.30.110.10 82 170 3.8E-36 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 NHAM_RS00380 1e53215fd222b217b7f88c9d40badc83 171 PANTHER PTHR10938 3 171 4.7E-60 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 NHAM_RS00380 1e53215fd222b217b7f88c9d40badc83 171 ProSitePatterns PS00938 Initiation factor 3 signature. 61 74 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 NHAM_RS00380 1e53215fd222b217b7f88c9d40badc83 171 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 86 170 2.2E-36 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 NHAM_RS00380 1e53215fd222b217b7f88c9d40badc83 171 SUPERFAMILY SSF55200 87 170 6.02E-31 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 NHAM_RS03285 f4f206aeeaaa0c27fda3c15eac01e9e1 351 PANTHER PTHR34697 8 330 2.7E-70 T 22-04-2016 NHAM_RS03285 f4f206aeeaaa0c27fda3c15eac01e9e1 351 PANTHER PTHR34697:SF2 8 330 2.7E-70 T 22-04-2016 NHAM_RS03285 f4f206aeeaaa0c27fda3c15eac01e9e1 351 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 25 306 5.5E-9 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD NHAM_RS20560 62c8658a7e2025bc8d9702773f9fa508 125 SUPERFAMILY SSF46689 1 110 1.57E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS20560 62c8658a7e2025bc8d9702773f9fa508 125 Gene3D G3DSA:1.10.10.10 3 53 5.0E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS05900 62c8658a7e2025bc8d9702773f9fa508 125 SUPERFAMILY SSF46689 1 110 1.57E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS05900 62c8658a7e2025bc8d9702773f9fa508 125 Gene3D G3DSA:1.10.10.10 3 53 5.0E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS17640 62c8658a7e2025bc8d9702773f9fa508 125 SUPERFAMILY SSF46689 1 110 1.57E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS17640 62c8658a7e2025bc8d9702773f9fa508 125 Gene3D G3DSA:1.10.10.10 3 53 5.0E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04795 99f6122251d7547c466ef356f0bdbe23 250 PANTHER PTHR30458:SF0 21 250 6.7E-12 T 22-04-2016 NHAM_RS04795 99f6122251d7547c466ef356f0bdbe23 250 Gene3D G3DSA:1.20.1260.10 20 250 8.6E-23 T 22-04-2016 IPR012347 Ferritin-related NHAM_RS04795 99f6122251d7547c466ef356f0bdbe23 250 SUPERFAMILY SSF47240 27 250 8.11E-45 T 22-04-2016 IPR009078 Ferritin-like superfamily NHAM_RS04795 99f6122251d7547c466ef356f0bdbe23 250 PANTHER PTHR30458 21 250 6.7E-12 T 22-04-2016 NHAM_RS04795 99f6122251d7547c466ef356f0bdbe23 250 Pfam PF05138 Phenylacetic acid catabolic protein 19 250 1.2E-20 T 22-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 NHAM_RS14025 8a6cfb26496b26c3c7824ae96a1d5b82 171 PANTHER PTHR31793:SF2 22 159 5.1E-68 T 22-04-2016 NHAM_RS14025 8a6cfb26496b26c3c7824ae96a1d5b82 171 Gene3D G3DSA:3.10.129.10 15 151 1.7E-48 T 22-04-2016 IPR029069 HotDog domain NHAM_RS14025 8a6cfb26496b26c3c7824ae96a1d5b82 171 Pfam PF13279 Thioesterase-like superfamily 24 142 3.5E-20 T 22-04-2016 NHAM_RS14025 8a6cfb26496b26c3c7824ae96a1d5b82 171 PANTHER PTHR31793 22 159 5.1E-68 T 22-04-2016 NHAM_RS14025 8a6cfb26496b26c3c7824ae96a1d5b82 171 SUPERFAMILY SSF54637 21 167 1.41E-44 T 22-04-2016 IPR029069 HotDog domain NHAM_RS11810 503d5383ca453aacc03ab14c22478fb3 604 Pfam PF13687 Domain of unknown function (DUF4153) 162 403 7.3E-23 T 22-04-2016 IPR025291 Protein of unknown function DUF4153 NHAM_RS17730 b9c9c356fff6e6448016e216f9d0e874 249 PANTHER PTHR23427:SF6 15 248 3.2E-85 T 22-04-2016 NHAM_RS17730 b9c9c356fff6e6448016e216f9d0e874 249 PANTHER PTHR23427 15 248 3.2E-85 T 22-04-2016 NHAM_RS17730 b9c9c356fff6e6448016e216f9d0e874 249 Pfam PF02104 SURF1 family 18 232 1.2E-33 T 22-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 NHAM_RS05335 854824043cd0a7d405ba0987d84450a4 131 SUPERFAMILY SSF46689 3 93 3.23E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS05335 854824043cd0a7d405ba0987d84450a4 131 Pfam PF13384 Homeodomain-like domain 18 45 4.1E-6 T 22-04-2016 NHAM_RS05335 854824043cd0a7d405ba0987d84450a4 131 Gene3D G3DSA:1.10.10.60 19 107 1.8E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS13885 bec8cce5557954398af41dbe9b53a38b 205 Pfam PF02630 SCO1/SenC 50 187 3.2E-11 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC NHAM_RS13885 bec8cce5557954398af41dbe9b53a38b 205 PANTHER PTHR12151:SF0 2 204 2.6E-24 T 22-04-2016 NHAM_RS13885 bec8cce5557954398af41dbe9b53a38b 205 Gene3D G3DSA:3.40.30.10 48 202 8.5E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS13885 bec8cce5557954398af41dbe9b53a38b 205 SUPERFAMILY SSF52833 45 202 1.21E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS13885 bec8cce5557954398af41dbe9b53a38b 205 PANTHER PTHR12151 2 204 2.6E-24 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC NHAM_RS18040 8777e249ba14e6497b6dd378dfc53268 237 PANTHER PTHR30625 15 236 9.7E-63 T 22-04-2016 NHAM_RS18040 8777e249ba14e6497b6dd378dfc53268 237 PANTHER PTHR30625:SF3 15 236 9.7E-63 T 22-04-2016 NHAM_RS18040 8777e249ba14e6497b6dd378dfc53268 237 Pfam PF01618 MotA/TolQ/ExbB proton channel family 90 219 2.1E-40 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NHAM_RS18040 8777e249ba14e6497b6dd378dfc53268 237 TIGRFAM TIGR02796 tolQ: protein TolQ 19 231 4.8E-84 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 NHAM_RS16395 441ee73afc6ac3b19fc48eaff2907e81 135 Pfam PF03724 META domain 41 123 5.7E-7 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ NHAM_RS20795 a184e488af0880545865804a15fe6b70 134 Pfam PF03023 MviN-like protein 9 134 4.5E-27 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS20795 a184e488af0880545865804a15fe6b70 134 PRINTS PR01806 Virulence factor MviN signature 112 134 1.1E-16 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS20795 a184e488af0880545865804a15fe6b70 134 PRINTS PR01806 Virulence factor MviN signature 32 48 1.1E-16 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS20795 a184e488af0880545865804a15fe6b70 134 PRINTS PR01806 Virulence factor MviN signature 13 32 1.1E-16 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ NHAM_RS15580 6dae55de6a2431aa52ba730853bd9195 169 SUPERFAMILY SSF51161 3 153 5.41E-36 T 22-04-2016 IPR011004 Trimeric LpxA-like NHAM_RS15580 6dae55de6a2431aa52ba730853bd9195 169 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 110 138 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 NHAM_RS15580 6dae55de6a2431aa52ba730853bd9195 169 PANTHER PTHR23416:SF53 25 152 2.8E-31 T 22-04-2016 NHAM_RS15580 6dae55de6a2431aa52ba730853bd9195 169 PANTHER PTHR23416 25 152 2.8E-31 T 22-04-2016 NHAM_RS15580 6dae55de6a2431aa52ba730853bd9195 169 Gene3D G3DSA:2.160.10.10 3 153 2.9E-37 T 22-04-2016 NHAM_RS15580 6dae55de6a2431aa52ba730853bd9195 169 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 27 58 6.7E-6 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS15580 6dae55de6a2431aa52ba730853bd9195 169 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 136 1.5E-7 T 22-04-2016 IPR001451 Hexapeptide repeat NHAM_RS02595 7bc2cd9b1f2c9c6bca6728ec26cbdb17 289 Gene3D G3DSA:3.40.1090.10 17 184 1.1E-9 T 22-04-2016 NHAM_RS02595 7bc2cd9b1f2c9c6bca6728ec26cbdb17 289 SUPERFAMILY SSF52151 9 199 2.09E-46 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NHAM_RS02595 7bc2cd9b1f2c9c6bca6728ec26cbdb17 289 Pfam PF01734 Patatin-like phospholipase 14 182 1.7E-19 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NHAM_RS02595 7bc2cd9b1f2c9c6bca6728ec26cbdb17 289 PANTHER PTHR14226 10 191 6.5E-40 T 22-04-2016 NHAM_RS00965 f26082a0d27d173b0e33963d10fe8555 469 PANTHER PTHR23519 6 353 1.0E-80 T 22-04-2016 NHAM_RS00965 f26082a0d27d173b0e33963d10fe8555 469 PANTHER PTHR23519 373 462 1.0E-80 T 22-04-2016 NHAM_RS00965 f26082a0d27d173b0e33963d10fe8555 469 Gene3D G3DSA:1.20.1250.20 39 205 3.7E-8 T 22-04-2016 NHAM_RS00965 f26082a0d27d173b0e33963d10fe8555 469 Gene3D G3DSA:1.20.1250.20 257 457 1.1E-16 T 22-04-2016 NHAM_RS00965 f26082a0d27d173b0e33963d10fe8555 469 Pfam PF11700 Vacuole effluxer Atg22 like 74 466 8.8E-33 T 22-04-2016 IPR024671 Autophagy-related protein 22-like NHAM_RS00965 f26082a0d27d173b0e33963d10fe8555 469 SUPERFAMILY SSF103473 39 462 3.4E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS06180 b9b239010416a5e8e7236305fbf8d611 107 Pfam PF01609 Transposase DDE domain 1 96 1.5E-11 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS06180 b9b239010416a5e8e7236305fbf8d611 107 PANTHER PTHR30007 1 98 4.0E-20 T 22-04-2016 NHAM_RS06180 b9b239010416a5e8e7236305fbf8d611 107 PANTHER PTHR30007:SF0 1 98 4.0E-20 T 22-04-2016 NHAM_RS15900 e835cb3720010450d28f7baec1ddb880 153 Gene3D G3DSA:3.10.129.10 3 147 2.8E-34 T 22-04-2016 IPR029069 HotDog domain NHAM_RS15900 e835cb3720010450d28f7baec1ddb880 153 Pfam PF01575 MaoC like domain 18 112 6.1E-12 T 22-04-2016 IPR002539 MaoC-like domain NHAM_RS15900 e835cb3720010450d28f7baec1ddb880 153 SUPERFAMILY SSF54637 2 147 8.09E-32 T 22-04-2016 IPR029069 HotDog domain NHAM_RS15900 e835cb3720010450d28f7baec1ddb880 153 PANTHER PTHR13078 1 153 8.1E-38 T 22-04-2016 NHAM_RS00480 903b5104687bc280fb39082f8ed5963c 225 Pfam PF01168 Alanine racemase, N-terminal domain 31 225 3.5E-21 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 NHAM_RS00480 903b5104687bc280fb39082f8ed5963c 225 PIRSF PIRSF004848 2 225 6.0E-59 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 NHAM_RS00480 903b5104687bc280fb39082f8ed5963c 225 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 14 225 8.3E-46 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 NHAM_RS00480 903b5104687bc280fb39082f8ed5963c 225 SUPERFAMILY SSF51419 9 223 1.96E-68 T 22-04-2016 IPR029066 PLP-binding barrel NHAM_RS00480 903b5104687bc280fb39082f8ed5963c 225 Gene3D G3DSA:3.20.20.10 6 225 1.9E-74 T 22-04-2016 IPR029066 PLP-binding barrel NHAM_RS00480 903b5104687bc280fb39082f8ed5963c 225 PANTHER PTHR10146 13 225 3.8E-76 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 NHAM_RS11430 e5764450429c0f800a686863bda5c1e5 450 PANTHER PTHR11706 14 450 6.6E-216 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NHAM_RS11430 e5764450429c0f800a686863bda5c1e5 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 392 411 1.3E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NHAM_RS11430 e5764450429c0f800a686863bda5c1e5 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 332 351 1.3E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NHAM_RS11430 e5764450429c0f800a686863bda5c1e5 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 176 197 1.3E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NHAM_RS11430 e5764450429c0f800a686863bda5c1e5 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 123 149 1.3E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NHAM_RS11430 e5764450429c0f800a686863bda5c1e5 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 228 251 1.3E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NHAM_RS11430 e5764450429c0f800a686863bda5c1e5 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 151 170 1.3E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NHAM_RS11430 e5764450429c0f800a686863bda5c1e5 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 360 377 1.3E-62 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NHAM_RS11430 e5764450429c0f800a686863bda5c1e5 450 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 42 416 3.2E-121 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NHAM_RS11430 e5764450429c0f800a686863bda5c1e5 450 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 35 448 40.398 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NHAM_RS11430 e5764450429c0f800a686863bda5c1e5 450 Pfam PF01566 Natural resistance-associated macrophage protein 64 422 5.0E-134 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 NHAM_RS04120 1f27f22d28e49aaa3cceb86d39244fb4 183 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 8 117 3.0E-9 T 22-04-2016 IPR015032 MTH538 TIR-like domain NHAM_RS03160 06150f55690d5aa6d2ce509cd2d477c3 106 Gene3D G3DSA:3.30.1200.10 4 91 8.8E-21 T 22-04-2016 IPR003746 Protein of unknown function DUF167 NHAM_RS03160 06150f55690d5aa6d2ce509cd2d477c3 106 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 86 3.1E-22 T 22-04-2016 IPR003746 Protein of unknown function DUF167 NHAM_RS03160 06150f55690d5aa6d2ce509cd2d477c3 106 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 99 16.585 T 22-04-2016 IPR003746 Protein of unknown function DUF167 NHAM_RS03160 06150f55690d5aa6d2ce509cd2d477c3 106 SMART SM01152 7 88 1.4E-29 T 22-04-2016 IPR003746 Protein of unknown function DUF167 NHAM_RS03160 06150f55690d5aa6d2ce509cd2d477c3 106 SUPERFAMILY SSF69786 3 100 6.28E-22 T 22-04-2016 IPR003746 Protein of unknown function DUF167 NHAM_RS08310 1632516d85c73abc0a71d15d183a2f1d 447 Pfam PF13701 Transposase DDE domain group 1 12 438 1.8E-162 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS12375 1632516d85c73abc0a71d15d183a2f1d 447 Pfam PF13701 Transposase DDE domain group 1 12 438 1.8E-162 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS08250 2d39987120f13f4fa83fe12430fde039 667 SUPERFAMILY SSF53098 275 484 5.5E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS08250 2d39987120f13f4fa83fe12430fde039 667 Gene3D G3DSA:3.30.420.10 269 486 1.4E-22 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS17395 bf654f711a0ef91535a9079f5a27412d 214 Pfam PF03006 Haemolysin-III related 18 205 8.8E-27 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 NHAM_RS17395 bf654f711a0ef91535a9079f5a27412d 214 PANTHER PTHR20855:SF3 8 208 7.7E-43 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 NHAM_RS17395 bf654f711a0ef91535a9079f5a27412d 214 PANTHER PTHR20855 8 208 7.7E-43 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 NHAM_RS18240 4d363f60c398b17fadc939690d1dd124 384 Pfam PF01734 Patatin-like phospholipase 21 225 2.4E-23 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NHAM_RS18240 4d363f60c398b17fadc939690d1dd124 384 PANTHER PTHR14226 20 104 3.8E-120 T 22-04-2016 NHAM_RS18240 4d363f60c398b17fadc939690d1dd124 384 PANTHER PTHR14226 137 278 3.8E-120 T 22-04-2016 NHAM_RS18240 4d363f60c398b17fadc939690d1dd124 384 Pfam PF12536 Patatin phospholipase 262 364 3.7E-39 T 22-04-2016 IPR021095 Protein of unknown function DUF3734 NHAM_RS18240 4d363f60c398b17fadc939690d1dd124 384 PANTHER PTHR14226:SF31 20 104 3.8E-120 T 22-04-2016 NHAM_RS18240 4d363f60c398b17fadc939690d1dd124 384 PANTHER PTHR14226:SF31 137 278 3.8E-120 T 22-04-2016 NHAM_RS18240 4d363f60c398b17fadc939690d1dd124 384 SUPERFAMILY SSF52151 132 305 1.44E-50 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NHAM_RS18240 4d363f60c398b17fadc939690d1dd124 384 SUPERFAMILY SSF52151 18 90 1.44E-50 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NHAM_RS18240 4d363f60c398b17fadc939690d1dd124 384 Gene3D G3DSA:3.40.1090.10 17 91 7.4E-9 T 22-04-2016 NHAM_RS18240 4d363f60c398b17fadc939690d1dd124 384 Gene3D G3DSA:3.40.1090.10 128 228 7.4E-9 T 22-04-2016 NHAM_RS16970 4af01a4f61b78d3dda3ccc650449de65 317 SUPERFAMILY SSF56349 20 288 2.21E-25 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS16970 4af01a4f61b78d3dda3ccc650449de65 317 PANTHER PTHR30349 14 309 5.2E-26 T 22-04-2016 NHAM_RS16970 4af01a4f61b78d3dda3ccc650449de65 317 Pfam PF00589 Phage integrase family 160 268 1.1E-9 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS16970 4af01a4f61b78d3dda3ccc650449de65 317 Gene3D G3DSA:1.10.443.10 96 292 6.2E-21 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS16970 4af01a4f61b78d3dda3ccc650449de65 317 PANTHER PTHR30349:SF20 14 309 5.2E-26 T 22-04-2016 NHAM_RS15975 10bb91f253e7f6d1b02c81da0a3b6dc7 265 Gene3D G3DSA:3.40.50.620 142 263 8.1E-15 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NHAM_RS15975 10bb91f253e7f6d1b02c81da0a3b6dc7 265 Pfam PF00582 Universal stress protein family 142 263 2.7E-6 T 22-04-2016 IPR006016 UspA GO:0006950 NHAM_RS15975 10bb91f253e7f6d1b02c81da0a3b6dc7 265 SUPERFAMILY SSF52402 141 264 4.19E-18 T 22-04-2016 NHAM_RS01725 524e3d349dee7516e769b62b4a977a73 111 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 7 107 1.0E-5 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor NHAM_RS01725 524e3d349dee7516e769b62b4a977a73 111 Pfam PF05521 Phage head-tail joining protein 8 106 2.4E-18 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor NHAM_RS15165 8dafd29ea3aa8f421dad6fbb40c19f3b 505 PANTHER PTHR32057 1 505 9.8E-179 T 22-04-2016 NHAM_RS15165 8dafd29ea3aa8f421dad6fbb40c19f3b 505 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 17 491 45.024 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 NHAM_RS15165 8dafd29ea3aa8f421dad6fbb40c19f3b 505 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 20 474 2.2E-122 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 NHAM_RS08895 351818e47198e7a704c17b3f00c24700 403 Gene3D G3DSA:1.20.1250.20 218 394 2.7E-13 T 22-04-2016 NHAM_RS08895 351818e47198e7a704c17b3f00c24700 403 Gene3D G3DSA:1.20.1250.20 20 187 1.1E-24 T 22-04-2016 NHAM_RS08895 351818e47198e7a704c17b3f00c24700 403 SUPERFAMILY SSF103473 16 395 2.22E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS08895 351818e47198e7a704c17b3f00c24700 403 PANTHER PTHR23501 2 394 8.6E-55 T 22-04-2016 NHAM_RS08895 351818e47198e7a704c17b3f00c24700 403 Pfam PF07690 Major Facilitator Superfamily 21 247 1.1E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS08895 351818e47198e7a704c17b3f00c24700 403 PANTHER PTHR23501:SF48 2 394 8.6E-55 T 22-04-2016 NHAM_RS17550 ede42474c75bbbd18853746a6a2379ba 200 SUPERFAMILY SSF55729 18 143 3.14E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS17550 ede42474c75bbbd18853746a6a2379ba 200 Gene3D G3DSA:3.40.630.30 17 141 2.2E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS17550 ede42474c75bbbd18853746a6a2379ba 200 Pfam PF00583 Acetyltransferase (GNAT) family 68 138 2.1E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 NHAM_RS04125 2d2e63b12ef01f514e40097c017166d2 506 Pfam PF07508 Recombinase 185 281 3.9E-12 T 22-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 NHAM_RS04125 2d2e63b12ef01f514e40097c017166d2 506 SUPERFAMILY SSF53041 10 164 1.96E-37 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS04125 2d2e63b12ef01f514e40097c017166d2 506 Pfam PF00239 Resolvase, N terminal domain 12 164 2.6E-39 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS04125 2d2e63b12ef01f514e40097c017166d2 506 Gene3D G3DSA:3.40.50.1390 10 146 2.3E-33 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS04125 2d2e63b12ef01f514e40097c017166d2 506 SMART SM00857 11 164 2.0E-59 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS04125 2d2e63b12ef01f514e40097c017166d2 506 PANTHER PTHR30461:SF3 8 298 6.2E-56 T 22-04-2016 NHAM_RS04125 2d2e63b12ef01f514e40097c017166d2 506 PANTHER PTHR30461 8 298 6.2E-56 T 22-04-2016 NHAM_RS00035 531ed9bd20ea7b8e9f10673b42902834 248 Pfam PF14234 Domain of unknown function (DUF4336) 36 166 7.3E-9 T 22-04-2016 IPR025638 Protein of unknown function DUF4336 NHAM_RS00035 531ed9bd20ea7b8e9f10673b42902834 248 SUPERFAMILY SSF56281 19 245 8.12E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase NHAM_RS00035 531ed9bd20ea7b8e9f10673b42902834 248 PANTHER PTHR33835 19 247 7.6E-22 T 22-04-2016 NHAM_RS10495 f458423329801eb7157edc7913cfc27e 244 Pfam PF03942 DTW domain 20 219 2.6E-41 T 22-04-2016 IPR005636 DTW NHAM_RS10495 f458423329801eb7157edc7913cfc27e 244 SMART SM01144 16 224 2.4E-54 T 22-04-2016 IPR005636 DTW NHAM_RS10495 f458423329801eb7157edc7913cfc27e 244 PANTHER PTHR21392 17 243 1.3E-44 T 22-04-2016 NHAM_RS23975 44bd52d0b7dd7e24494bbb5558feaacb 92 SUPERFAMILY SSF141371 2 90 4.32E-6 T 22-04-2016 NHAM_RS18625 04750fc8149635061daa2f267619be1d 112 Pfam PF00037 4Fe-4S binding domain 34 55 1.6E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NHAM_RS18625 04750fc8149635061daa2f267619be1d 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.42E-18 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 NHAM_RS18625 04750fc8149635061daa2f267619be1d 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.42E-18 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 NHAM_RS18625 04750fc8149635061daa2f267619be1d 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.42E-18 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 NHAM_RS18625 04750fc8149635061daa2f267619be1d 112 Pfam PF11953 Domain of unknown function (DUF3470) 64 105 7.3E-19 T 22-04-2016 IPR022569 Ferredoxin, C-terminal NHAM_RS18625 04750fc8149635061daa2f267619be1d 112 PANTHER PTHR11938:SF101 1 82 9.9E-37 T 22-04-2016 NHAM_RS18625 04750fc8149635061daa2f267619be1d 112 PANTHER PTHR11938 1 82 9.9E-37 T 22-04-2016 NHAM_RS18625 04750fc8149635061daa2f267619be1d 112 Gene3D G3DSA:3.30.70.20 4 81 2.2E-20 T 22-04-2016 NHAM_RS18625 04750fc8149635061daa2f267619be1d 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NHAM_RS18625 04750fc8149635061daa2f267619be1d 112 SUPERFAMILY SSF54862 3 102 1.49E-24 T 22-04-2016 NHAM_RS01595 912514c79f9df51f4d0fdfa559d71bbb 112 SUPERFAMILY SSF103084 5 111 4.58E-25 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 NHAM_RS01595 912514c79f9df51f4d0fdfa559d71bbb 112 Gene3D G3DSA:3.30.1330.70 1 112 1.3E-26 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 NHAM_RS01595 912514c79f9df51f4d0fdfa559d71bbb 112 Pfam PF05866 Endodeoxyribonuclease RusA 18 109 1.0E-17 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 NHAM_RS12970 d9655f9150487dda1ee2599c262dfa21 252 Pfam PF13545 Crp-like helix-turn-helix domain 152 218 3.4E-14 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NHAM_RS12970 d9655f9150487dda1ee2599c262dfa21 252 PANTHER PTHR24567:SF22 12 232 1.2E-60 T 22-04-2016 NHAM_RS12970 d9655f9150487dda1ee2599c262dfa21 252 SUPERFAMILY SSF46785 151 224 1.42E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS12970 d9655f9150487dda1ee2599c262dfa21 252 PANTHER PTHR24567 12 232 1.2E-60 T 22-04-2016 NHAM_RS12970 d9655f9150487dda1ee2599c262dfa21 252 Gene3D G3DSA:2.60.120.10 13 140 1.2E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS12970 d9655f9150487dda1ee2599c262dfa21 252 Gene3D G3DSA:1.10.10.10 150 219 1.1E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS12970 d9655f9150487dda1ee2599c262dfa21 252 SUPERFAMILY SSF51206 12 129 3.66E-7 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like NHAM_RS11300 12c055add8536a86ee8f58252793b8a2 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 120 2.4E-38 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 NHAM_RS11300 12c055add8536a86ee8f58252793b8a2 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 19.264 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 NHAM_RS11300 12c055add8536a86ee8f58252793b8a2 121 PANTHER PTHR11058:SF10 1 121 8.9E-78 T 22-04-2016 NHAM_RS11300 12c055add8536a86ee8f58252793b8a2 121 PANTHER PTHR11058 1 121 8.9E-78 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 NHAM_RS02450 ab388934da765b770cda0fd4ba1cdd8e 155 Pfam PF03703 Bacterial PH domain 79 147 1.6E-13 T 22-04-2016 IPR005182 Domain of unknown function DUF304 NHAM_RS02450 ab388934da765b770cda0fd4ba1cdd8e 155 PANTHER PTHR37938 1 155 4.5E-38 T 22-04-2016 NHAM_RS05620 2574eba6963cad01ef3ced51587d0ecd 217 Gene3D G3DSA:1.20.1050.10 91 199 1.7E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS05620 2574eba6963cad01ef3ced51587d0ecd 217 PANTHER PTHR11260 3 192 6.7E-44 T 22-04-2016 NHAM_RS05620 2574eba6963cad01ef3ced51587d0ecd 217 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 75 1.7E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NHAM_RS05620 2574eba6963cad01ef3ced51587d0ecd 217 SUPERFAMILY SSF47616 78 196 1.5E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like NHAM_RS05620 2574eba6963cad01ef3ced51587d0ecd 217 SUPERFAMILY SSF52833 1 75 9.97E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS05620 2574eba6963cad01ef3ced51587d0ecd 217 Pfam PF00043 Glutathione S-transferase, C-terminal domain 131 192 1.5E-9 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal NHAM_RS05620 2574eba6963cad01ef3ced51587d0ecd 217 Gene3D G3DSA:3.40.30.10 1 90 2.5E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS12160 829e4415a26a63be8b449e5bc81cdbf6 125 Gene3D G3DSA:3.10.450.40 8 110 2.2E-32 T 22-04-2016 NHAM_RS12160 829e4415a26a63be8b449e5bc81cdbf6 125 SUPERFAMILY SSF160719 11 109 1.44E-27 T 22-04-2016 NHAM_RS12160 829e4415a26a63be8b449e5bc81cdbf6 125 PANTHER PTHR35862:SF2 7 98 3.1E-22 T 22-04-2016 NHAM_RS12160 829e4415a26a63be8b449e5bc81cdbf6 125 PANTHER PTHR35862 7 98 3.1E-22 T 22-04-2016 NHAM_RS12160 829e4415a26a63be8b449e5bc81cdbf6 125 Pfam PF04965 Gene 25-like lysozyme 18 83 1.5E-12 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD NHAM_RS04450 f462ba741e1ce8615cc35c40a72ed8a7 170 PANTHER PTHR11911 28 164 2.7E-26 T 22-04-2016 NHAM_RS04450 f462ba741e1ce8615cc35c40a72ed8a7 170 SUPERFAMILY SSF54631 28 165 2.4E-29 T 22-04-2016 NHAM_RS04450 f462ba741e1ce8615cc35c40a72ed8a7 170 SMART SM00116 40 87 1.1 T 22-04-2016 IPR000644 CBS domain NHAM_RS04450 f462ba741e1ce8615cc35c40a72ed8a7 170 SMART SM00116 105 152 5.2E-11 T 22-04-2016 IPR000644 CBS domain NHAM_RS04450 f462ba741e1ce8615cc35c40a72ed8a7 170 Pfam PF00571 CBS domain 39 85 2.4E-5 T 22-04-2016 IPR000644 CBS domain NHAM_RS04450 f462ba741e1ce8615cc35c40a72ed8a7 170 Pfam PF00571 CBS domain 98 152 1.3E-12 T 22-04-2016 IPR000644 CBS domain NHAM_RS04450 f462ba741e1ce8615cc35c40a72ed8a7 170 Gene3D G3DSA:3.10.580.10 31 153 7.4E-29 T 22-04-2016 NHAM_RS15545 4104972d128218088b6060b20e3b83e8 397 SUPERFAMILY SSF48208 231 289 2.45E-5 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NHAM_RS15545 4104972d128218088b6060b20e3b83e8 397 Gene3D G3DSA:1.50.10.10 223 284 9.6E-4 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NHAM_RS15545 4104972d128218088b6060b20e3b83e8 397 Gene3D G3DSA:1.50.10.10 48 113 9.6E-4 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 NHAM_RS09240 9128d10aac0eb062fb84b3173a555eed 90 Gene3D G3DSA:3.40.630.30 2 87 2.8E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS09240 9128d10aac0eb062fb84b3173a555eed 90 SUPERFAMILY SSF55729 2 87 3.72E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase NHAM_RS09240 9128d10aac0eb062fb84b3173a555eed 90 PANTHER PTHR31435 3 90 7.8E-25 T 22-04-2016 NHAM_RS09240 9128d10aac0eb062fb84b3173a555eed 90 Pfam PF14542 GCN5-related N-acetyl-transferase 12 87 7.6E-24 T 22-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase NHAM_RS11940 07690732426dbb21892420f1400db449 319 Pfam PF13624 SurA N-terminal domain 21 138 3.9E-9 T 22-04-2016 NHAM_RS11940 07690732426dbb21892420f1400db449 319 SUPERFAMILY SSF109998 32 201 2.35E-31 T 22-04-2016 IPR027304 Trigger factor/SurA domain NHAM_RS11940 07690732426dbb21892420f1400db449 319 Gene3D G3DSA:3.10.50.40 167 290 1.2E-4 T 22-04-2016 NHAM_RS05845 37dc9ee325377d22224b0f1be9211f9a 549 SUPERFAMILY SSF53041 14 168 5.1E-38 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS05845 37dc9ee325377d22224b0f1be9211f9a 549 PANTHER PTHR30461:SF3 13 381 1.2E-55 T 22-04-2016 NHAM_RS05845 37dc9ee325377d22224b0f1be9211f9a 549 Pfam PF07508 Recombinase 188 284 2.3E-12 T 22-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 NHAM_RS05845 37dc9ee325377d22224b0f1be9211f9a 549 Gene3D G3DSA:3.40.50.1390 14 149 7.0E-34 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS05845 37dc9ee325377d22224b0f1be9211f9a 549 PANTHER PTHR30461 13 381 1.2E-55 T 22-04-2016 NHAM_RS05845 37dc9ee325377d22224b0f1be9211f9a 549 Pfam PF00239 Resolvase, N terminal domain 16 166 4.2E-37 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS05845 37dc9ee325377d22224b0f1be9211f9a 549 SMART SM00857 15 168 2.2E-59 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 NHAM_RS04905 37257d3d3326e92819f469ee5dd0b035 790 Gene3D G3DSA:2.170.130.10 73 205 4.9E-6 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS04905 37257d3d3326e92819f469ee5dd0b035 790 Gene3D G3DSA:2.170.130.10 23 38 4.9E-6 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NHAM_RS04905 37257d3d3326e92819f469ee5dd0b035 790 PANTHER PTHR32552 502 557 2.5E-19 T 22-04-2016 NHAM_RS04905 37257d3d3326e92819f469ee5dd0b035 790 PANTHER PTHR32552 3 36 2.5E-19 T 22-04-2016 NHAM_RS04905 37257d3d3326e92819f469ee5dd0b035 790 PANTHER PTHR32552 573 790 2.5E-19 T 22-04-2016 NHAM_RS04905 37257d3d3326e92819f469ee5dd0b035 790 PANTHER PTHR32552 94 481 2.5E-19 T 22-04-2016 NHAM_RS04905 37257d3d3326e92819f469ee5dd0b035 790 SUPERFAMILY SSF56935 98 790 1.56E-77 T 22-04-2016 NHAM_RS04905 37257d3d3326e92819f469ee5dd0b035 790 Pfam PF00593 TonB dependent receptor 519 788 5.9E-27 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS04905 37257d3d3326e92819f469ee5dd0b035 790 Gene3D G3DSA:2.40.170.20 206 790 2.4E-69 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NHAM_RS00945 117b7bedda09e7ec2d82015762537699 193 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 9 189 2.3E-81 T 22-04-2016 IPR018715 Protein of unknown function DUF2239 NHAM_RS14175 ed92b8721d44c3b92fbe312d3fae018b 255 PANTHER PTHR22572 2 255 4.7E-168 T 22-04-2016 NHAM_RS14175 ed92b8721d44c3b92fbe312d3fae018b 255 Gene3D G3DSA:3.90.550.10 1 252 2.0E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS14175 ed92b8721d44c3b92fbe312d3fae018b 255 PANTHER PTHR22572:SF16 2 255 4.7E-168 T 22-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 NHAM_RS14175 ed92b8721d44c3b92fbe312d3fae018b 255 Pfam PF00483 Nucleotidyl transferase 2 199 1.5E-18 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NHAM_RS14175 ed92b8721d44c3b92fbe312d3fae018b 255 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 255 3.7E-141 T 22-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 NHAM_RS14175 ed92b8721d44c3b92fbe312d3fae018b 255 SUPERFAMILY SSF53448 1 254 4.73E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS05640 8ade30c481f79e14139d64ff025ba99b 160 Pfam PF06186 Protein of unknown function (DUF992) 21 157 2.6E-53 T 22-04-2016 IPR009333 Protein of unknown function DUF992 NHAM_RS08170 7d98ce083742769f8a5306ed61d4dcd3 122 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 7 77 4.2E-21 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS08170 7d98ce083742769f8a5306ed61d4dcd3 122 PANTHER PTHR30007:SF0 7 106 2.3E-20 T 22-04-2016 NHAM_RS08170 7d98ce083742769f8a5306ed61d4dcd3 122 PANTHER PTHR30007 7 106 2.3E-20 T 22-04-2016 NHAM_RS02515 bc918b2235a130c715d511e280efc75a 487 PANTHER PTHR36699 1 313 8.9E-67 T 22-04-2016 NHAM_RS02515 bc918b2235a130c715d511e280efc75a 487 SUPERFAMILY SSF141523 57 175 2.09E-8 T 22-04-2016 NHAM_RS04730 af36cb471270b212f86da1455ee7a904 154 Pfam PF05940 NnrS protein 3 149 1.9E-44 T 22-04-2016 IPR010266 NnrS NHAM_RS11725 42c2c70f4af8c2b71acbd383d2995eb5 345 PANTHER PTHR22594 1 337 2.6E-119 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS11725 42c2c70f4af8c2b71acbd383d2995eb5 345 SUPERFAMILY SSF55681 7 340 1.14E-66 T 22-04-2016 NHAM_RS11725 42c2c70f4af8c2b71acbd383d2995eb5 345 Pfam PF00152 tRNA synthetases class II (D, K and N) 11 338 1.9E-30 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 NHAM_RS11725 42c2c70f4af8c2b71acbd383d2995eb5 345 Gene3D G3DSA:3.30.930.10 12 340 5.0E-59 T 22-04-2016 NHAM_RS11725 42c2c70f4af8c2b71acbd383d2995eb5 345 PANTHER PTHR22594:SF7 1 337 2.6E-119 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 NHAM_RS11725 42c2c70f4af8c2b71acbd383d2995eb5 345 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 20 338 2.8E-110 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 NHAM_RS11725 42c2c70f4af8c2b71acbd383d2995eb5 345 PRINTS PR00982 Lysyl-tRNA synthetase signature 102 119 1.5E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 NHAM_RS11725 42c2c70f4af8c2b71acbd383d2995eb5 345 PRINTS PR00982 Lysyl-tRNA synthetase signature 35 45 1.5E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 NHAM_RS11725 42c2c70f4af8c2b71acbd383d2995eb5 345 PRINTS PR00982 Lysyl-tRNA synthetase signature 228 244 1.5E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 NHAM_RS11725 42c2c70f4af8c2b71acbd383d2995eb5 345 PRINTS PR00982 Lysyl-tRNA synthetase signature 84 97 1.5E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 NHAM_RS02125 5f4f8914b24638f6ebe71bd0ff0f1930 265 SUPERFAMILY SSF52833 41 264 3.56E-74 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS02125 5f4f8914b24638f6ebe71bd0ff0f1930 265 Gene3D G3DSA:3.40.30.10 48 133 4.2E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold NHAM_RS02125 5f4f8914b24638f6ebe71bd0ff0f1930 265 PANTHER PTHR36057:SF1 4 264 5.3E-77 T 22-04-2016 NHAM_RS02125 5f4f8914b24638f6ebe71bd0ff0f1930 265 Pfam PF06764 Protein of unknown function (DUF1223) 47 246 1.0E-67 T 22-04-2016 IPR010634 Protein of unknown function DUF1223 NHAM_RS02125 5f4f8914b24638f6ebe71bd0ff0f1930 265 PANTHER PTHR36057 4 264 5.3E-77 T 22-04-2016 NHAM_RS05690 e0e6abdde8440e556197664b921271ff 415 SUPERFAMILY SSF103473 30 408 1.02E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain NHAM_RS05690 e0e6abdde8440e556197664b921271ff 415 Pfam PF07690 Major Facilitator Superfamily 38 281 2.7E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NHAM_RS05690 e0e6abdde8440e556197664b921271ff 415 PANTHER PTHR23505:SF8 2 411 3.4E-135 T 22-04-2016 NHAM_RS05690 e0e6abdde8440e556197664b921271ff 415 PANTHER PTHR23505 2 411 3.4E-135 T 22-04-2016 NHAM_RS05690 e0e6abdde8440e556197664b921271ff 415 Gene3D G3DSA:1.20.1250.20 33 210 1.2E-17 T 22-04-2016 NHAM_RS05690 e0e6abdde8440e556197664b921271ff 415 Gene3D G3DSA:1.20.1250.20 234 406 2.8E-19 T 22-04-2016 NHAM_RS09085 f39625da05b941f487aff9827193a532 99 Gene3D G3DSA:1.10.260.40 15 89 6.1E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NHAM_RS16730 d602ab33e6881d372c63f8843ff0fc54 118 PIRSF PIRSF021239 5 117 8.3E-50 T 22-04-2016 IPR007437 Putative member of DMT superfamily NHAM_RS16730 d602ab33e6881d372c63f8843ff0fc54 118 Pfam PF04342 Putative member of DMT superfamily (DUF486) 12 114 1.7E-45 T 22-04-2016 IPR007437 Putative member of DMT superfamily NHAM_RS16730 d602ab33e6881d372c63f8843ff0fc54 118 PANTHER PTHR38482 3 118 1.2E-45 T 22-04-2016 NHAM_RS09220 5c978a780e1a43f40c194a2ee5892ce1 366 SUPERFAMILY SSF56112 22 161 3.32E-13 T 22-04-2016 IPR011009 Protein kinase-like domain NHAM_RS09220 5c978a780e1a43f40c194a2ee5892ce1 366 Gene3D G3DSA:1.10.510.10 111 160 1.6E-7 T 22-04-2016 NHAM_RS09220 5c978a780e1a43f40c194a2ee5892ce1 366 Gene3D G3DSA:3.30.300.30 244 317 3.5E-7 T 22-04-2016 NHAM_RS09220 5c978a780e1a43f40c194a2ee5892ce1 366 SUPERFAMILY SSF56801 243 324 4.58E-7 T 22-04-2016 NHAM_RS17140 f2db961a9fa41944ff8642d86a530a61 83 Pfam PF04226 Transglycosylase associated protein 37 82 1.2E-6 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 NHAM_RS18845 f533c8a805325016adb3170e009f1f09 103 Pfam PF08770 Sulphur oxidation protein SoxZ 7 99 5.6E-36 T 22-04-2016 IPR014880 Sulphur oxidation protein SoxZ NHAM_RS18845 f533c8a805325016adb3170e009f1f09 103 Gene3D G3DSA:2.60.40.10 4 102 1.4E-34 T 22-04-2016 IPR013783 Immunoglobulin-like fold NHAM_RS18845 f533c8a805325016adb3170e009f1f09 103 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 102 3.5E-36 T 22-04-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ NHAM_RS18845 f533c8a805325016adb3170e009f1f09 103 SUPERFAMILY SSF81296 1 102 2.94E-31 T 22-04-2016 IPR014756 Immunoglobulin E-set NHAM_RS16365 ac9ab4ef19d099407e14826e1b289ef9 259 Gene3D G3DSA:2.40.440.10 126 258 2.3E-35 T 22-04-2016 NHAM_RS16365 ac9ab4ef19d099407e14826e1b289ef9 259 SUPERFAMILY SSF141523 125 259 5.75E-33 T 22-04-2016 NHAM_RS16365 ac9ab4ef19d099407e14826e1b289ef9 259 PANTHER PTHR30582 97 259 1.2E-63 T 22-04-2016 NHAM_RS16365 ac9ab4ef19d099407e14826e1b289ef9 259 Pfam PF03734 L,D-transpeptidase catalytic domain 131 258 1.4E-16 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 NHAM_RS16365 ac9ab4ef19d099407e14826e1b289ef9 259 PANTHER PTHR30582:SF1 97 259 1.2E-63 T 22-04-2016 NHAM_RS15220 fecefe1f11021939f4d86855a7563752 480 Pfam PF04966 Carbohydrate-selective porin, OprB family 107 480 2.6E-69 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 NHAM_RS15220 fecefe1f11021939f4d86855a7563752 480 PANTHER PTHR37944:SF2 80 480 3.2E-138 T 22-04-2016 NHAM_RS15220 fecefe1f11021939f4d86855a7563752 480 PANTHER PTHR37944 80 480 3.2E-138 T 22-04-2016 NHAM_RS12190 3c5af64827019ba2959283024c4da346 203 Pfam PF02924 Bacteriophage lambda head decoration protein D 1 199 1.6E-21 T 22-04-2016 IPR004195 Head decoration protein D GO:0019028 NHAM_RS16030 75e3a2afc9d7af62f518ae2af58683f0 72 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 42 3.5E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NHAM_RS16030 75e3a2afc9d7af62f518ae2af58683f0 72 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 6 68 8.1E-17 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing NHAM_RS09230 475339c3b9857063ee6fc84731f9e670 307 Pfam PF09955 Predicted integral membrane protein (DUF2189) 78 203 1.7E-37 T 22-04-2016 IPR018692 Predicted integral membrane protein DUF2189 NHAM_RS08390 6614077965225bd2989e2a6a8cc457ee 88 Pfam PF13670 Peptidase propeptide and YPEB domain 6 84 2.5E-24 T 22-04-2016 IPR025711 PepSY domain NHAM_RS18515 8b29fcd34fc72f71f82acaf14dff2de7 295 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 103 208 7.1E-11 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NHAM_RS18515 8b29fcd34fc72f71f82acaf14dff2de7 295 Gene3D G3DSA:2.40.50.100 66 130 5.3E-5 T 22-04-2016 NHAM_RS18515 8b29fcd34fc72f71f82acaf14dff2de7 295 PANTHER PTHR30097 105 294 1.1E-35 T 22-04-2016 NHAM_RS12455 fb2cde5ec6a96cb41d602dbc56be379a 246 PANTHER PTHR12318:SF0 1 191 5.3E-36 T 22-04-2016 NHAM_RS12455 fb2cde5ec6a96cb41d602dbc56be379a 246 SUPERFAMILY SSF55811 11 66 5.69E-17 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS12455 fb2cde5ec6a96cb41d602dbc56be379a 246 SUPERFAMILY SSF55811 139 215 5.69E-17 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS12455 fb2cde5ec6a96cb41d602dbc56be379a 246 SUPERFAMILY SSF55811 97 111 5.69E-17 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS12455 fb2cde5ec6a96cb41d602dbc56be379a 246 PANTHER PTHR12318 1 191 5.3E-36 T 22-04-2016 NHAM_RS12455 fb2cde5ec6a96cb41d602dbc56be379a 246 Gene3D G3DSA:3.90.79.10 8 216 2.3E-21 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS14380 63a55c7a7fdbf906dccbb8115e17b928 145 PRINTS PR00332 Histidine triad family signature 101 111 3.92E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein NHAM_RS14380 63a55c7a7fdbf906dccbb8115e17b928 145 PRINTS PR00332 Histidine triad family signature 34 52 3.92E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein NHAM_RS14380 63a55c7a7fdbf906dccbb8115e17b928 145 PRINTS PR00332 Histidine triad family signature 13 29 3.92E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein NHAM_RS14380 63a55c7a7fdbf906dccbb8115e17b928 145 PANTHER PTHR23089 8 112 2.4E-33 T 22-04-2016 IPR001310 Histidine triad (HIT) protein NHAM_RS14380 63a55c7a7fdbf906dccbb8115e17b928 145 SUPERFAMILY SSF54197 5 140 5.72E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 NHAM_RS14380 63a55c7a7fdbf906dccbb8115e17b928 145 Gene3D G3DSA:3.30.428.10 11 124 3.2E-34 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 NHAM_RS14380 63a55c7a7fdbf906dccbb8115e17b928 145 Pfam PF01230 HIT domain 19 114 1.0E-22 T 22-04-2016 IPR001310 Histidine triad (HIT) protein NHAM_RS14380 63a55c7a7fdbf906dccbb8115e17b928 145 PANTHER PTHR23089:SF7 8 112 2.4E-33 T 22-04-2016 NHAM_RS17355 ffb66511471b8c1e783aa056bcbd023d 419 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 74 351 1.0E-4 T 22-04-2016 NHAM_RS14315 e1c27b8b22597f1a90b1cf0961cbe7e5 276 PANTHER PTHR33055 45 212 2.7E-40 T 22-04-2016 NHAM_RS14315 e1c27b8b22597f1a90b1cf0961cbe7e5 276 Pfam PF02371 Transposase IS116/IS110/IS902 family 77 161 3.4E-23 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS14315 e1c27b8b22597f1a90b1cf0961cbe7e5 276 PANTHER PTHR33055:SF3 45 212 2.7E-40 T 22-04-2016 NHAM_RS06160 3bd50d3cf34b2df9821480e81f0a5bb1 446 Gene3D G3DSA:3.40.190.10 46 162 8.3E-4 T 22-04-2016 NHAM_RS06160 3bd50d3cf34b2df9821480e81f0a5bb1 446 Gene3D G3DSA:3.40.190.10 163 332 2.6E-16 T 22-04-2016 NHAM_RS06160 3bd50d3cf34b2df9821480e81f0a5bb1 446 SUPERFAMILY SSF53850 38 438 1.09E-28 T 22-04-2016 NHAM_RS14110 8b698406d0d7fdded1624570b68ec1eb 450 SUPERFAMILY SSF53335 260 355 5.33E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS14110 8b698406d0d7fdded1624570b68ec1eb 450 SUPERFAMILY SSF53335 118 170 5.33E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS14110 8b698406d0d7fdded1624570b68ec1eb 450 Gene3D G3DSA:3.40.50.150 99 174 8.8E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS14110 8b698406d0d7fdded1624570b68ec1eb 450 Gene3D G3DSA:3.40.50.150 272 324 8.8E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS14110 8b698406d0d7fdded1624570b68ec1eb 450 Gene3D G3DSA:3.40.50.150 225 226 8.8E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS20465 5d04ffaddee3578ff5aae3161539dd6e 343 PANTHER PTHR33055:SF3 1 340 3.1E-50 T 22-04-2016 NHAM_RS20465 5d04ffaddee3578ff5aae3161539dd6e 343 Pfam PF01548 Transposase 5 151 6.8E-15 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS20465 5d04ffaddee3578ff5aae3161539dd6e 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 290 5.9E-19 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS20465 5d04ffaddee3578ff5aae3161539dd6e 343 PANTHER PTHR33055 1 340 3.1E-50 T 22-04-2016 NHAM_RS00295 7dbd99d225b6d04a3c0c1fcc9d286a2a 442 TIGRFAM TIGR01499 folC: bifunctional protein FolC 30 434 5.4E-107 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 NHAM_RS00295 7dbd99d225b6d04a3c0c1fcc9d286a2a 442 SUPERFAMILY SSF53623 11 292 1.72E-87 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS00295 7dbd99d225b6d04a3c0c1fcc9d286a2a 442 PANTHER PTHR11136 5 435 1.2E-115 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 NHAM_RS00295 7dbd99d225b6d04a3c0c1fcc9d286a2a 442 Pfam PF08245 Mur ligase middle domain 53 269 1.9E-9 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS00295 7dbd99d225b6d04a3c0c1fcc9d286a2a 442 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 NHAM_RS00295 7dbd99d225b6d04a3c0c1fcc9d286a2a 442 Gene3D G3DSA:3.90.190.20 295 439 2.2E-25 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS00295 7dbd99d225b6d04a3c0c1fcc9d286a2a 442 SUPERFAMILY SSF53244 292 436 6.1E-23 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 NHAM_RS00295 7dbd99d225b6d04a3c0c1fcc9d286a2a 442 PIRSF PIRSF001563 4 441 7.4E-108 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 NHAM_RS00295 7dbd99d225b6d04a3c0c1fcc9d286a2a 442 Gene3D G3DSA:3.40.1190.10 11 293 1.4E-91 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 NHAM_RS04065 dd121e107edc4b48e2157299307ba59c 663 Gene3D G3DSA:3.40.50.300 92 160 1.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04065 dd121e107edc4b48e2157299307ba59c 663 Gene3D G3DSA:3.40.50.300 551 639 1.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04065 dd121e107edc4b48e2157299307ba59c 663 Gene3D G3DSA:3.40.50.300 220 314 1.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04065 dd121e107edc4b48e2157299307ba59c 663 Gene3D G3DSA:3.40.50.300 432 441 1.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04065 dd121e107edc4b48e2157299307ba59c 663 SUPERFAMILY SSF52540 514 607 3.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04065 dd121e107edc4b48e2157299307ba59c 663 SUPERFAMILY SSF52540 202 326 3.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04065 dd121e107edc4b48e2157299307ba59c 663 SUPERFAMILY SSF52540 92 142 3.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS00040 c71f791f6d5775f1fe33119dcb6941a1 94 SUPERFAMILY SSF54909 1 94 1.88E-29 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel NHAM_RS00040 c71f791f6d5775f1fe33119dcb6941a1 94 Pfam PF07045 Domain of unknown function (DUF1330) 3 94 3.8E-32 T 22-04-2016 IPR010753 Domain of unknown function DUF1330 NHAM_RS00040 c71f791f6d5775f1fe33119dcb6941a1 94 PANTHER PTHR41521 1 94 7.7E-18 T 22-04-2016 NHAM_RS00040 c71f791f6d5775f1fe33119dcb6941a1 94 Gene3D G3DSA:3.30.70.900 1 94 4.4E-33 T 22-04-2016 NHAM_RS14635 3269aa790b22bc9047f44d42c62b642a 102 Gene3D G3DSA:3.30.420.10 2 97 2.7E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS14635 3269aa790b22bc9047f44d42c62b642a 102 PANTHER PTHR10642 1 102 3.7E-23 T 22-04-2016 NHAM_RS14635 3269aa790b22bc9047f44d42c62b642a 102 Pfam PF00075 RNase H 3 93 1.8E-22 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 NHAM_RS14635 3269aa790b22bc9047f44d42c62b642a 102 SUPERFAMILY SSF53098 1 97 3.79E-28 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS14085 27be2e6558e96b0fea7238468607da9b 239 Pfam PF05988 Bacterial protein of unknown function (DUF899) 8 236 9.9E-51 T 22-04-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like NHAM_RS03360 bf9769260d4bcf229db58ae8d9e1d467 84 Pfam PF13670 Peptidase propeptide and YPEB domain 7 81 1.8E-10 T 22-04-2016 IPR025711 PepSY domain NHAM_RS17510 4289af5dde5f5941612d361ce7c432d0 566 Pfam PF10082 Putative beta-barrel porin 2 173 566 8.7E-149 T 22-04-2016 IPR018759 Putative beta-barrel porin 2 NHAM_RS04655 4b875b049fbe2c878a70859e535cc6ff 95 Pfam PF13586 Transposase DDE domain 36 87 1.2E-11 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS04655 4b875b049fbe2c878a70859e535cc6ff 95 PANTHER PTHR30007:SF0 9 91 4.1E-23 T 22-04-2016 NHAM_RS04655 4b875b049fbe2c878a70859e535cc6ff 95 PANTHER PTHR30007 9 91 4.1E-23 T 22-04-2016 NHAM_RS20605 f854a0d02e0005bab730b4c721d746f1 256 PANTHER PTHR11922:SF18 162 255 9.4E-43 T 22-04-2016 NHAM_RS20605 f854a0d02e0005bab730b4c721d746f1 256 PANTHER PTHR11922:SF18 34 69 9.4E-43 T 22-04-2016 NHAM_RS20605 f854a0d02e0005bab730b4c721d746f1 256 PANTHER PTHR11922:SF18 85 144 9.4E-43 T 22-04-2016 NHAM_RS20605 f854a0d02e0005bab730b4c721d746f1 256 PANTHER PTHR11922 162 255 9.4E-43 T 22-04-2016 NHAM_RS20605 f854a0d02e0005bab730b4c721d746f1 256 PANTHER PTHR11922 34 69 9.4E-43 T 22-04-2016 NHAM_RS20605 f854a0d02e0005bab730b4c721d746f1 256 PANTHER PTHR11922 85 144 9.4E-43 T 22-04-2016 NHAM_RS20605 f854a0d02e0005bab730b4c721d746f1 256 SUPERFAMILY SSF52317 26 252 9.74E-32 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS20605 f854a0d02e0005bab730b4c721d746f1 256 Pfam PF07722 Peptidase C26 4 229 5.8E-62 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 NHAM_RS20605 f854a0d02e0005bab730b4c721d746f1 256 Gene3D G3DSA:3.40.50.880 1 248 3.7E-35 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS16310 81e432dad4749628dbedf797b6ceb389 271 Pfam PF00459 Inositol monophosphatase family 19 266 1.5E-43 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS16310 81e432dad4749628dbedf797b6ceb389 271 SUPERFAMILY SSF56655 15 266 1.24E-67 T 22-04-2016 NHAM_RS16310 81e432dad4749628dbedf797b6ceb389 271 PANTHER PTHR20854 7 266 1.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS16310 81e432dad4749628dbedf797b6ceb389 271 Gene3D G3DSA:3.40.190.80 186 266 1.3E-21 T 22-04-2016 NHAM_RS16310 81e432dad4749628dbedf797b6ceb389 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 5.3E-19 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS16310 81e432dad4749628dbedf797b6ceb389 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 141 164 5.3E-19 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS16310 81e432dad4749628dbedf797b6ceb389 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 92 108 5.3E-19 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS16310 81e432dad4749628dbedf797b6ceb389 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 5.3E-19 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS16310 81e432dad4749628dbedf797b6ceb389 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 5.3E-19 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS16310 81e432dad4749628dbedf797b6ceb389 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 5.3E-19 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 NHAM_RS16310 81e432dad4749628dbedf797b6ceb389 271 Gene3D G3DSA:3.30.540.10 14 158 1.8E-41 T 22-04-2016 NHAM_RS16310 81e432dad4749628dbedf797b6ceb389 271 PANTHER PTHR20854:SF38 7 266 1.1E-59 T 22-04-2016 NHAM_RS11540 0de1c6479e8b29a10f1069cdfa9f1b56 506 Pfam PF02530 Porin subfamily 25 498 6.5E-119 T 22-04-2016 IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 NHAM_RS17025 d3acc19526b6e4c21618ad8595ce4d8f 361 SUPERFAMILY SSF69279 5 176 4.68E-24 T 22-04-2016 NHAM_RS17025 d3acc19526b6e4c21618ad8595ce4d8f 361 Pfam PF05954 Phage late control gene D protein (GPD) 85 316 2.7E-14 T 22-04-2016 NHAM_RS02455 463a4c3d44c386c0c4bea63f6cafdd90 257 PANTHER PTHR10108:SF902 17 253 7.1E-81 T 22-04-2016 NHAM_RS02455 463a4c3d44c386c0c4bea63f6cafdd90 257 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 23 250 2.9E-91 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 NHAM_RS02455 463a4c3d44c386c0c4bea63f6cafdd90 257 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 21 256 39.383 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 NHAM_RS02455 463a4c3d44c386c0c4bea63f6cafdd90 257 SUPERFAMILY SSF53335 26 253 1.66E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS02455 463a4c3d44c386c0c4bea63f6cafdd90 257 Gene3D G3DSA:3.40.50.150 34 242 1.0E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS02455 463a4c3d44c386c0c4bea63f6cafdd90 257 Pfam PF08241 Methyltransferase domain 79 172 2.5E-21 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NHAM_RS02455 463a4c3d44c386c0c4bea63f6cafdd90 257 PANTHER PTHR10108 17 253 7.1E-81 T 22-04-2016 NHAM_RS06060 11043d4100568a878a1aca77c4cf264f 122 Pfam PF13586 Transposase DDE domain 37 122 1.3E-17 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS06060 11043d4100568a878a1aca77c4cf264f 122 PANTHER PTHR30007 1 122 1.1E-31 T 22-04-2016 NHAM_RS06060 11043d4100568a878a1aca77c4cf264f 122 PANTHER PTHR30007:SF22 1 122 1.1E-31 T 22-04-2016 NHAM_RS16675 11043d4100568a878a1aca77c4cf264f 122 Pfam PF13586 Transposase DDE domain 37 122 1.3E-17 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS16675 11043d4100568a878a1aca77c4cf264f 122 PANTHER PTHR30007 1 122 1.1E-31 T 22-04-2016 NHAM_RS16675 11043d4100568a878a1aca77c4cf264f 122 PANTHER PTHR30007:SF22 1 122 1.1E-31 T 22-04-2016 NHAM_RS04075 ff0f2fd3cd58b26408696f60e4c8e219 113 Gene3D G3DSA:3.40.50.300 64 109 1.5E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS04075 ff0f2fd3cd58b26408696f60e4c8e219 113 SUPERFAMILY SSF52540 59 108 1.59E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15130 57539251df19f543684a1cad51b23b88 151 SUPERFAMILY SSF51735 4 54 7.17E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS23315 3a0b7cbaf5f7e537323f13e6e545d9a4 137 PANTHER PTHR22648 1 137 3.1E-34 T 22-04-2016 NHAM_RS23315 3a0b7cbaf5f7e537323f13e6e545d9a4 137 SUPERFAMILY SSF54814 1 62 2.22E-14 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 NHAM_RS23315 3a0b7cbaf5f7e537323f13e6e545d9a4 137 SUPERFAMILY SSF47794 74 134 6.91E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 NHAM_RS23315 3a0b7cbaf5f7e537323f13e6e545d9a4 137 SMART SM00322 19 87 3.8E-4 T 22-04-2016 IPR004087 K Homology domain GO:0003676 NHAM_RS23315 3a0b7cbaf5f7e537323f13e6e545d9a4 137 Pfam PF07650 KH domain 7 60 9.6E-5 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 NHAM_RS23315 3a0b7cbaf5f7e537323f13e6e545d9a4 137 Gene3D G3DSA:3.30.300.20 1 66 1.8E-29 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta NHAM_RS23315 3a0b7cbaf5f7e537323f13e6e545d9a4 137 PANTHER PTHR22648:SF0 1 137 3.1E-34 T 22-04-2016 NHAM_RS23315 3a0b7cbaf5f7e537323f13e6e545d9a4 137 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 85 134 4.4E-17 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication NHAM_RS23315 3a0b7cbaf5f7e537323f13e6e545d9a4 137 Gene3D G3DSA:1.10.150.20 75 135 7.9E-19 T 22-04-2016 NHAM_RS08710 9311b33dcc805049b48f06183c9886cb 285 Pfam PF06230 Protein of unknown function (DUF1009) 64 281 3.1E-66 T 22-04-2016 IPR010415 Protein of unknown function DUF1009 NHAM_RS08710 9311b33dcc805049b48f06183c9886cb 285 PANTHER PTHR39962:SF1 1 285 4.4E-86 T 22-04-2016 NHAM_RS08710 9311b33dcc805049b48f06183c9886cb 285 PANTHER PTHR39962 1 285 4.4E-86 T 22-04-2016 NHAM_RS08210 ec78aaf531da11d5bf3aff66804b1f85 212 Pfam PF12762 ISXO2-like transposase domain 137 184 7.0E-7 T 22-04-2016 IPR024445 ISXO2-like transposase domain NHAM_RS08210 ec78aaf531da11d5bf3aff66804b1f85 212 Pfam PF12760 Transposase zinc-ribbon domain 16 62 2.0E-12 T 22-04-2016 IPR024442 Transposase, zinc-ribbon NHAM_RS16830 4c4cf50f29fe96506790e497d4a2a31c 216 Gene3D G3DSA:1.25.40.10 82 170 1.7E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS16830 4c4cf50f29fe96506790e497d4a2a31c 216 SUPERFAMILY SSF48452 77 170 1.33E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS10250 9e3771b927f516b7e12e50f9d51a1e90 82 SUPERFAMILY SSF141371 1 80 3.73E-16 T 22-04-2016 NHAM_RS10250 9e3771b927f516b7e12e50f9d51a1e90 82 Gene3D G3DSA:2.40.10.220 1 80 2.8E-9 T 22-04-2016 NHAM_RS10250 9e3771b927f516b7e12e50f9d51a1e90 82 Pfam PF07238 PilZ domain 3 80 7.1E-12 T 22-04-2016 IPR009875 PilZ domain GO:0035438 NHAM_RS04625 8bd9f41d15652697fe858a1fd6a1aeb4 97 Pfam PF11523 Protein of unknown function (DUF3223) 24 95 1.8E-23 T 22-04-2016 IPR021602 Protein of unknown function DUF3223 NHAM_RS04625 8bd9f41d15652697fe858a1fd6a1aeb4 97 Gene3D G3DSA:3.10.450.40 2 97 2.3E-32 T 22-04-2016 NHAM_RS04625 8bd9f41d15652697fe858a1fd6a1aeb4 97 PANTHER PTHR33415:SF1 4 97 1.1E-32 T 22-04-2016 NHAM_RS04625 8bd9f41d15652697fe858a1fd6a1aeb4 97 PANTHER PTHR33415 4 97 1.1E-32 T 22-04-2016 NHAM_RS02365 0c15dc40db225d59eedcc809af401350 236 Pfam PF02308 MgtC family 16 147 1.3E-25 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NHAM_RS02365 0c15dc40db225d59eedcc809af401350 236 PRINTS PR01837 MgtC/SapB protein signature 101 125 5.5E-28 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NHAM_RS02365 0c15dc40db225d59eedcc809af401350 236 PRINTS PR01837 MgtC/SapB protein signature 74 96 5.5E-28 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NHAM_RS02365 0c15dc40db225d59eedcc809af401350 236 PRINTS PR01837 MgtC/SapB protein signature 38 56 5.5E-28 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NHAM_RS02365 0c15dc40db225d59eedcc809af401350 236 PRINTS PR01837 MgtC/SapB protein signature 19 38 5.5E-28 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NHAM_RS02365 0c15dc40db225d59eedcc809af401350 236 PANTHER PTHR33778 1 209 1.9E-33 T 22-04-2016 NHAM_RS16820 b24106b99c09db764711d6a9be164c36 225 SUPERFAMILY SSF46626 27 103 6.52E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS16820 b24106b99c09db764711d6a9be164c36 225 SUPERFAMILY SSF46626 143 222 1.95E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS16820 b24106b99c09db764711d6a9be164c36 225 Gene3D G3DSA:1.10.760.10 152 220 1.4E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS16820 b24106b99c09db764711d6a9be164c36 225 Gene3D G3DSA:1.10.760.10 28 123 3.2E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS16820 b24106b99c09db764711d6a9be164c36 225 Pfam PF00034 Cytochrome c 144 220 2.7E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS13535 6f3b9a4ffed511f803ebb1bf3008d508 118 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 25 2.0E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NHAM_RS04060 dc6b2758e82bb5cb6901de8c84471933 629 SUPERFAMILY SSF48371 351 388 6.76E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 NHAM_RS04060 dc6b2758e82bb5cb6901de8c84471933 629 SUPERFAMILY SSF48371 57 177 6.76E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 NHAM_RS04060 dc6b2758e82bb5cb6901de8c84471933 629 SUPERFAMILY SSF48371 430 471 6.76E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 NHAM_RS13050 91596954b89d0aa5efddb6b56a6b6cdb 166 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 27 155 2.6E-45 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 NHAM_RS13050 91596954b89d0aa5efddb6b56a6b6cdb 166 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 13 157 30.452 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 NHAM_RS13050 91596954b89d0aa5efddb6b56a6b6cdb 166 PANTHER PTHR35146 10 162 6.3E-49 T 22-04-2016 NHAM_RS13050 91596954b89d0aa5efddb6b56a6b6cdb 166 PANTHER PTHR35146:SF1 10 162 6.3E-49 T 22-04-2016 NHAM_RS20230 ec3dad698aa1beada89499e083784bd6 177 SUPERFAMILY SSF140990 4 172 2.62E-17 T 22-04-2016 NHAM_RS19970 ec3dad698aa1beada89499e083784bd6 177 SUPERFAMILY SSF140990 4 172 2.62E-17 T 22-04-2016 NHAM_RS04690 d6d110572d862f3d75889fc9b7c0dcec 197 Gene3D G3DSA:3.40.1050.10 7 188 9.2E-36 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS04690 d6d110572d862f3d75889fc9b7c0dcec 197 SMART SM00947 29 187 2.9E-31 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS04690 d6d110572d862f3d75889fc9b7c0dcec 197 PANTHER PTHR11002 6 186 2.2E-48 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS04690 d6d110572d862f3d75889fc9b7c0dcec 197 SUPERFAMILY SSF53056 8 186 1.83E-40 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS04690 d6d110572d862f3d75889fc9b7c0dcec 197 PANTHER PTHR11002:SF4 6 186 2.2E-48 T 22-04-2016 NHAM_RS04690 d6d110572d862f3d75889fc9b7c0dcec 197 Pfam PF00484 Carbonic anhydrase 37 183 8.3E-11 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NHAM_RS18005 3c42a5ace2047b84bb86502757008f67 322 SUPERFAMILY SSF48452 199 304 2.15E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS18005 3c42a5ace2047b84bb86502757008f67 322 Gene3D G3DSA:1.25.40.10 196 304 2.7E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS18005 3c42a5ace2047b84bb86502757008f67 322 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 198 312 2.4E-36 T 22-04-2016 IPR014162 Tol-Pal system, YbgF NHAM_RS18005 3c42a5ace2047b84bb86502757008f67 322 Pfam PF13174 Tetratricopeptide repeat 273 304 4.4E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 NHAM_RS18005 3c42a5ace2047b84bb86502757008f67 322 Pfam PF13432 Tetratricopeptide repeat 203 258 2.0E-8 T 22-04-2016 NHAM_RS17240 5d0cfff42270958c53dc88afc07996ea 223 Pfam PF03374 Phage antirepressor protein KilAC domain 115 208 4.6E-14 T 22-04-2016 IPR005039 Antirepressor protein, C-terminal GO:0003677 NHAM_RS17240 5d0cfff42270958c53dc88afc07996ea 223 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 1 83 1.1E-18 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family NHAM_RS07260 2f645b6b5e72da727b8221d8805c23dd 70 Pfam PF09550 Phage tail assembly chaperone protein, TAC 4 61 1.3E-25 T 22-04-2016 IPR019056 Phage tail assembly chaperone protein, TAC6 NHAM_RS07260 2f645b6b5e72da727b8221d8805c23dd 70 TIGRFAM TIGR02216 phage_TIGR02216: phage conserved hypothetical protein 3 61 6.1E-23 T 22-04-2016 IPR011739 Gene transfer agent, rcc01693 NHAM_RS17325 476e4365e65026ce1ff5c8972872473a 156 PANTHER PTHR22617 9 148 2.3E-22 T 22-04-2016 NHAM_RS17325 476e4365e65026ce1ff5c8972872473a 156 Pfam PF01584 CheW-like domain 14 148 5.1E-27 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NHAM_RS17325 476e4365e65026ce1ff5c8972872473a 156 Gene3D G3DSA:2.40.50.180 52 97 3.0E-4 T 22-04-2016 NHAM_RS17325 476e4365e65026ce1ff5c8972872473a 156 SMART SM00260 10 147 6.7E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NHAM_RS17325 476e4365e65026ce1ff5c8972872473a 156 SUPERFAMILY SSF50341 8 148 4.19E-29 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NHAM_RS16470 1b1d22b37cb88a0903af25da3e88f1f6 82 SUPERFAMILY SSF54913 1 73 1.47E-23 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta NHAM_RS16470 1b1d22b37cb88a0903af25da3e88f1f6 82 Pfam PF09413 Putative prokaryotic signal transducing protein 2 65 3.5E-18 T 22-04-2016 IPR018551 Domain of unknown function DUF2007 NHAM_RS16470 1b1d22b37cb88a0903af25da3e88f1f6 82 Gene3D G3DSA:3.30.70.790 1 74 1.5E-33 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 NHAM_RS07180 6e490c4e6a0fc32a531a3af5d737af61 54 Pfam PF04964 Flp/Fap pilin component 8 51 8.0E-18 T 22-04-2016 IPR007047 Flp/Fap pilin component NHAM_RS12535 f44f8d85b43158e22bcb601ca42544a8 142 Gene3D G3DSA:3.10.129.10 9 141 7.8E-42 T 22-04-2016 IPR029069 HotDog domain NHAM_RS12535 f44f8d85b43158e22bcb601ca42544a8 142 Pfam PF03061 Thioesterase superfamily 52 124 7.0E-15 T 22-04-2016 IPR006683 Thioesterase domain NHAM_RS12535 f44f8d85b43158e22bcb601ca42544a8 142 PANTHER PTHR12418:SF30 1 141 7.8E-55 T 22-04-2016 NHAM_RS12535 f44f8d85b43158e22bcb601ca42544a8 142 SUPERFAMILY SSF54637 6 139 6.61E-26 T 22-04-2016 IPR029069 HotDog domain NHAM_RS12535 f44f8d85b43158e22bcb601ca42544a8 142 PANTHER PTHR12418 1 141 7.8E-55 T 22-04-2016 NHAM_RS12535 f44f8d85b43158e22bcb601ca42544a8 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 27 120 2.5E-11 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain NHAM_RS16505 a1105198ea6fea1734c3b3e177d1decb 242 Pfam PF01351 Ribonuclease HII 35 209 1.0E-37 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain NHAM_RS16505 a1105198ea6fea1734c3b3e177d1decb 242 PANTHER PTHR10954 22 220 6.1E-63 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 NHAM_RS16505 a1105198ea6fea1734c3b3e177d1decb 242 Hamap MF_00052_B Ribonuclease HII [rnhB]. 33 211 34.966 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 NHAM_RS16505 a1105198ea6fea1734c3b3e177d1decb 242 Gene3D G3DSA:3.30.420.10 34 172 3.7E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS16505 a1105198ea6fea1734c3b3e177d1decb 242 SUPERFAMILY SSF53098 23 216 3.64E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS05060 adc187934d232372237688736dd127c5 159 Gene3D G3DSA:1.10.760.10 63 157 8.1E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS05060 adc187934d232372237688736dd127c5 159 PIRSF PIRSF000008 4 159 8.8E-30 T 22-04-2016 IPR009153 Cytochrome cL GO:0005506|GO:0009055|GO:0020037|GO:0042597 NHAM_RS05060 adc187934d232372237688736dd127c5 159 SUPERFAMILY SSF46626 14 157 9.05E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS05060 adc187934d232372237688736dd127c5 159 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 78 154 6.7E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS07100 48a247c9183704e62a8c87266be14fc1 312 Pfam PF04347 Flagellar biosynthesis protein, FliO 22 118 6.1E-9 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 NHAM_RS14335 28dec0da6c8a1aa42065e45d40bec090 633 Pfam PF02719 Polysaccharide biosynthesis protein 295 588 8.2E-106 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain NHAM_RS14335 28dec0da6c8a1aa42065e45d40bec090 633 Gene3D G3DSA:3.40.50.720 294 480 3.4E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14335 28dec0da6c8a1aa42065e45d40bec090 633 PANTHER PTHR10366:SF256 294 570 1.0E-104 T 22-04-2016 NHAM_RS14335 28dec0da6c8a1aa42065e45d40bec090 633 Gene3D G3DSA:3.90.25.10 481 564 4.5E-9 T 22-04-2016 NHAM_RS14335 28dec0da6c8a1aa42065e45d40bec090 633 SUPERFAMILY SSF51735 293 566 1.65E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS14335 28dec0da6c8a1aa42065e45d40bec090 633 PANTHER PTHR10366 294 570 1.0E-104 T 22-04-2016 NHAM_RS04985 b3cbb81324091318fc5b477be160e1f9 512 PANTHER PTHR30029 6 503 3.7E-181 T 22-04-2016 NHAM_RS04985 b3cbb81324091318fc5b477be160e1f9 512 Pfam PF04293 SpoVR like protein 16 455 1.5E-157 T 22-04-2016 IPR007390 Sporulation stage V, protein R NHAM_RS04985 b3cbb81324091318fc5b477be160e1f9 512 PANTHER PTHR30029:SF2 6 503 3.7E-181 T 22-04-2016 NHAM_RS02470 607889172477f335e87295b0427473bb 147 PIRSF PIRSF032131 1 147 6.3E-61 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 NHAM_RS02470 607889172477f335e87295b0427473bb 147 Pfam PF06676 Protein of unknown function (DUF1178) 1 143 1.8E-54 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 NHAM_RS03790 fa65d5ddf8ca20c09f62984946e8fd73 159 PANTHER PTHR30487:SF0 2 154 5.0E-22 T 22-04-2016 NHAM_RS03790 fa65d5ddf8ca20c09f62984946e8fd73 159 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 101 116 6.9E-7 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NHAM_RS03790 fa65d5ddf8ca20c09f62984946e8fd73 159 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 20 37 6.9E-7 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NHAM_RS03790 fa65d5ddf8ca20c09f62984946e8fd73 159 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 89 100 6.9E-7 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- NHAM_RS03790 fa65d5ddf8ca20c09f62984946e8fd73 159 PANTHER PTHR30487 2 154 5.0E-22 T 22-04-2016 NHAM_RS03790 fa65d5ddf8ca20c09f62984946e8fd73 159 Pfam PF01478 Type IV leader peptidase family 12 118 1.4E-13 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 NHAM_RS07565 ea751acd3ac07a04c47601c1b1597629 169 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 95 151 2.0E-21 T 22-04-2016 IPR018637 Domain of unknown function DUF2059 NHAM_RS04325 d48b88cc47556568d974dc7603eee3b7 125 SUPERFAMILY SSF48295 14 79 1.05E-12 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS04325 d48b88cc47556568d974dc7603eee3b7 125 Pfam PF01527 Transposase 22 114 5.2E-10 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NHAM_RS04325 d48b88cc47556568d974dc7603eee3b7 125 PANTHER PTHR33609 23 113 8.2E-24 T 22-04-2016 NHAM_RS04325 d48b88cc47556568d974dc7603eee3b7 125 Gene3D G3DSA:1.10.10.10 16 76 7.5E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS04325 d48b88cc47556568d974dc7603eee3b7 125 PANTHER PTHR33609:SF1 23 113 8.2E-24 T 22-04-2016 NHAM_RS14595 9b54a0a3d7523ac57b05318af7cce704 140 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 28 0.0012 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NHAM_RS06320 99b79beaa5c7183ec6c0e9e660754e5e 61 Pfam PF04325 Protein of unknown function (DUF465) 7 53 3.2E-12 T 22-04-2016 IPR007420 Protein of unknown function DUF465 NHAM_RS11090 ee3ff877c5d1b32fcc8a574df2d71654 116 Pfam PF16518 T3SS negative regulator,GrlR 1 92 1.3E-10 T 22-04-2016 IPR032417 T3SS negative regulator GrlR NHAM_RS15905 59428a1ab3a08c17b454a331aa798785 97 Pfam PF14110 Domain of unknown function (DUF4282) 8 91 3.8E-23 T 22-04-2016 IPR025557 Protein of unknown function DUF4282 NHAM_RS07070 541ce325f708bd99c1582f602c61f1c7 164 PANTHER PTHR35091 6 164 2.9E-33 T 22-04-2016 NHAM_RS07070 541ce325f708bd99c1582f602c61f1c7 164 Pfam PF03748 Flagellar basal body-associated protein FliL 66 164 4.9E-19 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 NHAM_RS12140 e4a0924f79b9e09be75dd6be51fc21ec 178 Pfam PF14301 Domain of unknown function (DUF4376) 75 174 2.1E-17 T 22-04-2016 IPR025484 Domain of unknown function DUF4376 NHAM_RS02475 0ab48335d0e5418e24cfd6b420b5bb24 80 Pfam PF06676 Protein of unknown function (DUF1178) 1 66 3.9E-26 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 NHAM_RS02165 37389f3842fe6744c984f4a27e3f070c 78 Pfam PF12071 Protein of unknown function (DUF3551) 1 76 1.3E-31 T 22-04-2016 IPR021937 Protein of unknown function DUF3551 NHAM_RS15755 662a4fbd4170fb9eef1d18d47f38b5d2 180 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 83 7.4E-24 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS15755 662a4fbd4170fb9eef1d18d47f38b5d2 180 PANTHER PTHR30007 16 156 1.8E-48 T 22-04-2016 NHAM_RS15755 662a4fbd4170fb9eef1d18d47f38b5d2 180 PANTHER PTHR30007:SF0 16 156 1.8E-48 T 22-04-2016 NHAM_RS15755 662a4fbd4170fb9eef1d18d47f38b5d2 180 Pfam PF01609 Transposase DDE domain 105 155 3.5E-5 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS20260 bafaa19620417c10ba3cbaf997b48e1e 342 Pfam PF02371 Transposase IS116/IS110/IS902 family 213 289 3.3E-22 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS20260 bafaa19620417c10ba3cbaf997b48e1e 342 PANTHER PTHR33055:SF2 3 340 1.2E-126 T 22-04-2016 NHAM_RS20260 bafaa19620417c10ba3cbaf997b48e1e 342 Pfam PF01548 Transposase 7 147 1.2E-13 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS20260 bafaa19620417c10ba3cbaf997b48e1e 342 PANTHER PTHR33055 3 340 1.2E-126 T 22-04-2016 NHAM_RS09640 3e8ba99795e972034f9be92109d0692f 93 Pfam PF02583 Metal-sensitive transcriptional repressor 10 86 1.9E-19 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 NHAM_RS18785 94438320b5729ef2186e5894679b73ba 222 Pfam PF02677 Uncharacterized BCR, COG1636 18 192 1.2E-62 T 22-04-2016 IPR003828 Protein of unknown function DUF208 NHAM_RS18785 94438320b5729ef2186e5894679b73ba 222 PANTHER PTHR36701 2 218 2.8E-90 T 22-04-2016 NHAM_RS10280 6c4b92f74f5e3c878dea8154c5a4ddff 127 Pfam PF10711 Hypothetical protein (DUF2513) 2 105 4.4E-27 T 22-04-2016 IPR019650 Protein of unknown function DUF2513 NHAM_RS10150 ddfeeb8372743cf18a0d012a9785a26d 129 SUPERFAMILY SSF81442 8 127 2.35E-5 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 NHAM_RS00270 3f6fb5e56858f202affd20a1e875e951 106 Pfam PF07238 PilZ domain 4 93 2.8E-6 T 22-04-2016 IPR009875 PilZ domain GO:0035438 NHAM_RS00270 3f6fb5e56858f202affd20a1e875e951 106 SUPERFAMILY SSF141371 3 89 1.43E-8 T 22-04-2016 NHAM_RS14005 e19d963bb97904c500b54c9eff9086be 62 Pfam PF13770 Domain of unknown function (DUF4169) 2 56 5.1E-21 T 22-04-2016 IPR025227 Protein of unknown function DUF4169 NHAM_RS12675 18429b569678ff41d1aef4ce73da7187 104 Pfam PF05521 Phage head-tail joining protein 8 99 1.8E-14 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor NHAM_RS06390 0b2201035e10da6dd5684a82ceb23fdb 72 SUPERFAMILY SSF50346 12 59 5.23E-5 T 22-04-2016 IPR011033 PRC-barrel-like NHAM_RS13515 41d45796083b1e21444ad1b8f3b517c0 258 Pfam PF11738 Protein of unknown function (DUF3298) 170 231 1.6E-7 T 22-04-2016 IPR021729 Domain of unknown function DUF3298 NHAM_RS13515 41d45796083b1e21444ad1b8f3b517c0 258 Gene3D G3DSA:3.90.640.20 204 245 3.3E-10 T 22-04-2016 IPR021729 Domain of unknown function DUF3298 NHAM_RS13515 41d45796083b1e21444ad1b8f3b517c0 258 Pfam PF13739 Domain of unknown function (DUF4163) 60 120 1.3E-6 T 22-04-2016 IPR025303 Domain of unknown function DUF4163 NHAM_RS13515 41d45796083b1e21444ad1b8f3b517c0 258 Gene3D G3DSA:3.30.565.40 24 134 4.8E-7 T 22-04-2016 IPR025303 Domain of unknown function DUF4163 NHAM_RS00805 754763afd77715c0d17baca889533494 174 Pfam PF10003 Integral membrane protein (DUF2244) 22 161 2.4E-46 T 22-04-2016 IPR019253 Protein of unknown function DUF2244, transmembrane NHAM_RS00805 754763afd77715c0d17baca889533494 174 PIRSF PIRSF032162 1 170 4.0E-62 T 22-04-2016 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane NHAM_RS15965 340570e8176eaceb8ec1c763c55d8a33 156 SUPERFAMILY SSF55826 7 149 6.02E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NHAM_RS15965 340570e8176eaceb8ec1c763c55d8a33 156 Gene3D G3DSA:3.90.960.10 8 147 8.9E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NHAM_RS15965 340570e8176eaceb8ec1c763c55d8a33 156 Pfam PF04073 Aminoacyl-tRNA editing domain 23 143 4.6E-25 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NHAM_RS00080 31b3eca5edab1fa8f35fd5d1b2cd651b 376 Pfam PF10908 Protein of unknown function (DUF2778) 271 375 5.1E-26 T 22-04-2016 IPR021225 Protein of unknown function DUF2778 NHAM_RS20305 e185e8c9a72fc51d691f9dc88a1e6389 417 SUPERFAMILY SSF55166 240 343 5.49E-6 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NHAM_RS10005 228969586ba829c50717083974d17eb4 125 SUPERFAMILY SSF48295 27 79 2.51E-8 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS10005 228969586ba829c50717083974d17eb4 125 Pfam PF01527 Transposase 31 101 4.3E-12 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NHAM_RS10005 228969586ba829c50717083974d17eb4 125 Gene3D G3DSA:1.10.10.60 36 82 2.1E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS10005 228969586ba829c50717083974d17eb4 125 PANTHER PTHR37936 9 85 5.6E-13 T 22-04-2016 NHAM_RS14805 190c5e3b9c606634e923ed399ceafdda 401 Pfam PF06904 Extensin-like protein C-terminus 208 353 7.9E-50 T 22-04-2016 IPR009683 Extensin-like, C-terminal NHAM_RS05350 599bbbca2c5c0704a10b9d3717b8ccbe 201 SUPERFAMILY SSF53335 38 170 1.01E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS05350 599bbbca2c5c0704a10b9d3717b8ccbe 201 Pfam PF08241 Methyltransferase domain 38 89 2.6E-7 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NHAM_RS05350 599bbbca2c5c0704a10b9d3717b8ccbe 201 Gene3D G3DSA:3.40.50.150 23 171 5.8E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS20570 2c49959d0e4d714c1452fcd7db11ecde 125 TIGRFAM TIGR02301 TIGR02301: TIGR02301 family protein 8 123 2.9E-48 T 22-04-2016 IPR012645 Conserved hypothetical protein CHP02301 NHAM_RS20570 2c49959d0e4d714c1452fcd7db11ecde 125 Pfam PF09539 Protein of unknown function (DUF2385) 28 123 3.1E-38 T 22-04-2016 IPR012645 Conserved hypothetical protein CHP02301 NHAM_RS09820 25a80bff721525abc9a86ba6f960c016 101 SUPERFAMILY SSF46626 3 100 5.35E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS09820 25a80bff721525abc9a86ba6f960c016 101 PANTHER PTHR37823 20 101 2.7E-13 T 22-04-2016 NHAM_RS09820 25a80bff721525abc9a86ba6f960c016 101 Gene3D G3DSA:1.10.760.10 13 100 9.3E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS00550 eabfb93a23d3077f763aed1e1029920a 407 ProSitePatterns PS01007 Transposases, Mutator family, signature. 234 258 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS00550 eabfb93a23d3077f763aed1e1029920a 407 Pfam PF00872 Transposase, Mutator family 13 380 9.8E-129 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS00550 eabfb93a23d3077f763aed1e1029920a 407 PANTHER PTHR33217 7 402 5.5E-161 T 22-04-2016 NHAM_RS15450 eabfb93a23d3077f763aed1e1029920a 407 ProSitePatterns PS01007 Transposases, Mutator family, signature. 234 258 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS15450 eabfb93a23d3077f763aed1e1029920a 407 Pfam PF00872 Transposase, Mutator family 13 380 9.8E-129 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 NHAM_RS15450 eabfb93a23d3077f763aed1e1029920a 407 PANTHER PTHR33217 7 402 5.5E-161 T 22-04-2016 NHAM_RS00275 5760e90285b51b4ca3591ac54680aec2 240 PANTHER PTHR22572 7 236 5.9E-64 T 22-04-2016 NHAM_RS00275 5760e90285b51b4ca3591ac54680aec2 240 Pfam PF00483 Nucleotidyl transferase 7 150 2.9E-16 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 NHAM_RS00275 5760e90285b51b4ca3591ac54680aec2 240 Gene3D G3DSA:3.90.550.10 4 234 9.5E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS00275 5760e90285b51b4ca3591ac54680aec2 240 PANTHER PTHR22572:SF15 7 236 5.9E-64 T 22-04-2016 NHAM_RS00275 5760e90285b51b4ca3591ac54680aec2 240 SUPERFAMILY SSF53448 4 235 5.63E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS03555 0c513eed76b2a0ab463a9b32013cb45b 126 Pfam PF07886 BA14K-like protein 98 126 9.6E-13 T 22-04-2016 IPR012413 BA14k family GO:0009405 NHAM_RS11315 c49007ec45927a073d1b6e9b658b72e9 99 PRINTS PR01727 Prokaryotic integration host factor signature 84 98 1.4E-12 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS11315 c49007ec45927a073d1b6e9b658b72e9 99 PRINTS PR01727 Prokaryotic integration host factor signature 68 81 1.4E-12 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS11315 c49007ec45927a073d1b6e9b658b72e9 99 PRINTS PR01727 Prokaryotic integration host factor signature 50 65 1.4E-12 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS11315 c49007ec45927a073d1b6e9b658b72e9 99 SUPERFAMILY SSF47729 12 99 1.62E-27 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NHAM_RS11315 c49007ec45927a073d1b6e9b658b72e9 99 Gene3D G3DSA:4.10.520.10 10 99 3.3E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NHAM_RS11315 c49007ec45927a073d1b6e9b658b72e9 99 SMART SM00411 11 99 1.2E-26 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS11315 c49007ec45927a073d1b6e9b658b72e9 99 PANTHER PTHR33175 11 99 2.2E-33 T 22-04-2016 NHAM_RS11315 c49007ec45927a073d1b6e9b658b72e9 99 Pfam PF00216 Bacterial DNA-binding protein 12 99 4.3E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 NHAM_RS08480 834ca8671ad0efcada963f7a7a608202 486 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 86 344 1.2E-72 T 22-04-2016 IPR019285 Protein of unknown function DUF2336 NHAM_RS08780 11cc794a2cc9043d27c99b037214a234 406 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 44 382 1.2E-48 T 22-04-2016 IPR006427 Phage portal protein, HK97 NHAM_RS08780 11cc794a2cc9043d27c99b037214a234 406 Pfam PF04860 Phage portal protein 52 376 4.2E-71 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein NHAM_RS11115 97052edbec21634b8348c0563ce74467 706 PANTHER PTHR31998 1 706 0.0 T 22-04-2016 NHAM_RS11115 97052edbec21634b8348c0563ce74467 706 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 5 706 1.7E-270 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 NHAM_RS11115 97052edbec21634b8348c0563ce74467 706 Pfam PF03030 Inorganic H+ pyrophosphatase 12 699 4.0E-259 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 NHAM_RS11115 97052edbec21634b8348c0563ce74467 706 PIRSF PIRSF001265 1 706 6.1E-244 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 NHAM_RS11115 97052edbec21634b8348c0563ce74467 706 PANTHER PTHR31998:SF0 1 706 0.0 T 22-04-2016 NHAM_RS11115 97052edbec21634b8348c0563ce74467 706 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 705 25.274 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 NHAM_RS10975 aff4ceaaecc666da5473f8c4d16014f7 61 Pfam PF12728 Helix-turn-helix domain 4 53 1.0E-7 T 22-04-2016 NHAM_RS04495 582d2ab4bdb738f428c791adeb451a64 215 Pfam PF01144 Coenzyme A transferase 5 213 5.3E-53 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NHAM_RS04495 582d2ab4bdb738f428c791adeb451a64 215 PANTHER PTHR13707 5 212 3.2E-77 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NHAM_RS04495 582d2ab4bdb738f428c791adeb451a64 215 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 212 3.7E-60 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 NHAM_RS04495 582d2ab4bdb738f428c791adeb451a64 215 SUPERFAMILY SSF100950 4 212 5.58E-69 T 22-04-2016 NHAM_RS04495 582d2ab4bdb738f428c791adeb451a64 215 SMART SM00882 3 214 6.6E-60 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NHAM_RS04495 582d2ab4bdb738f428c791adeb451a64 215 Gene3D G3DSA:3.40.1080.10 5 212 4.8E-73 T 22-04-2016 NHAM_RS17665 74181569c7cc666011c4228a3b1077b3 343 Pfam PF03595 Voltage-dependent anion channel 7 328 6.7E-50 T 22-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 NHAM_RS17665 74181569c7cc666011c4228a3b1077b3 343 PANTHER PTHR31686 5 343 1.6E-15 T 22-04-2016 NHAM_RS23945 f022570b6900c76f783fdb00460b3889 61 SUPERFAMILY SSF53448 2 57 1.92E-13 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS23945 f022570b6900c76f783fdb00460b3889 61 PANTHER PTHR21485 2 61 6.2E-13 T 22-04-2016 NHAM_RS23945 f022570b6900c76f783fdb00460b3889 61 Gene3D G3DSA:3.90.550.10 2 61 1.1E-16 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS23945 f022570b6900c76f783fdb00460b3889 61 Pfam PF02348 Cytidylyltransferase 3 59 4.4E-11 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 NHAM_RS23870 4218ce469c59df7846735cf310330342 909 Pfam PF13699 Domain of unknown function (DUF4157) 72 149 6.0E-29 T 22-04-2016 IPR025295 Domain of unknown function DUF4157 NHAM_RS23870 4218ce469c59df7846735cf310330342 909 Pfam PF15500 Putative RNase-like toxin, toxin_1 642 750 1.6E-43 T 22-04-2016 IPR029137 Putative RNase-like toxin, toxin1 NHAM_RS23870 4218ce469c59df7846735cf310330342 909 Pfam PF15543 Bacterial toxin 5 778 903 2.5E-57 T 22-04-2016 IPR032759 Bacterial toxin 5 NHAM_RS04255 dab9f74322a9084a0d924d8f1df34e91 202 SUPERFAMILY SSF69255 34 111 1.8E-15 T 22-04-2016 NHAM_RS04255 dab9f74322a9084a0d924d8f1df34e91 202 Gene3D G3DSA:2.40.50.230 48 111 9.3E-12 T 22-04-2016 IPR006531 Gp5 N-terminal NHAM_RS00950 59d5d80677ba7daf69e65140a8a56dab 391 SUPERFAMILY SSF56059 105 318 8.13E-25 T 22-04-2016 NHAM_RS00950 59d5d80677ba7daf69e65140a8a56dab 391 Gene3D G3DSA:3.30.1490.20 108 199 8.2E-10 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NHAM_RS00950 59d5d80677ba7daf69e65140a8a56dab 391 Gene3D G3DSA:3.30.470.20 206 317 2.4E-17 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NHAM_RS13320 f4b0be588c4b6d742ddb66e381f5a3e6 107 PANTHER PTHR30388 5 107 1.9E-41 T 22-04-2016 NHAM_RS13320 f4b0be588c4b6d742ddb66e381f5a3e6 107 Pfam PF02625 XdhC and CoxI family 15 82 6.5E-24 T 22-04-2016 IPR003777 XdhC- CoxI NHAM_RS23620 6ea2137eb353683047cdf4af87671d76 296 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 5 236 3.0E-51 T 22-04-2016 IPR018712 Domain of unknown function DUF2235 NHAM_RS23620 6ea2137eb353683047cdf4af87671d76 296 PANTHER PTHR33840 2 248 2.1E-62 T 22-04-2016 NHAM_RS23620 6ea2137eb353683047cdf4af87671d76 296 PANTHER PTHR33840:SF4 2 248 2.1E-62 T 22-04-2016 NHAM_RS15190 5974a19920980e5a32dfb0824fcfdcb1 269 SUPERFAMILY SSF69618 7 267 5.1E-49 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS15190 5974a19920980e5a32dfb0824fcfdcb1 269 Gene3D G3DSA:3.40.50.10090 133 266 2.2E-24 T 22-04-2016 NHAM_RS15190 5974a19920980e5a32dfb0824fcfdcb1 269 Gene3D G3DSA:3.40.50.10090 3 132 8.1E-23 T 22-04-2016 NHAM_RS15190 5974a19920980e5a32dfb0824fcfdcb1 269 Pfam PF02602 Uroporphyrinogen-III synthase HemD 20 251 2.5E-33 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 NHAM_RS15190 5974a19920980e5a32dfb0824fcfdcb1 269 PANTHER PTHR40082 1 251 1.7E-34 T 22-04-2016 NHAM_RS02205 a57ed8a68988fb036788f618b08442c3 650 SUPERFAMILY SSF56925 30 226 7.85E-26 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS02205 a57ed8a68988fb036788f618b08442c3 650 Pfam PF13505 Outer membrane protein beta-barrel domain 29 220 1.0E-11 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel NHAM_RS02205 a57ed8a68988fb036788f618b08442c3 650 Pfam PF04966 Carbohydrate-selective porin, OprB family 269 650 2.6E-66 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 NHAM_RS02205 a57ed8a68988fb036788f618b08442c3 650 Gene3D G3DSA:2.40.160.20 30 221 6.3E-31 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NHAM_RS02205 a57ed8a68988fb036788f618b08442c3 650 PANTHER PTHR34001 3 232 9.5E-50 T 22-04-2016 NHAM_RS12920 e4784edef7147c30e9dd5de678d071c4 79 Gene3D G3DSA:1.10.10.10 30 74 4.6E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS12920 e4784edef7147c30e9dd5de678d071c4 79 SUPERFAMILY SSF46955 27 73 1.61E-6 T 22-04-2016 IPR009061 Putative DNA-binding domain NHAM_RS09305 09b523383d8603675de399f87ecab388 160 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 12 154 20.903 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 NHAM_RS09305 09b523383d8603675de399f87ecab388 160 SUPERFAMILY SSF48013 13 154 2.62E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NHAM_RS09305 09b523383d8603675de399f87ecab388 160 Gene3D G3DSA:1.10.940.10 15 157 7.7E-38 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NHAM_RS09305 09b523383d8603675de399f87ecab388 160 PANTHER PTHR11078 10 154 5.5E-36 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 NHAM_RS09305 09b523383d8603675de399f87ecab388 160 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 15 152 6.1E-38 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 NHAM_RS09305 09b523383d8603675de399f87ecab388 160 Pfam PF01029 NusB family 18 151 5.7E-32 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NHAM_RS04970 98d9cd6741500ad4f169c3969e47eb82 381 PANTHER PTHR34219 7 380 3.8E-59 T 22-04-2016 NHAM_RS04970 98d9cd6741500ad4f169c3969e47eb82 381 Pfam PF03929 PepSY-associated TM region 18 372 9.4E-55 T 22-04-2016 IPR005625 PepSY-associated TM protein NHAM_RS14775 9eb577c36c4c728792a6d95f950dde67 132 Pfam PF07681 DoxX 13 90 2.7E-11 T 22-04-2016 IPR032808 DoxX family NHAM_RS14775 9eb577c36c4c728792a6d95f950dde67 132 PANTHER PTHR33452:SF4 1 131 4.8E-44 T 22-04-2016 NHAM_RS14775 9eb577c36c4c728792a6d95f950dde67 132 PANTHER PTHR33452 1 131 4.8E-44 T 22-04-2016 NHAM_RS10360 5085070eb7945d28a72d2722f231c84a 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 3 50 6.3E-15 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) NHAM_RS06825 a505d80211333e207b9d2c23122d354c 528 Gene3D G3DSA:1.20.1330.10 355 476 3.1E-8 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NHAM_RS06825 a505d80211333e207b9d2c23122d354c 528 SUPERFAMILY SSF64518 1 255 7.59E-21 T 22-04-2016 NHAM_RS06825 a505d80211333e207b9d2c23122d354c 528 Pfam PF00700 Bacterial flagellin C-terminal helical region 443 527 2.4E-6 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NHAM_RS06825 a505d80211333e207b9d2c23122d354c 528 SUPERFAMILY SSF64518 236 528 5.1E-31 T 22-04-2016 NHAM_RS06825 a505d80211333e207b9d2c23122d354c 528 Pfam PF00669 Bacterial flagellin N-terminal helical region 12 113 1.2E-7 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NHAM_RS13695 1c1e2b18c80981f9b573695e6e3cdf16 313 PANTHER PTHR22953 91 245 6.0E-16 T 22-04-2016 NHAM_RS13695 1c1e2b18c80981f9b573695e6e3cdf16 313 Gene3D G3DSA:3.60.21.10 52 276 7.9E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS13695 1c1e2b18c80981f9b573695e6e3cdf16 313 SUPERFAMILY SSF56300 54 308 2.17E-44 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like NHAM_RS13695 1c1e2b18c80981f9b573695e6e3cdf16 313 Pfam PF00149 Calcineurin-like phosphoesterase 54 246 3.5E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NHAM_RS09265 24dfb7613715460ce01dc773b0a5b834 334 Pfam PF13271 Domain of unknown function (DUF4062) 6 87 4.1E-26 T 22-04-2016 IPR025139 Domain of unknown function DUF4062 NHAM_RS07355 1c0380c535a0d309ffa6d17adac48f6e 195 PANTHER PTHR30009 31 175 9.9E-29 T 22-04-2016 NHAM_RS07355 1c0380c535a0d309ffa6d17adac48f6e 195 Pfam PF03918 Cytochrome C biogenesis protein 40 184 3.7E-54 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family NHAM_RS02930 f187126b9e5b28f044667c46b8ee1a0a 552 SUPERFAMILY SSF48452 89 293 3.8E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS02930 f187126b9e5b28f044667c46b8ee1a0a 552 PIRSF PIRSF031802 1 546 7.0E-212 T 22-04-2016 IPR016982 Uncharacterised conserved protein UCP031802 NHAM_RS02930 f187126b9e5b28f044667c46b8ee1a0a 552 Gene3D G3DSA:1.25.40.10 89 350 1.9E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS02930 f187126b9e5b28f044667c46b8ee1a0a 552 Pfam PF07219 HemY protein N-terminus 26 132 5.6E-28 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 NHAM_RS09555 2a41df5a5ee32d462e61ee6d3ad7117d 354 Gene3D G3DSA:2.130.10.10 53 219 9.1E-20 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NHAM_RS09555 2a41df5a5ee32d462e61ee6d3ad7117d 354 Gene3D G3DSA:2.130.10.10 220 307 6.9E-7 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NHAM_RS09555 2a41df5a5ee32d462e61ee6d3ad7117d 354 SUPERFAMILY SSF51004 75 322 7.72E-30 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain NHAM_RS10285 f31bc6097aea51d174efb6968aff6d55 111 Pfam PF05521 Phage head-tail joining protein 8 106 3.0E-17 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor NHAM_RS10285 f31bc6097aea51d174efb6968aff6d55 111 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 7 107 4.1E-7 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor NHAM_RS02615 1e23a40f2a5dcb36461482fd8cb28a69 91 Gene3D G3DSA:3.10.290.10 2 86 3.1E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS02615 1e23a40f2a5dcb36461482fd8cb28a69 91 SUPERFAMILY SSF55174 3 84 1.27E-21 T 22-04-2016 NHAM_RS02615 1e23a40f2a5dcb36461482fd8cb28a69 91 Pfam PF01479 S4 domain 4 51 7.0E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS02615 1e23a40f2a5dcb36461482fd8cb28a69 91 SMART SM00363 4 70 1.8E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 NHAM_RS15210 02770cf5c412ad5276ba1ac459193892 74 Gene3D G3DSA:3.40.50.300 8 32 3.3E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS15210 02770cf5c412ad5276ba1ac459193892 74 Pfam PF01695 IstB-like ATP binding protein 3 45 4.6E-6 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 NHAM_RS09875 116b64fc683fc11a63c64d4df93804fd 369 PANTHER PTHR23028 9 347 6.9E-22 T 22-04-2016 NHAM_RS09875 116b64fc683fc11a63c64d4df93804fd 369 Pfam PF01757 Acyltransferase family 12 330 3.2E-21 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 NHAM_RS08095 ea1e91259b05d284a6b6fa4146ea2e2d 171 Pfam PF04355 SmpA / OmlA family 58 131 5.7E-17 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 NHAM_RS17565 1e787ccb5893ec9b429672db29963959 477 Gene3D G3DSA:3.40.50.720 4 171 9.7E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS17565 1e787ccb5893ec9b429672db29963959 477 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 16 157 6.4E-34 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 NHAM_RS17565 1e787ccb5893ec9b429672db29963959 477 Gene3D G3DSA:3.30.360.30 172 477 5.8E-150 T 22-04-2016 IPR023181 Homospermidine synthase-like, domain KEGG: 00960+2.5.1.44 NHAM_RS17565 1e787ccb5893ec9b429672db29963959 477 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 161 444 6.2E-25 T 22-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal NHAM_RS05780 ff3dd7dd030704a9b3a1107d87047421 539 Gene3D G3DSA:3.40.50.1110 76 188 6.9E-15 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS05780 ff3dd7dd030704a9b3a1107d87047421 539 Gene3D G3DSA:3.40.50.1110 260 365 6.9E-15 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS05780 ff3dd7dd030704a9b3a1107d87047421 539 Pfam PF04311 Protein of unknown function (DUF459) 248 400 3.4E-35 T 22-04-2016 IPR007407 Protein of unknown function DUF459 NHAM_RS05780 ff3dd7dd030704a9b3a1107d87047421 539 Pfam PF04311 Protein of unknown function (DUF459) 94 198 1.5E-10 T 22-04-2016 IPR007407 Protein of unknown function DUF459 NHAM_RS05780 ff3dd7dd030704a9b3a1107d87047421 539 SUPERFAMILY SSF52266 102 185 1.42E-16 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS05780 ff3dd7dd030704a9b3a1107d87047421 539 SUPERFAMILY SSF52266 257 367 1.42E-16 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain NHAM_RS04000 d738ccd3edbec0ed319b6e3c8da67b5b 136 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 19 84 7.7E-10 T 22-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NHAM_RS04000 d738ccd3edbec0ed319b6e3c8da67b5b 136 SUPERFAMILY SSF55961 6 82 5.21E-21 T 22-04-2016 NHAM_RS04000 d738ccd3edbec0ed319b6e3c8da67b5b 136 Gene3D G3DSA:3.30.530.20 4 82 1.7E-20 T 22-04-2016 IPR023393 START-like domain NHAM_RS11190 2ed7b5b2c56d043d94a495cfac345ace 177 Pfam PF07987 Domain of unkown function (DUF1775) 28 173 2.0E-50 T 22-04-2016 IPR012533 GLE1, N-terminal, bacteria NHAM_RS16925 d5fa95a6720e3d7313a7a767033c09a5 246 SUPERFAMILY SSF53335 29 195 7.91E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS16925 d5fa95a6720e3d7313a7a767033c09a5 246 Gene3D G3DSA:3.40.50.150 45 174 9.6E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS16925 d5fa95a6720e3d7313a7a767033c09a5 246 Pfam PF13578 Methyltransferase domain 60 169 3.7E-9 T 22-04-2016 NHAM_RS17015 6853eb716ff282a81c71762d89f9309e 254 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 92 152 5.8E-15 T 22-04-2016 NHAM_RS17015 6853eb716ff282a81c71762d89f9309e 254 SUPERFAMILY SSF55166 34 155 4.32E-18 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain NHAM_RS14170 53a187e349ce4c6e93171ce680229a55 544 SUPERFAMILY SSF53448 44 163 2.14E-8 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS08455 93f67c5c2bb888d758f45f1a12428928 307 Gene3D G3DSA:3.90.226.10 88 193 2.1E-6 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS08455 93f67c5c2bb888d758f45f1a12428928 307 SUPERFAMILY SSF52096 82 199 7.06E-9 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS02640 c95bc369dd8cc6360781dfa9abd60c0e 92 PANTHER PTHR33884:SF1 1 86 3.1E-27 T 22-04-2016 NHAM_RS02640 c95bc369dd8cc6360781dfa9abd60c0e 92 PANTHER PTHR33884 1 86 3.1E-27 T 22-04-2016 NHAM_RS02640 c95bc369dd8cc6360781dfa9abd60c0e 92 Pfam PF04226 Transglycosylase associated protein 36 80 8.7E-14 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 NHAM_RS03595 2dcc67eddaeaafc623bf81112e6d5a21 230 Pfam PF13860 FlgD Ig-like domain 122 186 5.9E-9 T 22-04-2016 IPR025965 FlgD Ig-like domain NHAM_RS03595 2dcc67eddaeaafc623bf81112e6d5a21 230 PANTHER PTHR30435:SF15 42 204 5.6E-23 T 22-04-2016 NHAM_RS03595 2dcc67eddaeaafc623bf81112e6d5a21 230 Pfam PF13861 FlgD Tudor-like domain 95 226 1.1E-11 T 22-04-2016 IPR025963 FlgD Tudor-like domain NHAM_RS03595 2dcc67eddaeaafc623bf81112e6d5a21 230 PANTHER PTHR30435 42 204 5.6E-23 T 22-04-2016 NHAM_RS03595 2dcc67eddaeaafc623bf81112e6d5a21 230 Pfam PF03963 Flagellar hook capping protein - N-terminal region 18 86 1.3E-19 T 22-04-2016 IPR005648 Flagellar hook capping protein NHAM_RS19805 22cfa475620034b008edcd23a8f20e81 393 Pfam PF10134 Replication initiator protein A 115 361 4.1E-32 T 22-04-2016 IPR018777 Replication initiator protein A NHAM_RS19805 22cfa475620034b008edcd23a8f20e81 393 Pfam PF11638 DnaA N-terminal domain 8 63 1.7E-7 T 22-04-2016 IPR024633 DnaA N-terminal domain NHAM_RS12405 fba3772435e44b1daa49a708e9fd211d 89 Gene3D G3DSA:1.10.10.10 11 87 2.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS12405 fba3772435e44b1daa49a708e9fd211d 89 SUPERFAMILY SSF46785 11 87 1.41E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS12405 fba3772435e44b1daa49a708e9fd211d 89 Pfam PF11625 Protein of unknown function (DUF3253) 11 86 2.3E-22 T 22-04-2016 IPR021660 Protein of unknown function DUF3253 NHAM_RS07205 c9896e2b444ef9fa8abc6ca429e1b009 391 Pfam PF04860 Phage portal protein 51 379 2.0E-86 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein NHAM_RS07205 c9896e2b444ef9fa8abc6ca429e1b009 391 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 43 386 6.7E-69 T 22-04-2016 IPR006427 Phage portal protein, HK97 NHAM_RS10805 cf740ebcf6b0ba533330d52d2fc5f787 534 PANTHER PTHR22855:SF35 1 534 0.0 T 22-04-2016 NHAM_RS10805 cf740ebcf6b0ba533330d52d2fc5f787 534 Gene3D G3DSA:3.90.226.10 276 529 4.7E-91 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS10805 cf740ebcf6b0ba533330d52d2fc5f787 534 Gene3D G3DSA:3.90.226.10 31 266 6.8E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS10805 cf740ebcf6b0ba533330d52d2fc5f787 534 SUPERFAMILY SSF52096 22 269 2.56E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS10805 cf740ebcf6b0ba533330d52d2fc5f787 534 PANTHER PTHR22855 1 534 0.0 T 22-04-2016 NHAM_RS10805 cf740ebcf6b0ba533330d52d2fc5f787 534 Pfam PF01039 Carboxyl transferase domain 47 524 3.2E-146 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 NHAM_RS10805 cf740ebcf6b0ba533330d52d2fc5f787 534 SUPERFAMILY SSF52096 275 534 5.36E-84 T 22-04-2016 IPR029045 ClpP/crotonase-like domain NHAM_RS13415 2070b515acbaf525c917a6b0e363bc4c 201 Gene3D G3DSA:1.10.101.10 138 194 2.4E-8 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS13415 2070b515acbaf525c917a6b0e363bc4c 201 SUPERFAMILY SSF47090 139 198 2.2E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS13415 2070b515acbaf525c917a6b0e363bc4c 201 Pfam PF01471 Putative peptidoglycan binding domain 140 185 9.9E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like NHAM_RS04580 efc3e183944c2db6926d920229ef4fb3 308 Pfam PF11453 Protein of unknown function (DUF2950) 31 303 2.1E-110 T 22-04-2016 IPR021556 Protein of unknown function DUF2950 NHAM_RS09260 37f7cf65017187fb7da4768e69e874ae 306 PRINTS PR01217 Proline rich extensin signature 128 144 4.3E-12 T 22-04-2016 NHAM_RS09260 37f7cf65017187fb7da4768e69e874ae 306 PRINTS PR01217 Proline rich extensin signature 259 284 4.3E-12 T 22-04-2016 NHAM_RS09260 37f7cf65017187fb7da4768e69e874ae 306 PRINTS PR01217 Proline rich extensin signature 107 128 4.3E-12 T 22-04-2016 NHAM_RS09260 37f7cf65017187fb7da4768e69e874ae 306 PRINTS PR01217 Proline rich extensin signature 80 92 4.3E-12 T 22-04-2016 NHAM_RS09260 37f7cf65017187fb7da4768e69e874ae 306 PRINTS PR01217 Proline rich extensin signature 39 51 4.3E-12 T 22-04-2016 NHAM_RS09260 37f7cf65017187fb7da4768e69e874ae 306 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 153 244 1.4E-34 T 22-04-2016 IPR019225 Protein of unknown function DUF2155 NHAM_RS16580 9211c575ce8bcf9fe0262e8cf09c3da8 222 SUPERFAMILY SSF52540 4 81 7.98E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16580 9211c575ce8bcf9fe0262e8cf09c3da8 222 Gene3D G3DSA:3.40.50.300 6 81 1.7E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16580 9211c575ce8bcf9fe0262e8cf09c3da8 222 SUPERFAMILY SSF52540 91 168 2.35E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS16580 9211c575ce8bcf9fe0262e8cf09c3da8 222 SUPERFAMILY SSF52540 16 53 2.35E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS07240 bd771b2bcfcf0b1030b2dda154d87620 189 Pfam PF05135 Phage gp6-like head-tail connector protein 15 50 6.7E-5 T 22-04-2016 IPR021146 Phage gp6-like head-tail connector protein NHAM_RS07240 bd771b2bcfcf0b1030b2dda154d87620 189 Pfam PF05135 Phage gp6-like head-tail connector protein 127 185 1.3E-6 T 22-04-2016 IPR021146 Phage gp6-like head-tail connector protein NHAM_RS07240 bd771b2bcfcf0b1030b2dda154d87620 189 TIGRFAM TIGR02215 phage_chp_gp8: phage conserved hypothetical protein, phiE125 gp8 family 1 186 2.0E-63 T 22-04-2016 IPR011738 Phage conserved hypothetical protein NHAM_RS19620 7234be6024e87b62451931b007eea671 326 PANTHER PTHR32552 62 294 3.0E-19 T 22-04-2016 NHAM_RS19620 7234be6024e87b62451931b007eea671 326 PANTHER PTHR32552 29 40 3.0E-19 T 22-04-2016 NHAM_RS19620 7234be6024e87b62451931b007eea671 326 SUPERFAMILY SSF48295 1 60 6.28E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 NHAM_RS19620 7234be6024e87b62451931b007eea671 326 Gene3D G3DSA:1.10.10.60 7 52 9.9E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS19620 7234be6024e87b62451931b007eea671 326 Gene3D G3DSA:1.10.10.60 305 321 9.9E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS19620 7234be6024e87b62451931b007eea671 326 SUPERFAMILY SSF53098 137 300 1.77E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS19620 7234be6024e87b62451931b007eea671 326 Pfam PF00665 Integrase core domain 135 254 2.6E-33 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 NHAM_RS19620 7234be6024e87b62451931b007eea671 326 Gene3D G3DSA:3.30.420.10 133 292 2.7E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS19620 7234be6024e87b62451931b007eea671 326 Pfam PF13565 Homeodomain-like domain 35 109 1.6E-15 T 22-04-2016 NHAM_RS16370 9cdafb43c82c34a95c12a57f42eb9899 260 Pfam PF04344 Chemotaxis phosphatase, CheZ 168 258 3.3E-9 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- NHAM_RS16370 9cdafb43c82c34a95c12a57f42eb9899 260 SUPERFAMILY SSF75708 87 260 4.18E-41 T 22-04-2016 NHAM_RS16370 9cdafb43c82c34a95c12a57f42eb9899 260 Gene3D G3DSA:1.10.287.500 168 211 8.0E-13 T 22-04-2016 NHAM_RS16370 9cdafb43c82c34a95c12a57f42eb9899 260 Gene3D G3DSA:1.10.287.500 116 162 3.4E-6 T 22-04-2016 NHAM_RS18755 1bf788bcf798d9e64eadb941a7be0138 148 Gene3D G3DSA:2.60.120.10 41 133 1.1E-15 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS18755 1bf788bcf798d9e64eadb941a7be0138 148 SUPERFAMILY SSF51182 44 139 3.2E-16 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS18755 1bf788bcf798d9e64eadb941a7be0138 148 Pfam PF07883 Cupin domain 65 133 2.9E-13 T 22-04-2016 IPR013096 Cupin 2, conserved barrel NHAM_RS15775 f65f069277542f0b16923cd72ae06027 432 PANTHER PTHR33627 1 407 5.8E-80 T 22-04-2016 NHAM_RS15775 f65f069277542f0b16923cd72ae06027 432 PANTHER PTHR33627:SF1 1 407 5.8E-80 T 22-04-2016 NHAM_RS15775 f65f069277542f0b16923cd72ae06027 432 SUPERFAMILY SSF53098 25 227 1.97E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS15775 f65f069277542f0b16923cd72ae06027 432 SUPERFAMILY SSF53098 262 399 1.97E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS15775 f65f069277542f0b16923cd72ae06027 432 Pfam PF13546 DDE superfamily endonuclease 21 293 1.6E-95 T 22-04-2016 NHAM_RS13565 b96a845c03452225d0d223f1f4d615e1 92 Pfam PF02583 Metal-sensitive transcriptional repressor 7 84 6.1E-21 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 NHAM_RS13565 b96a845c03452225d0d223f1f4d615e1 92 PANTHER PTHR33677 1 92 9.7E-21 T 22-04-2016 NHAM_RS10045 d1bf94859e2902328698ef41bb37b215 71 Pfam PF13619 KTSC domain 9 66 2.8E-21 T 22-04-2016 IPR025309 KTSC domain NHAM_RS17350 cd80c56afae5e9b445f1f349ee74cca2 210 PIRSF PIRSF033924 2 210 7.9E-93 T 22-04-2016 IPR008325 Uncharacterised conserved protein UCP033924 NHAM_RS17350 cd80c56afae5e9b445f1f349ee74cca2 210 Pfam PF06577 Protein of unknown function (DUF1134) 52 210 1.7E-75 T 22-04-2016 IPR008325 Uncharacterised conserved protein UCP033924 NHAM_RS24095 0756078f40ad43d82ee98b07e86eb2fd 53 Pfam PF13817 IS66 C-terminal element 3 40 7.3E-17 T 22-04-2016 NHAM_RS20590 3c319133b2b6e63cb720ad89ee536e67 208 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 14 192 3.2E-73 T 22-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 NHAM_RS20590 3c319133b2b6e63cb720ad89ee536e67 208 PANTHER PTHR30037 1 207 1.3E-113 T 22-04-2016 NHAM_RS20590 3c319133b2b6e63cb720ad89ee536e67 208 Gene3D G3DSA:1.10.340.30 13 193 1.0E-77 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NHAM_RS20590 3c319133b2b6e63cb720ad89ee536e67 208 PANTHER PTHR30037:SF4 1 207 1.3E-113 T 22-04-2016 NHAM_RS20590 3c319133b2b6e63cb720ad89ee536e67 208 Pfam PF03352 Methyladenine glycosylase 17 192 2.7E-75 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 NHAM_RS20590 3c319133b2b6e63cb720ad89ee536e67 208 SUPERFAMILY SSF48150 13 196 2.55E-77 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 NHAM_RS12680 66d131bef8d03c88667eff2ad825bb95 141 Pfam PF11367 Protein of unknown function (DUF3168) 17 133 4.4E-19 T 22-04-2016 IPR021508 Protein of unknown function DUF3168 NHAM_RS09250 35eb238790a689c1fd6aa42d7bd5c839 136 PANTHER PTHR12910 21 134 1.6E-66 T 22-04-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 NHAM_RS09250 35eb238790a689c1fd6aa42d7bd5c839 136 PANTHER PTHR12910:SF3 21 134 1.6E-66 T 22-04-2016 NHAM_RS09250 35eb238790a689c1fd6aa42d7bd5c839 136 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 27 134 2.1E-28 T 22-04-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 NHAM_RS12125 7338da9b312c83547caa92a9d66057c3 97 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 6 79 4.3E-12 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative NHAM_RS10945 f432d4c229e27ba89c2a52da387a0159 233 Pfam PF04586 Caudovirus prohead serine protease 46 184 2.7E-19 T 22-04-2016 IPR006433 Prohead protease NHAM_RS18800 df7d7f65b335c2d4ae355805a9054c07 148 PANTHER PTHR33990 1 142 4.6E-39 T 22-04-2016 NHAM_RS18800 df7d7f65b335c2d4ae355805a9054c07 148 Gene3D G3DSA:3.10.180.10 7 139 4.6E-40 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS18800 df7d7f65b335c2d4ae355805a9054c07 148 SUPERFAMILY SSF54593 1 136 2.82E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NHAM_RS18800 df7d7f65b335c2d4ae355805a9054c07 148 PANTHER PTHR33990:SF1 1 142 4.6E-39 T 22-04-2016 NHAM_RS18800 df7d7f65b335c2d4ae355805a9054c07 148 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 135 3.7E-7 T 22-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase NHAM_RS07580 46c63b87e90b348763c8b04e76ea811a 117 Pfam PF01219 Prokaryotic diacylglycerol kinase 10 107 1.2E-28 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 NHAM_RS07580 46c63b87e90b348763c8b04e76ea811a 117 PANTHER PTHR34299:SF1 3 117 7.0E-29 T 22-04-2016 NHAM_RS07580 46c63b87e90b348763c8b04e76ea811a 117 PANTHER PTHR34299 3 117 7.0E-29 T 22-04-2016 NHAM_RS07580 46c63b87e90b348763c8b04e76ea811a 117 Gene3D G3DSA:1.10.3830.10 3 113 9.7E-34 T 22-04-2016 NHAM_RS15505 e3efc30155d9850c39ec19be8e468398 110 Pfam PF04892 VanZ like family 34 105 1.3E-8 T 22-04-2016 IPR006976 VanZ-like NHAM_RS15505 e3efc30155d9850c39ec19be8e468398 110 PIRSF PIRSF033367 1 110 7.3E-39 T 22-04-2016 IPR017015 Uncharacterised conserved protein UCP033367, VanZ, Bll3170 NHAM_RS04810 319d829603cf297387a0f0ef1a38b6ad 105 PANTHER PTHR36932 10 81 3.2E-13 T 22-04-2016 NHAM_RS04810 319d829603cf297387a0f0ef1a38b6ad 105 PANTHER PTHR36932:SF1 10 81 3.2E-13 T 22-04-2016 NHAM_RS16700 27a4dc4524f08c3c8c46bfd19f6895f5 168 PANTHER PTHR22769 19 136 2.4E-19 T 22-04-2016 NHAM_RS16700 27a4dc4524f08c3c8c46bfd19f6895f5 168 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NHAM_RS16700 27a4dc4524f08c3c8c46bfd19f6895f5 168 Gene3D G3DSA:3.90.79.10 30 151 2.2E-19 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS16700 27a4dc4524f08c3c8c46bfd19f6895f5 168 SUPERFAMILY SSF55811 18 152 2.17E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 NHAM_RS16700 27a4dc4524f08c3c8c46bfd19f6895f5 168 Pfam PF00293 NUDIX domain 31 139 1.4E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 NHAM_RS19825 b14e76120565fbde2fa324c7aeb80349 295 Pfam PF01548 Transposase 6 145 2.7E-15 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NHAM_RS19825 b14e76120565fbde2fa324c7aeb80349 295 PANTHER PTHR33055:SF2 2 285 4.3E-112 T 22-04-2016 NHAM_RS19825 b14e76120565fbde2fa324c7aeb80349 295 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 290 2.2E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NHAM_RS19825 b14e76120565fbde2fa324c7aeb80349 295 PANTHER PTHR33055 2 285 4.3E-112 T 22-04-2016 NHAM_RS10470 0cfd178f34eabdfc819a2f72a6f25e28 256 PANTHER PTHR31876:SF1 22 246 1.8E-74 T 22-04-2016 NHAM_RS10470 0cfd178f34eabdfc819a2f72a6f25e28 256 PANTHER PTHR31876 22 246 1.8E-74 T 22-04-2016 NHAM_RS10470 0cfd178f34eabdfc819a2f72a6f25e28 256 Pfam PF04367 Protein of unknown function (DUF502) 82 189 4.9E-30 T 22-04-2016 IPR007462 Protein of unknown function DUF502 NHAM_RS06230 8226a28620b058486ecc62b13ac38b3b 194 Pfam PF06282 Protein of unknown function (DUF1036) 37 149 1.6E-41 T 22-04-2016 IPR009380 Protein of unknown function DUF1036 NHAM_RS04750 f69e6d0bfa0da4d7b96d758f6c234875 81 Pfam PF10932 Protein of unknown function (DUF2783) 3 60 2.7E-25 T 22-04-2016 IPR021233 Protein of unknown function DUF2783 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 29 56 4.7E-39 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 66 92 4.7E-39 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 171 194 4.7E-39 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 140 163 4.7E-39 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 299 324 4.7E-39 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 197 224 4.7E-39 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 SUPERFAMILY SSF56655 5 323 1.83E-95 T 22-04-2016 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 325 40.76 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 Gene3D G3DSA:3.40.190.80 188 324 2.6E-50 T 22-04-2016 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 265 277 - T 22-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 PANTHER PTHR11556 30 323 9.1E-106 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 Gene3D G3DSA:3.30.540.10 18 184 1.0E-49 T 22-04-2016 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 PIRSF PIRSF500210 1 328 1.2E-112 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 185 2.2E-59 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 NHAM_RS19250 3811820da459185423aa8132e8e77476 345 PIRSF PIRSF000904 1 329 4.6E-109 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 NHAM_RS09275 755c42946eef235d68ce4eaec65ab5a8 63 Pfam PF12244 Protein of unknown function (DUF3606) 20 62 6.2E-13 T 22-04-2016 IPR022037 Protein of unknown function DUF3606 NHAM_RS18220 6a40ad0f4bd4f45d35abcdaddef82e6d 280 Pfam PF11412 Disulphide bond corrector protein DsbC 57 155 1.5E-19 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain NHAM_RS10435 e723d854bc27445809f1e6477a890532 250 Pfam PF06776 Invasion associated locus B (IalB) protein 74 207 2.8E-35 T 22-04-2016 IPR010642 Invasion protein B NHAM_RS16015 1c8df71de97178526b6e3e2d313f24ee 172 Pfam PF11749 Protein of unknown function (DUF3305) 12 153 1.9E-39 T 22-04-2016 IPR021736 Protein of unknown function DUF3305 NHAM_RS06925 6a6f05048b540aa961151b47ea51e7d9 65 Pfam PF01402 Ribbon-helix-helix protein, copG family 26 59 5.3E-5 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 NHAM_RS23930 4b39d77cc02205c2dd216470eb59ea86 69 Gene3D G3DSA:3.40.50.2000 7 46 1.9E-6 T 22-04-2016 NHAM_RS23930 4b39d77cc02205c2dd216470eb59ea86 69 SUPERFAMILY SSF53756 8 46 9.42E-5 T 22-04-2016 NHAM_RS05010 22ce13132e96a02ec67dd43934dc6be2 97 Pfam PF08734 GYD domain 5 93 1.2E-29 T 22-04-2016 IPR014845 Uncharacterised protein GYD NHAM_RS02860 3b063510d81fdd6ae39f8c80475666be 271 PANTHER PTHR23291:SF42 1 64 3.4E-80 T 22-04-2016 NHAM_RS02860 3b063510d81fdd6ae39f8c80475666be 271 PANTHER PTHR23291:SF42 91 271 3.4E-80 T 22-04-2016 NHAM_RS02860 3b063510d81fdd6ae39f8c80475666be 271 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 29 267 2.3E-60 T 22-04-2016 NHAM_RS02860 3b063510d81fdd6ae39f8c80475666be 271 PANTHER PTHR23291 1 64 3.4E-80 T 22-04-2016 IPR006214 Bax inhibitor 1-related NHAM_RS02860 3b063510d81fdd6ae39f8c80475666be 271 PANTHER PTHR23291 91 271 3.4E-80 T 22-04-2016 IPR006214 Bax inhibitor 1-related NHAM_RS03740 2ad363ca570395a172619450db4a5544 161 Pfam PF00190 Cupin 65 136 3.0E-7 T 22-04-2016 IPR006045 Cupin 1 GO:0045735 NHAM_RS03740 2ad363ca570395a172619450db4a5544 161 Gene3D G3DSA:2.60.120.10 35 157 5.4E-20 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS03740 2ad363ca570395a172619450db4a5544 161 SUPERFAMILY SSF51182 32 158 6.26E-23 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS17500 e099584a94e22bc379e9519aeb0741fe 186 Pfam PF10649 Protein of unknown function (DUF2478) 8 162 3.4E-45 T 22-04-2016 IPR018912 Protein of unknown function DUF2478 NHAM_RS02075 2b137ba070d1298a757a59830f87e382 190 Pfam PF07811 TadE-like protein 7 46 7.6E-9 T 22-04-2016 IPR012495 TadE-like NHAM_RS06235 914e9b64e3197aa7ddd9151542115dec 100 SUPERFAMILY SSF158757 2 79 2.62E-37 T 22-04-2016 IPR023163 SMc04008-like domain NHAM_RS06235 914e9b64e3197aa7ddd9151542115dec 100 Gene3D G3DSA:1.10.3340.10 2 86 1.1E-42 T 22-04-2016 IPR023163 SMc04008-like domain NHAM_RS06235 914e9b64e3197aa7ddd9151542115dec 100 Pfam PF06844 Protein of unknown function (DUF1244) 29 95 3.7E-36 T 22-04-2016 IPR023163 SMc04008-like domain NHAM_RS14875 46def133efb548205c6887abd80ae1ce 139 PANTHER PTHR30574 2 133 1.2E-27 T 22-04-2016 NHAM_RS14875 46def133efb548205c6887abd80ae1ce 139 PANTHER PTHR30574:SF1 2 133 1.2E-27 T 22-04-2016 NHAM_RS14875 46def133efb548205c6887abd80ae1ce 139 Pfam PF04143 Sulphur transport 46 126 2.3E-9 T 22-04-2016 IPR007272 Sulphur transport domain NHAM_RS14300 b1be986d87d9e354d107e28317996a6d 149 PANTHER PTHR36455:SF1 34 149 1.0E-62 T 22-04-2016 NHAM_RS14300 b1be986d87d9e354d107e28317996a6d 149 Pfam PF05717 IS66 Orf2 like protein 41 137 3.5E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 NHAM_RS14300 b1be986d87d9e354d107e28317996a6d 149 PANTHER PTHR36455 34 149 1.0E-62 T 22-04-2016 NHAM_RS06810 7e2a508b19a6cf1800c0b4042f907d56 587 SUPERFAMILY SSF64518 16 311 1.96E-19 T 22-04-2016 NHAM_RS06810 7e2a508b19a6cf1800c0b4042f907d56 587 SUPERFAMILY SSF64518 316 587 8.37E-15 T 22-04-2016 NHAM_RS06810 7e2a508b19a6cf1800c0b4042f907d56 587 Pfam PF00669 Bacterial flagellin N-terminal helical region 16 138 5.0E-5 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NHAM_RS21835 39c5d00ecec449864783a8026be38f44 142 PANTHER PTHR22807 1 110 4.4E-36 T 22-04-2016 NHAM_RS21835 39c5d00ecec449864783a8026be38f44 142 SUPERFAMILY SSF53335 7 110 5.84E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS21835 39c5d00ecec449864783a8026be38f44 142 Gene3D G3DSA:3.40.50.150 8 112 5.1E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NHAM_RS21835 39c5d00ecec449864783a8026be38f44 142 Pfam PF01189 16S rRNA methyltransferase RsmB/F 7 134 2.6E-33 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS21835 39c5d00ecec449864783a8026be38f44 142 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 26 38 2.0E-9 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS21835 39c5d00ecec449864783a8026be38f44 142 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 76 92 2.0E-9 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NHAM_RS12685 f18ec47282986e1f70345d125e658524 93 Pfam PF05135 Phage gp6-like head-tail connector protein 3 89 2.4E-22 T 22-04-2016 IPR021146 Phage gp6-like head-tail connector protein NHAM_RS12685 f18ec47282986e1f70345d125e658524 93 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 5 89 2.5E-7 T 22-04-2016 IPR006450 Phage protein of unkonwn function NHAM_RS12595 781edecb3aa15b2ad3c8c740da35496f 392 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 9 137 1.5E-13 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 NHAM_RS12595 781edecb3aa15b2ad3c8c740da35496f 392 PANTHER PTHR12286:SF4 1 391 1.5E-136 T 22-04-2016 NHAM_RS12595 781edecb3aa15b2ad3c8c740da35496f 392 PANTHER PTHR12286 1 391 1.5E-136 T 22-04-2016 NHAM_RS12595 781edecb3aa15b2ad3c8c740da35496f 392 Gene3D G3DSA:3.40.50.720 9 164 8.3E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS12595 781edecb3aa15b2ad3c8c740da35496f 392 SUPERFAMILY SSF51735 9 162 9.67E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain NHAM_RS11555 f72232ad1be94ec8f26551aea002416d 285 SUPERFAMILY SSF48452 63 185 5.24E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS11555 f72232ad1be94ec8f26551aea002416d 285 Pfam PF04184 ST7 protein 39 281 3.2E-12 T 22-04-2016 IPR007311 ST7 NHAM_RS11555 f72232ad1be94ec8f26551aea002416d 285 Gene3D G3DSA:1.25.40.10 63 238 1.9E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NHAM_RS17465 9d2e2d0b6059e25850af48a8a16c9cdd 203 PANTHER PTHR34478:SF2 1 197 5.1E-92 T 22-04-2016 NHAM_RS17465 9d2e2d0b6059e25850af48a8a16c9cdd 203 Gene3D G3DSA:1.20.1440.20 16 194 4.7E-61 T 22-04-2016 IPR023353 LemA-like domain NHAM_RS17465 9d2e2d0b6059e25850af48a8a16c9cdd 203 SUPERFAMILY SSF140478 25 181 3.4E-52 T 22-04-2016 IPR023353 LemA-like domain NHAM_RS17465 9d2e2d0b6059e25850af48a8a16c9cdd 203 PANTHER PTHR34478 1 197 5.1E-92 T 22-04-2016 NHAM_RS17465 9d2e2d0b6059e25850af48a8a16c9cdd 203 Pfam PF04011 LemA family 7 194 1.7E-62 T 22-04-2016 IPR007156 LemA NHAM_RS09350 0fda4294c342a155c193518a09cfc33a 234 Pfam PF10691 Protein of unknown function (DUF2497) 165 231 5.1E-26 T 22-04-2016 IPR019632 Protein of unknown function DUF2497 NHAM_RS16610 09f536808a5d4329565ed524b0316bd1 156 PIRSF PIRSF029256 1 151 4.6E-54 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 NHAM_RS16610 09f536808a5d4329565ed524b0316bd1 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 1 150 30.266 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 NHAM_RS16610 09f536808a5d4329565ed524b0316bd1 156 PANTHER PTHR12029:SF31 1 148 3.1E-55 T 22-04-2016 NHAM_RS16610 09f536808a5d4329565ed524b0316bd1 156 SUPERFAMILY SSF75217 2 147 1.24E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases NHAM_RS16610 09f536808a5d4329565ed524b0316bd1 156 Pfam PF00588 SpoU rRNA Methylase family 2 139 1.2E-30 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 NHAM_RS16610 09f536808a5d4329565ed524b0316bd1 156 Gene3D G3DSA:3.40.1280.10 2 148 4.1E-49 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NHAM_RS16610 09f536808a5d4329565ed524b0316bd1 156 PANTHER PTHR12029 1 148 3.1E-55 T 22-04-2016 NHAM_RS06070 faddbba5d268d1c07ef8712401b41bfb 125 SUPERFAMILY SSF46689 1 110 8.96E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS06070 faddbba5d268d1c07ef8712401b41bfb 125 Gene3D G3DSA:1.10.10.10 3 53 5.1E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain NHAM_RS15710 6235927f9b6d07c57705f778e79d1075 181 SUPERFAMILY SSF46689 20 139 1.15E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS15710 6235927f9b6d07c57705f778e79d1075 181 Pfam PF13551 Winged helix-turn helix 29 89 3.2E-9 T 22-04-2016 NHAM_RS15710 6235927f9b6d07c57705f778e79d1075 181 Pfam PF13592 Winged helix-turn helix 106 163 2.7E-15 T 22-04-2016 IPR025959 Winged helix-turn helix domain NHAM_RS16305 f3add330a6b301d6bf12c5801ee13444 83 Pfam PF13773 Domain of unknown function (DUF4170) 8 75 9.2E-40 T 22-04-2016 IPR025226 Protein of unknown function DUF4170 NHAM_RS20600 714173003899a969a0215396276ee44b 168 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 84 94 - T 22-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 NHAM_RS20600 714173003899a969a0215396276ee44b 168 SUPERFAMILY SSF52799 54 136 5.94E-13 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like NHAM_RS20600 714173003899a969a0215396276ee44b 168 Gene3D G3DSA:3.90.190.10 11 128 2.3E-10 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like NHAM_RS20600 714173003899a969a0215396276ee44b 168 Pfam PF00102 Protein-tyrosine phosphatase 62 107 1.5E-4 T 22-04-2016 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 NHAM_RS02780 12d2ea4560054e4f0bab301495839f53 169 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 82 168 6.2E-33 T 22-04-2016 IPR012997 Rare lipoprotein A NHAM_RS02780 12d2ea4560054e4f0bab301495839f53 169 PANTHER PTHR34183:SF2 31 169 8.7E-46 T 22-04-2016 NHAM_RS02780 12d2ea4560054e4f0bab301495839f53 169 SUPERFAMILY SSF50685 82 161 4.88E-11 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NHAM_RS02780 12d2ea4560054e4f0bab301495839f53 169 PANTHER PTHR34183 31 169 8.7E-46 T 22-04-2016 NHAM_RS02780 12d2ea4560054e4f0bab301495839f53 169 Pfam PF03330 Lytic transglycolase 81 164 3.1E-25 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain NHAM_RS07195 f542c35acb2037f680ba2950c02b203a 422 Pfam PF03237 Terminase-like family 38 407 1.3E-48 T 22-04-2016 IPR004921 Terminase, large subunit NHAM_RS01345 ed3c709b243802c79bcc651cc0796cb8 185 Hamap MF_01398 ATP synthase subunit b [atpF]. 28 183 9.462 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 NHAM_RS01345 ed3c709b243802c79bcc651cc0796cb8 185 Pfam PF00430 ATP synthase B/B' CF(0) 38 165 6.8E-18 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 NHAM_RS01095 78331f60f063e551b2397b9fdddd94bb 134 TIGRFAM TIGR00494 crcB: protein CrcB 15 130 4.3E-25 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 NHAM_RS01095 78331f60f063e551b2397b9fdddd94bb 134 PANTHER PTHR28259 13 132 4.6E-36 T 22-04-2016 NHAM_RS01095 78331f60f063e551b2397b9fdddd94bb 134 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 16 127 3.0E-22 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 NHAM_RS01095 78331f60f063e551b2397b9fdddd94bb 134 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 14 132 19.262 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 NHAM_RS06730 b0d93b8f2a08362b931638dfefcd24ae 125 SUPERFAMILY SSF47226 22 122 7.07E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NHAM_RS06730 b0d93b8f2a08362b931638dfefcd24ae 125 Gene3D G3DSA:1.20.120.160 15 123 1.5E-25 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NHAM_RS06730 b0d93b8f2a08362b931638dfefcd24ae 125 Pfam PF01627 Hpt domain 43 110 1.3E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NHAM_RS03780 ccf7b574187e5d561b571527c2dfccd1 127 PANTHER PTHR30558:SF3 2 125 1.8E-18 T 22-04-2016 NHAM_RS03780 ccf7b574187e5d561b571527c2dfccd1 127 PANTHER PTHR30558 2 125 1.8E-18 T 22-04-2016 NHAM_RS03780 ccf7b574187e5d561b571527c2dfccd1 127 Pfam PF02472 Biopolymer transport protein ExbD/TolR 5 124 1.1E-18 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NHAM_RS12205 f858518f24713fb005e399a00b0fa800 538 Pfam PF05136 Phage portal protein, lambda family 40 404 8.0E-80 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 NHAM_RS19210 26cb88411882672f17b2412b59f057bd 234 Pfam PF06242 Protein of unknown function (DUF1013) 35 173 9.4E-65 T 22-04-2016 IPR010421 Protein of unknown function DUF1013 NHAM_RS02030 1953b480a888090d4a231876b6f94c50 422 PANTHER PTHR13696 99 410 1.2E-125 T 22-04-2016 NHAM_RS02030 1953b480a888090d4a231876b6f94c50 422 Pfam PF13614 AAA domain 159 322 6.6E-9 T 22-04-2016 IPR025669 AAA domain NHAM_RS02030 1953b480a888090d4a231876b6f94c50 422 Gene3D G3DSA:3.40.50.300 158 399 2.3E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02030 1953b480a888090d4a231876b6f94c50 422 PANTHER PTHR13696:SF68 99 410 1.2E-125 T 22-04-2016 NHAM_RS02030 1953b480a888090d4a231876b6f94c50 422 SUPERFAMILY SSF52540 159 401 2.75E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS17455 2cc6d8e8ac51500e1bde7dfa67af9e5b 165 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 21 142 6.0E-15 T 22-04-2016 IPR007621 TPM domain NHAM_RS17455 2cc6d8e8ac51500e1bde7dfa67af9e5b 165 PANTHER PTHR30373 13 165 3.8E-70 T 22-04-2016 NHAM_RS17455 2cc6d8e8ac51500e1bde7dfa67af9e5b 165 PANTHER PTHR30373:SF3 13 165 3.8E-70 T 22-04-2016 NHAM_RS04150 fadbe5a34a177d4cf5dd7326259c3485 466 Pfam PF03237 Terminase-like family 144 451 2.6E-25 T 22-04-2016 IPR004921 Terminase, large subunit NHAM_RS04150 fadbe5a34a177d4cf5dd7326259c3485 466 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 327 451 1.6E-19 T 22-04-2016 IPR006517 Archaeophage PsiM2, terminase large subunit NHAM_RS10600 5db61d224ed9b6284a0a1f87a7ae801c 172 Pfam PF07886 BA14K-like protein 144 172 1.8E-14 T 22-04-2016 IPR012413 BA14k family GO:0009405 NHAM_RS05995 1289d8504e99e854f498a708516a8a46 182 Pfam PF13551 Winged helix-turn helix 30 90 1.1E-10 T 22-04-2016 NHAM_RS05995 1289d8504e99e854f498a708516a8a46 182 SUPERFAMILY SSF46689 21 140 3.58E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS05995 1289d8504e99e854f498a708516a8a46 182 Pfam PF13592 Winged helix-turn helix 107 164 1.7E-16 T 22-04-2016 IPR025959 Winged helix-turn helix domain NHAM_RS03265 1e665e4fccc5ddceb43f04950bf2786e 75 Pfam PF11534 Hexameric tyrosine-coordinated heme protein (HTHP) 4 75 2.7E-37 T 22-04-2016 IPR021111 Hexameric tyrosine-coordinated heme protein (HTHP) NHAM_RS02425 d5c7ec5d3dfc2367461e883a9bc2b380 240 Pfam PF13763 Domain of unknown function (DUF4167) 12 90 6.7E-32 T 22-04-2016 IPR025430 Domain of unknown function DUF4167 NHAM_RS13875 cb5e3475192acc96fc5f922e2b06331e 595 Gene3D G3DSA:1.10.760.10 575 595 8.6E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS13875 cb5e3475192acc96fc5f922e2b06331e 595 Gene3D G3DSA:1.10.760.10 461 529 8.6E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS13875 cb5e3475192acc96fc5f922e2b06331e 595 Gene3D G3DSA:1.10.760.10 326 371 8.6E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS13875 cb5e3475192acc96fc5f922e2b06331e 595 SUPERFAMILY SSF46626 486 530 9.62E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS13875 cb5e3475192acc96fc5f922e2b06331e 595 SUPERFAMILY SSF46626 576 595 9.62E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS13875 cb5e3475192acc96fc5f922e2b06331e 595 SUPERFAMILY SSF46626 316 383 9.62E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS15290 41c54efb796b4f4658091abfe1b9b12b 868 SUPERFAMILY SSF51126 323 474 5.03E-12 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS15290 41c54efb796b4f4658091abfe1b9b12b 868 SUPERFAMILY SSF51126 511 666 5.03E-12 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor NHAM_RS15290 41c54efb796b4f4658091abfe1b9b12b 868 SMART SM00710 650 680 840.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15290 41c54efb796b4f4658091abfe1b9b12b 868 SMART SM00710 540 563 1200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15290 41c54efb796b4f4658091abfe1b9b12b 868 SMART SM00710 708 730 3800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15290 41c54efb796b4f4658091abfe1b9b12b 868 SMART SM00710 585 607 210.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS15290 41c54efb796b4f4658091abfe1b9b12b 868 SMART SM00710 686 707 250.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat NHAM_RS04135 ec2bd1cffadd4e9d8533552a6a981576 126 Pfam PF11994 Protein of unknown function (DUF3489) 57 120 1.6E-27 T 22-04-2016 IPR021880 Protein of unknown function DUF3489 NHAM_RS15770 715ad94e6f294d761739e10904cafdbd 262 PANTHER PTHR30007:SF0 10 258 1.8E-78 T 22-04-2016 NHAM_RS15770 715ad94e6f294d761739e10904cafdbd 262 Pfam PF01609 Transposase DDE domain 103 252 5.7E-26 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 NHAM_RS15770 715ad94e6f294d761739e10904cafdbd 262 PANTHER PTHR30007 10 258 1.8E-78 T 22-04-2016 NHAM_RS15770 715ad94e6f294d761739e10904cafdbd 262 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 15 85 1.1E-19 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family NHAM_RS12765 1ae7a8f5e9395a857781edeb9ed416cc 185 Pfam PF16694 Cytochrome P460 44 180 5.5E-34 T 22-04-2016 IPR032033 Cytochrome P460 NHAM_RS03380 bb4a1a61b706fb77437ef5b3852c8b1c 136 Pfam PF11750 Protein of unknown function (DUF3307) 21 123 9.4E-12 T 22-04-2016 IPR021737 Bacteriophage phiKZ, Orf197 NHAM_RS04910 0606f6e5381501f40f45ab304545ec0f 361 SUPERFAMILY SSF51679 45 354 1.57E-60 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NHAM_RS04910 0606f6e5381501f40f45ab304545ec0f 361 PANTHER PTHR30137 46 358 8.5E-39 T 22-04-2016 NHAM_RS04910 0606f6e5381501f40f45ab304545ec0f 361 Pfam PF00296 Luciferase-like monooxygenase 42 316 1.2E-42 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NHAM_RS04910 0606f6e5381501f40f45ab304545ec0f 361 Gene3D G3DSA:3.20.20.30 45 353 3.7E-65 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NHAM_RS23985 1baaf90eb38f640e8aacd931e4012f88 313 Pfam PF10123 Mu-like prophage I protein 13 178 5.4E-47 T 22-04-2016 IPR012106 Protease, Mu phage/prophage I type NHAM_RS23985 1baaf90eb38f640e8aacd931e4012f88 313 Pfam PF10123 Mu-like prophage I protein 151 300 6.5E-16 T 22-04-2016 IPR012106 Protease, Mu phage/prophage I type NHAM_RS20685 c8c72efe3a98c82f8ff97028823d6a13 95 Pfam PF05988 Bacterial protein of unknown function (DUF899) 26 64 1.3E-4 T 22-04-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like NHAM_RS02060 80a06e2cc59137c3554a14c738e5201d 56 Pfam PF04964 Flp/Fap pilin component 8 52 1.4E-19 T 22-04-2016 IPR007047 Flp/Fap pilin component NHAM_RS01370 7c1ae18bd8b6a7eaf286d9d6ba3d6a71 138 Pfam PF07886 BA14K-like protein 111 138 9.0E-14 T 22-04-2016 IPR012413 BA14k family GO:0009405 NHAM_RS15470 dd09c4c6757d5dcd3aad97f3c4fdcf96 77 Pfam PF13313 Domain of unknown function (DUF4082) 4 66 7.7E-14 T 22-04-2016 IPR025141 Domain of unknown function DUF4082 NHAM_RS18650 5958b4ca6104bf551b8daad5fea8595e 266 Pfam PF10670 Domain of unknown function (DUF4198) 21 246 5.3E-66 T 22-04-2016 IPR019613 Protein of unknown function DUF4198 NHAM_RS03670 4c3dc59609a0c2b29f773961411395d1 122 SUPERFAMILY SSF54427 10 118 5.65E-26 T 22-04-2016 IPR032710 NTF2-like domain NHAM_RS03670 4c3dc59609a0c2b29f773961411395d1 122 Gene3D G3DSA:3.10.450.50 27 120 1.6E-9 T 22-04-2016 IPR032710 NTF2-like domain NHAM_RS03670 4c3dc59609a0c2b29f773961411395d1 122 Pfam PF12680 SnoaL-like domain 23 112 7.5E-12 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain NHAM_RS05795 e5d7a8aca64a8c8cb8259d758df76a0e 73 Pfam PF13358 DDE superfamily endonuclease 5 45 3.5E-11 T 22-04-2016 NHAM_RS10635 77e1c48c70c378a759c5d74056a6d616 618 Pfam PF06527 TniQ 7 141 2.1E-19 T 22-04-2016 IPR009492 TniQ NHAM_RS13250 79890e09d69c36456432409e2916bbc8 208 Gene3D G3DSA:3.40.10.10 70 100 6.2E-4 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 NHAM_RS17050 807ec4c0e06a2416ecee61cd27f92a44 98 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 7 80 1.8E-14 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative NHAM_RS17875 7de4b2ad2fe73115ecbd804044f22962 65 Pfam PF04588 Hypoxia induced protein conserved region 8 56 8.3E-13 T 22-04-2016 IPR007667 Hypoxia induced protein, domain NHAM_RS10960 e979dbc9ddf200d091d5f4e146fd7dc0 490 Pfam PF03354 Phage Terminase 33 179 3.5E-9 T 22-04-2016 IPR005021 Phage terminase NHAM_RS22335 85bc4b62f1eb8e571fe388395ac8282a 228 PANTHER PTHR38686 1 228 4.2E-14 T 22-04-2016 NHAM_RS17940 9a669579d77a699d48ae52dd8cbe514d 84 Pfam PF07769 psiF repeat 54 76 3.7E-7 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat NHAM_RS08220 a36b007c1d8cc983a0198b16031f73df 298 Pfam PF10124 Mu-like prophage major head subunit gpT 8 297 4.9E-126 T 22-04-2016 IPR018774 Bacteriophage Mu, GpT NHAM_RS12105 1e428c6e9e449ac8306bb1b79552626f 141 Pfam PF06995 Phage P2 GpU 8 126 2.0E-31 T 22-04-2016 IPR009734 Myoviridae, GpU NHAM_RS23980 449d818af6743f226248d2a3cc107d91 76 Pfam PF12762 ISXO2-like transposase domain 2 54 7.2E-19 T 22-04-2016 IPR024445 ISXO2-like transposase domain NHAM_RS13560 587de7a62becaeac67019d7cd256447c 356 Pfam PF03824 High-affinity nickel-transport protein 15 344 6.1E-37 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 NHAM_RS16435 08f76a84dd6285c4d392f0686a03fc04 83 Pfam PF11295 Protein of unknown function (DUF3096) 42 76 3.8E-17 T 22-04-2016 IPR021446 Protein of unknown function DUF3096 NHAM_RS17125 83aef0342201773009114827e5048ff7 565 Pfam PF05876 Phage terminase large subunit (GpA) 33 564 5.5E-176 T 22-04-2016 IPR008866 Bacteriophage lambda, GpA NHAM_RS00615 c556a94e846171d273a3143ec57cb7c6 171 Pfam PF10947 Protein of unknown function (DUF2628) 18 100 1.4E-27 T 22-04-2016 IPR024399 Protein of unknown function DUF2628 NHAM_RS17150 25ef3b6cd445963acefd06839afddb62 154 Pfam PF04120 Low affinity iron permease 19 141 1.2E-53 T 22-04-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 NHAM_RS23530 30c031dee4ce7e360535f614f973823f 130 Pfam PF00290 Tryptophan synthase alpha chain 57 129 7.5E-28 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS23530 30c031dee4ce7e360535f614f973823f 130 Gene3D G3DSA:3.20.20.70 51 129 9.9E-31 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 NHAM_RS23530 30c031dee4ce7e360535f614f973823f 130 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 97 110 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 NHAM_RS23530 30c031dee4ce7e360535f614f973823f 130 SUPERFAMILY SSF51366 51 129 1.79E-28 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NHAM_RS09540 5ec15657c771069569f9b7c1abbb66e5 51 SUPERFAMILY SSF46689 1 47 2.93E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 NHAM_RS20190 ed63b50f03d544228d1eeba6275691ed 84 Pfam PF13358 DDE superfamily endonuclease 1 54 5.0E-13 T 22-04-2016 NHAM_RS16665 0d3baa60f99443ad5c14fa30fe2a9988 937 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 6 85 1.2E-22 T 22-04-2016 IPR011933 Double transmembrane domain NHAM_RS16665 0d3baa60f99443ad5c14fa30fe2a9988 937 Pfam PF07584 Aerotolerance regulator N-terminal 7 80 8.7E-18 T 22-04-2016 IPR024163 Aerotolerance regulator, N-terminal NHAM_RS16665 0d3baa60f99443ad5c14fa30fe2a9988 937 Pfam PF13709 Domain of unknown function (DUF4159) 696 917 1.8E-54 T 22-04-2016 IPR025297 Domain of unknown function DUF4159 NHAM_RS16665 0d3baa60f99443ad5c14fa30fe2a9988 937 SUPERFAMILY SSF52317 367 521 5.49E-7 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like NHAM_RS20615 411bce17dda613a1a737802739a7d7af 391 Pfam PF12358 Protein of unknown function (DUF3644) 117 190 1.1E-25 T 22-04-2016 IPR022104 Protein of unknown function DUF3644 NHAM_RS11205 2bfe03122df04452a9b428c3b91efc8a 124 Pfam PF11162 Protein of unknown function (DUF2946) 11 121 4.6E-9 T 22-04-2016 IPR021333 Protein of unknown function DUF2946 NHAM_RS10690 e64734a48f261575b168044753e4d80b 224 Pfam PF09929 Putative PD-(D/E)XK phosphodiesterase (DUF2161) 100 209 2.3E-37 T 22-04-2016 IPR018679 Putative PD-(D/E)XK phosphodiesterase (DUF2161) NHAM_RS14270 eb016957fe69010ad974cbf3a040022c 256 PANTHER PTHR35004 1 204 2.8E-51 T 22-04-2016 NHAM_RS14270 eb016957fe69010ad974cbf3a040022c 256 PANTHER PTHR35004:SF2 1 204 2.8E-51 T 22-04-2016 NHAM_RS13465 bfdceb399ee3a641365cdca0b6e6d701 431 Pfam PF09594 Protein of unknown function (DUF2029) 69 337 3.1E-44 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 NHAM_RS17405 e23715ce5cf1a902d48d28cc224a899c 348 Pfam PF05128 Domain of unknown function (DUF697) 187 345 4.4E-48 T 22-04-2016 IPR021147 Protein of unknown function DUF697 NHAM_RS17405 e23715ce5cf1a902d48d28cc224a899c 348 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 77 341 4.4E-69 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 NHAM_RS17405 e23715ce5cf1a902d48d28cc224a899c 348 PANTHER PTHR39342:SF1 2 346 7.7E-97 T 22-04-2016 NHAM_RS17405 e23715ce5cf1a902d48d28cc224a899c 348 PANTHER PTHR39342 2 346 7.7E-97 T 22-04-2016 NHAM_RS11705 d055c4c6d680adc6f094080c1e4628d1 334 PANTHER PTHR36844 1 334 1.4E-44 T 22-04-2016 NHAM_RS11705 d055c4c6d680adc6f094080c1e4628d1 334 Pfam PF13367 Protease prsW family 35 210 5.0E-25 T 22-04-2016 IPR026898 Protease PrsW GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- NHAM_RS19475 14167ca6abaae4be319bd71bb4738ec6 103 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 7 95 2.1E-14 T 22-04-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein NHAM_RS06065 b8c4610c026d2be830ce6cd752800e3e 176 Pfam PF13358 DDE superfamily endonuclease 7 148 1.6E-35 T 22-04-2016 NHAM_RS06065 b8c4610c026d2be830ce6cd752800e3e 176 PANTHER PTHR23022 1 168 2.8E-17 T 22-04-2016 NHAM_RS18615 2445a079e03f33afc15bf4fed7fa8c6c 125 PIRSF PIRSF031804 1 124 2.1E-48 T 22-04-2016 IPR016983 Uncharacterised conserved protein UCP031804 NHAM_RS18615 2445a079e03f33afc15bf4fed7fa8c6c 125 PANTHER PTHR22894 1 121 1.8E-24 T 22-04-2016 NHAM_RS18615 2445a079e03f33afc15bf4fed7fa8c6c 125 Pfam PF06803 Protein of unknown function (DUF1232) 63 94 2.0E-13 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 NHAM_RS05880 07260be413a7b2ae7f2b07ace489b2cb 324 Pfam PF08878 Domain of unknown function (DUF1837) 55 305 7.0E-56 T 22-04-2016 IPR014976 Protein of unknown function DUF1837 NHAM_RS19315 c556c68e999a833972a74814d6ecb5e7 506 Pfam PF00817 impB/mucB/samB family 30 152 3.0E-9 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NHAM_RS19315 c556c68e999a833972a74814d6ecb5e7 506 SUPERFAMILY SSF56672 29 234 3.56E-38 T 22-04-2016 NHAM_RS19315 c556c68e999a833972a74814d6ecb5e7 506 PANTHER PTHR35369:SF2 3 501 2.9E-77 T 22-04-2016 NHAM_RS19315 c556c68e999a833972a74814d6ecb5e7 506 PANTHER PTHR35369 3 501 2.9E-77 T 22-04-2016 NHAM_RS02355 3a93e8a7724e922bb5c64ee1b6bd1721 348 Pfam PF01757 Acyltransferase family 15 316 6.6E-29 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 NHAM_RS03495 e68ba0f236b395d4b6d5cc03262e98ab 396 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 34 393 4.2E-98 T 22-04-2016 IPR018666 Protein of unknown function DUF2125 NHAM_RS04380 2662525d7322257847bf2496dca0cd80 124 Pfam PF13358 DDE superfamily endonuclease 14 97 1.1E-12 T 22-04-2016 NHAM_RS04170 2662525d7322257847bf2496dca0cd80 124 Pfam PF13358 DDE superfamily endonuclease 14 97 1.1E-12 T 22-04-2016 NHAM_RS18035 910a7a5dce5216960c9ec590ae13e9f5 151 Pfam PF02472 Biopolymer transport protein ExbD/TolR 22 146 2.2E-27 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NHAM_RS18035 910a7a5dce5216960c9ec590ae13e9f5 151 PANTHER PTHR30558 15 150 2.7E-36 T 22-04-2016 NHAM_RS18035 910a7a5dce5216960c9ec590ae13e9f5 151 PANTHER PTHR30558:SF3 15 150 2.7E-36 T 22-04-2016 NHAM_RS10120 b5534dd9a40e376356cb83bea6554099 403 Pfam PF08808 RES domain 204 387 1.0E-20 T 22-04-2016 IPR014914 RES domain NHAM_RS10120 b5534dd9a40e376356cb83bea6554099 403 SMART SM00953 223 377 2.1E-25 T 22-04-2016 IPR014914 RES domain NHAM_RS07255 ebf0840b122a800a48b8310d90995d6e 106 Pfam PF11836 Phage tail tube protein, GTA-gp10 6 101 2.9E-28 T 22-04-2016 IPR021791 Phage tail tube protein, GTA-gp10 NHAM_RS13570 383545483ebe44d55f4a5520d9cca14e 175 TIGRFAM TIGR03809 TIGR03809: TIGR03809 family protein 18 172 3.1E-57 T 22-04-2016 IPR022268 Conserved hypothetical protein CHP03809 NHAM_RS14360 52cc439287ca549d11428265bce7048d 167 Gene3D G3DSA:3.40.50.10540 15 80 1.8E-12 T 22-04-2016 IPR023606 CoA-transferase family III domain NHAM_RS14360 52cc439287ca549d11428265bce7048d 167 SUPERFAMILY SSF89796 15 80 5.49E-13 T 22-04-2016 IPR023606 CoA-transferase family III domain NHAM_RS14360 52cc439287ca549d11428265bce7048d 167 Pfam PF02515 CoA-transferase family III 15 80 5.7E-12 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 NHAM_RS23990 e44cd93045c05549c2f6f8a11b921443 174 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 19 81 5.1E-12 T 22-04-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 NHAM_RS19540 e5c28660225597c591aac15794b002bb 124 Pfam PF07886 BA14K-like protein 96 123 8.2E-14 T 22-04-2016 IPR012413 BA14k family GO:0009405 NHAM_RS24065 581fbe79701e5a85d900a9e75278d651 307 SUPERFAMILY SSF53448 19 215 5.4E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS24065 581fbe79701e5a85d900a9e75278d651 307 Gene3D G3DSA:3.90.550.10 53 212 3.1E-16 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS07300 7a7f47c94855b9d91b627bddc42d023d 220 Gene3D G3DSA:3.30.20.10 125 163 1.5E-6 T 22-04-2016 NHAM_RS07300 7a7f47c94855b9d91b627bddc42d023d 220 PANTHER PTHR34408 25 76 1.5E-21 T 22-04-2016 NHAM_RS07300 7a7f47c94855b9d91b627bddc42d023d 220 PANTHER PTHR34408 103 219 1.5E-21 T 22-04-2016 NHAM_RS07300 7a7f47c94855b9d91b627bddc42d023d 220 SUPERFAMILY SSF53955 15 218 4.5E-36 T 22-04-2016 IPR023346 Lysozyme-like domain NHAM_RS14810 2650df6278e74289bad314ca21f7a2c2 518 Pfam PF14356 Domain of unknown function (DUF4403) 53 512 1.3E-118 T 22-04-2016 IPR025515 Protein of unknown function DUF4403 NHAM_RS15370 e276ffdb2738f49e6daee876f9fba136 84 Gene3D G3DSA:3.30.420.10 12 70 1.1E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 NHAM_RS07270 33c81b4aa0a853792aa1caf2d6bf1352 213 Pfam PF09343 Conserved hypothetical protein 2217 (DUF2460) 6 212 2.5E-79 T 22-04-2016 IPR011740 Protein of unknown function DUF2460 NHAM_RS07270 33c81b4aa0a853792aa1caf2d6bf1352 213 TIGRFAM TIGR02217 chp_TIGR02217: TIGR02217 family protein 3 212 1.6E-92 T 22-04-2016 IPR011740 Protein of unknown function DUF2460 NHAM_RS12725 df706e7d9f7620c818770ee1b5ecd11d 108 Pfam PF11836 Phage tail tube protein, GTA-gp10 3 98 3.1E-27 T 22-04-2016 IPR021791 Phage tail tube protein, GTA-gp10 NHAM_RS15885 2b6573b0cff88ba66c563ce43e1d296e 85 Pfam PF04380 Membrane fusogenic activity 4 79 1.2E-24 T 22-04-2016 IPR007475 Membrane fusogenic activity NHAM_RS07010 b02aee8b425c44303c0bfca0b99b3f7c 269 Pfam PF06114 Domain of unknown function (DUF955) 31 154 1.6E-12 T 22-04-2016 IPR010359 HTH domain, IrrE-type NHAM_RS02120 4043c39c43f841765b4e3354b0c1eed5 123 Pfam PF10984 Protein of unknown function (DUF2794) 29 113 8.0E-40 T 22-04-2016 IPR021252 Protein of unknown function DUF2794 NHAM_RS24120 64e058862410c35df2ef83cc7be4445d 175 Pfam PF04717 Type VI secretion system, phage-baseplate injector 17 111 2.0E-16 T 22-04-2016 IPR006531 Gp5 N-terminal NHAM_RS15735 07ebb6a483facf7585915f67535dea22 80 Pfam PF13586 Transposase DDE domain 13 60 1.5E-9 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS12095 712d0f08096c1cc36337a872a75bdcbe 356 Pfam PF05954 Phage late control gene D protein (GPD) 86 316 1.9E-13 T 22-04-2016 NHAM_RS12095 712d0f08096c1cc36337a872a75bdcbe 356 SUPERFAMILY SSF69279 5 176 5.95E-23 T 22-04-2016 NHAM_RS23965 3a10c6dc6d22949f58068b101a1439d6 80 Pfam PF13751 Transposase DDE domain 20 72 2.8E-9 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS01540 a8db0504ddc38b7915c775ea4900946e 162 SUPERFAMILY SSF54060 10 92 7.42E-21 T 22-04-2016 NHAM_RS01540 a8db0504ddc38b7915c775ea4900946e 162 Pfam PF13392 HNH endonuclease 42 85 1.5E-20 T 22-04-2016 IPR003615 HNH nuclease NHAM_RS03095 53a77e3aa401c8f3220c3da402fe9f50 117 Gene3D G3DSA:1.10.357.10 25 98 3.8E-6 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NHAM_RS20490 deeaca8ce09746052a082e38952b02dd 115 Pfam PF11345 Protein of unknown function (DUF3147) 5 105 2.5E-6 T 22-04-2016 IPR021493 Protein of unknown function DUF3147 NHAM_RS18985 4524fbc706ce33f2d4061f1a740e4757 128 Pfam PF04241 Protein of unknown function (DUF423) 25 105 1.9E-8 T 22-04-2016 IPR006696 Protein of unknown function DUF423 NHAM_RS18855 221eb3b4b4c16e02350d446e5e03d035 112 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 36 112 2.5E-26 T 22-04-2016 IPR030999 Sulfur oxidation c-type cytochrome SoxX NHAM_RS18855 221eb3b4b4c16e02350d446e5e03d035 112 SUPERFAMILY SSF46626 4 112 4.17E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS18855 221eb3b4b4c16e02350d446e5e03d035 112 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 37 109 4.0E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS18855 221eb3b4b4c16e02350d446e5e03d035 112 Gene3D G3DSA:1.10.760.10 6 112 5.3E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS01280 6a84b4c89c395d3426da41a98b0b57ed 172 Pfam PF06776 Invasion associated locus B (IalB) protein 38 171 2.8E-39 T 22-04-2016 IPR010642 Invasion protein B NHAM_RS17840 848010fc99a7d21485af690b5d9249ee 135 Pfam PF13627 Prokaryotic lipoprotein-attachment site 57 79 3.4E-8 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site NHAM_RS01050 d71ee3dc6dcddd75d6e082830224012e 219 Pfam PF13632 Glycosyl transferase family group 2 1 106 8.5E-11 T 22-04-2016 IPR001173 Glycosyltransferase 2-like NHAM_RS01050 d71ee3dc6dcddd75d6e082830224012e 219 SUPERFAMILY SSF53448 1 68 3.15E-8 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases NHAM_RS08805 c3092aa21a9a5aa0782cfc293172a44c 138 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 23 134 6.7E-23 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family NHAM_RS08805 c3092aa21a9a5aa0782cfc293172a44c 138 Pfam PF05119 Phage terminase, small subunit 32 126 1.4E-23 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family NHAM_RS12350 151c088c80165ef3aaef393de9c5cc9f 112 Pfam PF09361 Phasin protein 5 102 1.3E-24 T 22-04-2016 IPR018968 Phasin NHAM_RS00335 3004a83689961982a0b902f3b406ec7c 246 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 6 217 9.2E-26 T 22-04-2016 NHAM_RS20350 62124348d6046a8cd3a7968630a8d606 87 Gene3D G3DSA:3.40.630.10 1 45 5.9E-5 T 22-04-2016 NHAM_RS05635 511efe10563dd05833aacf22e5ab10c7 186 Pfam PF06186 Protein of unknown function (DUF992) 15 156 9.9E-54 T 22-04-2016 IPR009333 Protein of unknown function DUF992 NHAM_RS24205 5e51a634385cc37f2fa0b308239fa0fc 190 Pfam PF06210 Protein of unknown function (DUF1003) 47 129 2.8E-18 T 22-04-2016 IPR010406 Protein of unknown function DUF1003 NHAM_RS13265 4daa528ef06cd3d76c2dc9039926b12e 99 Pfam PF06233 Usg-like family 19 98 4.4E-37 T 22-04-2016 IPR009354 Usg-like UniPathway: UPA00035 NHAM_RS17725 ae6ad05510676f868403b6dfcc4f1121 64 Pfam PF06348 Protein of unknown function (DUF1059) 4 59 2.6E-16 T 22-04-2016 IPR009409 Protein of unknown function DUF1059 NHAM_RS03355 ac0f64e8cb22641ebc0a9e3fbfc1b400 393 Pfam PF05940 NnrS protein 15 392 7.6E-112 T 22-04-2016 IPR010266 NnrS NHAM_RS24170 0262e7501b947d39d3f9e73590640239 76 SUPERFAMILY SSF56091 25 70 1.44E-8 T 22-04-2016 NHAM_RS24170 0262e7501b947d39d3f9e73590640239 76 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 60 68 - T 22-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 NHAM_RS20495 c299a698ef6e2242b53fd053e5e4f6c5 144 Pfam PF11345 Protein of unknown function (DUF3147) 20 134 1.1E-5 T 22-04-2016 IPR021493 Protein of unknown function DUF3147 NHAM_RS19045 dfaf7a5e6e48de6ede99a79b6771869a 262 SUPERFAMILY SSF101967 138 251 2.09E-8 T 22-04-2016 NHAM_RS06915 6937bb3be905ab9e3329418139561f08 193 Pfam PF12635 Protein of unknown function (DUF3780) 4 187 7.6E-76 T 22-04-2016 IPR024220 Protein of unknown function DUF3780 NHAM_RS05965 b84e06d5823f6c840bf1e7a1b8835bdd 66 Gene3D G3DSA:2.40.50.140 27 64 6.9E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold NHAM_RS04725 8cb2ed6180d9c471160b9a7692d07432 121 SUPERFAMILY SSF46626 46 110 1.06E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 NHAM_RS03050 d1ff18fac1353b3296cb60313cdb9767 1034 Pfam PF07603 Protein of unknown function (DUF1566) 908 1033 2.7E-17 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 NHAM_RS00025 4e25615eb7d63075014ec7bc822a1cd2 376 Pfam PF04632 Fusaric acid resistance protein family 22 223 2.9E-16 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 NHAM_RS00025 4e25615eb7d63075014ec7bc822a1cd2 376 PANTHER PTHR30509 11 361 1.4E-20 T 22-04-2016 NHAM_RS07245 878717fb6b8385334a65125f305aa1a0 136 Pfam PF11367 Protein of unknown function (DUF3168) 11 128 1.1E-31 T 22-04-2016 IPR021508 Protein of unknown function DUF3168 NHAM_RS05485 81482fa47e05ab9aa1d6d2644a211141 438 Pfam PF11902 Protein of unknown function (DUF3422) 17 433 8.5E-163 T 22-04-2016 IPR021830 Protein of unknown function DUF3422 NHAM_RS02295 d00b46209c72a01c675ea2df2cc9e6cd 168 SUPERFAMILY SSF53795 7 112 1.59E-18 T 22-04-2016 NHAM_RS02295 d00b46209c72a01c675ea2df2cc9e6cd 168 Gene3D G3DSA:3.40.50.300 8 144 7.2E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase NHAM_RS02295 d00b46209c72a01c675ea2df2cc9e6cd 168 Pfam PF07475 HPr Serine kinase C-terminal domain 6 86 5.9E-12 T 22-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 NHAM_RS16185 a722e03f2cb31fdc310cd8636962cf0f 147 Pfam PF07811 TadE-like protein 22 64 1.5E-11 T 22-04-2016 IPR012495 TadE-like NHAM_RS12010 a9dcbcb35b7da98ac8fc099f0f858a3e 115 Gene3D G3DSA:3.30.70.1200 25 91 6.3E-4 T 22-04-2016 NHAM_RS23470 a602026c3228a3c71d874f0e11303d72 69 Gene3D G3DSA:3.30.200.20 17 67 1.1E-13 T 22-04-2016 NHAM_RS09665 d986bc2b747cd8cd240d5dda55d18446 107 Gene3D G3DSA:2.60.120.10 5 105 9.1E-15 T 22-04-2016 IPR014710 RmlC-like jelly roll fold NHAM_RS09665 d986bc2b747cd8cd240d5dda55d18446 107 SUPERFAMILY SSF51182 23 104 1.74E-13 T 22-04-2016 IPR011051 RmlC-like cupin domain NHAM_RS01580 fc0f6d206b6f4d9037e86220c5a103fb 288 PIRSF PIRSF037112 2 288 3.3E-96 T 22-04-2016 IPR017113 Antirestriction, ArdC NHAM_RS01580 fc0f6d206b6f4d9037e86220c5a103fb 288 Pfam PF08401 Domain of unknown function (DUF1738) 6 108 4.1E-32 T 22-04-2016 IPR013610 Domain of unknown function DUF1738 NHAM_RS24030 ba7676fe343ddb75a3c1225a04b362f7 400 Gene3D G3DSA:1.10.443.10 188 388 3.9E-16 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NHAM_RS24030 ba7676fe343ddb75a3c1225a04b362f7 400 SUPERFAMILY SSF56349 96 385 1.5E-18 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NHAM_RS15160 2130600f937a244d36943ca9c17e04e5 497 Pfam PF02530 Porin subfamily 25 489 1.1E-119 T 22-04-2016 IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 NHAM_RS20315 a0f80a0c8b4ee42c2ef1d648223f2a20 115 Pfam PF04986 Putative transposase 1 57 4.5E-18 T 22-04-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 NHAM_RS07005 94dd33a41fc6893d266cfbb9809371b4 140 Gene3D G3DSA:3.40.50.2300 30 138 7.5E-4 T 22-04-2016 NHAM_RS12655 e92b646b26a6e86186505f35b7ba4532 113 Pfam PF11836 Phage tail tube protein, GTA-gp10 8 107 6.2E-29 T 22-04-2016 IPR021791 Phage tail tube protein, GTA-gp10 NHAM_RS10720 b1acaa40e3d7de5f9756142f5f1818c0 183 Pfam PF00186 Dihydrofolate reductase 28 146 8.6E-7 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 NHAM_RS10720 b1acaa40e3d7de5f9756142f5f1818c0 183 Gene3D G3DSA:3.40.430.10 7 158 1.3E-15 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain NHAM_RS10720 b1acaa40e3d7de5f9756142f5f1818c0 183 SUPERFAMILY SSF53597 1 171 3.8E-24 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain NHAM_RS13910 ca132951978f55c82ef3ab1022180e9a 196 Pfam PF07813 LTXXQ motif family protein 45 148 2.5E-6 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 NHAM_RS21345 06e1c5934cbdf325237fa9a58b909b61 75 SUPERFAMILY SSF48208 6 75 6.8E-10 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 NHAM_RS19775 50612e2590a186348c0176b85331a7e4 462 Pfam PF13884 Chaperone of endosialidase 342 390 1.4E-12 T 22-04-2016 IPR030392 Intramolecular chaperone auto-processing domain NHAM_RS00215 d58981bb1e92d757fc2504b9a19307ce 176 Pfam PF06347 Bacterial SH3 domain 47 103 1.1E-22 T 22-04-2016 IPR010466 Protein of unknown function DUF1058 NHAM_RS00215 d58981bb1e92d757fc2504b9a19307ce 176 Pfam PF06347 Bacterial SH3 domain 114 168 1.2E-17 T 22-04-2016 IPR010466 Protein of unknown function DUF1058 NHAM_RS13305 5398b5fd4713a8203e95d9dcbe6667ac 250 Pfam PF17036 Cellulose biosynthesis protein BcsS 101 244 4.3E-56 T 22-04-2016 IPR031485 Cellulose biosynthesis protein BcsS NHAM_RS11210 b940c2dcdc80490da1e4c5f442f2401f 91 Pfam PF07330 Protein of unknown function (DUF1467) 5 83 1.7E-32 T 22-04-2016 IPR009935 Protein of unknown function DUF1467 NHAM_RS02070 edf00e380460c51d221ac7cefe55c37c 189 Pfam PF07811 TadE-like protein 24 66 6.7E-15 T 22-04-2016 IPR012495 TadE-like NHAM_RS03765 30d4b7a2eb1b9d2aec1a4b8c6935f6b2 186 Pfam PF06776 Invasion associated locus B (IalB) protein 43 181 4.7E-33 T 22-04-2016 IPR010642 Invasion protein B NHAM_RS08105 ed2c5a536032499fea1cbb349cbbecf6 198 Pfam PF02620 Uncharacterized ACR, COG1399 70 184 3.4E-9 T 22-04-2016 IPR003772 Protein of unknown function DUF177 NHAM_RS19480 3a45df9c412f14931864b3c4db80330b 72 Pfam PF13701 Transposase DDE domain group 1 3 45 1.4E-8 T 22-04-2016 IPR025668 Transposase DDE domain NHAM_RS09850 8f3411420c43166b6acd4c2d856e3293 151 Pfam PF10116 Protein required for attachment to host cells 9 145 1.7E-42 T 22-04-2016 IPR019291 Host attachment protein NHAM_RS08070 9883598e2241358128eeef0adcef8eee 565 Pfam PF02120 Flagellar hook-length control protein FliK 475 552 8.6E-18 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal NHAM_RS17040 7d0e80687bc527fa3a6df27f9213a41f 141 Pfam PF06995 Phage P2 GpU 8 126 1.3E-30 T 22-04-2016 IPR009734 Myoviridae, GpU NHAM_RS07155 c74c894f88e0de743348337b8050a75d 192 PIRSF PIRSF010244 1 182 2.5E-30 T 22-04-2016 IPR014456 Uncharacterised conserved protein UCP010244, integral membrane protein NHAM_RS05850 1a9f92a9988b176c00550b92b10c6bfe 166 Pfam PF11149 Protein of unknown function (DUF2924) 19 157 5.5E-44 T 22-04-2016 IPR021322 Protein of unknown function DUF2924 NHAM_RS06835 81b22b88ecf8c840672ababba92bb272 121 Pfam PF07309 Flagellar protein FlaF 5 117 6.8E-38 T 22-04-2016 IPR010845 Flagellar FlaF GO:0044781 NHAM_RS17335 8d5e016b5e5db37e57ffc46b0e78db2f 215 Pfam PF10090 Histidine phosphotransferase 33 211 4.6E-65 T 22-04-2016 IPR018762 Histidine phosphotransferase NHAM_RS19650 1f49cc5b27f8dbdac12183c46ae28e9f 86 SUPERFAMILY SSF116734 1 71 3.11E-7 T 22-04-2016 NHAM_RS12560 ffa37e70abfc6ba40308614ce02ff4e3 68 Pfam PF11003 Protein of unknown function (DUF2842) 6 66 1.4E-21 T 22-04-2016 IPR021265 Protein of unknown function DUF2842 NHAM_RS00845 cb32e8381c42a413358cdaa7cf11f82a 88 Pfam PF06620 Protein of unknown function (DUF1150) 14 88 7.6E-33 T 22-04-2016 IPR009531 Protein of unknown function DUF1150 NHAM_RS16685 e11ec3f2313efcbc54a0b29862834dab 143 Pfam PF11162 Protein of unknown function (DUF2946) 13 141 9.4E-7 T 22-04-2016 IPR021333 Protein of unknown function DUF2946 NHAM_RS06965 29b54942734dc1f89fa3dca0b744b82d 186 Pfam PF08722 TnsA endonuclease N terminal 9 85 9.2E-9 T 22-04-2016 IPR014833 TnsA endonuclease, N-terminal NHAM_RS07025 dac6b4f3000a7bad8d3e7a336d16d440 247 Pfam PF05598 Transposase domain (DUF772) 53 125 1.2E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal NHAM_RS08600 51605a53ebfcc8a40f105d5e17e75586 217 Pfam PF09976 Tetratricopeptide repeat-like domain 18 184 3.9E-16 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain