locus strain_id interpro function go others NIDE_RS00005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001957|IPR003593|IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR024633|IPR027417 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|DnaA N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PF11638|PR00051|PS01008|PTHR30050|PTHR30050:SF2|SM00382|SM00760|SSF48295|SSF52540|TIGR00362 NIDE_RS00010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001001|IPR022634|IPR022635|IPR022637 DNA polymerase III, beta chain|DNA polymerase III, beta chain, C-terminal|DNA polymerase III, beta chain, N-terminal|DNA polymerase III, beta chain, central GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|PF00712|PF02767|PF02768|PIRSF000804|PTHR30478|SM00480|SSF55979|TIGR00663 NIDE_RS00015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|PTHR10169|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 NIDE_RS00020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002205|IPR005743|IPR006691|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|PTHR10169|PTHR10169:SF48|SM00434|SSF101904|SSF56719|TIGR01063 NIDE_RS00035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|PTHR30308|PTHR30308:SF2|SSF74982|TIGR00086 NIDE_RS00040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032808 DoxX family PF07681|PTHR33452|PTHR33452:SF3 NIDE_RS00045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|PTHR14194|SSF51735 NIDE_RS00050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003829|IPR008778|IPR011051|IPR012093|IPR014710 Pirin|Pirin, C-terminal domain|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PF05726|PIRSF006232|PTHR13903|PTHR13903:SF12|SSF51182 NIDE_RS00055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001853|IPR012336 DSBA-like thioredoxin domain|Thioredoxin-like fold GO:0015035 G3DSA:3.40.30.10|PF01323|PTHR13887|PTHR13887:SF10|SSF52833 NIDE_RS00060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004360|IPR018146|IPR029068 Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|SSF54593 NIDE_RS00065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR031849 Domain of unknown function DUF5069 PF16798 NIDE_RS00070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005025|IPR017941|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like|Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.40.50.360|PF00355|PF03358|PTHR21496|SSF50022|SSF52218 NIDE_RS00080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004360|IPR018146|IPR029068 Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|PTHR10374|PTHR10374:SF14|SSF54593 NIDE_RS00085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 PF09360|PTHR13680|PTHR13680:SF22|SM00704 NIDE_RS00090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001221|IPR001433|IPR001709|IPR008333|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PR00371|PR00410|PTHR19370|PTHR19370:SF32|SSF52343|SSF63380 NIDE_RS00100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS00105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TIGR01409 NIDE_RS00110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016170|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2|Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.40.462.10|PF01565|PF02913|PTHR11748|PTHR11748:SF92|SSF55103|SSF56176 NIDE_RS00115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF571|SM00829|SSF50129|SSF51735 NIDE_RS00125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|PTHR15020|PTHR15020:SF29|SSF51735 NIDE_RS00130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00411|PTHR22912|SSF51905 NIDE_RS00135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 G3DSA:3.30.460.10|PF01909|SSF81301 NIDE_RS00140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417|IPR029016 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|GAF domain|GAF domain-like|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.40|G3DSA:3.40.50.300|PF00158|PF02954|PF13185|PS00675|PS00676|PS00688|PTHR32071|SM00065|SM00382|SSF46689|SSF52540|SSF55781 NIDE_RS00145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012899 LTXXQ motif family protein GO:0042597 PF07813 NIDE_RS00150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003997|IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain|RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|PR01490|PTHR32347|PTHR32347:SF12|SSF111369 NIDE_RS00155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF0|SM00382|SSF52540 NIDE_RS00160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF12698|PTHR30294|PTHR30294:SF12 NIDE_RS00165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF12698|PTHR30294|PTHR30294:SF12 NIDE_RS00170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032808 DoxX family PF07681|PTHR33452|PTHR33452:SF3 NIDE_RS00175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002645 STAS domain G3DSA:3.30.750.24|SSF52091 NIDE_RS00185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 NIDE_RS00190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025961 Heavy-metal resistance protein PF13801 NIDE_RS00200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006439|IPR010976|IPR023198|IPR023214 Beta-phosphoglucomutase hydrolase|HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF19|SSF56784|TIGR01509|TIGR02009 NIDE_RS00205 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005194|IPR005195|IPR005196|IPR008928|IPR011013|IPR012341|IPR017045 Galactose mutarotase-like domain|Glycoside hydrolase family 65, C-terminal|Glycoside hydrolase, family 65, N-terminal|Glycoside hydrolase, family 65, central catalytic|Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase|Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824|GO:0005975|GO:0030246 G3DSA:1.50.10.10|G3DSA:2.60.420.10|G3DSA:2.70.98.40|PF03632|PF03633|PF03636|PIRSF036289|PTHR11051|SSF48208|SSF74650 NIDE_RS00210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003718|IPR015946|IPR019904 K homology domain-like, alpha/beta|OsmC/Ohr family|Peroxiredoxin OsmC GO:0004601|GO:0006979 G3DSA:3.30.300.20|PF02566|PTHR33797|PTHR33797:SF1|SSF82784|TIGR03562 NIDE_RS00215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|SSF56784|TIGR01509|TIGR01549 NIDE_RS00220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001451|IPR011004|IPR018357|IPR024688 Hexapeptide repeat|Hexapeptide transferase, conserved site|Maltose/galactoside acetyltransferase|Trimeric LpxA-like GO:0016407|GO:0016740 G3DSA:2.160.10.10|PF00132|PF12464|PS00101|PTHR23416|PTHR23416:SF58|SM01266|SSF51161 NIDE_RS00225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR23026|SSF55469 NIDE_RS00230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 NIDE_RS00235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|PTHR24322:SF211|SSF51735 NIDE_RS00240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PTHR11803|PTHR11803:SF7|SSF55298 NIDE_RS00245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003265|IPR011257|IPR023170 DNA glycosylase|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003824|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PF00730|PTHR10242|PTHR10242:SF0|SM00478|SSF48150 NIDE_RS00250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.30.70.20|G3DSA:3.60.15.10|PF13370|PTHR11935|PTHR11935:SF104|SM00849|SSF54862|SSF56281 NIDE_RS00255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PTHR24198|SM00248|SSF48403 NIDE_RS00260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000895|IPR014306|IPR023416|IPR023418|IPR023419 Hydroxyisourate hydrolase|Transthyretin, conserved site|Transthyretin, thyroxine binding site|Transthyretin/hydroxyisourate hydrolase|Transthyretin/hydroxyisourate hydrolase, superfamily GO:0006144|GO:0033971 G3DSA:2.60.40.180|PF00576|PR00189|PS00768|PS00769|PTHR10395|PTHR10395:SF7|SSF49472|TIGR02962 NIDE_RS00265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|PTHR30346:SF15|SSF46785|SSF53850 NIDE_RS00275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004852|IPR009056|IPR026259 Cytochrome c-like domain|Di-c-type haem protein, MauG/cytochrome c peroxidase|Di-haem cytochrome c peroxidase GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|PF00034|PF03150|PIRSF000294|PTHR30600|PTHR30600:SF7|SSF46626 NIDE_RS00280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004324|IPR020846 Folate-biopterin transporter|Major facilitator superfamily domain GO:0006810|GO:0016021 PF03092|SSF103473 NIDE_RS00285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001763|IPR032816|IPR032818 DedA family|Rhodanese-like domain|SNARE associated Golgi protein G3DSA:3.40.250.10|PF00581|PF09335|PTHR30353|PTHR30353:SF6|SM00450|SSF52821 NIDE_RS00305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003844 Uncharacterised protein family UPF0060 GO:0016020 MF_00010|PF02694|PTHR36116|PTHR36116:SF1|SSF103481 NIDE_RS00310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000551|IPR009061|IPR011794|IPR015358 Hg(II)-responsive transcriptional regulator|MerR-type HTH domain|Putative DNA-binding domain|Transcription regulator MerR, DNA binding GO:0003677|GO:0006355|GO:0045340|GO:0046689 G3DSA:1.10.1660.10|PF00376|PF09278|PR00040|PS00552|PTHR30204|PTHR30204:SF18|SM00422|SSF46955|TIGR02051 NIDE_RS00315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 PF02411 NIDE_RS00320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001802|IPR006121|IPR011795|IPR017969 Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site|Mercuric transport protein periplasmic component|Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0015097|GO:0015694|GO:0030001|GO:0042597|GO:0045340|GO:0046689|GO:0046872 G3DSA:3.30.70.100|PF00403|PR00946|PS01047|SSF55008|TIGR02052 NIDE_RS00330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF109709 NIDE_RS00335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF109709 NIDE_RS00340 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006119|IPR011109 DNA-binding recombinase domain|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PF07508|PTHR30461|PTHR30461:SF3|SM00857|SSF53041 NIDE_RS00345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021322 Protein of unknown function DUF2924 PF11149 NIDE_RS00355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF12844|SM00530|SSF47413 NIDE_RS00375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009061 Putative DNA-binding domain SSF46955 NIDE_RS00385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF13479 NIDE_RS00395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018874 Bacteriophage Mx8, p63, C-terminal PF10546 NIDE_RS00415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006500|IPR014818 Bacteriophage/plasmid primase, P4, C-terminal|DNA primase, phage/plasmid G3DSA:3.40.1360.10|PF08706|PTHR35372|PTHR35372:SF2|SM00885|TIGR01613 NIDE_RS00420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|SSF53098 NIDE_RS00435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001091|IPR002941|IPR003115|IPR017985|IPR029063 DNA methylase N-4/N-6|DNA methylase, N-4 cytosine-specific, conserved site|ParB/Sulfiredoxin|Restriction/modification DNA-methylase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0006306|GO:0008170|GO:0015667|GO:0090124 G3DSA:3.40.50.150|G3DSA:3.90.1530.10|PF01555|PF02195|PR00508|PS00093|SM00470|SSF110849|SSF53335 NIDE_RS00440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001091|IPR002052|IPR002941|IPR003115|IPR015840|IPR029063 DNA methyase, ParB domain-containing|DNA methylase N-4/N-6|DNA methylase, N-6 adenine-specific, conserved site|ParB/Sulfiredoxin|Restriction/modification DNA-methylase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|G3DSA:3.90.1530.10|PF01555|PF02195|PIRSF036758|PR00508|PS00092|PTHR13370|SM00470|SSF110849|SSF53335 NIDE_RS00450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021880 Protein of unknown function DUF3489 PF11994 NIDE_RS00465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008866 Bacteriophage lambda, GpA PF05876 NIDE_RS00485 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 PF05136|TIGR01539 NIDE_RS00490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002142|IPR029045 ClpP/crotonase-like domain|Peptidase S49 GO:0006508|GO:0008233 G3DSA:3.90.226.10|PF01343|PTHR33209|SSF52096 NIDE_RS00495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004195 Head decoration protein D GO:0019028 G3DSA:2.40.300.10|PF02924 NIDE_RS00500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005564 Major capsid protein GpE GO:0019028 PF03864 NIDE_RS00520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016893 Protein of unknown function UCP028589 PIRSF028589 NIDE_RS00550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018964|IPR019228 Bacteriophage phiJL001, Gp84, C-terminal|Bacteriophage phiJL001, Gp84, N-terminal PF09356|PF09931 NIDE_RS00565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032876 Tip attachment protein J PF13550 NIDE_RS00570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|SSF53448 NIDE_RS00575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021251 Protein of unknown function DUF2793 PF10983 NIDE_RS00590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002196|IPR023346|IPR023347 Glycoside hydrolase, family 24|Lysozyme domain|Lysozyme-like domain GO:0003796|GO:0009253|GO:0016998 G3DSA:1.10.530.40|PF00959|PTHR38107|SSF53955 NIDE_RS00605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR015032 MTH538 TIR-like domain PF08937 NIDE_RS00610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000330|IPR001650|IPR014001|IPR025202|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Phospholipase D-like domain|SNF2-related, N-terminal domain GO:0005524 G3DSA:3.30.870.10|G3DSA:3.40.50.300|PF00176|PF00271|PF13091|PTHR10799|PTHR10799:SF576|SM00487|SM00490|SSF52540|SSF56024 NIDE_RS00615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009537|IPR029063 Domain of unknown function DUF1156|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF06634|SSF53335 NIDE_RS00620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024220 Protein of unknown function DUF3780 PF12635 NIDE_RS00625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007555|IPR026876 Fn3 associated repeat|Protein of unknown function DUF499 PF04465|PF13287|PTHR41711|PTHR41711:SF1 NIDE_RS00630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002145|IPR010985|IPR013321 Arc-type ribbon-helix-helix|Ribbon-helix-helix|Ribbon-helix-helix protein, CopG GO:0006355 G3DSA:1.10.1220.10|PF01402|SSF47598 NIDE_RS00635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|PTHR33713|PTHR33713:SF2|SSF143120|TIGR01552 NIDE_RS00640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|PTHR33755|SSF143011 NIDE_RS00645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001650|IPR006935|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF00271|PF04851|PTHR30195|PTHR30195:SF3|SM00487|SSF52540 NIDE_RS00655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009362 Protein of unknown function DUF1016 PF06250|PTHR30547|PTHR30547:SF0 NIDE_RS00660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002052|IPR003356|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|PTHR30195|PTHR30195:SF2|SSF53335 NIDE_RS00665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011038|IPR014878 Calycin-like|Domain of unknown function DUF1794 PF08768|SSF50814 NIDE_RS00670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008972 Cupredoxin G3DSA:2.60.40.420 NIDE_RS00675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008928|IPR011613|IPR012341 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family|Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|PF00723|PTHR31616|PTHR31616:SF0|SSF48208 NIDE_RS00680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 G3DSA:3.40.50.2000|PF00982|PTHR10788|PTHR10788:SF6|SSF53756 NIDE_RS00685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003337|IPR006379|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|Trehalose-phosphatase GO:0003824|GO:0005992 G3DSA:3.40.50.1000|PF02358|PTHR10788|SSF56784|TIGR00685|TIGR01484 NIDE_RS00690 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002589 Macro domain G3DSA:3.40.220.10|PF01661|PTHR12521|SM00506|SSF52949 NIDE_RS00700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016898|IPR022300|IPR022488|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Polyphosphate kinase 2|Polyphosphate kinase-2-related|Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 G3DSA:3.40.50.300|PF03976|PIRSF028756|PTHR34383|SSF52540|TIGR03709 NIDE_RS00705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025524 Domain of unknown function DUF4412 PF14371 NIDE_RS00710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025524 Domain of unknown function DUF4412 PF14371 NIDE_RS00715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006685|IPR010920|IPR011014 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|PF00924|PTHR30566|SSF50182|SSF82861 NIDE_RS00720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004129|IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|Glycerophosphoryl diester phosphodiesterase|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081|GO:0008889 G3DSA:3.20.20.190|PF03009|PTHR23344|SSF51695 NIDE_RS00725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS00730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 G3DSA:3.30.1360.20|MF_00434|PF01329|PTHR12599|SSF55248 NIDE_RS00735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006158|IPR006638|IPR023404|IPR023970|IPR023984 Cobalamin (vitamin B12)-binding domain|Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM, alpha/beta horseshoe|Ribosomal peptide maturation radical SAM protein 1 GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.80.30.20|PF02310|PTHR11918|PTHR11918:SF64|SM00729|SSF102114|TIGR03975 NIDE_RS00740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003779|IPR004675|IPR026445|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Alkylhydroperoxidase/carboxymuconolactone decarboxylase family|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|PTHR33930|PTHR33930:SF4|SSF69118|TIGR00778|TIGR04169 NIDE_RS00745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000760|IPR020550|IPR020583|IPR022337 Inositol monophosphatase|Inositol monophosphatase, SuhB|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site GO:0008934|GO:0046854|GO:0046855 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PR01959|PS00629|PS00630|PTHR20854|PTHR20854:SF4|SSF56655 NIDE_RS00750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 PF05066 NIDE_RS00755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004463|IPR011334|IPR015870|IPR020568 Ribosomal protein S5 domain 2-type fold|UDP-3-O-acyl N-acetylglucosamine deacetylase|UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal|UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 G3DSA:3.30.1700.10|G3DSA:3.30.230.20|MF_00388|PF03331|PTHR33694|PTHR33694:SF1|SSF54211|TIGR00325 NIDE_RS00760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS00770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003796|IPR005144 ATP-cone domain|Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MF_00440|PF03477|PTHR30455|PTHR30455:SF2|TIGR00244 NIDE_RS00775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0003824|GO:0004372|GO:0006544|GO:0006563|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|PTHR11680|SSF53383 NIDE_RS00780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000244|IPR009027|IPR020069|IPR020070|IPR020594 Ribosomal protein L9|Ribosomal protein L9, C-terminal|Ribosomal protein L9, N-terminal|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|PS00651|PTHR21368|SSF55653|SSF55658|TIGR00158 NIDE_RS00790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13086 NIDE_RS00810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 NIDE_RS00835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006118|IPR006119|IPR009057 Homeodomain-like|Recombinase, conserved site|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:1.10.10.60|G3DSA:3.40.50.1390|PF00239|PS00397|PTHR30461|SM00857|SSF53041 NIDE_RS00845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001128|IPR002401|IPR017972 Cytochrome P450|Cytochrome P450, E-class, group I|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00385|PR00463|PS00086|PTHR24291|PTHR24291:SF46|SSF48264 NIDE_RS00850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PF03748 NIDE_RS00855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007263 Protein of unknown function DUF393 PF04134|PTHR34290 NIDE_RS00860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000551|IPR003759|IPR006158|IPR009061 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-binding module, cap domain|MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355|GO:0031419|GO:0046872 G3DSA:1.10.1660.10|G3DSA:3.40.50.280|PF02310|PF02607|PF13411|SM00422|SSF46955|SSF52242 NIDE_RS00870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR011990|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS00875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS00885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS00895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001509|IPR010099|IPR013549|IPR016040 Domain of unknown function DUF1731|Epimerase family protein SDR39U1|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PF08338|PTHR11092|PTHR11092:SF0|SSF51735|TIGR01777 NIDE_RS00900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025423 Domain of unknown function DUF4149 PF13664 NIDE_RS00905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001478 PDZ domain GO:0005515 G3DSA:2.30.42.10|PF13180|PTHR32060|SM00228|SSF50156 NIDE_RS00910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10 NIDE_RS00920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002081|IPR005101|IPR006050|IPR014729|IPR018394 Cryptochrome/DNA photolyase class 1|Cryptochrome/DNA photolyase class 1, conserved site, C-terminal|Cryptochrome/DNA photolyase, FAD-binding domain|DNA photolyase, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:1.10.579.10|G3DSA:1.25.40.80|G3DSA:3.40.50.620|PF00875|PF03441|PR00147|PS00394|PS00691|PTHR11455|PTHR11455:SF18|SSF48173|SSF52425 NIDE_RS00925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007553|IPR013560|IPR017087 Domain of unknown function DUF1722|Domain of unknown function DUF523|Uncharacterised conserved protein UCP037004 PF04463|PF08349|PIRSF037004|PTHR30087|PTHR30087:SF0 NIDE_RS00940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016087 Chalcone isomerase GO:0016872 PF16036|SSF54626 NIDE_RS00945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 NIDE_RS00950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|PTHR24322|SSF51735 NIDE_RS00955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PTHR10742|PTHR10742:SF275|SSF51905 NIDE_RS00960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010775 Protein of unknown function DUF1365 PF07103|PTHR33973 NIDE_RS00965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003333|IPR029063 Mycolic acid cyclopropane synthase|S-adenosyl-L-methionine-dependent methyltransferase GO:0008610 G3DSA:3.40.50.150|PF02353|PIRSF003085|PTHR10108|PTHR10108:SF795|SSF53335 NIDE_RS00970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021306 Protein of unknown function DUF2878 PF11086 NIDE_RS00985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000184|IPR013686 Bacterial surface antigen (D15)|Polypeptide-transport-associated, ShlB-type GO:0019867 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF01103|PF08479|PTHR34597|PTHR34597:SF1 NIDE_RS00990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000836|IPR004467|IPR023031|IPR029057 Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004588|GO:0006221|GO:0009116 G3DSA:3.40.50.2020|MF_01208|PF00156|PTHR19278|SSF53271|TIGR00336 NIDE_RS01005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018711 Phosphodiester glycosidase PF09992 NIDE_RS01010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF458|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 NIDE_RS01015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS01025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001750|IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 MF_00445|PF00361|PR01434|PTHR22773|PTHR22773:SF41|TIGR01770 NIDE_RS01030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001750|IPR003918|IPR010227 NADH-quinone oxidoreductase, chain M/4|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PF00361|PR01437|PTHR22773|PTHR22773:SF40|TIGR01972 NIDE_RS01035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001750|IPR003918|IPR010227 NADH-quinone oxidoreductase, chain M/4|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PF00361|PR01437|PTHR22773|PTHR22773:SF40|TIGR01972 NIDE_RS01040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001516|IPR001750|IPR003945|IPR018393 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH-plastoquinone oxidoreductase, chain 5|NADH-plastoquinone oxidoreductase, chain 5 subgroup|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 PF00361|PF00662|PR01434|PR01435|PTHR22773|PTHR22773:SF50|TIGR01974 NIDE_RS01045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 MF_01456|PF00420|PTHR11434|PTHR11434:SF0 NIDE_RS01050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 PF00499|PTHR33269|PTHR33269:SF1 NIDE_RS01060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001041|IPR006478|IPR006656|IPR006657|IPR006963|IPR009010|IPR012675|IPR017900|IPR019574 2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Aspartate decarboxylase-like domain|Beta-grasp domain|Formate dehydrogenase, alpha subunit|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0008863|GO:0009055|GO:0015942|GO:0016491|GO:0030151|GO:0051536|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.30.70.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PF10588|PF13510|PIRSF036643|PS00198|PTHR11615|PTHR11615:SF38|SM00926|SM00929|SSF50692|SSF53706|SSF54292|SSF54862 NIDE_RS01065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001135|IPR022885|IPR029014 NAD(P)H-quinone oxidoreductase subunit D/H|NADH-quinone oxidoreductase, subunit D|NiFe hydrogenase-like GO:0016651|GO:0048038|GO:0051287|GO:0055114 G3DSA:1.10.645.10|MF_01358|PF00346|PTHR11993|PTHR11993:SF10|SSF56762|TIGR01962 NIDE_RS01070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001268|IPR010218|IPR020396 NADH dehydrogenase, subunit C|NADH:ubiquinone oxidoreductase, 30kDa subunit|NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0008137|GO:0016651|GO:0055114 MF_01357|PD001581|PF00329|PS00542|PTHR10884|PTHR10884:SF6|SSF143243|TIGR01961 NIDE_RS01075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006137|IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit|NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0008137|GO:0048038|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.40.50.700|MF_01356|PF01058|PS01150|PTHR11995|SSF56770|TIGR01957 NIDE_RS01080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000440|IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid|NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0016651|GO:0055114 MF_01394|PF00507|PTHR11058 NIDE_RS01090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005259|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 G3DSA:3.40.50.300|MF_00983|PTHR30580|SSF52540|TIGR00595 NIDE_RS01100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS01105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF02518|PF08448|PF13426|PR00344|PTHR24423|PTHR24423:SF458|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS01115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006383|IPR006385|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial GO:0008152|GO:0016791 G3DSA:3.40.50.1000|PF12710|PTHR10000|PTHR10000:SF28|SSF56784|TIGR01488|TIGR01490 NIDE_RS01120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007197|IPR013785|IPR024924|IPR027621 7-carboxy-7-deazaguanine synthase-like|Aldolase-type TIM barrel|Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|MF_00917|PF04055|PF13394|PIRSF000370|PTHR11228|PTHR11228:SF6|SSF102114|TIGR04349 NIDE_RS01125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000819|IPR008283|IPR011356|IPR023042 Peptidase M17, leucine aminopeptidase|Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal|Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.220.10|G3DSA:3.40.630.10|MF_00181|PF00883|PF02789|PR00481|PS00631|PTHR11963|PTHR11963:SF13|SSF52949|SSF53187 NIDE_RS01130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001764|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 G3DSA:3.20.20.300|PF00933|PTHR30480|PTHR30480:SF5|SSF51445 NIDE_RS01140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR020948 Phosphate-starvation-induced PsiE-like PF06146 NIDE_RS01150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PF13520|PIRSF006060|PTHR11785|PTHR11785:SF328 NIDE_RS01155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011697|IPR029062 Class I glutamine amidotransferase-like|Peptidase C26 GO:0006541|GO:0016787 G3DSA:3.40.50.880|PF07722|PTHR11922|PTHR11922:SF18|SSF52317 NIDE_RS01170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000994 Peptidase M24, structural domain G3DSA:3.90.230.10|PF00557|PTHR10804|PTHR10804:SF109|SSF55920 NIDE_RS01175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003369|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PF02416|TIGR01411 NIDE_RS01190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 PF07238 NIDE_RS01195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR003959|IPR004487|IPR010603|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type GO:0005524|GO:0006457|GO:0008270|GO:0046983|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|PTHR11262|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382 NIDE_RS01200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001907|IPR018215|IPR023562|IPR029045|IPR033135 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, Ser active site|ClpP, histidine active site|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00381|PS00382|PTHR10381|SSF52096|TIGR00493 NIDE_RS01205 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005215|IPR008880|IPR008881|IPR027304 Trigger factor|Trigger factor, C-terminal|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.30.70.1050|MF_00303|PF05697|PF05698|PIRSF003095|PTHR30560|SSF102735|SSF109998|SSF54534|TIGR00115 NIDE_RS01215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF13646|SM00567|SSF48371 NIDE_RS01220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|SSF53822 NIDE_RS01230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|PTHR30329|PTHR30329:SF4|SSF103088 NIDE_RS01235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001185|IPR019823|IPR029027 Large-conductance mechanosensitive channel|Large-conductance mechanosensitive channel, conserved site|Single alpha-helix domain GO:0005216|GO:0006810|GO:0016021 G3DSA:1.20.5.220|MF_00115|PF01741|PR01264|PS01327|PTHR30266|PTHR30266:SF2|SSF81330|TIGR00220 NIDE_RS01240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007433 Protein of unknown function DUF481 PF04338 NIDE_RS01245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|SM00421|SSF46894 NIDE_RS01250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002078|IPR002197|IPR003593|IPR009057|IPR025662|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1 GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.40.50.300|PF00158|PF02954|PR01590|PS00675|PTHR32071|SM00382|SSF46689|SSF52540 NIDE_RS01255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001806|IPR005225|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Small GTPase superfamily GO:0005525|GO:0007264 G3DSA:3.40.50.300|PF00071|PR00449|PTHR24073|PTHR24073:SF529|SM00173|SM00174|SM00175|SSF52540|TIGR00231 NIDE_RS01260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|SSF103088 NIDE_RS01270 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006685|IPR010920|IPR011014|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PTHR30221|PTHR30221:SF7|SSF50182|SSF82689|SSF82861 NIDE_RS01275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007844|IPR032712 AsmA|AsmA-like, C-terminal PF05170|PF13502|PTHR30441|PTHR30441:SF2 NIDE_RS01285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001270|IPR003593|IPR008921|IPR012763|IPR022754|IPR027417 AAA+ ATPase domain|ClpA/B family|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF12169|PF13177|PR00300|PTHR11669|PTHR11669:SF0|SM00382|SSF48019|SSF52540|TIGR02397 NIDE_RS01290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004401 Nucleoid-associated protein YbaB/EbfC family G3DSA:3.30.1310.10|MF_00274|PF02575|PIRSF004555|PTHR33449|SSF82607|TIGR00103 NIDE_RS01295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000093|IPR006171|IPR015967|IPR023627|IPR023628 DNA recombination protein RecR|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|Recombination protein RecR, conserved site|Toprim domain GO:0003677|GO:0006281|GO:0006310 G3DSA:3.40.50.140|MF_00017|PF02132|PF13662|PS01300|PTHR30446|PTHR30446:SF0|SM00493|SSF111304|TIGR00615 NIDE_RS01300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000962|IPR020458 Zinc finger, DksA/TraR C4-type|Zinc finger, DksA/TraR C4-type conserved site GO:0008270 PF01258|PS01102|PTHR33823|PTHR33823:SF2|SSF109635|SSF57716 NIDE_RS01305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PTHR23083|SM00028|SSF48452 NIDE_RS01320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002716|IPR002850|IPR029060 PIN domain|PIN domain-like|PIN family, putative toxin-antitoxin system toxin component PF13470|PTHR34610|PTHR34610:SF3|SSF88723|TIGR00305 NIDE_RS01330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019650 Protein of unknown function DUF2513 PF10711 NIDE_RS01335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 G3DSA:3.40.50.10140|PF13676|SSF52200 NIDE_RS01340 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 PF02486 NIDE_RS01355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002218|IPR004417|IPR023753 FAD/NAD(P)-binding domain|Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0005737|GO:0008033|GO:0016491|GO:0047151|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_01037|PF01134|PR00411|PTHR11806|PTHR11806:SF2|SSF51905|TIGR00137 NIDE_RS01360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF5|SSF56349 NIDE_RS01365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001353|IPR022281|IPR029055 ATP-dependent protease, HslV subunit|Nucleophile aminohydrolases, N-terminal|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0006508|GO:0009376|GO:0051603 G3DSA:3.60.20.10|MF_00248|PF00227|PIRSF039093|PTHR32194|SSF56235|TIGR03692 NIDE_RS01370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR003959|IPR004491|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Heat shock protein HslU|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 G3DSA:1.10.8.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00249|PF00004|PF07724|PF10431|PTHR11262|PTHR11262:SF3|SM00382|SM01086|SSF52540|TIGR00390 NIDE_RS01375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001048|IPR001057|IPR004662 Acetylglutamate kinase|Aspartate/glutamate/uridylate kinase|Glutamate/acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526|GO:0006561 G3DSA:3.40.1160.10|MF_00082_B|PF00696|PIRSF000728|PR00474|PTHR23342|SSF53633|TIGR00761 NIDE_RS01385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|PTHR13061|SSF51161 NIDE_RS01390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002792|IPR005839|IPR005840|IPR006638|IPR007197|IPR012340|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Nucleic acid-binding, OB-fold|Radical SAM|Radical SAM, alpha/beta horseshoe|Ribosomal protein S12 methylthiotransferase RimO|TRAM domain GO:0003824|GO:0005737|GO:0009451|GO:0016740|GO:0018339|GO:0043412|GO:0051536|GO:0051539 G3DSA:2.40.50.140|G3DSA:3.80.30.20|MF_01865|PF00919|PF01938|PF04055|PS01278|PTHR11918|PTHR11918:SF57|SM00729|SSF102114|TIGR00089|TIGR01125 NIDE_RS01395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF79|SM00228|SSF50156|SSF50494|TIGR02037 NIDE_RS01400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 NIDE_RS01405 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF316|SM00448|SM00862|SSF52172 NIDE_RS01410 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR22726 NIDE_RS01415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010295 Protein of unknown function DUF898 PF05987 NIDE_RS01425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003952|IPR003953|IPR014006|IPR015939|IPR023753|IPR027477|IPR030664 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase, FAD-binding site|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain|Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit|Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016491|GO:0016627|GO:0022900|GO:0050660|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|G3DSA:4.10.80.40|PF00890|PF02910|PIRSF000171|PR00368|PS00504|PTHR11632|PTHR11632:SF5|SSF46977|SSF51905|SSF56425|TIGR01812 NIDE_RS01430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003437|IPR015421|IPR015424|IPR020580|IPR020581 Glycine cleavage system P protein|Glycine cleavage system P-protein, N-terminal|Glycine dehydrogenase (decarboxylating)|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0004375|GO:0006544|GO:0006546|GO:0055114 G3DSA:3.40.640.10|MF_00711|PF02347|PTHR11773|PTHR11773:SF1|SSF53383|TIGR00461 NIDE_RS01440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001910|IPR023186 Inosine/uridine-preferring nucleoside hydrolase|Inosine/uridine-preferring nucleoside hydrolase domain G3DSA:3.90.245.10|PF01156|PTHR12304|PTHR12304:SF4|SSF53590 NIDE_RS01445 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002139|IPR002173|IPR011611|IPR011877|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase|Ribokinase, bacterial type|Ribokinase-like GO:0004747|GO:0006014|GO:0016773 G3DSA:3.40.1190.20|PF00294|PR00990|PS00584|PTHR10584|PTHR10584:SF184|SSF53613|TIGR02152 NIDE_RS01450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 NIDE_RS01455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005122|IPR015637 G/U mismatch-specific DNA glycosylase|Uracil-DNA glycosylase-like GO:0006281|GO:0019104 G3DSA:3.40.470.10|PF03167|PTHR12159|SM00986|SM00987|SSF52141 NIDE_RS01465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000086|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PS00893|PTHR11839|PTHR11839:SF9|SSF55811 NIDE_RS01470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006222|IPR006223|IPR013977|IPR022903|IPR027266|IPR028896|IPR029043 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain|Glycine cleavage system T protein|Glycine cleavage system T protein, bacteria GO:0004047|GO:0005515|GO:0006546 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|MF_00259|PF01571|PF08669|PIRSF006487|PTHR13847|PTHR13847:SF5|SSF101790|SSF103025|TIGR00528 NIDE_RS01475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001179|IPR023566 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type GO:0006457 G3DSA:3.10.50.40|PF00254|PTHR10516|SSF54534 NIDE_RS01480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013702|IPR016741|IPR019494 FIST domain, N-terminal|FIST, C-domain|Uncharacterised conserved protein UCP018953 PF08495|PF10442|PIRSF018953|PTHR14939|PTHR14939:SF5|SM00897|SM01204 NIDE_RS01490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005321|IPR016117 ArgJ-like domain|Peptidase S58, DmpA G3DSA:3.60.70.12|PF03576|PTHR36512|PTHR36512:SF1|SSF56266 NIDE_RS01495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279|IPR011108|IPR022712 Beta-Casp domain|Metallo-beta-lactamase|Zn-dependent metallo-hydrolase, RNA specificity domain G3DSA:3.60.15.10|PF00753|PF07521|PF10996|PTHR11203|PTHR11203:SF11|SM00849|SM01027|SSF56281 NIDE_RS01500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|PTHR31223|PTHR31223:SF1|SSF102405|TIGR00730 NIDE_RS01515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 NIDE_RS01520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007462 Protein of unknown function DUF502 PF04367|PTHR31876|PTHR31876:SF1 NIDE_RS01525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005651 Uncharacterised protein family UPF0434/Trm112 G3DSA:2.20.25.10|PF03966|SSF158997 NIDE_RS01550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 NIDE_RS01555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009061|IPR010093|IPR011991 Putative DNA-binding domain|SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|SSF46955|TIGR01764 NIDE_RS01560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 PF02486 NIDE_RS01570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002931|IPR021878|IPR025403 Domain of unknown function DUF4129|Protein of unknown function DUF3488|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF11992|PF13559|PTHR33490|PTHR33490:SF4|SM00460|SSF54001 NIDE_RS01575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002881 Domain of unknown function DUF58 PF01882|PTHR34351|PTHR34351:SF1 NIDE_RS01580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR011703|IPR016366|IPR027417 AAA+ ATPase domain|ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PTHR11603|PTHR11603:SF155|SM00382|SSF52540 NIDE_RS01590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007314 Haem-binding uptake, Tiki superfamily, ChaN PF04187|PTHR31620|PTHR31620:SF8|SSF159501 NIDE_RS01600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008265|IPR013830 Lipase, GDSL, active site|SGNH hydrolase-type esterase domain GO:0006629|GO:0016298 G3DSA:3.40.50.1110|PF13472|PS01098|PTHR30383|SSF52266 NIDE_RS01605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF86|SM00382|SSF52540 NIDE_RS01610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30287 NIDE_RS01615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001930|IPR014782|IPR024571 ERAP1-like C-terminal domain|Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase|Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0006508|GO:0008237|GO:0008270 G3DSA:1.10.390.10|PF01433|PF11838|PR00756|PTHR11533|PTHR11533:SF190|SSF55486|SSF63737 NIDE_RS01620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004788|IPR020672 Ribose 5-phosphate isomerase, type A|Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 G3DSA:3.30.70.260|G3DSA:3.40.50.1360|MF_00170|PF06026|PTHR11934|SM01134|SSF100950|SSF75445|TIGR00021 NIDE_RS01625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 G3DSA:3.40.367.20|PF02685|PTHR30514|PTHR30514:SF0|SSF53067|TIGR00749 NIDE_RS01630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005900|IPR006148 6-phosphogluconolactonase, DevB-type|Glucosamine/galactosamine-6-phosphate isomerase GO:0005975|GO:0006098|GO:0017057 G3DSA:3.40.50.1360|PF01182|PTHR11054|SSF100950|TIGR01198 NIDE_RS01635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 G3DSA:3.40.50.10490|PF00342|PR00662|PTHR11469|SSF53697 NIDE_RS01645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000100|IPR014721|IPR020568 Ribonuclease P|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|MF_00227|PD003629|PF00825|PTHR33992|SSF54211|TIGR00188 NIDE_RS01650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001708|IPR019998|IPR028053|IPR028055 Membrane insertase OXA1/ALB3/YidC|Membrane insertase YidC|Membrane insertase YidC, N-terminal|Membrane insertase YidC/Oxa1, C-terminal GO:0016021|GO:0051205 MF_01810|PF02096|PF14849|PR00701|PR01900|PTHR12428|PTHR12428:SF14|TIGR03592|TIGR03593 NIDE_RS01655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027266|IPR027368|IPR027417 GTP binding domain|GTP-binding protein TrmE, N-terminal|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|MnmE, helical domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE|tRNA modification GTPase MnmE domain 2 GO:0003924|GO:0005515|GO:0005525|GO:0005622|GO:0006400 G3DSA:1.20.120.430|G3DSA:3.30.1360.120|G3DSA:3.40.50.300|MF_00379|PF01926|PF10396|PF12631|PTHR11649|PTHR11649:SF56|SSF116878|SSF52540|TIGR00231|TIGR00450 NIDE_RS01660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002218|IPR004416|IPR020595|IPR023753|IPR026904 FAD/NAD(P)-binding domain|GidA associated domain 3|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0002098|GO:0008033|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PS01280|PS01281|PTHR11806|PTHR11806:SF0|SM01228|SSF51905|TIGR00136 NIDE_RS01670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PTHR13696|PTHR13696:SF52|SSF52540 NIDE_RS01675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003115|IPR004437 ParB/RepB/Spo0J partition protein family|ParB/Sulfiredoxin GO:0003677 G3DSA:3.90.1530.10|PF02195|PTHR33375|SM00470|SSF109709|SSF110849|TIGR00180 NIDE_RS01680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007607 Protein of unknown function DUF583 PF04519|PTHR35024|PTHR35024:SF2 NIDE_RS01685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007607 Protein of unknown function DUF583 PF04519|PTHR35024|PTHR35024:SF2 NIDE_RS01690 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004506|IPR014729|IPR023382 Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740|GO:0016783 G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|MF_00144|PF03054|PTHR11933|PTHR11933:SF10|SSF52402|TIGR00420 NIDE_RS01695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000711|IPR026015 ATPase, OSCP/delta subunit|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain GO:0015986|GO:0046933 G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|PTHR11910|SSF47928|TIGR01145 NIDE_RS01700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR020003|IPR023366|IPR027417 ATP synthase subunit alpha-like domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex, alpha subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0045261|GO:0046034|GO:0046933|GO:0046961 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PIRSF039088|PS00152|PTHR15184|PTHR15184:SF3|SSF47917|SSF50615|SSF52540|TIGR00962 NIDE_RS01705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000131|IPR023632|IPR023633 ATPase, F1 complex, gamma subunit|ATPase, F1 complex, gamma subunit conserved site|ATPase, F1 complex, gamma subunit domain GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:1.10.287.80|G3DSA:3.40.1380.10|MF_00815|PF00231|PR00126|PS00153|PTHR11693|SSF52943|TIGR01146 NIDE_RS01710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000194|IPR000793|IPR003593|IPR004100|IPR005722|IPR020003|IPR024034|IPR027417 AAA+ ATPase domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex beta subunit/V1 complex, C-terminal|ATPase, F1 complex, beta subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0046034|GO:0046933 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PIRSF039072|PS00152|PTHR15184|PTHR15184:SF8|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039 NIDE_RS01715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001469|IPR020546|IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain|ATPase, F1 complex, delta/epsilon subunit|ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:1.20.5.440|G3DSA:2.60.15.10|MF_00530|PD000944|PF00401|PF02823|PTHR13822|SSF51344|TIGR01216 NIDE_RS01725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021796 Protein of unknown function DUF3365 PF11845 NIDE_RS01730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PF01479|PS01129|PTHR11079|PTHR11079:SF73|SM00363|SSF55120|SSF55174|TIGR00005 NIDE_RS01740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PF01479|PS01129|PTHR11079|PTHR11079:SF73|SM00363|SSF55120|SSF55174|TIGR00005 NIDE_RS01750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:2.20.28.40 NIDE_RS01755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR13355|PTHR13355:SF5|SSF55729 NIDE_RS01760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001626|IPR029022 ABC transporter, BtuC-like|ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 G3DSA:1.10.3470.10|PF00950|PTHR30477|PTHR30477:SF0|SSF81345 NIDE_RS01765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 NIDE_RS01770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006127|IPR006128|IPR006129 Adhesin B|Adhesion lipoprotein|Periplasmic solute binding protein, ZnuA-like GO:0007155|GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|PR00690|PR00691|PTHR30477|PTHR30477:SF1|SSF53807 NIDE_RS01775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 G3DSA:3.30.420.40|MF_01270|PF03702|PTHR30605|PTHR30605:SF0|SSF53067 NIDE_RS01780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024402 Domain of unknown function DUF2726 PF10881 NIDE_RS01785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR014162|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Tol-Pal system, YbgF GO:0005515 G3DSA:1.25.40.10|PF13174|PF13432|PTHR26312|PTHR26312:SF74|SSF48452|TIGR02795 NIDE_RS01790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011050|IPR012334 Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF13229|PTHR22990|SSF51126 NIDE_RS01800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000189|IPR008258|IPR023346 Lysozyme-like domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|PF01464|PS00922|PTHR21666|SSF53955 NIDE_RS01805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025847 MEDS domain PF14417 NIDE_RS01815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001555|IPR002376|IPR005793|IPR005794|IPR011034 Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|Methionyl-tRNA formyltransferase|Phosphoribosylglycinamide formyltransferase, active site GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|PS00373|PTHR11138|SSF50486|SSF53328|TIGR00460 NIDE_RS01820 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001678|IPR004573|IPR006027|IPR018314|IPR023267|IPR029063 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site|NusB/RsmB/TIM44|RNA (C5-cytosine) methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type|rRNA small subunit methyltransferase B GO:0003723|GO:0006355|GO:0006364|GO:0008168|GO:0008649 G3DSA:1.10.940.10|G3DSA:3.30.70.1170|G3DSA:3.40.50.150|PF01029|PF01189|PR02008|PS01153|PTHR22807|PTHR22807:SF30|SSF48013|SSF53335|TIGR00563 NIDE_RS01825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01085|PS01086|PTHR11749|SSF51366|TIGR01163 NIDE_RS01830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002319|IPR004529|IPR011991|IPR022917 Phenylalanine-tRNA ligase alpha subunit, bacterial/archaeal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit|Winged helix-turn-helix DNA-binding domain GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:1.10.10.10|G3DSA:3.30.930.10|MF_00282|PF01409|PTHR11538|PTHR11538:SF40|SSF46785|SSF55681|TIGR00468 NIDE_RS01835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004531|IPR005146|IPR005147|IPR009061 B3/B4 tRNA-binding domain|Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic|Putative DNA-binding domain|tRNA synthetase, B5-domain GO:0000166|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432 G3DSA:3.30.56.20|G3DSA:3.30.930.10|PF03484|PTHR10947|SM00873|SM00874|SSF46955|SSF55681|TIGR00471 NIDE_RS01840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|MF_00382|PD002389|PF00453|PR00062|PS00937|PTHR10986|PTHR10986:SF12|SSF74731|TIGR01032 NIDE_RS01845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001706|IPR018265|IPR021137 Ribosomal protein L35|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00514|PF01632|PR00064|PS00936|PTHR33343|SSF143034|TIGR00001 NIDE_RS01850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001288|IPR019813|IPR019814|IPR019815 Translation initiation factor 3|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal|Translation initiation factor 3, conserved site GO:0003743|GO:0006413 G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|PS00938|PTHR10938|SSF54364|SSF55200|TIGR00168 NIDE_RS01855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002314|IPR002320|IPR004095|IPR004154|IPR012675|IPR012676|IPR012947|IPR018163 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Beta-grasp domain|TGS|TGS-like|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0016876|GO:0043039 G3DSA:3.10.20.30|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF02824|PF03129|PF07973|PR01047|PTHR11451|PTHR11451:SF5|SM00863|SSF52954|SSF55186|SSF55681|SSF81271|TIGR00418 NIDE_RS01865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PTHR33175|SM00411|SSF47729 NIDE_RS01875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PTHR33221|PTHR33221:SF1|SSF46785|TIGR00738 NIDE_RS01880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001455|IPR005117|IPR006066|IPR006067|IPR007842 HEPN domain|Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site|TusA-like domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 G3DSA:1.20.120.330|G3DSA:3.30.110.40|G3DSA:3.30.413.10|G3DSA:3.90.480.10|PF01077|PF01206|PF03460|PF05168|PR00397|PS00365|PTHR32439|PTHR32439:SF0|SSF55124|SSF56014|SSF64307 NIDE_RS01885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002500|IPR004511|IPR014729 Phosphoadenosine phosphosulphate reductase|Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004604|GO:0008152|GO:0019379|GO:0055114 G3DSA:3.40.50.620|MF_00063|PF01507|PIRSF000857|PTHR23293|PTHR23293:SF5|SSF52402|TIGR00434 NIDE_RS01890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000312|IPR017459 Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3 GO:0008152|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|PF00591|PF02885|PTHR11922|PTHR11922:SF5|SSF47648|SSF52418 NIDE_RS01895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002500|IPR014729 Phosphoadenosine phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0008152 G3DSA:3.40.50.620|PF01507|PTHR23293|PTHR23293:SF6|SSF52402 NIDE_RS01900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000795|IPR004160|IPR005225|IPR009000|IPR009001|IPR011779|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Sulphate adenylyltransferase, large subunit|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation protein, beta-barrel domain GO:0003924|GO:0005525|GO:0006790 G3DSA:2.40.30.10|G3DSA:3.40.50.300|PF00009|PF01583|PF03143|PR00315|PS00301|PTHR23115|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR02034 NIDE_RS01905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019591|IPR027417 Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|MF_02040|PF10609|PTHR23264|PTHR23264:SF19|SSF52540 NIDE_RS01910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal GO:0015979|GO:0015995|GO:0016491|GO:0055114 PF08369 NIDE_RS01920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002876|IPR017856|IPR026563|IPR026564|IPR029072 Integrase, N-terminal zinc-binding domain-like|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 2|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.1270.10|G3DSA:3.30.70.980|MF_00693|PF01709|PTHR12532|SSF75625|TIGR01033 NIDE_RS01925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000085|IPR003583|IPR010994|IPR011114|IPR012340|IPR013849 Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|DNA helicase, Holliday junction RuvA type, domain III, C-terminal|Helix-hairpin-helix DNA-binding motif, class 1|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003677|GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 G3DSA:1.10.150.20|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|PF14520|PTHR33796|SM00278|SSF46929|SSF47781|SSF50249|TIGR00084 NIDE_RS01930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR004605|IPR008823|IPR008824|IPR011991|IPR027417 AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|PTHR13779|PTHR13779:SF25|SM00382|SSF46785|SSF52540|TIGR00635 NIDE_RS01935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001086|IPR002701|IPR002912|IPR008242|IPR010957|IPR018528|IPR020822 ACT domain|Bifunctional P-protein, chorismate mutase/prephenate dehydratase|Chorismate mutase|Chorismate mutase, type II|Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain|Prephenate dehydratase|Prephenate dehydratase, conserved site GO:0004106|GO:0004664|GO:0005737|GO:0008152|GO:0009094|GO:0016597|GO:0046417 G3DSA:1.20.59.10|G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PF01817|PF01842|PIRSF001500|PS00857|PS00858|PTHR21022|PTHR21022:SF0|SM00830|SSF48600|SSF53850|SSF55021|TIGR01807 NIDE_RS01940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0000105|GO:0003824|GO:0004400|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|PTHR11751|PTHR11751:SF347|SSF53383|TIGR01141 NIDE_RS01945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006218|IPR006268|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0003824|GO:0009058|GO:0009073|GO:0016832 G3DSA:3.20.20.70|G3DSA:3.30.70.1140|PF00793|PTHR21057|PTHR21057:SF1|SSF51569|TIGR01361 NIDE_RS01950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003099|IPR008927|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 G3DSA:1.10.3660.10|G3DSA:3.40.50.720|PF02153|PTHR21363|PTHR21363:SF0|SSF48179|SSF51735 NIDE_RS01955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001986|IPR006264|IPR013792|IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0016765 G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|PS00104|PS00885|PTHR21090|PTHR21090:SF5|SSF55205|TIGR01356 NIDE_RS01960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003136|IPR011994|IPR027417 Cytidylate kinase|Cytidylate kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0004127|GO:0005524|GO:0006139 G3DSA:3.40.50.300|MF_00238|PF02224|PTHR21299|SSF52540|TIGR00017 NIDE_RS01965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|PTHR10434|PTHR10434:SF21|SM00563|SSF69593 NIDE_RS01970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PR00681|PTHR10724|PTHR10724:SF6|SM00316|SSF50249|TIGR00717 NIDE_RS01975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002142|IPR004635|IPR029045 ClpP/crotonase-like domain|Peptidase S49|Peptidase S49, SppA GO:0006508|GO:0008233 G3DSA:3.90.226.10|PF01343|PTHR33209|SSF52096|TIGR00706 NIDE_RS01980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PTHR33175|SM00411|SSF47729 NIDE_RS01985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal GO:0015979|GO:0015995|GO:0016491|GO:0055114 PF08369 NIDE_RS01995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:2.130.10.130|PF13517|PTHR15498|PTHR15498:SF50|SSF69318 NIDE_RS02010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001967|IPR012338|IPR018044 Beta-lactamase/transpeptidase-like|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 G3DSA:3.40.710.10|PF00768|PR00725|PTHR21581|PTHR21581:SF1|SSF56601 NIDE_RS02020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|PTHR30346:SF3|SSF46785|SSF53850 NIDE_RS02025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001486|IPR009050|IPR012292 Globin-like|Globin/Protoglobin|Truncated hemoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|PF01152|PTHR10681|PTHR10681:SF116|SSF46458 NIDE_RS02040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006095|IPR006096|IPR006097|IPR014362|IPR016040 Glutamate dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal|Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain|NAD(P)-binding domain GO:0006520|GO:0016491|GO:0016639|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF00208|PF02812|PIRSF000185|PR00082|PS00074|PTHR11606|SM00839|SSF51735|SSF53223 NIDE_RS02045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000544|IPR020605 Octanoyltransferase|Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 G3DSA:3.90.1550.10|MF_00013|PD006086|PS01313|PTHR10993|SSF55681|TIGR00214 NIDE_RS02050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF79|SSF50156|SSF50494 NIDE_RS02055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR011991|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF04539|PF04542|PF04545|PR00046|PS00715|PS00716|PTHR30603|PTHR30603:SF0|SSF88659|SSF88946|TIGR02937 NIDE_RS02060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014816|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 G3DSA:3.10.330.20|G3DSA:3.40.50.150|PF08704|PF14801|PIRSF017269|PTHR12133|SSF53335 NIDE_RS02065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24321|PTHR24321:SF6|SM00822|SSF51735 NIDE_RS02070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011342|IPR013708|IPR016040|IPR022893 NAD(P)-binding domain|Shikimate dehydrogenase|Shikimate dehydrogenase family|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0019632|GO:0050661|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_00222|PF08501|PTHR21089|PTHR21089:SF1|SSF51735|SSF53223|TIGR00507 NIDE_RS02075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000623|IPR027417|IPR031322 P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase G3DSA:3.40.50.300|MF_00109|PF01202|PR01100|PTHR21087|SSF52540 NIDE_RS02095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004386|IPR007712 Toxin-antitoxin system, RelE/ParE toxin family|Toxin-antitoxin system, YafQ-like toxin PF15738|PIRSF006156|PTHR40588|SSF143011|TIGR02385 NIDE_RS02110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007337|IPR026262 Antitoxin DinJ|RelB antitoxin/Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 PF04221|PIRSF003108|TIGR02384 NIDE_RS02115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004386|IPR007712 Toxin-antitoxin system, RelE/ParE toxin family|Toxin-antitoxin system, YafQ-like toxin PF15738|PIRSF006156|PTHR40588|SSF143011|TIGR02385 NIDE_RS02125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021830 Protein of unknown function DUF3422 PF11902 NIDE_RS02130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS02135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 NIDE_RS02140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|SSF74653|TIGR01352 NIDE_RS02145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001282|IPR016040|IPR019796|IPR022674|IPR022675 Glucose-6-phosphate dehydrogenase|Glucose-6-phosphate dehydrogenase, C-terminal|Glucose-6-phosphate dehydrogenase, NAD-binding|Glucose-6-phosphate dehydrogenase, active site|NAD(P)-binding domain GO:0004345|GO:0006006|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00966|PF00479|PF02781|PIRSF000110|PR00079|PS00069|PTHR23429|PTHR23429:SF0|SSF51735|SSF55347|TIGR00871 NIDE_RS02150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002569|IPR028427 Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MsrA GO:0006979|GO:0008113|GO:0016671|GO:0030091|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|PTHR10173|PTHR10173:SF34|SSF55068|TIGR00401 NIDE_RS02160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011063|IPR012089|IPR014729 2-thiocytidine tRNA biosynthesis protein, TtcA|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0008033 G3DSA:3.40.50.620|MF_01850|PF01171|PIRSF004976|PTHR11807|PTHR11807:SF16|SSF52402 NIDE_RS02170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase PF15887 NIDE_RS02175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011095|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase, C-terminal|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|PF07478|PTHR23132|PTHR23132:SF9|SSF52440|SSF56059 NIDE_RS02180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|SSF56925 NIDE_RS02190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001345|IPR005952|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase 1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0004619|GO:0006096|GO:0008152|GO:0016868 G3DSA:3.40.50.1240|MF_01039|PF00300|PIRSF000709|PS00175|PTHR11931|SM00855|SSF53254|TIGR01258 NIDE_RS02210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024399 Protein of unknown function DUF2628 PF10947 NIDE_RS02215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424 Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PS00600|PTHR11986|PTHR11986:SF79|SSF53383|TIGR00707 NIDE_RS02220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002292|IPR006130|IPR006131|IPR006132|IPR024904 Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Ornithine carbamoyltransferase|Ornithine/putrescine carbamoyltransferase GO:0004585|GO:0006520|GO:0006591|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_01109|PF00185|PF02729|PR00100|PR00102|PS00097|PTHR11405|PTHR11405:SF1|SSF53671|TIGR00658 NIDE_RS02225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001518|IPR014729|IPR018223|IPR023434|IPR024074 Argininosuccinate synthase|Argininosuccinate synthase, conserved site|Argininosuccinate synthase, type 1 subfamily|Argininosuccinate synthetase, catalytic/multimerisation domain body|Rossmann-like alpha/beta/alpha sandwich fold GO:0004055|GO:0005524|GO:0006526 G3DSA:1.20.5.470|G3DSA:3.40.50.620|G3DSA:3.90.1260.10|MF_00005|PF00764|PS00564|PS00565|PTHR11587|PTHR11587:SF2|SSF52402|SSF69864|TIGR00032 NIDE_RS02230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000362|IPR008948|IPR009049|IPR020557|IPR022761|IPR024083|IPR029419 Argininosuccinate lyase|Argininosuccinate lyase, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004056|GO:0042450 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00006|PF00206|PF14698|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF3|SSF48557|TIGR00838 NIDE_RS02235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR022653|IPR022657|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, conserved site|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PR01179|PR01181|PS00878|PS00879|PTHR11482|PTHR11482:SF5|SSF50621|SSF51419|TIGR01048 NIDE_RS02240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002220|IPR005263|IPR013785|IPR020624 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, conserved site GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00665|PTHR12128|PTHR12128:SF34|SM01130|SSF51569|TIGR00674 NIDE_RS02245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000846|IPR016040|IPR022663|IPR022664|IPR023940 Dihydrodipicolinate reductase|Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|Dihydrodipicolinate reductase, conserved site|NAD(P)-binding domain GO:0008839|GO:0009089|GO:0055114 G3DSA:3.40.50.720|MF_00102|PF01113|PF05173|PIRSF000161|PS01298|PTHR20836|SSF51735|SSF55347|TIGR00036 NIDE_RS02250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007029|IPR009078|IPR011017 Ferritin-like superfamily|TRASH domain|YHS domain PF04945|SM00746|SSF47240 NIDE_RS02260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001585|IPR004731|IPR013785|IPR018225|IPR022999 Aldolase-type TIM barrel|Transaldolase type 3B, putative|Transaldolase type 3B/Fructose-6-phosphate aldolase|Transaldolase, active site|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0004801|GO:0005975 G3DSA:3.20.20.70|MF_00494|PF00923|PS01054|PTHR10683|SSF51569|TIGR00875 NIDE_RS02265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005122 Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|PTHR33693|PTHR33693:SF2|SM00986|SM00987|SSF52141 NIDE_RS02270 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|PTHR21666|PTHR21666:SF182|SSF53955 NIDE_RS02275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007835|IPR025286 MOFRL domain|MOFRL-associated domain G3DSA:3.40.1480.10|G3DSA:3.40.50.10180|PF05161|PF13660|PTHR12227|PTHR12227:SF0|SSF82544 NIDE_RS02280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002192|IPR008279|IPR013815|IPR013816 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|PEP-utilising enzyme, mobile domain|Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0003824|GO:0005524|GO:0016301|GO:0016310|GO:0016772 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PTHR22931|PTHR22931:SF7|SSF52009|SSF56059 NIDE_RS02285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003798 DNA recombination RmuC PF02646|PTHR30563 NIDE_RS02290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021130|IPR023292 NTP pyrophosphohydrolase-like domain|Phosphoribosyl-ATP pyrophosphohydrolase-like G3DSA:1.10.3420.10|PF01503|SSF101386 NIDE_RS02295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS02300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003721|IPR004821|IPR014729 Cytidyltransferase-like domain|Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004592|GO:0009058|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|PTHR21299|PTHR21299:SF1|SSF52374|TIGR00018|TIGR00125 NIDE_RS02305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|PS00794|PTHR20941|SSF55083|TIGR01498 NIDE_RS02310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424|IPR019881|IPR019942 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Diaminopimelate aminotransferase, DapL, Desulfovibrio-type|LL-diaminopimelate aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0009089|GO:0010285|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01642|PF00155|PS00105|PTHR11751|PTHR11751:SF354|SSF53383|TIGR03540 NIDE_RS02315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757|PTHR23028 NIDE_RS02320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010865 Protein of unknown function DUF1499 PF07386|PIRSF026426|PTHR34801 NIDE_RS02330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PR00164|PTHR30413|PTHR30413:SF8 NIDE_RS02335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR027417|IPR029439 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Wzt, C-terminal GO:0005524|GO:0016887 G3DSA:2.70.50.60|G3DSA:3.40.50.300|PF00005|PF14524|PTHR24220|PTHR24220:SF117|SM00382|SSF52540 NIDE_RS02350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 NIDE_RS02370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001345|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 G3DSA:3.40.50.1240|PF00300|PIRSF000709|PS00175|PTHR23029|PTHR23029:SF1|SM00855|SSF53254 NIDE_RS02375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR015943|IPR031778 Sortilin, N-terminal|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF15902|SSF110296 NIDE_RS02380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010791|IPR023374|IPR033451 AttH domain|AttH, lipocalin-like domain|AttH-like domain G3DSA:2.40.370.10|PF07143|PF17186|PTHR38591|SSF159245 NIDE_RS02385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003111|IPR015947|IPR027065 ATP-dependent protease La (LON), substrate-binding domain|Lon protease|PUA-like domain GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163 PF02190|PTHR10046|SM00464|SSF88697 NIDE_RS02390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR005894|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Daunorubicin resistance ABC transporter ATP-binding subunit DrrA|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0043215|GO:1900753 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF429|SM00382|SSF52540|TIGR01188 NIDE_RS02395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PIRSF006648|PR00164|PTHR30294|PTHR30294:SF13 NIDE_RS02400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032698 Protein SirB1, N-terminal PF13369|PTHR31350|PTHR31350:SF1 NIDE_RS02405 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|PTHR12553|SM00849|SSF56281 NIDE_RS02410 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|PTHR33164|SM00347|SSF46785 NIDE_RS02415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF13646|PTHR12697|PTHR12697:SF5|SM00567|SSF48371 NIDE_RS02420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR31302|PTHR31302:SF6|SSF56300 NIDE_RS02430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001656|IPR020103|IPR020119 Pseudouridine synthase TruD, conserved site|Pseudouridine synthase, TruD|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MF_01082|PF01142|PS01268|PTHR13326|SSF55120 NIDE_RS02435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005239|IPR007545 Conserved hypothetical protein CHP00300|LOR/SDH bifunctional enzyme, conserved domain G3DSA:2.40.420.10|G3DSA:3.40.50.10690|PF04455|TIGR00300 NIDE_RS02440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase G3DSA:3.75.10.10|PF02274|PTHR12737|PTHR12737:SF20|SSF55909 NIDE_RS02450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00394|PF01210|PF07479|PIRSF000114|PR00077|PS00957|PTHR11728|SSF48179|SSF51735 NIDE_RS02455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 G3DSA:3.40.50.7700|PF00731|PTHR23046|PTHR23046:SF3|SM01001|SSF52255 NIDE_RS02465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002822 Uncharacterised protein family UPF0272 G3DSA:3.10.20.300|G3DSA:3.30.70.1380|MF_01074|PF01969|PTHR36566|PTHR36566:SF1|TIGR00299 NIDE_RS02470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 PF01699 NIDE_RS02475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005255|IPR024084 4-hydroxythreonine-4-phosphate dehydrogenase PdxA|Isopropylmalate dehydrogenase-like domain GO:0008615|GO:0016616|GO:0050570|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_00536|PF04166|PTHR30004|PTHR30004:SF6|SSF53659|TIGR00557 NIDE_RS02485 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001737|IPR011530|IPR020596|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methylase transferase, conserved site|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PS01131|PTHR11727|SM00650|SSF53335|TIGR00755 NIDE_RS02490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002543|IPR011991|IPR018541|IPR025199|IPR027417 DNA translocase FtsK, 4TM region|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003677|GO:0005524 G3DSA:3.40.50.300|PF01580|PF09397|PF13491|PTHR22683|PTHR22683:SF41|SM00843|SSF46785|SSF52540 NIDE_RS02495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004564|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein carrier protein LolA-like G3DSA:2.50.20.10|PF03548|PTHR35869|SSF89392 NIDE_RS02500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:2.60.120.620|SSF51197 NIDE_RS02510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003018|IPR003594|IPR003660|IPR003661|IPR004358|IPR029016 GAF domain|GAF domain-like|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0005515|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF00512|PF00672|PF01590|PF02518|PR00344|PTHR24423|SM00065|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55781|SSF55874 NIDE_RS02515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007487 ABC transporter, substrate-binding protein G3DSA:3.40.50.2300|PF04392|PTHR35271 NIDE_RS02520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR001789|IPR011006|IPR013655|IPR013656 CheY-like superfamily|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction response regulator, receiver domain GO:0000160|GO:0005515 G3DSA:3.30.450.20|G3DSA:3.40.50.2300|PF00072|PF08447|PF08448|PF13426|PTHR24423|SM00086|SM00091|SM00448|SSF52172|SSF55785|TIGR00229 NIDE_RS02525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|SSF56935 NIDE_RS02530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF15|SSF56935 NIDE_RS02540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010328 Protein of unknown function DUF928 PF06051 NIDE_RS02545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010328 Protein of unknown function DUF928 PF06051 NIDE_RS02550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734|IPR024983 CHAT domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF12770|SM00028|SSF48452 NIDE_RS02555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000184|IPR013686 Bacterial surface antigen (D15)|Polypeptide-transport-associated, ShlB-type GO:0019867 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF01103|PF08479|PTHR34597|PTHR34597:SF1 NIDE_RS02560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008638|IPR011050|IPR012334 Filamentous haemagglutinin, N-terminal|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05860|SM00912|SSF51126|TIGR01901 NIDE_RS02575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) G3DSA:2.40.160.60|PF03349|PTHR35093|PTHR35093:SF2|SSF56935 NIDE_RS02580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR003018|IPR003594|IPR003661|IPR004358|IPR011006|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01590|PF02518|PR00344|PTHR24423|SM00065|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55781|SSF55874 NIDE_RS02585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 NIDE_RS02600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006638|IPR007197|IPR013580|IPR013785|IPR023885 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Proto-chlorophyllide/chlorophyllide reductase, C-terminal|Radical SAM GO:0003824|GO:0015979|GO:0015995|GO:0016491|GO:0051536|GO:0055114 G3DSA:3.20.20.70|PF04055|PF08369|PF13186|PF13353|PTHR11228|PTHR11228:SF32|SM00729|SSF102114|TIGR04085 NIDE_RS02605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004039|IPR006015|IPR006016|IPR013580|IPR014729 Proto-chlorophyllide/chlorophyllide reductase, C-terminal|Rossmann-like alpha/beta/alpha sandwich fold|Rubredoxin-type fold|Universal stress protein A|UspA GO:0006950|GO:0015979|GO:0015995|GO:0016491|GO:0055114 G3DSA:2.20.28.10|G3DSA:3.40.50.620|PF00582|PF08369|PR01438|PTHR31964|SSF52402|SSF57802 NIDE_RS02610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006638|IPR007197|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|PTHR11918|PTHR11918:SF73|SM00729|SSF102114 NIDE_RS02615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004033|IPR023576|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|UbiE/COQ5 methyltransferase|UbiE/COQ5 methyltransferase, conserved site GO:0008168 G3DSA:3.40.50.150|MF_01813|PF01209|PS01184|PTHR10108|PTHR10108:SF864|SSF53335|TIGR01934 NIDE_RS02620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR32145|PTHR32145:SF7|SM00849|SSF56281 NIDE_RS02635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR004602|IPR013815|IPR017871|IPR027417 ABC transporter, conserved site|ABC transporter-like|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|PF00005|PS00211|PTHR32282|PTHR32282:SF2|SSF52540|TIGR00630 NIDE_RS02645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007437 Putative member of DMT superfamily PF04342|PIRSF021239|PTHR38482 NIDE_RS02650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021383 Protein of unknown function DUF3015 PF11220 NIDE_RS02660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PTHR30121|SSF52540 NIDE_RS02665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR003018|IPR003594|IPR011712|IPR013655|IPR013656|IPR013767|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0005515|GO:0006355|GO:0016021|GO:0046983 G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF00989|PF01590|PF02518|PF07730|PF08447|PF08448|PF13426|PTHR24423|SM00065|SM00086|SM00091|SM00387|SSF55781|SSF55785|SSF55874|TIGR00229 NIDE_RS02670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS02675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF588|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS02680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF603|SM00448|SSF52172 NIDE_RS02685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR002641|IPR016035|IPR016181 Acyl transferase/acyl hydrolase/lysophospholipase|Acyl-CoA N-acyltransferase|GNAT domain|Patatin/Phospholipase A2-related GO:0006629|GO:0008080|GO:0008152 G3DSA:3.40.1090.10|G3DSA:3.40.630.30|PF00583|PF01734|SSF52151|SSF55729 NIDE_RS02690 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005134|IPR020761|IPR020765 Uncharacterised protein family UPF0114|Uncharacterised protein family UPF0114, bacteria|Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 MF_00143|PF03350|PTHR38596|PTHR38596:SF1|TIGR00645 NIDE_RS02705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS02710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014030|IPR014031|IPR016039|IPR020841 Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF00109|PF02801|PTHR11712|SM00825|SSF53901 NIDE_RS02725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 G3DSA:2.70.98.20|PF01179|SSF49998 NIDE_RS02750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000305|IPR001162|IPR001943|IPR004791|IPR010994|IPR027299 GIY-YIG domain|GIY-YIG nuclease superfamily|RuvA domain 2-like|UVR domain|UvrABC system, subunit C|UvrC family homology region GO:0005515|GO:0005737|GO:0006281|GO:0009380|GO:0009381 G3DSA:1.10.150.20|G3DSA:3.40.1440.10|G3DSA:4.10.860.10|MF_00203|PF01541|PF02151|PF08459|PTHR30562|PTHR30562:SF1|SM00465|SSF46600|SSF47781|SSF82771|TIGR00194 NIDE_RS02755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 G3DSA:3.10.310.10|MF_00197|PF01678|PTHR31689|SSF54506|TIGR00652 NIDE_RS02760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR21366|SSF54593 NIDE_RS02770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PTHR10587|SSF88713 NIDE_RS02775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644|IPR008915|IPR013785|IPR016483 Aldolase-type TIM barrel|CBS domain|Peptidase M50|Uncharacterised conserved protein UCP006404, peptidase M50/CBS GO:0003824|GO:0004222|GO:0006508 G3DSA:3.20.20.70|PF00571|PF02163|PIRSF006404|PTHR11911|PTHR11911:SF23|SM00116|SSF54631 NIDE_RS02780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017039 Virulence factor BrkB PF03631|PIRSF035875|PTHR30213|TIGR00765 NIDE_RS02785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001750|IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 MF_00445|PF00361|PR01434|PTHR22773|PTHR22773:SF41|TIGR01770 NIDE_RS02790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001750|IPR003918|IPR010227 NADH-quinone oxidoreductase, chain M/4|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PF00361|PR01437|PTHR22773|PTHR22773:SF40|TIGR01972 NIDE_RS02795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001516|IPR001750|IPR003945|IPR010934|IPR018393 NADH dehydrogenase subunit 5, C-terminal|NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH-plastoquinone oxidoreductase, chain 5|NADH-plastoquinone oxidoreductase, chain 5 subgroup|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 PF00361|PF00662|PF06455|PR01434|PR01435|PTHR22773|PTHR22773:SF50|TIGR01974 NIDE_RS02800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 MF_01456|PF00420|PTHR11434 NIDE_RS02805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 PF00499|PTHR33269|PTHR33269:SF1 NIDE_RS02810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010226|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 G3DSA:1.10.1060.10|MF_01351|PF12838|PS00198|PTHR10849|PTHR10849:SF13|SSF54862|TIGR01971 NIDE_RS02815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001694|IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site|NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 MF_01350|PF00146|PS00667|PS00668|PTHR11432|PTHR11432:SF3 NIDE_RS02820 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000283|IPR001041|IPR006478|IPR006656|IPR006657|IPR006963|IPR009010|IPR010228|IPR012675|IPR017900|IPR019574 2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Aspartate decarboxylase-like domain|Beta-grasp domain|Formate dehydrogenase, alpha subunit|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site|NADH:ubiquinone oxidoreductase, subunit G|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0008137|GO:0008863|GO:0009055|GO:0015942|GO:0016020|GO:0016491|GO:0016651|GO:0030151|GO:0042773|GO:0051536|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.30.70.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PF10588|PF13510|PIRSF036643|PS00198|PS00641|PS00642|PS00643|PTHR11615|PTHR11615:SF38|SM00926|SM00929|SSF50692|SSF53706|SSF54292|SSF54862|TIGR01973 NIDE_RS02825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001949|IPR011537|IPR011538|IPR019554|IPR019575 NADH ubiquinone oxidoreductase, F subunit|NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Soluble ligand binding domain GO:0008137|GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 PF01512|PF10531|PF10589|PS00644|PS00645|PTHR11780|PTHR11780:SF10|SM00928|SSF140490|SSF142019|SSF142984|TIGR01959 NIDE_RS02830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002023|IPR012336 NADH-quinone oxidoreductase subunit E-like|Thioredoxin-like fold GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF01257|PIRSF000216|PS01099|PTHR10371|SSF52833|TIGR01958 NIDE_RS02835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001135|IPR001268|IPR001501|IPR010218|IPR020396|IPR022885|IPR026662|IPR029014 NAD(P)H-quinone oxidoreductase subunit D/H|NADH dehydrogenase, subunit C|NADH-quinone oxidoreductase subunit CD|NADH-quinone oxidoreductase, subunit D|NADH:ubiquinone oxidoreductase, 30kDa subunit|NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site|NiFe hydrogenase-like|Nickel-dependent hydrogenase, large subunit GO:0008137|GO:0016151|GO:0016651|GO:0030964|GO:0048038|GO:0050136|GO:0051287|GO:0055114 G3DSA:1.10.645.10|MF_01357|MF_01358|MF_01397|PD001581|PF00329|PF00346|PF00374|PS00542|PTHR11993|PTHR11993:SF10|SSF143243|SSF56762|TIGR01961|TIGR01962 NIDE_RS02840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006137|IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit|NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0008137|GO:0048038|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.40.50.700|MF_01356|PF01058|PTHR11995|PTHR11995:SF14|SSF56770|TIGR01957 NIDE_RS02845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000440|IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid|NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0016651|GO:0055114 MF_01394|PF00507|PTHR11058|PTHR11058:SF5 NIDE_RS02850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003788|IPR029063 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA|S-adenosyl-L-methionine-dependent methyltransferase PF02636|PTHR12049|SSF53335 NIDE_RS02855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001792|IPR007024 Acylphosphatase-like domain|BLUF domain GO:0009882|GO:0071949 PF04940|SM01034|SSF54975 NIDE_RS02865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR001598|IPR011991|IPR012337|IPR025246 Integrase, catalytic core|Ribonuclease H-like domain|Transposase IS30-like HTH domain|Transposase, IS30, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0004803|GO:0006313|GO:0015074 G3DSA:1.10.10.10|G3DSA:3.30.420.10|PF00665|PF13936|PS01043|PTHR10948|SSF53098 NIDE_RS02875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024079 Metallopeptidase, catalytic domain GO:0008237 G3DSA:3.40.390.10|SSF55486 NIDE_RS02885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR020937|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|PTHR30612|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963 NIDE_RS02890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006597|IPR011990|IPR019734 Sel1-like repeat|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13414|PF14559|PTHR23083|SM00028|SM00671|SSF48452 NIDE_RS02900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011040 Sialidases G3DSA:2.120.10.10|SSF50939 NIDE_RS02915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PTHR10681|PTHR10681:SF104|SSF52833 NIDE_RS02930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011040 Sialidases G3DSA:2.120.10.10|PF13088|SSF50939 NIDE_RS02935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000866|IPR012336|IPR017937 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin, conserved site|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0045454|GO:0055114 G3DSA:3.40.30.10|PF00578|PS00194|PTHR10681|PTHR10681:SF104|SSF52833 NIDE_RS02945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|SSF56935 NIDE_RS02950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009061|IPR010093|IPR011991 Putative DNA-binding domain|SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|SSF46955|TIGR01764 NIDE_RS02955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51556 NIDE_RS02960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|SSF56935 NIDE_RS02965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001375|IPR011042|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Six-bladed beta-propeller, TolB-like GO:0006508|GO:0008236 G3DSA:2.120.10.30|G3DSA:3.40.50.1820|PF00326|PTHR11731|PTHR11731:SF140|SSF53474|SSF82171 NIDE_RS02975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|PTHR32552|PTHR32552:SF10|SSF56935|TIGR01783 NIDE_RS02980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 NIDE_RS02985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF10|SSF56935|TIGR01783 NIDE_RS02990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005625 PepSY-associated TM protein PF03929|PTHR34219 NIDE_RS02995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002898|IPR014172 MotA/TolQ/ExbB proton channel|TonB-system energizer ExbB type-2 GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625|TIGR02805 NIDE_RS03000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF3 NIDE_RS03005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|SSF56935 NIDE_RS03015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF0|SSF56935 NIDE_RS03020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002716|IPR022907|IPR029060 PIN domain|PIN domain-like|VapC family GO:0004540 G3DSA:3.40.50.1010|MF_00265|PF01850|PTHR33653|PTHR33653:SF2|SSF88723 NIDE_RS03025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010985|IPR013321 Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|SSF47598 NIDE_RS03030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005625 PepSY-associated TM protein PF03929|PTHR34219|PTHR34219:SF3 NIDE_RS03040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF10|SSF56935|TIGR01783 NIDE_RS03045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025420|IPR027417 Domain of unknown function DUF4143|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13173|PF13635|PTHR33295|PTHR33295:SF4|SSF52540 NIDE_RS03055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005625 PepSY-associated TM protein PF03929|PTHR34219 NIDE_RS03060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF15|SSF111369|TIGR01730 NIDE_RS03065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF452|SM00382|SSF52540 NIDE_RS03070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30489|PTHR30489:SF11 NIDE_RS03075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30572|PTHR30572:SF12 NIDE_RS03085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009061|IPR010093|IPR011991 Putative DNA-binding domain|SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|SSF46955|TIGR01764 NIDE_RS03090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032033 Cytochrome P460 PF16694 NIDE_RS03095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002151|IPR011990|IPR019734 Kinesin light chain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0003777|GO:0005515|GO:0005871 G3DSA:1.25.40.10|PF13374|PF13424|PR00381|PTHR19959|PTHR19959:SF135|SM00028|SSF48452 NIDE_RS03105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR031877 Metal-binding protein SmbP GO:0046872 PF16785|SSF46596 NIDE_RS03120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004658 Outer membrane lipoprotein Slp GO:0019867 PF03843|PIRSF004982|PTHR37530|TIGR00752 NIDE_RS03125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13462|SSF52833 NIDE_RS03130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001757|IPR007029|IPR008250|IPR009078|IPR018303|IPR023214|IPR023299|IPR027256 Ferritin-like superfamily|HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB|YHS domain GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PF04945|PR00119|PR00943|PS00154|PTHR24093|SSF47240|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01525 NIDE_RS03135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF00595|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF79|SM00228|SSF50156|SSF50494|TIGR02037 NIDE_RS03165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR003607|IPR006674|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF00072|PF01966|PTHR26402|SM00448|SM00471|SSF109604|SSF52172 NIDE_RS03170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002145|IPR010985|IPR013321|IPR014864|IPR022988 Arc-type ribbon-helix-helix|Nickel-responsive transcriptional regulator NikR|Ribbon-helix-helix|Ribbon-helix-helix protein, CopG|Transcription factor, NikR, nickel binding C-terminal GO:0003677|GO:0006355|GO:0010045|GO:0016151 G3DSA:1.10.1220.10|G3DSA:3.30.70.1150|MF_00476|PF01402|PF08753|PTHR34719|PTHR34719:SF2|SSF47598|SSF55021 NIDE_RS03175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024208 Protein of unknown function DUF3842 PF12953 NIDE_RS03180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF36|SSF56935 NIDE_RS03185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003180|IPR011034 Formyl transferase, C-terminal-like|Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003824|GO:0003905|GO:0006284 G3DSA:3.10.300.10|MF_00527|PF02245|PTHR10429|PTHR10429:SF0|SSF50486|TIGR00567 NIDE_RS03195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003018|IPR003594|IPR003661|IPR004358|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF01590|PF02518|PR00344|PTHR24423|PTHR24423:SF445|SM00065|SM00387|SM00388|SSF47384|SSF55781|SSF55874 NIDE_RS03200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV PF04020|PTHR37309|PTHR37309:SF1 NIDE_RS03210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS03215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007354 Carotene biosynthesis associated membrane protein PF04240|PTHR39419 NIDE_RS03220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001509|IPR016040|IPR017829 Hopanoid-associated sugar epimerase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PTHR10366|PTHR10366:SF124|SSF51735|TIGR03466 NIDE_RS03225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|PTHR12001|PTHR12001:SF23|SSF48576 NIDE_RS03230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011040 Sialidases G3DSA:2.130.10.140|SSF50939 NIDE_RS03235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF110296 NIDE_RS03240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|SM00671|SSF81901 NIDE_RS03255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|PTHR33755|PTHR33755:SF5 NIDE_RS03260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011011|IPR013083 Zinc finger, FYVE/PHD-type|Zinc finger, RING/FYVE/PHD-type G3DSA:3.30.40.10|SSF57903 NIDE_RS03295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR022606 Protein of unknown function DUF2914 PF11141 NIDE_RS03305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PTHR39188 NIDE_RS03310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001221|IPR001433|IPR001709|IPR008333|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PR00371|PR00410|PTHR19370|SSF52343|SSF63380 NIDE_RS03315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003826|IPR016067 S-adenosylmethionine decarboxylase family, prokaryotic|S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 G3DSA:3.60.90.10|PF02675|SSF56276 NIDE_RS03320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003033 SCP2 sterol-binding domain G3DSA:3.30.1050.10|PF02036|PTHR10094|SSF55718 NIDE_RS03325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866 NIDE_RS03330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|SSF111369|TIGR01730 NIDE_RS03350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012001|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 G3DSA:3.40.50.970|PF02776|SSF52518 NIDE_RS03355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PTHR18968|PTHR18968:SF81|SSF52518 NIDE_RS03360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR024169 Aminotransferase class V domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|PTHR21152|PTHR21152:SF21|SSF53383 NIDE_RS03365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025877|IPR029044 MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF12804|PTHR22572|SSF53448 NIDE_RS03370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000462|IPR029044 CDP-alcohol phosphatidyltransferase|Nucleotide-diphospho-sugar transferases GO:0008654|GO:0016020|GO:0016780 G3DSA:3.90.550.10|PF01066|PS00379|SSF53448 NIDE_RS03375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706|TIGR00374 NIDE_RS03380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF86|SSF53448 NIDE_RS03385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 NIDE_RS03390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016040|IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain|NAD(P)-binding domain G3DSA:3.40.50.2000|G3DSA:3.40.50.720|PF13439|PF13692|PTHR12526|SSF53756 NIDE_RS03395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002797|IPR029303 Polysaccharide biosynthesis protein|Polysaccharide biosynthesis protein, C-terminal domain GO:0016020 PF01943|PF14667 NIDE_RS03400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13641|PTHR22916|SSF53448 NIDE_RS03405 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018657 Domain of unknown function DUF2088 PF09861|PTHR33171|PTHR33171:SF3 NIDE_RS03410 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF13231 NIDE_RS03415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PTHR10992|SSF53474 NIDE_RS03420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS03425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003706|IPR025299 CstA, C-terminal domain|CstA, N-terminal domain GO:0009267|GO:0016020 PF02554|PF13722|PTHR30252|PTHR30252:SF3 NIDE_RS03430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007551 Protein of unknown function DUF520 G3DSA:3.30.70.860|G3DSA:3.30.70.990|MF_00632|PF04461|PTHR30476|PTHR30476:SF0|SSF89963 NIDE_RS03435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002860|IPR015943 BNR repeat|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF02012|SSF110296 NIDE_RS03445 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002312|IPR004364|IPR004365|IPR004522|IPR012340|IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Asparagine-tRNA ligase|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004816|GO:0005524|GO:0005737|GO:0006418|GO:0006421 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00534|PF00152|PF01336|PR01042|PTHR22594|PTHR22594:SF16|SSF50249|SSF55681|TIGR00457 NIDE_RS03450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|PTHR11265|PTHR11265:SF0|SSF53335|SSF81799|TIGR00006 NIDE_RS03455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PF04999 NIDE_RS03460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001460|IPR005311|IPR012338 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PTHR30627|PTHR30627:SF1|SSF56519|SSF56601 NIDE_RS03465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000713|IPR004101|IPR005761|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0016874|GO:0016881|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF4|SSF53244|SSF53623|SSF63418|TIGR01085 NIDE_RS03470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000713|IPR004101|IPR005863|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0009058|GO:0016874|GO:0047480|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_02019|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF3|SSF53244|SSF53623|SSF63418|TIGR01143 NIDE_RS03475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000715|IPR003524|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016020|GO:0016021 MF_00038|PF00953|PF10555|PS01347|PS01348|PTHR22926|PTHR22926:SF5|TIGR00445 NIDE_RS03480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004101|IPR005762|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0016874|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|PTHR23135|PTHR23135:SF2|SSF51984|SSF53244|SSF53623|TIGR01087 NIDE_RS03485 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001182|IPR013437|IPR018365 Cell cycle protein FtsW/RodA|Cell cycle, FtsW / RodA / SpoVE, conserved site|Cell division protein FtsW GO:0007049|GO:0009252|GO:0016021|GO:0051301 PF01098|PS00428|PTHR30474|PTHR30474:SF2|TIGR02614 NIDE_RS03490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0009252|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|PTHR21015|PTHR21015:SF22|SSF53756|TIGR01133 NIDE_RS03495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000713|IPR004101|IPR005758|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramate--L-alanine ligase GO:0005524|GO:0008763|GO:0009058|GO:0009252|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00046|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF5|SSF51984|SSF53244|SSF53623|TIGR01082 NIDE_RS03500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003170|IPR006094|IPR011601|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|PTHR21071|PTHR21071:SF4|SSF56176|SSF56194|TIGR00179 NIDE_RS03505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PS00843|PS00844|PTHR23132|PTHR23132:SF0|SSF52440|SSF56059|TIGR01205 NIDE_RS03510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013685 Polypeptide-transport-associated, FtsQ-type PF08478|PTHR37820 NIDE_RS03515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003494|IPR020823 Cell division protein FtsA|SHS2 domain inserted in FtsA GO:0005515|GO:0007049 G3DSA:3.30.1490.110|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_02033|PF02491|PF14450|PIRSF003101|PTHR32432|PTHR32432:SF4|SM00842|SSF53067|TIGR01174 NIDE_RS03520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000158|IPR003008|IPR008280|IPR018316|IPR020805|IPR024757 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Cell division protein FtsZ, conserved site|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain GO:0003924|GO:0005525|GO:0005737 G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PS01134|PS01135|PTHR30314|PTHR30314:SF3|SM00864|SM00865|SSF52490|SSF55307|TIGR00065 NIDE_RS03525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003730|IPR011324 Cytotoxic necrotizing factor-like, catalytic|Multi-copper polyphenol oxidoreductase, laccase G3DSA:3.60.140.10|PF02578|PTHR30616|SSF64438|TIGR00726 NIDE_RS03530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Uncharacterised protein family UPF0001 G3DSA:3.20.20.10|PF01168|PIRSF004848|PS01211|PTHR10146|SSF51419|TIGR00044 NIDE_RS03535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000304|IPR008927|IPR016040|IPR028939|IPR029036 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Pyrroline-5-carboxylate reductase|Pyrroline-5-carboxylate reductase, catalytic, N-terminal|Pyrroline-5-carboxylate reductase, dimerisation domain GO:0004735|GO:0006561|GO:0055114 G3DSA:1.10.3730.10|G3DSA:3.40.50.720|MF_01925|PF03807|PF14748|PIRSF000193|PS00521|PTHR11645|PTHR11645:SF28|SSF48179|SSF51735|TIGR00112 NIDE_RS03540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003425 CCB3/YggT GO:0016020 PF02325|PTHR33219|PTHR33219:SF5 NIDE_RS03545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007793|IPR019933 DivIVA domain|DivIVA family PF05103|PTHR35794|PTHR35794:SF2|TIGR03544 NIDE_RS03550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|PTHR22935|PTHR22935:SF10|SSF56601 NIDE_RS03560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 PF01066|PIRSF000847|PS00379|PTHR14269 NIDE_RS03565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001992|IPR003004|IPR018076 GspF/PilC family|Type II secretion system F domain|Type II secretion system conserved site GO:0009306|GO:0016020 PF00482|PR00812|PS00874|PTHR30012|PTHR30012:SF0 NIDE_RS03570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF13426|PR00344|PTHR24423|PTHR24423:SF445|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS03575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS03580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004424|IPR006204|IPR013750|IPR014721|IPR020568 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PF08544|PIRSF010376|PTHR20861|PTHR20861:SF2|SSF54211|SSF55060|TIGR00154 NIDE_RS03585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000842|IPR005946|IPR029057|IPR029099 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|MF_00583_B|PF13793|PF14572|PS00114|PTHR10210|PTHR10210:SF41|SM01400|SSF53271|TIGR01251 NIDE_RS03590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001021|IPR011035|IPR020056|IPR020057|IPR029751 Ribosomal protein L25|Ribosomal protein L25, beta domain|Ribosomal protein L25, long-form|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain GO:0003735|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.170.120.20|G3DSA:2.40.240.10|MF_01334|PD012503|PF01386|PF14693|PTHR33284|SSF50715|TIGR00731 NIDE_RS03595 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001328|IPR018171 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01195|PS01196|PTHR17224|SSF53178|TIGR00447 NIDE_RS03600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000898 Indoleamine 2,3-dioxygenase GO:0020037 PF01231|PTHR28657|SSF140959 NIDE_RS03620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000529|IPR014717|IPR020814 Ribosomal protein S6|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|PTHR21011|SSF54995|TIGR00166 NIDE_RS03625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PIRSF002070|PTHR10302|SSF50249|TIGR00621 NIDE_RS03630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001648|IPR018275 Ribosomal protein S18|Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|PS00057|PTHR13479|SSF46911|TIGR00165 NIDE_RS03635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003772 Protein of unknown function DUF177 PF02620|PTHR34374 NIDE_RS03640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003664|IPR012281|IPR024084 Fatty acid synthesis PlsX protein|Isopropylmalate dehydrogenase-like domain|Phospholipid biosynthesis protein, PlsX-like GO:0003824|GO:0006633|GO:0016616|GO:0016747|GO:0055114 G3DSA:3.40.718.10|MF_00019|PF02504|PIRSF002465|PTHR30100|PTHR30100:SF1|SSF53659|TIGR00182 NIDE_RS03645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|PTHR18919|PTHR18919:SF109|SSF53901|TIGR00747 NIDE_RS03650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001227|IPR004410|IPR014043|IPR016035|IPR016036|IPR020801|IPR024925 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl CoA-acyl carrier protein transacylase, FabD-type|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0004314|GO:0008152|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|PIRSF000446|PTHR10982|SM00827|SSF52151|SSF55048|TIGR00128 NIDE_RS03655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR011284|IPR016040|IPR020904 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0004316|GO:0006633|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF328|SM00822|SSF51735|TIGR01830 NIDE_RS03660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003231|IPR006162|IPR009081|IPR020806 Acyl carrier protein (ACP)|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain GO:0006633|GO:0031177 G3DSA:1.10.1200.10|MF_01217|PF00550|PS00012|PTHR20863|SM00823|SSF47336|TIGR00517 NIDE_RS03665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|PTHR11712|SM00825|SSF53901|TIGR03150 NIDE_RS03670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000999|IPR011907|IPR014720 Double-stranded RNA-binding domain|Ribonuclease III|Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396|GO:0016075 G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF14622|PS00517|PTHR11207|SM00358|SM00535|SSF54768|SSF69065|TIGR02191 NIDE_RS03675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PR00153|PS00170|PTHR11071|SSF50891 NIDE_RS03685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002509|IPR011330|IPR014344|IPR022560 Domain of unknown function DUF3473|Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain|PEP-CTERM locus, polysaccharide deactylase GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PF11959|PTHR10587|PTHR10587:SF85|SSF88713|TIGR03006 NIDE_RS03690 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF491|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 NIDE_RS03700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013702|IPR019494 FIST domain, N-terminal|FIST, C-domain PF08495|PF10442|PTHR40252|PTHR40252:SF1|SM00897|SM01204 NIDE_RS03715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011042 Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|SSF101898 NIDE_RS03720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000672|IPR016040|IPR020630|IPR020631|IPR020867 NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0004488|GO:0009396|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00767|PTHR10025|SSF51735|SSF53223 NIDE_RS03725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003171|IPR029041 FAD-linked oxidoreductase-like|Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 G3DSA:3.20.20.220|PF02219|SSF51730 NIDE_RS03730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|PTHR20881|SSF51621|TIGR00222 NIDE_RS03740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004617|IPR004843|IPR029052 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0008803|GO:0016787 G3DSA:3.60.21.10|PF00149|PIRSF000903|PTHR24032|PTHR24032:SF27|SSF56300|TIGR00668 NIDE_RS03755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006|IPR029151 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Periplasmic sensor domain-like|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01627|PF02518|PR00344|PTHR24423|PTHR24423:SF382|SM00387|SM00388|SM00448|SSF103190|SSF47226|SSF47384|SSF52172|SSF55874 NIDE_RS03760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008972|IPR013784|IPR014766 Carbohydrate-binding-like fold|Carboxypeptidase, regulatory domain|Cupredoxin GO:0030246 G3DSA:2.60.40.1120|G3DSA:2.60.40.420|SSF49452|SSF49503 NIDE_RS03765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS03770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF56935 NIDE_RS03775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016856|IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF|NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0033739|GO:0046857|GO:0055114 G3DSA:3.30.1130.10|MF_00818|PF14489|PTHR34354|PTHR34354:SF1|SSF55620|TIGR03139 NIDE_RS03780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PTHR32154|PTHR32154:SF4|SSF52518 NIDE_RS03785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002869|IPR011894|IPR019752 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016491|GO:0016625|GO:0016903|GO:0055114 G3DSA:3.40.920.10|PF01558|PTHR32154|PTHR32154:SF2|SSF53323|TIGR02175 NIDE_RS03790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:3.30.70.20|SSF54862 NIDE_RS03795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003704 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit GO:0019385 PF02552 NIDE_RS03800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002880|IPR009014|IPR029061|IPR033412 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF01855|PF17147|PTHR32154|PTHR32154:SF21|SSF52518|SSF52922 NIDE_RS03810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR015324|IPR029063 Ribosomal protein Rsm22, bacterial-type|S-adenosyl-L-methionine-dependent methyltransferase GO:0006412|GO:0008168 G3DSA:3.40.50.150|PF09243|SSF53335 NIDE_RS03825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000340|IPR020422|IPR024950|IPR029021 Dual specificity phosphatase|Dual specificity phosphatase, catalytic domain|Dual specificity protein phosphatase domain|Protein-tyrosine phosphatase-like GO:0006470|GO:0008138 G3DSA:3.90.190.10|PF00782|PTHR10159|SM00195|SSF52799 NIDE_RS03830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010663|IPR010979|IPR012319|IPR015886|IPR015887|IPR020629 DNA glycosylase/AP lyase, H2TH DNA-binding|DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site|Formamidopyrimidine-DNA glycosylase|Formamidopyrimidine-DNA glycosylase, catalytic domain|Ribosomal protein S13-like, H2TH|Zinc finger, FPG/IleRS-type GO:0003676|GO:0003677|GO:0003684|GO:0003906|GO:0006281|GO:0006284|GO:0006289|GO:0008270|GO:0008534|GO:0016799 G3DSA:1.10.8.50|G3DSA:3.20.190.10|PF01149|PF06827|PF06831|PS01242|PTHR22993|PTHR22993:SF15|SM00898|SM01232|SSF46946|SSF57716|SSF81624|TIGR00577 NIDE_RS03835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005809|IPR013650|IPR013816|IPR016102|IPR017866|IPR032263 ATP-citrate synthase, citrate-binding domain|ATP-grasp fold, subdomain 2|ATP-grasp fold, succinyl-CoA synthetase-type|Succinyl-CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0008152 G3DSA:3.30.470.20|G3DSA:3.40.50.261|PF08442|PF16114|PIRSF001554|PS01217|PTHR23118|PTHR23118:SF0|SSF52210|SSF56059 NIDE_RS03840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002020|IPR005810|IPR005811|IPR016040|IPR016102|IPR016142|IPR016143 ATP-citrate lyase/succinyl-CoA ligase|Citrate synthase|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0008152|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF00285|PF00549|PR01798|PTHR23118|PTHR23118:SF8|SSF48256|SSF51735 NIDE_RS03845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000573|IPR001030|IPR006248|IPR015928|IPR015931|IPR015932|IPR015937|IPR018136 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase family, 4Fe-4S cluster binding site|Aconitase, mitochondrial-like|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase GO:0003994|GO:0006099|GO:0008152|GO:0051539 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF00694|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF30|SSF52016|SSF53732|TIGR01340 NIDE_RS03850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004436|IPR024084 Isocitrate dehydrogenase NADP-dependent, monomeric|Isopropylmalate dehydrogenase-like domain GO:0004450|GO:0006099|GO:0016616|GO:0055114 G3DSA:3.40.718.10|PF03971|PIRSF009407|PTHR36999|SSF53659|TIGR00178 NIDE_RS03855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001041|IPR006058|IPR009051|IPR012675|IPR017900 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|G3DSA:3.30.70.20|PF13510|PS00197|PS00198|SSF46548|SSF54292 NIDE_RS03860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003953|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PR00368|PTHR11632|SSF51905|SSF56425 NIDE_RS03865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR013816|IPR016102 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|ATP-grasp fold, succinyl-CoA synthetase-type|Succinyl-CoA synthetase, beta subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0008152 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|MF_00558|PF00549|PF08442|PIRSF001554|PTHR11815|SSF52210|SSF56059|TIGR01016 NIDE_RS03870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003781|IPR005810|IPR005811|IPR016040|IPR016102|IPR017440 ATP-citrate lyase/succinyl-CoA ligase|ATP-citrate lyase/succinyl-CoA ligase, active site|CoA-binding|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0008152|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF00549|PF02629|PIRSF001553|PR01798|PS00399|PS01216|PTHR11117|SM00881|SSF51735|SSF52210|TIGR01019 NIDE_RS03875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006158|IPR006638|IPR007197|IPR023404|IPR023970 Cobalamin (vitamin B12)-binding domain|Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.40.50.280|G3DSA:3.80.30.20|PF02310|PF04055|PTHR11918|PTHR11918:SF64|SM00729|SSF102114|SSF52242 NIDE_RS03880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000043|IPR015878|IPR016040|IPR020082 Adenosylhomocysteinase|NAD(P)-binding domain|S-adenosyl-L-homocysteine hydrolase, NAD binding domain|S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 G3DSA:3.40.50.1480|G3DSA:3.40.50.720|MF_00563|PF00670|PF05221|PIRSF001109|PS00738|PS00739|PTHR23420|SM00996|SM00997|SSF51735|SSF52283|TIGR00936 NIDE_RS03885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|PTHR11964|SSF55973|TIGR01034 NIDE_RS03890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007816 ResB-like domain PF05140|PTHR31566|PTHR31566:SF0 NIDE_RS03895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002541|IPR017562 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein CcsA GO:0017004|GO:0020037 PF01578|PTHR30071|PTHR30071:SF5|TIGR03144 NIDE_RS03900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PTHR10681|SSF52833 NIDE_RS03905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000866|IPR012336|IPR017937 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin, conserved site|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0045454|GO:0055114 G3DSA:3.40.30.10|PF00578|PS00194|PTHR10681|PTHR10681:SF104|SSF52833 NIDE_RS03910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PF02683|PTHR31272|PTHR31272:SF4 NIDE_RS03915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002938|IPR011777|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Geranylgeranyl reductase family GO:0016491|GO:0016628|GO:0055114|GO:0071949 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01494|PR00420|PTHR10617|PTHR10617:SF101|SSF51905|TIGR02032 NIDE_RS03925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|PTHR34069|PTHR34069:SF2|SSF53901|TIGR00747 NIDE_RS03930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018445 Putative phosphate transport regulator PF01865|PTHR37298 NIDE_RS03935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 PF01384|PTHR11101 NIDE_RS03940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR003594|IPR003660|IPR003661|IPR004358|IPR013767 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0006355|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00672|PF00989|PF02518|PR00344|PTHR24423|SM00091|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS03945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF614|SM00448|SM00862|SSF46894|SSF52172 NIDE_RS03950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 MF_00191|PF02401|PTHR30426|TIGR00216 NIDE_RS03955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003395|IPR010935|IPR011890|IPR024704|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal|SMCs flexible hinge|Structural maintenance of chromosomes protein|Structural maintenance of chromosomes protein, prokaryotic GO:0005515|GO:0005524|GO:0005694|GO:0007062|GO:0030261|GO:0051276 G3DSA:3.40.50.300|MF_01894|PF02463|PF06470|PIRSF005719|PTHR18937|PTHR18937:SF261|SM00968|SSF52540|SSF75553|TIGR02168 NIDE_RS03960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002365|IPR006400|IPR008930|IPR018333|IPR032696|IPR032697 Squalene cyclase|Squalene cyclase, C-terminal|Squalene cyclase, N-terminal|Squalene hopene cyclase|Terpene synthase, conserved site|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0016866|GO:0019746 G3DSA:1.50.10.20|PF13243|PF13249|PS01074|PTHR11764|PTHR11764:SF12|SSF48239|TIGR01507|TIGR01787 NIDE_RS03965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PF01048|SSF53167 NIDE_RS03970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE GO:0006810|GO:0043190 PF02405|PTHR30188|PTHR30188:SF4|TIGR00056 NIDE_RS03975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF567|SM00382|SSF52540 NIDE_RS03980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003399|IPR030970 Mce/MlaD|Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 PF02470|PTHR33371|TIGR04430 NIDE_RS03985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008869|IPR023094|IPR032710 NTF2-like domain|Toluene tolerance Ttg2/phospholipid-binding protein MlaC|Toluene tolerance protein, alpha-helical G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494|PIRSF004649|PTHR36573 NIDE_RS03990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000184 Bacterial surface antigen (D15) GO:0019867 G3DSA:2.40.160.50|PF01103|PTHR12815|PTHR12815:SF11 NIDE_RS03995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021523 Protein of unknown function DUF3187 PF11383 NIDE_RS04000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005474|IPR005475|IPR005477|IPR009014|IPR029061|IPR033247|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PTHR11624|PTHR11624:SF20|SM00861|SSF52518|SSF52922|TIGR00204 NIDE_RS04005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004588|IPR016425|IPR029065 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type|Enolase C-terminal domain-like GO:0005506|GO:0008299|GO:0016114|GO:0046429|GO:0055114 G3DSA:3.20.20.120|MF_00159|PF04551|PIRSF004640|PTHR30454|SSF51604|SSF56014|TIGR00612 NIDE_RS04015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003148|IPR006153|IPR016040 Cation/H+ exchanger|NAD(P)-binding domain|Regulator of K+ conductance, N-terminal GO:0006812|GO:0006813|GO:0015299|GO:0016021|GO:0055085 G3DSA:3.40.50.720|PF00999|PF02254|PTHR16254|SSF51735 NIDE_RS04025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 NIDE_RS04035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ PF03023 NIDE_RS04040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|SSF52266 NIDE_RS04045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:3.40.50.2000|PF13692|SSF53756 NIDE_RS04055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003696|IPR031730 Carbamoyltransferase|Carbamoyltransferase, C-terminal GO:0003824|GO:0009058 PF02543|PF16861|PTHR34847 NIDE_RS04065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 NIDE_RS04070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 NIDE_RS04075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF3|SSF53383 NIDE_RS04080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003362 Bacterial sugar transferase PF02397|PTHR30576 NIDE_RS04085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003869|IPR016040 NAD(P)-binding domain|Polysaccharide biosynthesis protein, CapD-like domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF02719|PF13727|PTHR10366|PTHR10366:SF256|SM00822|SSF51735 NIDE_RS04090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR026950 Capsule assembly protein Wzi PF14052 NIDE_RS04095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003715|IPR010425|IPR019554 Domain of unknown function DUF1017|Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF06251|PF10531|PTHR33619|PTHR33619:SF1|SSF142984 NIDE_RS04100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003856|IPR032807 Lipopolysaccharide biosynthesis|Tyrosine kinase, G-rich domain GO:0009103|GO:0016020 PF02706|PF13807|PTHR32309|PTHR32309:SF13 NIDE_RS04105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007197|IPR013785|IPR017833|IPR022563 Aldolase-type TIM barrel|Domain of unknown function DUF3463|Hopanoid biosynthesis associated radical SAM protein HpnH|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF11946|PF13394|PTHR11228|PTHR11228:SF22|SSF102114|TIGR03470 NIDE_RS04115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008969|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain G3DSA:2.60.40.1120|SSF49464 NIDE_RS04120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS04130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 NIDE_RS04135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005805|IPR011033|IPR017941 PRC-barrel-like|Rieske [2Fe-2S] iron-sulphur domain|Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PR00162|SSF50022|SSF50346 NIDE_RS04140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005798|IPR016174|IPR027387 Cytochrome b/b6, C-terminal|Cytochrome b/b6-like domain|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016491|GO:0022904 G3DSA:1.20.810.10|PF00032|PF00033|PTHR19271|SSF81342|SSF81648 NIDE_RS04150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654 NIDE_RS04155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 NIDE_RS04160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS04165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 PF09459 NIDE_RS04175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000537|IPR006370|IPR030470|IPR031103 4-hydroxybenzoate octaprenyltransferase|4-hydroxybenzoate polyprenyltransferase|UbiA prenyltransferase conserved site|UbiA prenyltransferase family GO:0004659|GO:0006744|GO:0016021 MF_01635|PF01040|PS00943|PTHR11048|TIGR01474 NIDE_RS04195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009003|IPR033116 Peptidase S1, PA clan|Serine proteases, trypsin family, serine active site G3DSA:2.40.10.10|PF13365|PS00135|SSF50494 NIDE_RS04200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 NIDE_RS04210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029045 ClpP/crotonase-like domain G3DSA:3.90.226.10|SSF52096 NIDE_RS04240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000719|IPR007822|IPR011009 Lanthionine synthetase C-like|Protein kinase domain|Protein kinase-like domain GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|PF00069|PF05147|PR01950|SM00220|SM01260|SSF158745|SSF56112 NIDE_RS04245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008775 Phytanoyl-CoA dioxygenase G3DSA:2.60.120.620|PF05721|PTHR20883|PTHR20883:SF5|SSF51197 NIDE_RS04250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|PTHR30468|PTHR30468:SF18|SSF51197 NIDE_RS04285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS04295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008928|IPR012341 Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|SSF48208 NIDE_RS04300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018584 Glycosyltransferase family 87 GO:0016758 PF09594 NIDE_RS04305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005754|IPR022445|IPR023365 Sortase domain|Sortase family|Sortase, proteobacterial type PF04203|PTHR33393|PTHR33393:SF5|SSF63817|TIGR01076|TIGR03784 NIDE_RS04310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002035|IPR013694|IPR022440 Conserved hypothetical protein CHP03788|VIT domain|von Willebrand factor, type A G3DSA:3.40.50.410|PF08487|PF13768|PTHR10338|PTHR10338:SF95|SM00327|SM00609|SSF53300|TIGR03788 NIDE_RS04325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002052|IPR007848|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF05175|PS00092|PTHR18895|SSF53335 NIDE_RS04335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006597|IPR011990|IPR019734 Sel1-like repeat|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|PF13414|PTHR23083|SM00028|SM00671|SSF48452|SSF81901 NIDE_RS04345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001310|IPR011146 HIT-like domain|Histidine triad (HIT) protein GO:0003824 G3DSA:3.30.428.10|PF01230|PTHR23089|PTHR23089:SF13|SSF54197 NIDE_RS04360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001602 Uncharacterised protein family UPF0047 G3DSA:2.60.120.460|PF01894|PIRSF004681|PTHR30615|SSF111038|TIGR00149 NIDE_RS04365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF81|SM00228|SSF50156|SSF50494 NIDE_RS04370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR003959|IPR003960|IPR027417|IPR032501 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Proteasomal ATPase, OB/ID domain GO:0005524 G3DSA:3.40.50.300|PF00004|PF16450|PS00674|PTHR23077|SM00382|SSF52540 NIDE_RS04375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 PF03136|PTHR42307 NIDE_RS04385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001353|IPR029055 Nucleophile aminohydrolases, N-terminal|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 G3DSA:3.60.20.10|PF00227|PTHR11599|PTHR11599:SF58|SSF56235 NIDE_RS04395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 PF03136|PTHR42307 NIDE_RS04410 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003157|IPR009875|IPR025714|IPR029058|IPR029063 Acyl transferase, LuxD|Alpha/Beta hydrolase fold|Methyltransferase domain|PilZ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0006631|GO:0016746|GO:0035438 G3DSA:3.40.50.150|G3DSA:3.40.50.1820|PF02273|PF07238|PF13847|PTHR10108|PTHR10108:SF779|SSF141371|SSF53335|SSF53474 NIDE_RS04415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003018|IPR003594|IPR003661|IPR004358|IPR029016|IPR031621 GAF domain|GAF domain-like|Histidine kinase, N-terminal 7TM region|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF00512|PF02518|PF13185|PF16927|PR00344|PTHR24423|PTHR24423:SF445|SM00065|SM00387|SM00388|SSF47384|SSF55781|SSF55874 NIDE_RS04420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000073|IPR012020|IPR029058 AB hydrolase 4 family|Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PIRSF005211|PR00111|PTHR10794|SSF53474 NIDE_RS04425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|PTHR22789|SM01007|SSF53639 NIDE_RS04440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:3.30.70.20|SSF54862 NIDE_RS04445 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002869|IPR011894|IPR019752 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016491|GO:0016625|GO:0016903|GO:0055114 G3DSA:3.40.920.10|PF01558|PTHR32154|PTHR32154:SF2|SSF53323|TIGR02175 NIDE_RS04450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PTHR32154|PTHR32154:SF4|SSF52518 NIDE_RS04455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002880|IPR009014|IPR029061|IPR033412 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF01855|PF17147|PTHR32154|PTHR32154:SF21|SSF52518|SSF52922 NIDE_RS04460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003704|IPR013210|IPR029035 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit|DHS-like NAD/FAD-binding domain|Leucine-rich repeat-containing N-terminal, plant-type GO:0019385 PF02552|PF08263|SSF52467 NIDE_RS04465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|PTHR33606|SSF54909 NIDE_RS04470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018699 Protein of unknown function DUF2203 PF09969|PIRSF016498 NIDE_RS04475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000194|IPR003593|IPR004665|IPR011112|IPR011113|IPR011129|IPR012340|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock protein|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, N-terminal|Rho termination factor, RNA-binding|Transcription termination factor Rho GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:1.10.720.10|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|PF07498|PTHR15184|PTHR15184:SF34|SM00357|SM00382|SM00959|SSF50249|SSF52540|SSF68912|TIGR00767 NIDE_RS04480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002150|IPR027491 Ribosomal protein L31|Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00501|PF01197|PR01249|PS01143|PTHR33280|PTHR33280:SF2|SSF143800|TIGR00105 NIDE_RS04485 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000352|IPR004373|IPR005139|IPR014720 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00093|PF00472|PF03462|PTHR11075|PTHR11075:SF9|SM00937|SSF75620|TIGR00019 NIDE_RS04490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002052|IPR004556|IPR007848|IPR019874|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02126|PF05175|PS00092|PTHR18895|PTHR18895:SF64|SSF53335|TIGR00536|TIGR03534 NIDE_RS04495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001986|IPR005750|IPR013792 Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|MF_00111|PF00275|PTHR21090|PTHR21090:SF19|SSF55205|TIGR01072 NIDE_RS04500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001348|IPR013820|IPR018198|IPR024893 ATP phosphoribosyltransferase HisG|ATP phosphoribosyltransferase HisG, short form|ATP phosphoribosyltransferase, catalytic domain|ATP phosphoribosyltransferase, conserved site GO:0000105|GO:0003879|GO:0005737 G3DSA:3.40.190.10|MF_01018|PF01634|PS01316|PTHR21403|PTHR21403:SF3|SSF53850|TIGR00070 NIDE_RS04505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012131|IPR016161|IPR022695 Aldehyde/histidinol dehydrogenase|Histidinol dehydrogenase|Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008152|GO:0008270|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.1980|MF_01024|PF00815|PIRSF000099|PR00083|PTHR21256|SSF53720|TIGR00069 NIDE_RS04510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000807|IPR020565|IPR020568 Imidazoleglycerol-phosphate dehydratase|Imidazoleglycerol-phosphate dehydratase, conserved site|Ribosomal protein S5 domain 2-type fold GO:0000105|GO:0004424 G3DSA:3.30.230.40|MF_00076|PF00475|PS00954|PS00955|PTHR23133|PTHR23133:SF2|SSF54211 NIDE_RS04515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010139|IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase|Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 G3DSA:3.40.50.880|MF_00278|PF00117|PIRSF000495|PTHR21235|PTHR21235:SF1|SSF52317|TIGR01855 NIDE_RS04525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006062|IPR006063|IPR011060|IPR013785|IPR023016 Aldolase-type TIM barrel|Histidine biosynthesis|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA|Ribulose-phosphate binding barrel GO:0000105|GO:0003824|GO:0003949|GO:0008152 G3DSA:3.20.20.70|MF_01014|PF00977|PTHR21235|PTHR21235:SF15|SSF51366|TIGR00007 NIDE_RS04530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004651|IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Histidine biosynthesis, HisF|Ribulose-phosphate binding barrel GO:0000105|GO:0000107|GO:0003824|GO:0005737|GO:0008152 G3DSA:3.20.20.70|MF_01013|PF00977|PTHR21235|PTHR21235:SF2|SSF51366|TIGR00735 NIDE_RS04535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002496|IPR008179|IPR021130|IPR023019 Histidine biosynthesis bifunctional protein HisIE|Phosphoribosyl-AMP cyclohydrolase domain|Phosphoribosyl-ATP pyrophosphohydrolase|Phosphoribosyl-ATP pyrophosphohydrolase-like GO:0000105|GO:0004635|GO:0004636 G3DSA:1.10.287.1080|MF_01019|MF_01020|PD002610|PF01502|PF01503|PTHR21256|SSF101386|SSF141734|TIGR03188 NIDE_RS04540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001310|IPR011146|IPR019808 HIT-like domain|Histidine triad (HIT) protein|Histidine triad, conserved site GO:0003824 G3DSA:3.30.428.10|PF01230|PR00332|PS00892|PTHR23089|PTHR23089:SF2|SSF54197 NIDE_RS04545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002694|IPR006171|IPR006295|IPR013264|IPR019475|IPR030846 DNA primase DnaG, bacteria|DNA primase, DnaB-helicase binding domain|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|Toprim domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270|GO:0016779 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF10410|PF13662|PIRSF002811|PTHR30313|SM00400|SM00493|SSF56731|SSF57783|TIGR01391 NIDE_RS04550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000943|IPR007127|IPR007624|IPR007627|IPR007630|IPR007631|IPR009042|IPR011991|IPR012760|IPR013324|IPR013325|IPR014284|IPR028630 RNA polymerase sigma factor 70, non-essential domain|RNA polymerase sigma factor 70, region 1.1|RNA polymerase sigma factor RpoD|RNA polymerase sigma factor RpoD, C-terminal|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00963|PF00140|PF03979|PF04539|PF04542|PF04545|PF04546|PR00046|PS00715|PS00716|PTHR30603|PTHR30603:SF0|SSF88659|SSF88946|TIGR02393|TIGR02937 NIDE_RS04560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003743 C4-type zinc ribbon domain PF02591|PTHR39082 NIDE_RS04565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001352|IPR004641|IPR012337|IPR024567 Ribonuclease H-like domain|Ribonuclease HII/HIII|Ribonuclease HII/HIII domain|Ribonuclease HIII GO:0003676|GO:0003723|GO:0004523|GO:0005737|GO:0016070 G3DSA:3.30.420.10|PF01351|PTHR10954|PTHR10954:SF12|SSF53098|TIGR00716 NIDE_RS04570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR22726|PTHR22726:SF1 NIDE_RS04575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023614 Porin domain G3DSA:2.40.160.10|SSF56935 NIDE_RS04580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008554|IPR012336 Glutaredoxin-like|Thioredoxin-like fold G3DSA:3.40.30.10|PF05768|SSF52833 NIDE_RS04585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|PTHR18968:SF116|SSF52467|SSF52518|TIGR00118 NIDE_RS04590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004789|IPR019455 Acetolactate synthase, small subunit|Acetolactate synthase, small subunit, C-terminal GO:0003984|GO:0009082 G3DSA:3.30.70.1150|G3DSA:3.30.70.260|PD002844|PF10369|PF13710|PTHR30239|SSF55021|TIGR00119 NIDE_RS04595 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR016040|IPR023753 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Acetohydroxy acid isomeroreductase C-terminal|Acetohydroxy acid isomeroreductase, NADPH-binding domain|FAD/NAD(P)-binding domain|Ketol-acid reductoisomerase|NAD(P)-binding domain GO:0004455|GO:0009082|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.50.50.60|MF_00435|PF01450|PF07991|PTHR21371|SSF48179|SSF51735|TIGR00465 NIDE_RS04600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003817|IPR033175 Phosphatidylserine decarboxylase, archaeal-type|Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 MF_00664|PF02666|PTHR35809|TIGR00164 NIDE_RS04605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000462|IPR004533 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--serine O-phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066|PS00379|PTHR15362|PTHR15362:SF5|TIGR00473 NIDE_RS04615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000891|IPR002034|IPR005671|IPR013709|IPR013785 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|2-isopropylmalate synthase, bacterial-type|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|MF_01025|PF00682|PF08502|PS00815|PS00816|PTHR10277|PTHR10277:SF9|SM00917|SSF110921|SSF51569|TIGR00973 NIDE_RS04620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|PTHR36114|PTHR36114:SF1|SSF51182 NIDE_RS04625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001804|IPR004429|IPR019818|IPR024084 Isocitrate and isopropylmalate dehydrogenases family|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_01033|PF00180|PS00470|PTHR11835|PTHR11835:SF35|SM01329|SSF53659|TIGR00169 NIDE_RS04630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001258|IPR011042 NHL repeat|Six-bladed beta-propeller, TolB-like GO:0005515 G3DSA:2.120.10.30|PF01436|PTHR24103|PTHR24103:SF378|SSF101898 NIDE_RS04635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000534|IPR005986|IPR012080|IPR012280|IPR016040 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, beta-type|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0004073|GO:0005737|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|PTHR10174|PTHR10174:SF2|SM00859|SSF51735|SSF55347|TIGR01296 NIDE_RS04640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021320 Protein of unknown function DUF2905 PF11146|PTHR36443|PTHR36443:SF1 NIDE_RS04645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013486|IPR013693 Sporulation stage II protein D, amidase enhancer LytB|Sporulation stage II protein D, amidase enhancer LytB N-terminal GO:0030435 PD191273|PF08486|PTHR30032|PTHR30032:SF4|TIGR02669 NIDE_RS04650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 G3DSA:2.40.10.240|G3DSA:3.40.1780.10|MF_00113|PF02547|PTHR30307|PTHR30307:SF0|SSF111337|TIGR00113 NIDE_RS04655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027304 Trigger factor/SurA domain PF13624|PTHR10657|PTHR10657:SF11|SSF109998 NIDE_RS04660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010432 RDD PF06271 NIDE_RS04665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004000|IPR004753 Actin family|Cell shape determining protein MreB/Mrl GO:0000902 G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF06723|PR01652|PTHR19375|PTHR19375:SF117|SM00268|SSF53067|TIGR00904 NIDE_RS04670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007221 Rod shape-determining protein MreC GO:0008360 PF04085|PIRSF038471|PTHR34138|PTHR34138:SF1|TIGR00219 NIDE_RS04680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001460|IPR005311|IPR012338|IPR017790 Beta-lactamase/transpeptidase-like|Penicillin-binding protein 2|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658|GO:0016020 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PTHR30627|PTHR30627:SF2|SSF56519|SSF56601|TIGR03423 NIDE_RS04685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001182|IPR011923|IPR018365 Cell cycle protein FtsW/RodA|Cell cycle, FtsW / RodA / SpoVE, conserved site|Rod shape-determining protein RodA GO:0007049|GO:0008360|GO:0016021|GO:0051301 PF01098|PS00428|PTHR30474|PTHR30474:SF1|TIGR02210 NIDE_RS04690 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003029|IPR004659|IPR012340|IPR019307|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E/G|S1 domain GO:0003676|GO:0003723|GO:0004540|GO:0006396 G3DSA:2.40.50.140|PF00575|PF10150|PTHR30001|PTHR30001:SF0|SM00316|SSF50249|TIGR00757 NIDE_RS04695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003488|IPR010994 DNA recombination-mediator protein A|RuvA domain 2-like GO:0009294 G3DSA:1.10.150.20|G3DSA:3.40.50.450|PF02481|PTHR32039|PTHR32039:SF8|SSF102405|SSF47781|TIGR00732 NIDE_RS04700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000380|IPR003601|IPR003602|IPR005733|IPR006171|IPR013497|IPR013498|IPR013824|IPR013825|IPR023405|IPR023406|IPR028612 DNA topoisomerase I, bacterial-type|DNA topoisomerase I, type IA|DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|DNA topoisomerase, type IA, zn finger|Toprim domain GO:0003677|GO:0003916|GO:0003917|GO:0005694|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.30.65.10|G3DSA:3.40.50.140|MF_00952|PF01131|PF01396|PF01751|PR00417|PS00396|PTHR11390|PTHR11390:SF27|SM00436|SM00437|SM00493|SSF56712|SSF57783|TIGR01051 NIDE_RS04705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002024|IPR008331|IPR009078|IPR012347 Bacterioferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PIRSF002560|PR00601|PTHR30295|PTHR30295:SF9|SSF47240|TIGR00754 NIDE_RS04710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002024|IPR008331|IPR009078|IPR012347 Bacterioferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PIRSF002560|PR00601|PTHR30295|PTHR30295:SF9|SSF47240|TIGR00754 NIDE_RS04715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|PTHR11019|SM00342|SSF46689 NIDE_RS04740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023614 Porin domain G3DSA:2.40.160.10|SSF56935 NIDE_RS04745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003374|IPR024932 ApbE-like domain|Flavin transferase ApbE GO:0017013 PF02424|PIRSF006268|PTHR30040|PTHR30040:SF2|SSF143631 NIDE_RS04755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|PTHR33446|PTHR33446:SF2|SSF74653|TIGR01352 NIDE_RS04760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF3 NIDE_RS04765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002898|IPR014172 MotA/TolQ/ExbB proton channel|TonB-system energizer ExbB type-2 GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625|PTHR30625:SF6|TIGR02805 NIDE_RS04770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PTHR24220|PTHR24220:SF282|SM00382|SSF50331|SSF52540 NIDE_RS04775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30183|PTHR30183:SF2|SSF161098 NIDE_RS04780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR026045 Ferric binding protein G3DSA:3.40.190.10|PF13343|PIRSF002825|PTHR30006|PTHR30006:SF4|SSF53850 NIDE_RS04785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|PTHR33202|SSF46785 NIDE_RS04795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011006 CheY-like superfamily G3DSA:3.40.50.2300|SSF52172 NIDE_RS04800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS04805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 PF02074|PIRSF006615|PR00998|PTHR34217|PTHR34217:SF1|SSF55486 NIDE_RS04810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002935|IPR029063 O-methyltransferase, family 3|S-adenosyl-L-methionine-dependent methyltransferase GO:0008171 G3DSA:3.40.50.150|PF01596|PTHR10509|PTHR10509:SF14|SSF53335 NIDE_RS04815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|SSF103481 NIDE_RS04820 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000683|IPR004104|IPR016040 NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PTHR22604|SSF51735|SSF55347 NIDE_RS04835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS04845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PTHR26402|PTHR26402:SF590|SM00421|SSF46894 NIDE_RS04850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF13474|PTHR34957|SSF54427 NIDE_RS04885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006222|IPR013977|IPR017703|IPR027266|IPR028896|IPR029043 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain|YgfZ/GcvT conserved site GO:0005515 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|PF01571|PF08669|PIRSF006487|PTHR22602|PTHR22602:SF0|SSF101790|SSF103025|TIGR03317 NIDE_RS04890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011006 CheY-like superfamily G3DSA:3.40.50.2300|SSF52172 NIDE_RS04895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001440|IPR011716|IPR011990|IPR019734 Tetratricopeptide TPR-3|Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF07720|PF13424|PTHR23083|SM00028|SSF48452 NIDE_RS04900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002922|IPR022828|IPR023753 FAD/NAD(P)-binding domain|Thiazole biosynthetic enzyme Thi4 family|Thiazole biosynthetic enzyme, putative GO:0016491|GO:0055114 G3DSA:3.50.50.60|MF_00304|PF01946|PR00411|PTHR10617|PTHR10617:SF115|SSF51905|TIGR00292 NIDE_RS04905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002817|IPR025747 Phosphomethylpyrimidine synthase|ThiC-associated domain GO:0009228|GO:0051536 MF_00089|PF01964|PF13667|PTHR30557|PTHR30557:SF1|TIGR00190 NIDE_RS04910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435 NIDE_RS04920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024079 Metallopeptidase, catalytic domain GO:0008237 G3DSA:3.40.390.10|SSF55486 NIDE_RS04925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR23091|PTHR23091:SF256|SSF55729 NIDE_RS04930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 NIDE_RS04935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002711|IPR003615 HNH endonuclease|HNH nuclease GO:0003676|GO:0004519 PF01844|SM00507 NIDE_RS04945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010696|IPR013083 Protein of unknown function DUF1272|Zinc finger, RING/FYVE/PHD-type G3DSA:3.30.40.10|PF06906 NIDE_RS04950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 NIDE_RS04955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021352 Protein of unknown function DUF2971 PF11185 NIDE_RS04960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003473|IPR023515 Quinolinate synthase A, type 3|Quinolinate synthetase A GO:0008987|GO:0009435|GO:0016765|GO:0051539 MF_00569|PF02445|PTHR30573|PTHR30573:SF0|SSF142754|TIGR00550 NIDE_RS04965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001412|IPR002300|IPR002301|IPR009008|IPR009080|IPR010663|IPR013155|IPR014729|IPR023585 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 1|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|Zinc finger, FPG/IleRS-type GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02002|PF00133|PF06827|PF08264|PR00984|PS00178|PTHR11946|PTHR11946:SF11|SSF47323|SSF50677|SSF52374|TIGR00392 NIDE_RS04970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|PS00855|PTHR33695|PTHR33695:SF1|TIGR00077 NIDE_RS04975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018592|IPR023122 NE1680-like domain|Protein of unknown function DUF2024 G3DSA:3.10.510.10|PF09630|SSF160766 NIDE_RS04980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673|PTHR30622|PTHR30622:SF3 NIDE_RS04990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30572|PTHR30572:SF1|SSF111369|TIGR01730 NIDE_RS04995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF578|SM00382|SSF52540 NIDE_RS05000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30572|PTHR30572:SF7 NIDE_RS05005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003607|IPR006674|IPR006675|IPR021812 HD domain|HD/PDEase domain|HDIG domain|Protein of unknown function DUF3391 G3DSA:1.10.3210.10|PF11871|PF13487|SM00471|SSF109604|TIGR00277 NIDE_RS05010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 G3DSA:3.30.1330.70|PF05866|SSF103084 NIDE_RS05015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003444|IPR020603 MraZ domain|Transcriptional regulator MraZ GO:0003700|GO:0006355 G3DSA:2.10.260.10|MF_01008|PD006745|PF02381|PTHR34701|SSF89447 NIDE_RS05020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PF09723|PTHR34404|PTHR34404:SF3|SM00834|TIGR02605 NIDE_RS05025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR11907|PTHR11907:SF9|SSF53271 NIDE_RS05030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 NIDE_RS05035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005720|IPR012135|IPR013785|IPR024920 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1|Dihydroorotate dehydrogenase, class 1/ 2 GO:0003824|GO:0004152|GO:0005737|GO:0006221|GO:0006222|GO:0016627|GO:0055114 G3DSA:3.20.20.70|MF_00224|PF01180|PIRSF000164|PTHR11938|PTHR11938:SF106|SSF51395|TIGR01037 NIDE_RS05045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30489|PTHR30489:SF6 NIDE_RS05050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0004076|GO:0009102|GO:0051536 G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|PTHR22976|PTHR22976:SF1|SM00729|SM00876|SSF102114|TIGR00433 NIDE_RS05055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF12895|PF13432|PF14559|PTHR23083|SM00028|SSF48452 NIDE_RS05060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004394 Protein Iojap/ribosomal silencing factor RsfS G3DSA:3.30.460.10|MF_01477|PF02410|PTHR21043|SSF81301|TIGR00090 NIDE_RS05065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Probable nicotinate-nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|PTHR12039|SSF52374|TIGR00125|TIGR00482 NIDE_RS05070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001048|IPR001057|IPR002478|IPR005715|IPR011529|IPR015947|IPR019797 Aspartate/glutamate/uridylate kinase|Glutamate 5-kinase|Glutamate 5-kinase, conserved site|Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase|Glutamate/acetylglutamate kinase|PUA domain|PUA-like domain GO:0003723|GO:0004349|GO:0005737|GO:0006561 G3DSA:2.30.130.10|G3DSA:3.40.1160.10|MF_00456|PF00696|PF01472|PIRSF000729|PR00474|PS00902|PTHR11063|PTHR11063:SF12|SM00359|SSF53633|SSF88697|TIGR01027 NIDE_RS05075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005225|IPR006073|IPR006074|IPR006169|IPR014100|IPR027417 GTP binding domain|GTP-binding protein Obg/CgtA|GTP1/OBG domain|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0000287|GO:0003924|GO:0005525 G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PIRSF002401|PR00326|PS00905|PTHR11702|PTHR11702:SF3|SSF52540|SSF82051|TIGR00231|TIGR02729 NIDE_RS05080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001684|IPR018261 Ribosomal protein L27|Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|PS00831|PTHR15893|SSF110324|TIGR00062 NIDE_RS05085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001787|IPR018258|IPR028909 Ribosomal protein L21|Ribosomal protein L21, conserved site|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|PS01169|PTHR21349|SSF141091|TIGR00061 NIDE_RS05090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001544|IPR005785|IPR018300 Aminotransferase class IV|Aminotransferase, class IV, conserved site|Branched-chain amino acid aminotransferase I GO:0003824|GO:0004084|GO:0008152|GO:0009081 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|PTHR11825|PTHR11825:SF7|SSF56752|TIGR01122 NIDE_RS05095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840|PR01651|PTHR34182|TIGR00810 NIDE_RS05100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000652|IPR013785|IPR020861|IPR022896 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096|GO:0008152 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|PTHR21139|SSF51351|TIGR00419 NIDE_RS05105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001576|IPR015824|IPR015901|IPR015911 Phosphoglycerate kinase|Phosphoglycerate kinase, C-terminal|Phosphoglycerate kinase, N-terminal|Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 G3DSA:3.40.50.1260|G3DSA:3.40.50.1270|MF_00145|PF00162|PIRSF000724|PR00477|PS00111|PTHR11406|SSF53748 NIDE_RS05110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006424|IPR016040|IPR020828|IPR020829|IPR020830|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|PTHR10836|PTHR10836:SF50|SM00846|SSF51735|SSF55347|TIGR01534 NIDE_RS05115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000432|IPR002625|IPR005747|IPR007696|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, core|Endonuclease MutS2|P-loop containing nucleoside triphosphate hydrolase|Smr domain GO:0004519|GO:0005524|GO:0006298|GO:0016887|GO:0030983|GO:0045910 G3DSA:3.40.50.300|MF_00092|PF00488|PF01713|PIRSF005814|PTHR11361|PTHR11361:SF14|SM00463|SM00533|SM00534|SSF160443|SSF48334|SSF52540 NIDE_RS05120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR003594|IPR003660|IPR003661|IPR004358|IPR013656 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF08448|PR00344|PTHR24423|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS05125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS05145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021796 Protein of unknown function DUF3365 PF11845 NIDE_RS05155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001054|IPR007890|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|CHASE2|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|PF05226|PTHR11920|PTHR11920:SF341|SM00044|SM01080|SSF55073 NIDE_RS05160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003646 SH3-like domain, bacterial-type PF08239|SM00287 NIDE_RS05165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR22726|PTHR22726:SF9 NIDE_RS05170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR003661|IPR004358|IPR029151|IPR033479 Double Cache domain 1|Histidine kinase-like ATPase, C-terminal domain|Periplasmic sensor domain-like|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF02743|PR00344|PTHR24423|PTHR24423:SF445|SM00387|SM00388|SSF103190|SSF47384|SSF55874 NIDE_RS05175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS05180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004453|IPR009051|IPR013542|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Domain of unknown function DUF1730|Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491|GO:0051536 G3DSA:3.30.70.20|MF_00916|PF08331|PF13484|PS00198|PTHR30002|PTHR30002:SF4|SSF46548|TIGR00276 NIDE_RS05190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001789|IPR011006|IPR013767 CheY-like superfamily|PAS domain|PAS fold|Signal transduction response regulator, receiver domain GO:0000160|GO:0006355 G3DSA:3.30.450.20|G3DSA:3.40.50.2300|PF00072|PF00989|PTHR26402|SM00091|SM00448|SSF52172|SSF55785|TIGR00229 NIDE_RS05195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005031|IPR023393 Coenzyme Q-binding protein COQ10, START domain|START-like domain G3DSA:3.30.530.20|PF03364|SSF55961 NIDE_RS05200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003720|IPR004114|IPR014729|IPR020536 Rossmann-like alpha/beta/alpha sandwich fold|THUMP domain|Thil, AANH domain|tRNA sulfurtransferase ThiI GO:0003723|GO:0004810|GO:0005737|GO:0016783|GO:0034227 G3DSA:3.40.50.620|MF_00021|PF02568|PF02926|PTHR14911|PTHR14911:SF16|SM00981|SSF143437|SSF52402|TIGR00342 NIDE_RS05205 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000103|IPR005982|IPR008255|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|PTHR22912|PTHR22912:SF48|SSF51905|TIGR01292 NIDE_RS05210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001977|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004140|GO:0005524|GO:0015937 G3DSA:3.40.50.300|MF_00376|PF01121|PTHR10695|SSF52540|TIGR00152 NIDE_RS05215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000070|IPR011050|IPR012334 Pectin lyase fold|Pectin lyase fold/virulence factor|Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 G3DSA:2.160.20.10|PF01095|PF13229|SSF51126 NIDE_RS05225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004888|IPR008928|IPR031335 Glycoside hydrolase family 63|Glycosyl hydrolase family 63, C-terminal|Six-hairpin glycosidase-like GO:0003824|GO:0004573|GO:0009311 PF03200|PTHR10412|PTHR10412:SF10|SSF48208 NIDE_RS05230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006451|IPR008928|IPR010401|IPR012341|IPR024742|IPR032790 Glycogen debranching enzyme|Glycogen debranching enzyme, C-terminal|Glycogen debranching enzyme, archaeal type|Glycogen debranching enzyme, bacterial and archaeal type, N-terminal|Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824|GO:0004134|GO:0004135|GO:0005980 G3DSA:1.50.10.10|PF06202|PF12439|PTHR10569|SSF48208|TIGR01561 NIDE_RS05245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008775 Phytanoyl-CoA dioxygenase G3DSA:2.60.120.620|PF05721|SSF51197 NIDE_RS05250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005624 Haem-degrading PF03928|PTHR34309|PTHR34309:SF1|SSF143744 NIDE_RS05260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PTHR22981|SSF48179|SSF51735 NIDE_RS05265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021948 Protein of unknown function DUF3565 PF12088 NIDE_RS05275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001354|IPR013341|IPR013342|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain|Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PTHR13794|PTHR13794:SF55|SM00922|SSF51604|SSF54826 NIDE_RS05280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000572|IPR008335 Eukaryotic molybdopterin oxidoreductase|Oxidoreductase, molybdopterin-binding domain GO:0016491|GO:0042128|GO:0055114 G3DSA:3.90.420.10|PF00174|PR00407|PTHR19372|SSF56524 NIDE_RS05285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR015414|IPR032816 SNARE associated Golgi protein|Transmembrane protein TMEM64/TMEM41 GO:0016021 PF09335|PTHR12677 NIDE_RS05290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004099|IPR012999|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF29|SSF51905|SSF55424 NIDE_RS05295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021409 Protein of unknown function DUF3047 PF11249 NIDE_RS05310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644|IPR001667|IPR002646|IPR003156|IPR032828 CBS domain|DDH domain|DHHA1 domain|Poly A polymerase, head domain|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0003676|GO:0003723|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.10.580.10|G3DSA:3.30.460.10|G3DSA:3.90.1640.10|PF00571|PF01368|PF01743|PF02272|PF12627|PTHR13734|PTHR13734:SF8|SM00116|SSF54631|SSF64182|SSF81301|SSF81891 NIDE_RS05320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003778|IPR029000 Carboxyltransferase domain, subdomain A and B|Cyclophilin-like domain G3DSA:2.40.100.10|PF02626|PTHR18866|PTHR18866:SF74|SM00797|SSF50891|TIGR00724 NIDE_RS05325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005501|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|Uncharacterised protein family UPF0271, LamB/YcsF GO:0003824|GO:0005975 PF03746|PTHR30292|PTHR30292:SF0|SSF88713 NIDE_RS05330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003833|IPR010016|IPR024946|IPR029000 Arginine repressor C-terminal-like domain|Carboxyltransferase domain, subdomain C and D|Cyclophilin-like domain|KipI family G3DSA:2.40.100.10|G3DSA:3.30.1360.40|PF02682|PTHR34698|PTHR34698:SF2|SM00796|SSF160467|SSF50891|TIGR00370 NIDE_RS05335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23508|PTHR23508:SF18|SSF103473 NIDE_RS05345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PTHR11271|PTHR11271:SF33|SSF51338|SSF51556 NIDE_RS05350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021796 Protein of unknown function DUF3365 PF11845 NIDE_RS05355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR024169 Aminotransferase class V domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|PTHR21152|SSF53383 NIDE_RS05360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003675 CAAX amino terminal protease GO:0016020 PF02517|PTHR10794|PTHR10794:SF37 NIDE_RS05370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR011712 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF02518|PF07730|PTHR24421|SM00387|SSF55874 NIDE_RS05375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF458|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS05380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF583|SM00448|SSF52172 NIDE_RS05390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001650|IPR011545|IPR013701|IPR014001|IPR027417 DEAD/DEAH box helicase domain|DEAD/H associated|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524|GO:0016818 G3DSA:3.40.50.300|PF00270|PF00271|PF08494|PTHR24031|PTHR24031:SF336|SM00487|SM00490|SSF52540 NIDE_RS05400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021383 Protein of unknown function DUF3015 PF11220 NIDE_RS05415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016838|IPR019283 Protein of unknown function DUF2330|Uncharacterised conserved protein UCP026449 PF10092|PIRSF026449 NIDE_RS05430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|SSF143120|TIGR01552 NIDE_RS05435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016 NIDE_RS05440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014966 FRG domain PF08867|SM00901 NIDE_RS05445 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010297|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF900, hydrolase-like G3DSA:3.40.50.1820|PF05990 NIDE_RS05460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011991|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PTHR30173|SSF88659|SSF88946|TIGR02937 NIDE_RS05465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 NIDE_RS05470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000873|IPR002123|IPR011701|IPR020845|IPR020846 AMP-binding, conserved site|AMP-dependent synthetase/ligase|Major facilitator superfamily|Major facilitator superfamily domain|Phospholipid/glycerol acyltransferase GO:0003824|GO:0008152|GO:0016021|GO:0016746|GO:0055085 G3DSA:1.20.1250.20|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.1130.10|G3DSA:3.40.50.980|PF00501|PF01553|PF07690|PS00455|PTHR24096|PTHR24096:SF211|SM00563|SSF103473|SSF56801|SSF69593 NIDE_RS05475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000432|IPR007696|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.40.50.300|PF00488|PF05192|PTHR11361|SM00534|SSF48334|SSF52540 NIDE_RS05480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF06325|PTHR18895|PTHR18895:SF3|SSF53335 NIDE_RS05485 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005302|IPR011037|IPR015808 Molybdenum cofactor sulfurase, C-terminal|Molybdenum cofactor sulfurase, C-terminal-like|Pyruvate kinase-like, insert domain GO:0003824|GO:0030151|GO:0030170 G3DSA:2.40.33.20|PF03473|PTHR30212|SSF50800 NIDE_RS05490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|PTHR10108:SF785|SSF53335 NIDE_RS05495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS05510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PTHR10992|SSF53474 NIDE_RS05520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004399|IPR013749|IPR029056 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like GO:0008972|GO:0009228 G3DSA:3.40.1190.20|PF08543|PTHR20858|PTHR20858:SF17|SSF53613|TIGR00097 NIDE_RS05535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF13646|PTHR12697|PTHR12697:SF18|SM00567|SSF48371 NIDE_RS05540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004305|IPR016084|IPR027574 Haem oxygenase-like, multi-helical|Thiaminase II|Thiaminase-2/PQQC GO:0006772|GO:0050334 G3DSA:1.20.910.10|PF03070|PTHR20858|SSF48613|TIGR04306 NIDE_RS05545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004099|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PTHR22912|PTHR22912:SF93|SSF51905|SSF55424 NIDE_RS05550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|PTHR10681|PTHR10681:SF81|SSF52833 NIDE_RS05555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|PTHR10992|SSF53474 NIDE_RS05560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000089|IPR000891|IPR001882|IPR003379|IPR005776|IPR011053|IPR013785 Aldolase-type TIM barrel|Biotin-binding site|Biotin/lipoyl attachment|Carboxylase, conserved domain|Oxaloacetate decarboxylase, alpha subunit|Pyruvate carboxyltransferase|Single hybrid motif GO:0003824|GO:0006814|GO:0008948 G3DSA:2.40.50.100|G3DSA:3.20.20.70|PF00364|PF00682|PF02436|PS00188|PTHR18866|PTHR18866:SF109|SSF51230|SSF51569|SSF89000|TIGR01108 NIDE_RS05565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004549|IPR005479|IPR005481|IPR005482|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Acetyl-CoA carboxylase, biotin carboxylase|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0005524|GO:0016874 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00866|PS00867|PTHR18866|SM00878|SSF51246|SSF52440|SSF56059|TIGR00514 NIDE_RS05570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002909|IPR013783|IPR014756 IPT domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0005515 G3DSA:2.60.40.10|PF01833|SSF81296 NIDE_RS05575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|PTHR30570|PTHR30570:SF1|SSF53850 NIDE_RS05580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PF09723|SM00834|TIGR02605 NIDE_RS05590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|SSF103481 NIDE_RS05600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005804|IPR015876 Fatty acid desaturase domain|Fatty acid desaturase, type 1, core GO:0006629|GO:0016717|GO:0055114 PF00487|PR00075|PTHR11351|PTHR11351:SF34 NIDE_RS05605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000257|IPR006361 Uroporphyrinogen decarboxylase (URO-D)|Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 G3DSA:3.20.20.210|MF_00218|PF01208|PS00906|PS00907|PTHR21091|PTHR21091:SF2|SSF51726|TIGR01464 NIDE_RS05610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001015 Ferrochelatase GO:0004325|GO:0006783 G3DSA:3.40.50.1400|MF_00323|PF00762|PTHR11108|SSF53800|TIGR00109 NIDE_RS05615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002937|IPR004572|IPR023753|IPR027418 Amine oxidase|FAD/NAD(P)-binding domain|Protoporphyrinogen oxidase|Protoporphyrinogen oxidase, C-terminal domain GO:0004729|GO:0006779|GO:0016491|GO:0055114 G3DSA:1.10.3110.10|G3DSA:3.90.660.20|PF01593|PTHR10742|PTHR10742:SF294|SSF51905|SSF54373|TIGR00562 NIDE_RS05630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004518|IPR011551 NTP pyrophosphohydrolase MazG|NTP pyrophosphohydrolase MazG, putative catalytic core G3DSA:1.10.287.1080|PF03819|PTHR30522|PTHR30522:SF0|SSF101386|TIGR00444 NIDE_RS05635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014995 Protein of unknown function DUF1844 PF08899 NIDE_RS05640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR003594|IPR003660|IPR003661|IPR004358|IPR013767|IPR017232 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, nitrogen fixation and metabolism regulator|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0006355|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00672|PF00989|PF02518|PIRSF037532|PR00344|PTHR24423|PTHR24423:SF471|SM00091|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS05645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PS00676|PS00688|PTHR32071|PTHR32071:SF17|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS05650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004733|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine cyclo-ligase|PurM-like, N-terminal domain GO:0004641|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00741|PF00586|PF02769|PTHR10520|SSF55326|SSF56042|TIGR00878 NIDE_RS05655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001555|IPR002376|IPR004607 Formyl transferase, N-terminal|Phosphoribosylglycinamide formyltransferase|Phosphoribosylglycinamide formyltransferase, active site GO:0004644|GO:0006189|GO:0009058|GO:0016742 G3DSA:3.40.50.170|MF_01930|PF00551|PS00373|PTHR10520|SSF53328|TIGR00639 NIDE_RS05665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 G3DSA:1.20.120.160|PF01627|SSF47226 NIDE_RS05670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF382|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 NIDE_RS05675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000160|IPR001789|IPR011006|IPR029787 CheY-like superfamily|GGDEF domain|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00990|PTHR26402|SM00267|SM00448|SSF52172|SSF55073|TIGR00254 NIDE_RS05680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS05685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003789|IPR019004|IPR023168 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Uncharacterised domain YOR215C, mitochondrial GO:0016884 G3DSA:1.10.10.410|G3DSA:1.10.1510.10|PF09424|PTHR28055|PTHR28055:SF1|SSF89095 NIDE_RS05695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23526|PTHR23526:SF2|SSF103473 NIDE_RS05710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000889|IPR012336|IPR029759 Glutathione peroxidase|Glutathione peroxidase active site|Thioredoxin-like fold GO:0004602|GO:0006979|GO:0055114 G3DSA:3.40.30.10|PF00255|PR01011|PS00460|PTHR11592|SSF52833 NIDE_RS05715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR10120|PTHR10120:SF19 NIDE_RS05720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008972|IPR028096 Cupredoxin|EfeO-type cupredoxin-like domain G3DSA:2.60.40.420|PF13473|SSF49503 NIDE_RS05725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002060|IPR008949 Isoprenoid synthase domain|Squalene/phytoene synthase GO:0009058|GO:0016740 G3DSA:1.10.600.10|PF00494|PTHR11626|PTHR11626:SF4|SSF48576 NIDE_RS05735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12837|SSF54862 NIDE_RS05745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PTHR11780|PTHR11780:SF12|SSF52833 NIDE_RS05755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007698|IPR007886|IPR008141|IPR016040|IPR023753 Alanine dehydrogenase|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|FAD/NAD(P)-binding domain|NAD(P)-binding domain GO:0000286|GO:0016491|GO:0042853|GO:0055114 G3DSA:3.40.50.1770|G3DSA:3.50.50.60|PF01262|PF05222|PIRSF000183|PTHR10160|SM01002|SM01003|SSF51735|SSF52283|TIGR00518 NIDE_RS05765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001792 Acylphosphatase-like domain G3DSA:3.30.70.100|PF00708|PTHR10029|SSF54975 NIDE_RS05770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR009042|IPR011991|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF00140|PF04539|PF04542|PF04545|PR00046|PS00715|PS00716|PTHR30603|PTHR30603:SF15|SSF88659|SSF88946|TIGR02937 NIDE_RS05775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000836|IPR005764|IPR029057 Adenine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0003999|GO:0005737|GO:0006168|GO:0009116 G3DSA:3.40.50.2020|MF_00004|PF00156|PTHR32315|SSF53271|TIGR01090 NIDE_RS05780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PF01258|PTHR33823|PTHR33823:SF3|SSF109635|SSF57716 NIDE_RS05785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014729|IPR018317 Queuosine biosynthesis protein QueC|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|MF_01633|PF06508|PIRSF006293|PTHR11587|PTHR11587:SF3|SSF52402|TIGR00364 NIDE_RS05790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS05795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001107 Band 7 domain PF01145|SSF117892 NIDE_RS05805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003385|IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 77 GO:0004134|GO:0005975 G3DSA:3.20.20.80|PF02446|PTHR32438|PTHR32438:SF5|SSF51445|TIGR00217 NIDE_RS05810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|SM00387|SM00388|SSF47384|SSF55874 NIDE_RS05815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS05825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011008|IPR019887 Dimeric alpha-beta barrel|Transcription regulator AsnC/Lrp, ligand binding domain G3DSA:3.30.70.920|PF01037|SSF54909 NIDE_RS05840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR24423|PTHR24423:SF458|SM00448|SSF52172 NIDE_RS05860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003812|IPR011991|IPR025230 Domain of unknown function DUF4172|Fido domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:1.10.3290.10|PF02661|PF13776|PTHR13504|PTHR13504:SF33|SSF140931 NIDE_RS05880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 PF02486 NIDE_RS05885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009061|IPR010093|IPR011991 Putative DNA-binding domain|SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|SSF46955|TIGR01764 NIDE_RS05890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF02899|PTHR30349|PTHR30349:SF20|SSF56349 NIDE_RS05905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025641 Domain of unknown function DUF4340 PF14238 NIDE_RS05910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019196|IPR029062 ABC-type uncharacterised transport system|Class I glutamine amidotransferase-like G3DSA:3.40.50.880|PF09822|PTHR12969|PTHR12969:SF8|SSF52317 NIDE_RS05915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032688 ABC-2 family transporter protein GO:0006810 PF12679|PTHR30294|PTHR30294:SF5 NIDE_RS05920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF160|SM00382|SSF52540 NIDE_RS05945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF03130|PF13646|PTHR12697|PTHR12697:SF5|SM00567|SSF48371 NIDE_RS05955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF13646|PTHR12697|PTHR12697:SF18|SM00567|SSF48371 NIDE_RS05960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000811|IPR011834|IPR024517 Alpha-glucan phosphorylase|Glycogen phosphorylase, domain of unknown function DUF3417|Glycosyl transferase, family 35 GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PF11897|PIRSF000460|PTHR11468|PTHR11468:SF9|SSF53756|TIGR02094 NIDE_RS05970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000212|IPR014016|IPR014017|IPR027417 DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|PTHR11070|PTHR11070:SF3|SSF52540 NIDE_RS05995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PTHR23115|PTHR23115:SF112|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 NIDE_RS06000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001705|IPR011332|IPR018264 Ribosomal protein L33|Ribosomal protein L33, conserved site|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00294|PF00471|PS00582|PTHR15238|PTHR15238:SF3|SSF57829|TIGR01023 NIDE_RS06010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001901|IPR005807|IPR022943 Preprotein translocase subunit SecE|Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|PTHR33910|PTHR33910:SF1|TIGR00964 NIDE_RS06015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001062|IPR005824|IPR006645|IPR008991|IPR014722|IPR015869 KOW|NusG, N-terminal|Ribosomal protein L2 domain 2|Transcription antitermination protein, NusG|Transcription antitermination protein, NusG, bacteria, conserved site|Translation protein SH3-like domain GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF00467|PF02357|PR00338|PS01014|PTHR30265|SM00738|SM00739|SSF50104|SSF82679|TIGR00922 NIDE_RS06020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000911|IPR006519|IPR020783|IPR020784 Ribosomal protein L11, C-terminal|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|PTHR11661|SM00649|SSF46906|SSF54747|TIGR01632 NIDE_RS06025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002143|IPR005878|IPR016094|IPR016095|IPR023673|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, 2-layer alpha/beta-sandwich|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|PTHR23105|PTHR23105:SF5|SSF56808|TIGR01169 NIDE_RS06030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000206|IPR008932|IPR013823|IPR014719 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|PTHR24089|PTHR24089:SF272|SSF48300|SSF54736|TIGR00855 NIDE_RS06035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR015712|IPR019462 DNA-directed RNA polymerase, beta subunit|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2|DNA-directed RNA polymerase, subunit 2, domain 6|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351|GO:0032549 G3DSA:2.30.150.10|G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|PTHR20856|PTHR20856:SF20|SSF64484|TIGR02013 NIDE_RS06040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.40.20|G3DSA:2.40.50.100|MF_01322|PF00623|PF04983|PF04997|PF04998|PF05000|PTHR19376|PTHR19376:SF32|SM00663|SSF64484|TIGR02386 NIDE_RS06045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacteria|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|PTHR11652|SSF50249|TIGR00981 NIDE_RS06050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000235|IPR005717|IPR020606|IPR023798 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7, bacterial/organellar-type|Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PS00052|PTHR11205|SSF47973|TIGR01029 NIDE_RS06055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417|IPR031157 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|PTHR23115|PTHR23115:SF66|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 NIDE_RS06060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PTHR23115|PTHR23115:SF112|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 NIDE_RS06065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001848|IPR018268|IPR027486 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|PTHR11700|SM01403|SSF54999|TIGR01049 NIDE_RS06070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000597|IPR009000|IPR019926|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation protein, beta-barrel domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.30.10|G3DSA:4.10.960.10|MF_01325_B|PF00297|PS00474|PTHR11229|SSF50447|TIGR03625 NIDE_RS06080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001014|IPR012677|IPR012678|IPR013025 Nucleotide-binding alpha-beta plait domain|Ribosomal protein L23/L15e core domain|Ribosomal protein L23/L25, conserved site|Ribosomal protein L25/L23 GO:0000166|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|PS00050|PTHR11620|SSF54189 NIDE_RS06085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2 domain 2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 3|Translation protein SH3-like domain GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|PTHR13691|PTHR13691:SF5|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 NIDE_RS06090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|PTHR11880|SSF54570|TIGR01050 NIDE_RS06095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001063|IPR005727|IPR018260 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17|Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|MF_01331_B|PF00237|PS00464|PTHR13501|SSF54843|TIGR01044 NIDE_RS06100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280 K Homology domain|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|PTHR11760|PTHR11760:SF19|SM00322|SSF54814|SSF54821|TIGR01009 NIDE_RS06105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000114|IPR016180|IPR020798 Ribosomal protein L10e/L16|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00701|PTHR12220|SSF54686|TIGR01164 NIDE_RS06110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001854|IPR018254 Ribosomal protein L29|Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|PS00579|PTHR10916|SSF46561|TIGR00012 NIDE_RS06115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000266|IPR012340|IPR019979|IPR019984 Nucleic acid-binding, OB-fold|Ribosomal protein S17, bacterial-type|Ribosomal protein S17, conserved site|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PS00056|PTHR10744|PTHR10744:SF1|SSF50249|TIGR03635 NIDE_RS06120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000218|IPR005745|IPR019972 Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|PTHR11761|SM01374|SSF50193|TIGR01067 NIDE_RS06125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003256|IPR005824|IPR005825|IPR008991|IPR014722 KOW|Ribosomal protein L2 domain 2|Ribosomal protein L24|Ribosomal protein L24/L26, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF00467|PF17136|PS01108|PTHR12903|SM00739|SSF50104|TIGR01079 NIDE_RS06130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002132|IPR020929|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type|Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PS00358|PTHR11994|SSF55282 NIDE_RS06135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PTHR11758|PTHR11758:SF4|SSF56047 NIDE_RS06140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000702|IPR019906|IPR020040 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|MF_01365_B|PF00347|PIRSF002162|PR00059|PTHR11655|PTHR11655:SF14|SSF56053|TIGR03654 NIDE_RS06145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|PTHR12899|SSF53137|TIGR00060 NIDE_RS06150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000851|IPR005324|IPR005712|IPR013810|IPR014720|IPR014721|IPR018192|IPR020568 Double-stranded RNA-binding domain|Ribosomal protein S5|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|PTHR13718|SSF54211|SSF54768|TIGR01021 NIDE_RS06155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005996|IPR016082 Ribosomal protein L30, bacterial-type|Ribosomal protein L30, ferredoxin-like fold domain GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.1390.20|MF_01371_B|PF00327|PIRSF002211|PTHR15892|PTHR15892:SF2|SSF55129|TIGR01308 NIDE_RS06160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001196|IPR005749|IPR021131|IPR030878 Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L15, conserved site|Ribosomal protein L18e/L15P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|PS00475|PTHR12934|SSF52080|TIGR01071 NIDE_RS06165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY subunit domain|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00755|PS00756|PTHR10906|PTHR10906:SF2|SSF103491|TIGR00967 NIDE_RS06170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000850|IPR006259|IPR007862|IPR027417 Adenylate kinase subfamily|Adenylate kinase, active site lid domain|Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004017|GO:0005524|GO:0006139|GO:0016776|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PF05191|PR00094|PS00113|PTHR23359|SSF52540|TIGR01351 NIDE_RS06175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000994|IPR001714|IPR002467 Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|PS00680|PTHR10804|PTHR10804:SF41|SSF55920|TIGR00500 NIDE_RS06180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004368|IPR006196|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|PTHR33370|SM00316|SSF50249|TIGR00008 NIDE_RS06185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001892|IPR010979|IPR018269|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13, conserved site|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PS00646|PTHR10871|SSF46946|TIGR03631 NIDE_RS06190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001971|IPR018102|IPR019981 Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|PTHR11759|SSF53137|TIGR03632 NIDE_RS06195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001912|IPR002942|IPR005709|IPR018079|IPR022801 RNA-binding S4 domain|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|PTHR11831|PTHR11831:SF4|SM00363|SM01390|SSF55174|TIGR01017 NIDE_RS06200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009025|IPR011260|IPR011262|IPR011263|IPR011773 DNA-directed RNA polymerase, RBP11-like dimerisation domain|DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:2.170.120.12|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|PTHR32108|PTHR32108:SF0|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 NIDE_RS06205 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|MF_01368|PF01196|PS01167|PTHR14413|SSF64263|TIGR00059 NIDE_RS06210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010664|IPR026265 Lipopolysaccharide assembly, LptC-related|Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PF06835|TIGR04409 NIDE_RS06220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR027417|IPR030921 AAA+ ATPase domain|ABC transporter-like|LPS export ABC transporter, ATP-binding protein LptB|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0043190|GO:0055085 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF497|SM00382|SSF52540|TIGR04406 NIDE_RS06225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000394|IPR007046|IPR007634 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.8.320|PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00717|PS00718|PTHR32248|PTHR32248:SF4|TIGR02395 NIDE_RS06230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 G3DSA:3.30.160.100|G3DSA:3.30.540.10|PF02482|PTHR33231|SSF69754|TIGR00741 NIDE_RS06235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005337|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RapZ-like family GO:0005524 G3DSA:3.40.50.300|MF_00636|PF03668|PIRSF005052|PTHR30448|PTHR30448:SF0|SSF52540 NIDE_RS06240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|SSF46955 NIDE_RS06245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003494|IPR005883 SHS2 domain inserted in FtsA|Type IV pilus assembly protein PilM GO:0005515|GO:0007049 G3DSA:3.30.420.40|PF11104|PIRSF019169|PTHR32432|PTHR32432:SF3|SM00842|SSF53067|TIGR01175 NIDE_RS06250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007813 Fimbrial assembly PilN PF05137 NIDE_RS06255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007445|IPR014717 Pilus assembly protein, PilO|Translation elongation factor EF1B/ribosomal protein S6 G3DSA:3.30.70.60|PF04350|PTHR39555|PTHR39555:SF1 NIDE_RS06260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007446 Pilus assembly protein PilP PF04351 NIDE_RS06270 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016037|IPR030960|IPR030963 3-dehydroquinate synthase AroB|3-dehydroquinate synthase domain|3-dehydroquinate synthase family GO:0003856|GO:0005737|GO:0009073|GO:0016838 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|MF_00110|PF01761|PIRSF001455|PTHR21090|SSF56796|TIGR01357 NIDE_RS06275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003018|IPR005561|IPR011991|IPR027035|IPR029016 ANTAR domain|GAF domain|GAF domain-like|Hypoxia/Redox sensor histidine kinase response regulator DosT/DevS|Winged helix-turn-helix DNA-binding domain GO:0003723|GO:0004673|GO:0005515|GO:0046777|GO:0070483 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF03861|PF13185|PTHR11347|PTHR11347:SF114|SM00065|SM01012|SSF55781 NIDE_RS06290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003010|IPR003694|IPR014445|IPR014729|IPR022310 Carbon-nitrogen hydrolase|Glutamine-dependent NAD(+) synthetase|NAD(+) synthetase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0006807|GO:0009435|GO:0016810 G3DSA:3.40.50.620|G3DSA:3.60.110.10|PF00795|PF02540|PIRSF006630|PTHR23090|SSF52402|SSF56317|TIGR00552 NIDE_RS06300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001905|IPR018047|IPR024041|IPR029020 Ammonium transporter|Ammonium transporter AmtB-like domain|Ammonium transporter, conserved site|Ammonium/urea transporter GO:0008519|GO:0015696|GO:0016020|GO:0072488 G3DSA:1.10.3430.10|PF00909|PS01219|PTHR11730|PTHR11730:SF17|SSF111352|TIGR00836 NIDE_RS06305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002187|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00638|PTHR30115|SM00938|SSF54913 NIDE_RS06310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003607|IPR006674|IPR010043|IPR013546 Bifunctional uridylyltransferase/uridylyl-removing enzyme|HD domain|HD/PDEase domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0006807|GO:0008773|GO:0016779 G3DSA:1.10.3210.10|G3DSA:3.30.460.10|G3DSA:3.30.70.260|MF_00277|PF01966|PF08335|PIRSF006288|PTHR13734|PTHR13734:SF45|SM00471|SSF109604|SSF55021|SSF81301|SSF81593|TIGR01693 NIDE_RS06315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004809|IPR008146|IPR008147|IPR014746|IPR027302|IPR027303 Glutamine synthetase type I|Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0005737|GO:0006542|GO:0006807|GO:0009399 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|PTHR20852|PTHR20852:SF15|SM01230|SSF54368|SSF55931|TIGR00653 NIDE_RS06320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000292|IPR023271 Aquaporin-like|Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF01226|PTHR30520|PTHR30520:SF5 NIDE_RS06325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR003712|IPR008076|IPR010982 Cro/C1-type helix-turn-helix domain|Cyanate hydratase|Cyanate lyase, C-terminal|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0008824|GO:0009439|GO:0043565 G3DSA:1.10.260.40|G3DSA:3.30.1160.10|MF_00535|PF02560|PIRSF001263|PR01693|PTHR34186|PTHR34186:SF2|SM00530|SM01116|SSF47413|SSF55234|TIGR00673 NIDE_RS06330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|SSF46785 NIDE_RS06335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005117|IPR006066|IPR006067 Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.10|PF01077|PF03460|PR00397|PS00365|PTHR32439|PTHR32439:SF0|SSF55124|SSF56014 NIDE_RS06340 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS06345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0005975 G3DSA:3.20.20.80|SSF51445 NIDE_RS06355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|SSF143011 NIDE_RS06360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|PTHR33713|PTHR33713:SF6|SSF143120|TIGR01552 NIDE_RS06375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005190|IPR013546 Glutamate-ammonia ligase adenylyltransferase, repeated domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0008882|GO:0016779 G3DSA:3.30.460.10|PF03710|PF08335|PTHR30621|SSF81301|SSF81593 NIDE_RS06380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005190|IPR013546 Glutamate-ammonia ligase adenylyltransferase, repeated domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0008882|GO:0016779 G3DSA:3.30.460.10|PF03710|PF08335|PTHR30621|SSF81301|SSF81593 NIDE_RS06385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|PTHR11353|SSF48592|SSF52029|SSF54849|TIGR02348 NIDE_RS06390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011032|IPR020818 GroES chaperonin family|GroES-like GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PTHR10772|PTHR10772:SF0|SM00883|SSF50129 NIDE_RS06400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000943|IPR007627|IPR007630|IPR009042|IPR011991|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF00140|PF04542|PF04545|PR00046|PS00715|PTHR30376|SSF88659|SSF88946|TIGR02937 NIDE_RS06405 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23515|PTHR23515:SF4|SSF103473 NIDE_RS06410 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000422|IPR000926|IPR016299|IPR017945|IPR032677 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain|GTP cyclohydrolase II|GTP cyclohydrolase II, RibA|Riboflavin biosynthesis protein RibBA GO:0003935|GO:0008686|GO:0009231 G3DSA:3.90.870.10|MF_00179|MF_00180|MF_01283|PF00925|PF00926|PIRSF001259|PTHR21327|PTHR21327:SF6|SSF142695|SSF55821|TIGR00505|TIGR00506 NIDE_RS06415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|PTHR21058|SSF52121|TIGR00114 NIDE_RS06420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006027|IPR011605 NusB antitermination factor|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|MF_00073|PF01029|PTHR11078|SSF48013|TIGR01951 NIDE_RS06425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000362|IPR004769|IPR008948|IPR019468|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase|Adenylosuccinate lyase C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0009152 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10397|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF2|SM00998|SSF48557|TIGR00928 NIDE_RS06430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010644|IPR011008 Dimeric alpha-beta barrel|Putative heme-dependent peroxidase/Chlorite dismutase G3DSA:3.30.70.1030|G3DSA:3.30.70.1100|PF06778|PTHR36843|PTHR36843:SF1|SSF54909 NIDE_RS06435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001636|IPR013816|IPR018236|IPR028923 ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole-succinocarboxamide synthase|SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0005524|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01057|PS01058|PTHR11609|PTHR11609:SF2|SSF56104|TIGR00081 NIDE_RS06445 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS G3DSA:3.30.1280.10|MF_01926|PD010362|PF02700|PTHR34696|SSF82697|TIGR00302 NIDE_RS06450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010075|IPR029062 Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 G3DSA:3.40.50.880|MF_00421|PF13507|PIRSF001586|PTHR10099|SM01211|SSF52317|TIGR01737 NIDE_RS06455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010074|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine subunit PurL|PurM-like, N-terminal domain GO:0004642|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00420|PF00586|PF02769|PIRSF001587|PTHR10099|PTHR10099:SF2|SSF55326|SSF56042|TIGR01736 NIDE_RS06460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000836|IPR005854|IPR017932|IPR029055|IPR029057 Amidophosphoribosyltransferase|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004044|GO:0009113|GO:0009116 G3DSA:3.40.50.2020|G3DSA:3.60.20.10|MF_01931|PF00156|PF13537|PIRSF000485|PTHR11907|PTHR11907:SF0|SSF53271|SSF56235|TIGR01134 NIDE_RS06465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032708 Microcin J25-processing protein McjB, C-terminal PF13471 NIDE_RS06470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008792 Coenzyme PQQ synthesis D PF05402 NIDE_RS06475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF53795 NIDE_RS06480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF14907 NIDE_RS06495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF14597|SSF56281 NIDE_RS06500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13424|PTHR10098|PTHR10098:SF104|SM00028|SSF48452 NIDE_RS06520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011047|IPR027295 Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily G3DSA:2.140.10.10|SSF50998 NIDE_RS06525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PTHR23083|SM00028|SSF48452 NIDE_RS06530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001650|IPR004609|IPR011545|IPR012340|IPR014001|IPR027417|IPR033454 ATP-dependent DNA helicase RecG|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|RecG, wedge domain GO:0003676|GO:0004003|GO:0005524|GO:0006281|GO:0006310 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00270|PF00271|PF17191|PTHR24031|PTHR24031:SF249|SM00487|SM00490|SSF50249|SSF52540|TIGR00643 NIDE_RS06540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003695 Ppx/GppA phosphatase G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF02541|PTHR30005|SSF53067 NIDE_RS06545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 NIDE_RS06550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008972 Cupredoxin G3DSA:2.60.40.420|SSF49503 NIDE_RS06565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008269|IPR014721|IPR020568|IPR027065 Lon protease|Peptidase S16, Lon C-terminal|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163 G3DSA:3.30.230.10|PF05362|PR00830|PTHR10046|SSF54211 NIDE_RS06570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001646 Pentapeptide repeat PF13576 NIDE_RS06575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003768 Segregation and condensation protein A MF_01805|PF02616|PTHR33969|PTHR33969:SF2 NIDE_RS06595 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644|IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|CBS domain|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01964|PF00478|PF00571|PIRSF000130|PS00487|PTHR11911|PTHR11911:SF6|SM00116|SM01240|SSF51412|SSF54631|TIGR01302 NIDE_RS06600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, N-terminal|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|PR00096|PR00097|PR00099|PTHR11922|PTHR11922:SF2|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 NIDE_RS06605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PTHR21600|PTHR21600:SF2|SM00363|SSF55120|SSF55174|TIGR00093 NIDE_RS06610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR018150|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Aspartate-tRNA ligase, bacterial/mitochondrial-type|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.1360.30|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|PTHR22594|PTHR22594:SF5|SSF50249|SSF55261|SSF55681|TIGR00459 NIDE_RS06615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000453|IPR020541 Chorismate synthase|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|PS00789|PTHR21085|SSF103263|TIGR00033 NIDE_RS06620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002156|IPR012337|IPR022892 Ribonuclease H|Ribonuclease H domain|Ribonuclease H-like domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00042|PF00075|PTHR10642|SSF53098 NIDE_RS06625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF557|SM00382|SSF52540 NIDE_RS06630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF79|SM00228|SSF50156|SSF50494 NIDE_RS06640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PF04228|PTHR30168|SSF55486 NIDE_RS06650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000748|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 PF00849|PS01149|PTHR21600|PTHR21600:SF23|SSF55120|TIGR00093 NIDE_RS06655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005180 Domain of unknown function DUF302 G3DSA:3.30.310.70|PF03625|SSF103247 NIDE_RS06675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004993|IPR020845 AMP-binding, conserved site|GH3 family PF03321|PS00455|PTHR31901|PTHR31901:SF5 NIDE_RS06680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001354|IPR013341|IPR013342|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain|Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PTHR13794|PTHR13794:SF55|SM00922|SSF51604|SSF54826 NIDE_RS06685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000572|IPR005066|IPR014756 Immunoglobulin E-set|Moybdenum cofactor oxidoreductase, dimerisation|Oxidoreductase, molybdopterin-binding domain GO:0016491|GO:0030151|GO:0042128|GO:0055114 G3DSA:2.60.40.650|G3DSA:3.90.420.10|PF00174|PF03404|PTHR19372|SSF56524|SSF81296 NIDE_RS06715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002043|IPR005122|IPR018085 Uracil-DNA glycosylase|Uracil-DNA glycosylase, active site|Uracil-DNA glycosylase-like GO:0004844|GO:0006281|GO:0006284|GO:0016799 G3DSA:3.40.470.10|MF_00148|PF03167|PS00130|PTHR11264|SM00986|SM00987|SSF52141|TIGR00628 NIDE_RS06720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001148|IPR018338|IPR023561 Alpha carbonic anhydrase|Carbonic anhydrase, alpha-class|Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 G3DSA:3.10.200.10|PF00194|PS00162|PTHR18952|PTHR18952:SF122|SM01057|SSF51069 NIDE_RS06730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008869|IPR023094|IPR032710 NTF2-like domain|Toluene tolerance Ttg2/phospholipid-binding protein MlaC|Toluene tolerance protein, alpha-helical G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494|PTHR36573 NIDE_RS06740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001297 Phycobilisome linker domain GO:0015979|GO:0030089 PD000852|PF00427 NIDE_RS06750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000361|IPR016092|IPR017870 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|PF01521|PS01152|PTHR10072|SSF89360|TIGR00049 NIDE_RS06760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR011991|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0015074 G3DSA:1.10.10.10|G3DSA:3.30.420.10|PF00665|PTHR35004|PTHR35004:SF2|SSF53098 NIDE_RS06765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PTHR30050|SM00382|SSF52540 NIDE_RS06770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PTHR32154|PTHR32154:SF4|SSF52518 NIDE_RS06775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PTHR32154|PTHR32154:SF4|SSF52518 NIDE_RS06780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008462 CsbD-like G3DSA:1.10.1470.10|SSF69047 NIDE_RS06785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PTHR23083|SM00028|SSF48452 NIDE_RS06795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021957 Protein of unknown function DUF3574 PF12098 NIDE_RS06805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|PTHR24031|SM00487|SM00490|SSF52540 NIDE_RS06820 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417|IPR029016 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|GAF domain|GAF domain-like|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.40|G3DSA:3.40.50.300|PF00158|PF02954|PF13185|PS00675|PS00676|PS00688|PTHR32071|SM00065|SM00382|SSF46689|SSF52540|SSF55781 NIDE_RS06825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025388 Alginate export domain PF13372 NIDE_RS06835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PF04116|PTHR21624|PTHR21624:SF2 NIDE_RS06840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR007267|IPR029044 Glycosyltransferase 2-like|GtrA-like protein|Nucleotide-diphospho-sugar transferases GO:0000271|GO:0006810|GO:0016021 G3DSA:3.90.550.10|PF00535|PF04138|PTHR10859|PTHR10859:SF37|SSF53448 NIDE_RS06850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000189|IPR008258|IPR023346|IPR024570 Lysozyme-like domain|Murein transglycosylase-C, N-terminal|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|PF01464|PF11873|PS00922|PTHR21666|SSF53955 NIDE_RS06855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008869|IPR023094|IPR032710 NTF2-like domain|Toluene tolerance Ttg2/phospholipid-binding protein MlaC|Toluene tolerance protein, alpha-helical G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494|PTHR36573 NIDE_RS06860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SSF46894|SSF52172 NIDE_RS06870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 NIDE_RS06875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011006 CheY-like superfamily G3DSA:3.40.50.2300|SSF52172 NIDE_RS06885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF458|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS06895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF539|SM00448|SSF52172 NIDE_RS06905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 G3DSA:3.30.160.200|PF00472|PS00745|PTHR11075|SSF75620 NIDE_RS06910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000504|IPR012677 Nucleotide-binding alpha-beta plait domain|RNA recognition motif domain GO:0000166|GO:0003676 G3DSA:3.30.70.330|PF00076|PTHR24012|SM00360|SSF54928 NIDE_RS06915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005804|IPR015876 Fatty acid desaturase domain|Fatty acid desaturase, type 1, core GO:0006629|GO:0016717|GO:0055114 PF00487|PR00075|PTHR11351 NIDE_RS06920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001893 Cysteine-rich Golgi apparatus protein 1 repeat GO:0016020 PF00839 NIDE_RS06925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS06930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004960|IPR011920 Bacterial lipid A biosynthesis acyltransferase|Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 MF_01942|PF03279|PIRSF026649|PTHR30606|PTHR30606:SF5|TIGR02207 NIDE_RS06935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS06940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS06945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PF02405|PTHR30188|PTHR30188:SF4 NIDE_RS06950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|SM00382|SSF52540 NIDE_RS06955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003399 Mce/MlaD PF02470|PTHR33371|SSF58104 NIDE_RS06960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13424|PTHR10098|PTHR10098:SF104|SM00028|SSF48452 NIDE_RS06965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001482|IPR003018|IPR007831|IPR027417|IPR029016 GAF domain|GAF domain-like|General secretory system II, protein E, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005515|GO:0005524|GO:0006810 G3DSA:3.30.450.40|G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PF05157|PS00662|PTHR30258|PTHR30258:SF2|SM00065|SSF160246|SSF52540|SSF55781 NIDE_RS06970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002314|IPR002316|IPR004154|IPR004500|IPR007214|IPR023717 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Proline-tRNA ligase, class IIa|Prolyl-tRNA synthetase, class IIa, bacterial-type|Prolyl-tRNA synthetase, class IIa, type 1|YbaK/aminoacyl-tRNA synthetase-associated domain GO:0000166|GO:0002161|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.930.10|G3DSA:3.40.50.800|G3DSA:3.90.960.10|MF_01569|PF00587|PF03129|PF04073|PIRSF001535|PR01046|PTHR11451|PTHR11451:SF3|SSF52954|SSF55681|SSF55826|TIGR00409 NIDE_RS06975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001478|IPR004387|IPR008915 PDZ domain|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0005515|GO:0006508|GO:0016021 G3DSA:2.30.42.10|PF02163|PF13180|PTHR22939|PTHR22939:SF78|SM00228|SSF50156|TIGR00054 NIDE_RS06980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003821|IPR013512|IPR013644|IPR016040|IPR026877 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|NAD(P)-binding domain GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|PTHR30525|SSF51735|SSF55347|SSF69055|TIGR00243 NIDE_RS06985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 PF01148|PS01315|PTHR13773 NIDE_RS06990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|PTHR10291|SSF64005|TIGR00055 NIDE_RS06995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002510|IPR025502 Metalloprotease TldD/PmbA|TldD GO:0006508|GO:0008237 PF01523|PIRSF004919|PTHR30624|PTHR30624:SF4|SSF111283 NIDE_RS07000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PF01523|PTHR30624|PTHR30624:SF1|SSF111283 NIDE_RS07005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005247|IPR008914 Phosphatidylethanolamine-binding protein|YbhB/YbcL G3DSA:3.90.280.10|PF01161|PTHR30289|PTHR30289:SF0|SSF49777|TIGR00481 NIDE_RS07015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005122|IPR005273 Uracil-DNA glycosylase, family 4 domain|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|PTHR33693|PTHR33693:SF1|SM00986|SM00987|SSF52141|TIGR00758 NIDE_RS07020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PTHR10742|SSF51905 NIDE_RS07025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002060|IPR008949|IPR017828|IPR019845 Isoprenoid synthase domain|Squalene/phytoene synthase|Squalene/phytoene synthase HpnD|Squalene/phytoene synthase, conserved site GO:0009058|GO:0016117|GO:0016740|GO:0016765|GO:0016767 G3DSA:1.10.600.10|PF00494|PS01044|PS01045|PTHR31480|PTHR31480:SF5|SSF48576|TIGR03465 NIDE_RS07030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|PTHR30535|PTHR30535:SF2|SSF53807 NIDE_RS07035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|SSF56784|TIGR01509 NIDE_RS07045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001602 Uncharacterised protein family UPF0047 G3DSA:2.60.120.460|PF01894|PIRSF004681|PTHR30615|PTHR30615:SF2|SSF111038|TIGR00149 NIDE_RS07055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001893 Cysteine-rich Golgi apparatus protein 1 repeat GO:0016020 PF00839 NIDE_RS07060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000253|IPR008984 Forkhead-associated (FHA) domain|SMAD/FHA domain GO:0005515 G3DSA:2.60.200.20|PF00498|PTHR23308|SM00240|SSF49879 NIDE_RS07065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001932|IPR015655 PPM-type phosphatase domain|Protein phosphatase 2C family GO:0003824|GO:0004722|GO:0006470 G3DSA:3.60.40.10|PF13672|PTHR13832|PTHR13832:SF278|SM00331|SM00332|SSF81606 NIDE_RS07075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003141|IPR004013|IPR016195 PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260 G3DSA:3.20.20.140|PF02811|PTHR30007|PTHR30007:SF4|SM00481|SSF89550 NIDE_RS07100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029030 Caspase-like domain G3DSA:3.40.50.1460|PF00656|PTHR31773|PTHR31773:SF8 NIDE_RS07115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006474|IPR006483|IPR014001|IPR027417 CRISPR-associated Cas3-HD domain|Helicase Cas3, CRISPR-associated, core|Helicase superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SM00487|SSF52540|TIGR01587|TIGR01596 NIDE_RS07120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013381 CRISPR-associated protein Cse1 PF09481|TIGR02547 NIDE_RS07125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013382 CRISPR-associated protein Cse2 PF09485|TIGR02548 NIDE_RS07130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010148 CRISPR-associated protein, CT1975 PF09344|TIGR01869 NIDE_RS07135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010147|IPR013422|IPR021124 CRISPR-associated protein Cas5, N-terminal|CRISPR-associated protein, Cas5|CRISPR-associated protein, CasD GO:0003723|GO:0043571|GO:0051607 PF09704|TIGR01868|TIGR02593 NIDE_RS07140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010179 CRISPR-associated protein Cse3 G3DSA:3.30.70.1200|G3DSA:3.30.70.1210|PF08798|SM01101|SSF117987|TIGR01907 NIDE_RS07145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002729|IPR019851 CRISPR-associated protein Cas1|CRISPR-associated protein Cas1, ECOLI subtype MF_01470|PF01867|TIGR00287|TIGR03638 NIDE_RS07150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010152 CRISPR-associated protein Cas2 subtype PF09707|TIGR01873 NIDE_RS07160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR031807 HicB-like antitoxin of toxin-antitoxin system PF15919|PTHR34504|PTHR34504:SF2|SSF143100 NIDE_RS07165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012893|IPR012894|IPR017508 HipA, N-terminal subdomain 1|HipA, N-terminal subdomain 2|HipA-like, C-terminal PF07804|PF07805|PF13657|PTHR37419|TIGR03071 NIDE_RS07180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007379|IPR032710 NTF2-like domain|Tim44-like domain PF04280|PTHR41542|PTHR41542:SF1|SM00978|SSF54427 NIDE_RS07185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PF13439|SSF53756 NIDE_RS07190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF316|SM00448|SM00862|SSF52172 NIDE_RS07195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 NIDE_RS07215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007383 Protein of unknown function DUF445 PF04286|PTHR38442 NIDE_RS07225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PTHR11958|SSF118215 NIDE_RS07230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011044|IPR015943 Quinoprotein amine dehydrogenase, beta chain-like|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF50969 NIDE_RS07235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002820|IPR023045|IPR023046 Molybdenum cofactor biosynthesis C|Molybdenum cofactor biosynthesis C, bacterial-type|Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 G3DSA:3.30.70.640|MF_01224_B|PF01967|PTHR22960|SSF55040|TIGR00581 NIDE_RS07240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003749|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|PTHR33359|SSF54285 NIDE_RS07245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 G3DSA:3.90.1170.40|PF02391|PTHR23404|PTHR23404:SF2|SSF54690 NIDE_RS07250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000385|IPR006638|IPR007197|IPR010505|IPR013483|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Molybdenum cofactor biosynthesis protein A|Molybdenum cofactor synthesis C-terminal|Radical SAM GO:0003824|GO:0006777|GO:0019008|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_01225_B|PF04055|PF06463|PF13394|PS01305|PTHR22960|SM00729|SSF102114|TIGR02666 NIDE_RS07255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 PF03824 NIDE_RS07260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000396|IPR001279 Cyclic-AMP phosphodiesterase, class-II|Metallo-beta-lactamase GO:0004115|GO:0006198 G3DSA:3.60.15.10|PF12706|PR00388|SSF56281 NIDE_RS07265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000022|IPR000438|IPR029045 Acetyl-CoA carboxylase carboxyl transferase, beta subunit|Carboxyl transferase|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_01395|PF01039|PR01070|PTHR22855|PTHR22855:SF17|SSF52096|TIGR00515 NIDE_RS07275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001645|IPR004101|IPR013221|IPR018109 Folylpolyglutamate synthetase|Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF02875|PF08245|PIRSF001563|PS01012|PTHR11136|PTHR11136:SF0|SSF53244|SSF53623|TIGR01499 NIDE_RS07280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007543|IPR020889 LPS-assembly protein LptD|Organic solvent tolerance protein, C-terminal GO:0009279|GO:0010033|GO:0015920|GO:0019867|GO:0043165|GO:0061024 G3DSA:2.60.450.10|MF_01411|PF04453|PTHR30189 NIDE_RS07285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10 NIDE_RS07290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|PTHR10438|SSF52833|TIGR01068 NIDE_RS07295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003395|IPR004604|IPR025662|IPR027417 DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal|Sigma-54 interaction domain, ATP-binding site 1 GO:0005524|GO:0006281|GO:0006310 G3DSA:3.40.50.300|PF02463|PIRSF003128|PS00675|PTHR11059|SSF52540|TIGR00634 NIDE_RS07300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR003607|IPR006674|IPR006675|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|HDIG domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF00072|PF13487|PTHR26402|SM00448|SM00471|SSF109604|SSF52172|TIGR00277 NIDE_RS07305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS07315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001789|IPR003594|IPR009875|IPR011006|IPR013216|IPR013767|IPR022742|IPR029058|IPR029063 Alpha/Beta hydrolase fold|CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Methyltransferase type 11|PAS domain|PAS fold|PilZ domain|S-adenosyl-L-methionine-dependent methyltransferase|Serine aminopeptidase, S33|Signal transduction response regulator, receiver domain GO:0000160|GO:0006355|GO:0008152|GO:0008168|GO:0035438 G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.150|G3DSA:3.40.50.1820|G3DSA:3.40.50.2300|PF00072|PF00989|PF07238|PF08241|PF12146|PTHR10108|PTHR10108:SF779|SM00091|SSF141371|SSF52172|SSF53335|SSF53474|SSF55785|SSF55874|TIGR00229 NIDE_RS07325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF13474|SSF54427 NIDE_RS07330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001932|IPR015655 PPM-type phosphatase domain|Protein phosphatase 2C family GO:0003824|GO:0004722|GO:0006470 G3DSA:3.60.40.10|PF13672|PTHR13832|PTHR13832:SF278|SM00331|SM00332|SSF81606 NIDE_RS07335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF13482|PTHR38462|SSF53098 NIDE_RS07340 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025658|IPR029000 Cyclophilin TM1367-like domain|Cyclophilin-like domain PF04126|SSF50891 NIDE_RS07345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007463 Protein of unknown function DUF507 PF04368 NIDE_RS07350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007463 Protein of unknown function DUF507 PF04368 NIDE_RS07355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF14559|SM00028|SSF48452 NIDE_RS07360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|PTHR10681|SSF52833 NIDE_RS07370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10 NIDE_RS07375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|PTHR24322|PTHR24322:SF317|SSF51735 NIDE_RS07395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025737 MetA-pathway of phenol degradation, putative PF13557 NIDE_RS07400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|PTHR30173|PTHR30173:SF24|SSF88659|SSF88946|TIGR02937 NIDE_RS07430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|SSF52266 NIDE_RS07435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|SSF53756 NIDE_RS07440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain G3DSA:2.115.10.20|SSF75005 NIDE_RS07450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR005666|IPR008995|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Sulphate transport system permease protein 1 GO:0005524|GO:0006810|GO:0016020|GO:0016887|GO:0042626 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF123|SM00382|SSF50331|SSF52540|TIGR00968 NIDE_RS07455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000515|IPR005667 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2 GO:0006810|GO:0008272|GO:0015419|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30406|PTHR30406:SF1|SSF161098|TIGR00969 NIDE_RS07460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000515|IPR005667|IPR011865 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysT GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30406|PTHR30406:SF6|SSF161098|TIGR00969|TIGR02139 NIDE_RS07465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 G3DSA:3.40.190.10|PF13531|PTHR30368|PTHR30368:SF2|SSF53850|TIGR00971 NIDE_RS07470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000944|IPR011991|IPR030489 Transcription regulator Rrf2-type|Transcription regulator Rrf2-type, conserved site|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PS01332|PTHR33221|PTHR33221:SF1|SSF46785|TIGR00738 NIDE_RS07480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013406 Conserved hypothetical protein CHP02574, addiction module PF09720 NIDE_RS07495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 G3DSA:1.20.58.180|G3DSA:3.30.930.10|MF_00254|PF02091|PR01044|PTHR30075|SSF55681|TIGR00388 NIDE_RS07500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 MF_00255|PF02092|PR01045|PTHR30075|SSF109604|TIGR00211 NIDE_RS07510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000121|IPR002192|IPR008279|IPR010121|IPR013815|IPR013816|IPR015813|IPR018274|IPR023151 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate, phosphate dikinase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005524|GO:0006090|GO:0016301|GO:0016310|GO:0016772|GO:0050242 G3DSA:1.10.189.10|G3DSA:1.20.80.30|G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PIRSF000853|PS00370|PS00742|PTHR22931|PTHR22931:SF9|SSF51621|SSF52009|SSF56059|TIGR01828 NIDE_RS07515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002125|IPR002734|IPR004794|IPR011549|IPR016193|IPR024072 Bacterial bifunctional deaminase-reductase, C-terminal|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like|Dihydrofolate reductase-like domain|Riboflavin biosynthesis protein RibD|Riboflavin-specific deaminase, C-terminal GO:0003824|GO:0008270|GO:0008703|GO:0008835|GO:0009231|GO:0050661|GO:0055114 G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|PTHR11079|PTHR11079:SF10|SSF53597|SSF53927|TIGR00227|TIGR00326 NIDE_RS07520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|PTHR10655|SSF53474 NIDE_RS07530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 NIDE_RS07535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|PTHR23501|SSF103473 NIDE_RS07540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001783|IPR017938|IPR023366|IPR026017 ATP synthase subunit alpha-like domain|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.20|PF00677|PIRSF000498|PTHR21098|SSF63380|TIGR00187 NIDE_RS07545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002909|IPR013783|IPR014756 IPT domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0005515 G3DSA:2.60.40.10|PF01833|SSF81296 NIDE_RS07550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000873|IPR011904|IPR020845|IPR025110|IPR032387 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acetate-CoA ligase|Acetyl-coenzyme A synthetase, N-terminal domain GO:0003824|GO:0003987|GO:0008152|GO:0016208|GO:0019427 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PF16177|PS00455|PTHR24095|SSF56801|TIGR02188 NIDE_RS07555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734|IPR029030 Caspase-like domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.1460|PF00656|PF13432|PTHR23083|SM00028|SSF48452|SSF52129 NIDE_RS07565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014094 Penicillin-binding protein activator LpoB PF13036 NIDE_RS07570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10 NIDE_RS07575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024952 Lipoprotein LPP20-like PF02169 NIDE_RS07585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029060 PIN domain-like SSF88723 NIDE_RS07600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000304|IPR008927|IPR016040|IPR028939|IPR029036 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Pyrroline-5-carboxylate reductase|Pyrroline-5-carboxylate reductase, catalytic, N-terminal|Pyrroline-5-carboxylate reductase, dimerisation domain GO:0004735|GO:0006561|GO:0055114 G3DSA:1.10.3730.10|G3DSA:3.40.50.720|MF_01925|PF03807|PF14748|PIRSF000193|PS00521|PTHR11645|PTHR11645:SF0|SSF48179|SSF51735|TIGR00112 NIDE_RS07610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 NIDE_RS07615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 NIDE_RS07620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004107|IPR011010|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase/recombinase, N-terminal GO:0003677|GO:0015074 G3DSA:1.10.150.130|PF14659|SSF56349 NIDE_RS07655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases SSF53448 NIDE_RS07670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011766|IPR012000|IPR012001|IPR012110|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate (TPP)-dependent enzyme|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0016831|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PIRSF036565|PTHR18968|PTHR18968:SF4|SSF52467|SSF52518 NIDE_RS07675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002478|IPR015947|IPR019614|IPR029063 PUA domain|PUA-like domain|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosylmethionine-dependent methyltransferase GO:0003723|GO:0008168 G3DSA:2.30.130.10|G3DSA:3.30.750.80|G3DSA:3.40.50.150|PF10672|PTHR11061|PTHR11061:SF12|SM00359|SSF53335|SSF88697 NIDE_RS07680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004813|IPR004814 Oligopeptide transporter OPT|Oligopeptide transporter, OPT superfamily GO:0055085 PF03169|PTHR31645|PTHR31645:SF0|TIGR00728|TIGR00733 NIDE_RS07685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 NIDE_RS07695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001537|IPR013123|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PF08032|PTHR12029|SM00967|SSF55315|SSF75217 NIDE_RS07700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR004504|IPR014721|IPR020568|IPR027417 AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF13481|PF13541|PR01874|PTHR32472|PTHR32472:SF10|SM00382|SSF52540|SSF54211|TIGR00416 NIDE_RS07705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:2.50.20.10 NIDE_RS07710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000905|IPR022496 Gcp-like domain|tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 G3DSA:3.30.420.40|PF00814|PTHR11735|PTHR11735:SF11|SSF53067|TIGR03725 NIDE_RS07715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR006464|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0008080|GO:0016407 G3DSA:3.40.630.30|PF00583|PTHR23091|PTHR23091:SF1|SSF55729|TIGR01575 NIDE_RS07720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007420 Protein of unknown function DUF465 PF04325 NIDE_RS07725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MF_00902|PF00902|PR01840|PTHR30371|PTHR30371:SF0|TIGR00945 NIDE_RS07730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011040 Sialidases G3DSA:2.130.10.140|SSF50939 NIDE_RS07735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PR00153|PS00170|PTHR11071|SSF50891 NIDE_RS07745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF4|SSF56954 NIDE_RS07750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF4|SSF111369|TIGR01730 NIDE_RS07755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866 NIDE_RS07760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS07770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010290|IPR020846|IPR022324 Bacilysin exporter BacE, putative|Major facilitator superfamily domain|Transmembrane secretion effector GO:0016020|GO:0042891 G3DSA:1.20.1250.20|PF05977|PR01988|PTHR23513|PTHR23513:SF11|SSF103473 NIDE_RS07775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010290|IPR020846|IPR022324 Bacilysin exporter BacE, putative|Major facilitator superfamily domain|Transmembrane secretion effector GO:0016020|GO:0042891 G3DSA:1.20.1250.20|PF05977|PR01988|PTHR23513|SSF103473 NIDE_RS07790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:2.50.20.10 NIDE_RS07815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 NIDE_RS07820 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF13524|SSF53756 NIDE_RS07825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR013765|IPR020584|IPR023400|IPR027417 AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094 G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|PTHR22942|PTHR22942:SF1|SM00382|SSF52540|SSF54752|TIGR02012 NIDE_RS07830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003783|IPR011991 Regulatory protein RecX|Winged helix-turn-helix DNA-binding domain GO:0006282 G3DSA:1.10.10.10|MF_01114|PF02631|PTHR33602|PTHR33602:SF1 NIDE_RS07835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation protein, beta-barrel domain GO:0000166|GO:0003676|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0016876|GO:0043039 G3DSA:3.30.930.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|PTHR11777|PTHR11777:SF9|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 NIDE_RS07845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003770|IPR013087 Uncharacterised protein family UPF0755, YceG-like|Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 G3DSA:3.30.160.60|PF02618|PTHR30518|PTHR30518:SF2|TIGR00247 NIDE_RS07850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002915|IPR011343|IPR013785|IPR028581 Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase|Deoxyribose-phosphate aldolase|Deoxyribose-phosphate aldolase type I GO:0003824|GO:0004139|GO:0005737|GO:0009264|GO:0016829 G3DSA:3.20.20.70|MF_00114|PF01791|PIRSF001357|PTHR10889|SM01133|SSF51569|TIGR00126 NIDE_RS07855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006124|IPR010045|IPR017849|IPR017850|IPR024052 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Metalloenzyme|Phosphopentomutase|Phosphopentomutase DeoB cap domain GO:0000287|GO:0003824|GO:0005737|GO:0008152|GO:0008973|GO:0009117|GO:0043094|GO:0046872 G3DSA:3.30.70.1250|G3DSA:3.40.720.10|PF01676|PIRSF001491|PTHR21110|PTHR21110:SF0|SSF143856|SSF53649 NIDE_RS07865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006530|IPR031325 RHS repeat|YD repeat PF05593|PTHR32305|PTHR32305:SF6|SSF63829|TIGR01643 NIDE_RS07870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001826|IPR006530|IPR013320|IPR022385|IPR031325 Concanavalin A-like lectin/glucanase domain|RHS protein|RHS repeat|Rhs repeat-associated core|YD repeat GO:0097264 G3DSA:2.60.120.200|PF05593|PF13385|PR00394|PTHR11219|PTHR11219:SF46|SSF49899|TIGR01643|TIGR03696 NIDE_RS07880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006530|IPR031325 RHS repeat|YD repeat PF05593|TIGR01643 NIDE_RS07885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007711 Toxin HigB-1 PF05015|PTHR40266|PTHR40266:SF2|SSF143011 NIDE_RS07890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR010982|IPR013430 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Toxin-antitoxin system, antidote protein, HigA GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR36924|PTHR36924:SF2|SM00530|SSF47413|TIGR02607 NIDE_RS07905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF14588|PTHR11803|PTHR11803:SF2|SSF55298 NIDE_RS07910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002909|IPR013783|IPR014756 IPT domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0005515 G3DSA:2.60.40.10|PF01833|SSF81296 NIDE_RS07915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain G3DSA:2.130.10.140|PF14870|SSF110296 NIDE_RS07920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006700|IPR015947|IPR029026|IPR029028 Alpha/beta knot methyltransferases|PUA-like domain|Ribosomal RNA small subunit methyltransferase E|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0006364|GO:0008168 G3DSA:3.40.1280.10|PF04452|PIRSF015601|PTHR30027|PTHR30027:SF3|SSF75217|SSF88697|TIGR00046 NIDE_RS07925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724 Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PTHR24078|PTHR24078:SF190|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349 NIDE_RS07930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|PTHR19375|PTHR19375:SF173|SSF100920|SSF100934|SSF53067|TIGR02350 NIDE_RS07935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|PTHR21237|SSF51064|SSF58014 NIDE_RS07940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004619 Type III pantothenate kinase GO:0004594 G3DSA:3.30.420.40|MF_01274|PF03309|PTHR34265|SSF53067|TIGR00671 NIDE_RS07945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004143|IPR004408 Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0004077|GO:0006464 G3DSA:3.30.930.10|PF03099|PTHR12835|SSF55681|TIGR00121 NIDE_RS07950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002638|IPR004393|IPR013785|IPR022412|IPR027277 Aldolase-type TIM barrel|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|PTHR32179|SSF51690|SSF54675|TIGR00078 NIDE_RS07955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase, tRNA-binding arm|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|tRNA-binding arm GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438 G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|PTHR11946|PTHR11946:SF5|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422 NIDE_RS07960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 NIDE_RS07965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006439|IPR011949|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|HAD-superfamily hydrolase, subfamily IA, REG-2-like GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|PTHR12725|PTHR12725:SF74|SSF56784|TIGR01509|TIGR01549|TIGR02252 NIDE_RS07970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003000|IPR026591|IPR027546|IPR029035 DHS-like NAD/FAD-binding domain|Sirtuin family|Sirtuin family, catalytic core small domain|Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 G3DSA:3.30.1600.10|G3DSA:3.40.50.1220|MF_01121|PF02146|PTHR11085|SSF52467 NIDE_RS07975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000572|IPR003710|IPR008927|IPR013328|IPR013332|IPR013752|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Ketopantoate reductase ApbA/PanE|Ketopantoate reductase, C-terminal domain|Ketopantoate reductase, N-terminal domain|NAD(P)-binding domain|Oxidoreductase, molybdopterin-binding domain GO:0005737|GO:0008677|GO:0015940|GO:0016491|GO:0042128|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|G3DSA:3.90.420.10|PF00174|PF02558|PF08546|PTHR21708|PTHR21708:SF24|SSF48179|SSF51735|SSF56524|TIGR00745 NIDE_RS07980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF95|TIGR00797 NIDE_RS07985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021301 Domain of unknown functionDUF2779 PF11074 NIDE_RS07995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000873|IPR001031|IPR001242|IPR006162|IPR009081|IPR010071|IPR020806|IPR020845|IPR025110|IPR029058 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Alpha/Beta hydrolase fold|Amino acid adenylation domain|Condensation domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain|Thioesterase GO:0003824|GO:0008152|GO:0009058|GO:0016788|GO:0031177 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.1820|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF00975|PF13193|PF13745|PS00012|PS00455|PTHR24095|PTHR24095:SF137|SM00823|SSF47336|SSF52777|SSF53474|SSF56801|TIGR01733 NIDE_RS08000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR005898|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|Cyclic peptide transporter|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0015197|GO:0015833|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24220|PTHR24220:SF425|SM00382|SSF52540|SSF90123|TIGR01194 NIDE_RS08005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 G3DSA:3.90.470.20|PF01648|PTHR12215|SSF56214 NIDE_RS08010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016192|IPR016193|IPR028883 APOBEC/CMP deaminase, zinc-binding|Cytidine deaminase-like|tRNA-specific adenosine deaminase GO:0002100|GO:0003824|GO:0008251|GO:0008270|GO:0016787 G3DSA:3.40.140.10|MF_00972|PF14437|PS00903|PTHR11079|PTHR11079:SF72|SSF53927 NIDE_RS08015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 PF10099|PTHR37461 NIDE_RS08020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF16|SSF88659|SSF88946|TIGR02937 NIDE_RS08025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:3.40.50.2000|PTHR38134|SSF53756 NIDE_RS08035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF14559|SSF48452 NIDE_RS08040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13424|PTHR10098|SM00028|SSF48452 NIDE_RS08050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PTHR10681|PTHR10681:SF91|SSF52833 NIDE_RS08055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|PF03372|SSF56219 NIDE_RS08065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013976 Metal-dependent hydrolase HDOD G3DSA:1.10.3150.10|PF08668|PTHR33525|PTHR33525:SF3|SSF109604 NIDE_RS08075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008217 Ccc1 family PF01988|PTHR31851|PTHR31851:SF11 NIDE_RS08080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000415 Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PTHR23026|PTHR23026:SF102|SSF55469 NIDE_RS08090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025693 Glycine-zipper-containing OmpA-like membrane domain PF13436 NIDE_RS08095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006976 VanZ-like PF04892 NIDE_RS08100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS08105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF24|SSF82693|SSF82714|SSF82866|TIGR00914 NIDE_RS08110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF4|SSF111369|TIGR01730 NIDE_RS08115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|PTHR30203:SF1|SSF56954 NIDE_RS08125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001516|IPR001750 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PF00361|PF00662|PR01434|PTHR22773|PTHR22773:SF67 NIDE_RS08130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018752 Uncharacterised protein family UPF0753 MF_01871|PF10070|PTHR38344|PTHR38344:SF1 NIDE_RS08135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002187|IPR011322|IPR015867 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|SM00938|SSF54913 NIDE_RS08140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR003018|IPR003594|IPR003661|IPR004358|IPR013767|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF00989|PF01590|PF02518|PF13426|PR00344|PTHR24423|SM00065|SM00086|SM00091|SM00387|SSF47384|SSF55781|SSF55785|SSF55874|TIGR00229 NIDE_RS08145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PS00675|PS00676|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS08150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018745 Domain of unknown function DUF2294 PF10057 NIDE_RS08170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024442|IPR024445 ISXO2-like transposase domain|Transposase, zinc-ribbon PF12760|PF12762|SM01126 NIDE_RS08175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13276|PTHR32552|SSF53098 NIDE_RS08185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 NIDE_RS08230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 SSF69917 NIDE_RS08240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001650|IPR012961|IPR027417 ATP-dependent RNA helicase Ski2, C-terminal|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF00271|PF08148|SM00490|SM01142|SSF52540 NIDE_RS08245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005835|IPR005836|IPR011004|IPR011831|IPR023049|IPR029044 ADP-glucose pyrophosphorylase, conserved site|Glucose-1-phosphate adenylyltransferase|Glucose-1-phosphate adenylyltransferase GlgC, bacterial|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|Trimeric LpxA-like GO:0005978|GO:0008878|GO:0009058|GO:0016779 G3DSA:3.90.550.10|MF_00624|PF00483|PS00809|PTHR22572|PTHR22572:SF10|SSF51161|SSF53448|TIGR02091 NIDE_RS08255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PTHR24220|PTHR24220:SF150|SM00382|SSF50331|SSF52540 NIDE_RS08260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30193|PTHR30193:SF10|SSF161098 NIDE_RS08265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30222|PTHR30222:SF7|SSF161098 NIDE_RS08270 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 G3DSA:3.40.190.10|PF13416|PIRSF019574|PR00909|PTHR30222|PTHR30222:SF5|SSF53850 NIDE_RS08275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|PTHR30203:SF1|SSF56954 NIDE_RS08280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF4|SSF111369|TIGR01730 NIDE_RS08285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF12|SSF82693|SSF82714|SSF82866|TIGR00914 NIDE_RS08290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|SM00567|SSF48371 NIDE_RS08295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|PTHR10458|SSF56420|TIGR00079 NIDE_RS08300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 NIDE_RS08310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009288|IPR013024|IPR017939 Butirosin biosynthesis, BtrG-like|Gamma-glutamylcyclotransferase|Gamma-glutamylcyclotransferase, AIG2-like GO:0003839|GO:0006750 G3DSA:3.10.490.10|PF06094|PTHR12935|PTHR12935:SF4|SSF110857 NIDE_RS08320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000555|IPR028090 JAB domain, prokaryotic|JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 G3DSA:3.40.140.10|PF14464|PTHR34858|PTHR34858:SF1|SM00232|SSF102712 NIDE_RS08325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|PTHR10953|PTHR10953:SF153|SSF69572 NIDE_RS08330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018449 NIL domain G3DSA:3.30.70.260|PF09383|SM00930|SSF55021 NIDE_RS08335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003749|IPR010038|IPR012675|IPR016155 Beta-grasp domain|MoaD, archaeal-type|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|PTHR38031|PTHR38031:SF1|SSF54285|TIGR01687 NIDE_RS08340 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001926|IPR004450|IPR026260 Threonine synthase, bacterial/archaeal|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004795|GO:0009088 G3DSA:3.40.50.1100|PF00291|PIRSF038945|PTHR10314|PTHR10314:SF96|SSF53686|TIGR00260 NIDE_RS08345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|PTHR10953|PTHR10953:SF153|SSF69572 NIDE_RS08350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001926|IPR005856|IPR005859 Cysteine synthase|Cysteine synthase CysK|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004124|GO:0006535 G3DSA:3.40.50.1100|PF00291|PTHR10314|PTHR10314:SF110|SSF53686|TIGR01136|TIGR01139 NIDE_RS08355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003749|IPR010035|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiS, thiamine-biosynthesis|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|PTHR34472|PTHR34472:SF1|SSF54285|TIGR01683 NIDE_RS08365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025202 Phospholipase D-like domain G3DSA:3.30.870.10|PF13091|PTHR21248|SSF56024 NIDE_RS08370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|SSF51905 NIDE_RS08375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:3.30.460.10|SSF81301 NIDE_RS08380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007621 TPM domain PF04536|PTHR30373|PTHR30373:SF2 NIDE_RS08400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 NIDE_RS08405 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 NIDE_RS08415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|PTHR31964:SF26|SSF52402 NIDE_RS08420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS08430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain SSF46785 NIDE_RS08440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 NIDE_RS08455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR031849 Domain of unknown function DUF5069 PF16798 NIDE_RS08460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021809 Protein of unknown function DUF3386 PF11866 NIDE_RS08470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003769|IPR014719 Adaptor protein ClpS, core|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GO:0030163 G3DSA:3.30.1390.10|PF02617|PTHR33473|PTHR33473:SF3|SSF54736 NIDE_RS08485 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004559|IPR006638|IPR007197|IPR010723|IPR023404 Coproporphyrinogen III oxidase, oxygen-independent related|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|PF06969|PTHR13932|SM00729|SSF102114|TIGR00539 NIDE_RS08495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PF09723|SM00834|TIGR02605 NIDE_RS08510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF50|SM00448|SSF52172 NIDE_RS08515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR008207|IPR011006 CheY-like superfamily|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0004871 G3DSA:1.20.120.160|G3DSA:3.40.50.2300|PF00072|PF01627|PTHR24423|PTHR24423:SF477|SM00073|SM00448|SSF47226|SSF52172 NIDE_RS08520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS08525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016084|IPR028201 Haem oxygenase-like, multi-helical|PqqC-like protein G3DSA:1.20.910.10|PF14518|SM01236|SSF48613 NIDE_RS08535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007864|IPR011322|IPR018551 Domain of unknown function DUF2007|Nitrogen regulatory PII-like, alpha/beta|Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 G3DSA:3.30.70.790|PF09413|SSF54913 NIDE_RS08555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000489|IPR003726|IPR003759|IPR004223|IPR006158|IPR011005|IPR011822 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-binding module, cap domain|Cobalamin-dependent methionine synthase|Dihydropteroate synthase-like|Homocysteine-binding domain|Pterin-binding domain|Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419|GO:0042558|GO:0044237|GO:0046872 G3DSA:1.10.1240.10|G3DSA:3.10.196.10|G3DSA:3.20.20.20|G3DSA:3.20.20.330|G3DSA:3.40.50.280|PF00809|PF02310|PF02574|PF02607|PF02965|PIRSF000381|PTHR21091|PTHR21091:SF97|SM01018|SSF47644|SSF51717|SSF52242|SSF56507|SSF82282|TIGR02082 NIDE_RS08565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR003607|IPR006674|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF00072|PF13487|PTHR26402|SM00448|SM00471|SSF109604|SSF52172 NIDE_RS08570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001247|IPR002381|IPR015847|IPR018336|IPR020568|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|PNPase/RNase PH domain|Ribonuclease PH, conserved site|Ribonuclease phosphorolytic, bacterial-type|Ribosomal protein S5 domain 2-type fold GO:0000049|GO:0004549|GO:0008033 G3DSA:3.30.230.70|MF_00564|PF01138|PF03725|PS01277|PTHR11953|PTHR11953:SF0|SSF54211|SSF55666|TIGR01966 NIDE_RS08585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006665|IPR008023 OmpA-like domain|Protein of unknown function DUF748 G3DSA:3.30.1330.60|PF05359 NIDE_RS08590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001646|IPR016933 Pentapeptide repeat|Pentapeptide repeat-containing uncharacterised conserved protein UCP029688 PF00805|PIRSF029688|SSF141571 NIDE_RS08595 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000866|IPR012336|IPR019479|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.30.1020.10|G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|PTHR10681|PTHR10681:SF99|SSF52833 NIDE_RS08605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006638|IPR007197|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|PTHR11918|PTHR11918:SF64|SM00729|SSF102114 NIDE_RS08610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006674|IPR021812 HD domain|Protein of unknown function DUF3391 G3DSA:1.10.3210.10|PF11871|PF13487|SSF109604 NIDE_RS08615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000685|IPR017443 Ribulose bisphosphate carboxylase, large subunit, C-terminal|Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0000287|GO:0015977|GO:0016984 G3DSA:3.20.20.110|G3DSA:3.30.70.150|PF00016|PTHR23321|PTHR23321:SF19|SSF51649|SSF54966 NIDE_RS08620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 G3DSA:3.50.30.50|PF04199|PTHR31118|PTHR31118:SF9|SSF102198 NIDE_RS08630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001853|IPR012336 DSBA-like thioredoxin domain|Thioredoxin-like fold GO:0015035 G3DSA:3.40.30.10|PF01323|SSF52833 NIDE_RS08635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 NIDE_RS08650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002579|IPR011057|IPR028427 Mss4-like|Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MrsB GO:0006979|GO:0016671|GO:0030091|GO:0033743|GO:0055114 G3DSA:2.170.150.20|PF01641|PTHR10173|PTHR10173:SF18|SSF51316|TIGR00357 NIDE_RS08655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027065|IPR027417|IPR027543 AAA+ ATPase domain|ATP-dependent protease La (LON), substrate-binding domain|ATPase, AAA-type, core|Lon protease|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163|GO:0043565 G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|PTHR10046|PTHR10046:SF24|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 NIDE_RS08665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 G3DSA:3.40.50.2000|PF00982|PTHR10788|PTHR10788:SF6|SSF53756 NIDE_RS08670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000241|IPR004114|IPR029063 Putative RNA methylase domain|S-adenosyl-L-methionine-dependent methyltransferase|THUMP domain GO:0003723 G3DSA:3.40.50.150|PF01170|PF02926|PS01261|PTHR14911|PTHR14911:SF13|SM00981|SSF53335 NIDE_RS08675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000086|IPR015797|IPR019761|IPR020084|IPR020476|IPR029401 DNA-directed RNA polymerase M, 15kDa subunit, conserved site|NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Nudix hydrolase, N-terminal GO:0016787 G3DSA:2.20.70.10|G3DSA:3.90.79.10|PF00293|PF14803|PR00502|PS00893|PS01030|PTHR22769|PTHR22769:SF17|SSF55811 NIDE_RS08680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000361 FeS cluster biogenesis G3DSA:2.60.300.12|PF01521|SSF89360 NIDE_RS08685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|SSF143011 NIDE_RS08695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002052|IPR003356|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|PTHR30195|PTHR30195:SF10|SSF53335 NIDE_RS08700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009362 Protein of unknown function DUF1016 PF06250|PTHR30547|PTHR30547:SF5 NIDE_RS08705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF6|SSF116734 NIDE_RS08710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006935|IPR007409|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0005524|GO:0006304|GO:0016787 G3DSA:3.40.50.300|PF04313|PF04851|PTHR30195|PTHR30195:SF13|SM00487|SSF52540 NIDE_RS08715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF9|SSF88659|SSF88946|TIGR02937 NIDE_RS08725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PF08843 NIDE_RS08730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004843|IPR014576|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Predicted phosphoesterase, YhaO type GO:0016787 G3DSA:3.60.21.10|PF00149|PIRSF033091|PTHR30337|PTHR30337:SF7|SSF56300 NIDE_RS08735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13514|PTHR41259|PTHR41259:SF1|SSF52540 NIDE_RS08740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655|IPR013656 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08447|PF08448|PR00344|PTHR24423|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 NIDE_RS08745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|SM00822|SSF51735 NIDE_RS08755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS08770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000445|IPR003265|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PF00633|PF00730|PIRSF001435|PTHR10359|SM00478|SSF48150 NIDE_RS08775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000086|IPR003561|IPR015797|IPR020084|IPR020476 Mutator MutT|NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0006281|GO:0008413|GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|PTHR22769|PTHR22769:SF35|SSF55811|TIGR00586 NIDE_RS08780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012337|IPR019288 Predicted 3'-5' exonuclease, PolB-like|Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF10108|SSF53098 NIDE_RS08790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002792|IPR005839|IPR006463|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe|TRAM domain|tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0003824|GO:0005737|GO:0006400|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|MF_01864|PF00919|PF01938|PF04055|PS01278|PTHR11918|PTHR11918:SF43|SM00729|SSF102114|TIGR00089|TIGR01574 NIDE_RS08795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005839|IPR006467|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|MiaB-like tRNA modifying enzyme|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|PF00919|PF04055|PS01278|PTHR11918|PTHR11918:SF45|SM00729|SSF102114|TIGR00089|TIGR01579 NIDE_RS08805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|SSF52402 NIDE_RS08810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|SSF53474 NIDE_RS08815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|PTHR31964:SF45|SSF52402 NIDE_RS08820 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008972|IPR028096 Cupredoxin|EfeO-type cupredoxin-like domain G3DSA:2.60.40.420|PF13473|SSF49503 NIDE_RS08830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 NIDE_RS08840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002023|IPR012336 NADH-quinone oxidoreductase subunit E-like|Thioredoxin-like fold GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF01257|PIRSF000216|PTHR10371|SSF52833 NIDE_RS08845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001949|IPR011538|IPR019554|IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Soluble ligand binding domain GO:0008137|GO:0010181|GO:0051539|GO:0055114 PF01512|PF10531|PF10589|PS00645|PTHR11780|PTHR11780:SF0|SM00928|SSF140490|SSF142019|SSF142984 NIDE_RS08850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000283|IPR001041|IPR006478|IPR006656|IPR006657|IPR006963|IPR009010|IPR012675|IPR017896|IPR017900|IPR027467 2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Aspartate decarboxylase-like domain|Beta-grasp domain|Formate dehydrogenase, alpha subunit|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site|NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0008863|GO:0009055|GO:0015942|GO:0016020|GO:0016491|GO:0030151|GO:0042773|GO:0051536|GO:0051539|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.30.70.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PF12838|PF13510|PIRSF036643|PS00198|PS00551|PS00641|PTHR11615|PTHR11615:SF112|SM00926|SSF50692|SSF53706|SSF54292|SSF54862|TIGR01591 NIDE_RS08855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000292|IPR023271|IPR024002 Aquaporin-like|Formate/nitrite transporter|Formate/nitrite transporter, conserved site GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF01226|PS01005|PS01006|PTHR30520 NIDE_RS08860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR12778|SSF103473 NIDE_RS08870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025578 Protein of unknown function DUF4359 PF14271 NIDE_RS08875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000788|IPR013344|IPR013678|IPR029072 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase, adenosylcobalamin-dependent|YebC-like GO:0000166|GO:0004748|GO:0006260|GO:0031419|GO:0050897|GO:0055114 G3DSA:3.20.70.20|PF02867|PF08471|PR01183|PTHR11573|PTHR11573:SF18|SSF51998|SSF75625|TIGR02504 NIDE_RS08880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029030 Caspase-like domain G3DSA:3.40.50.1460|PF00656|SSF52129 NIDE_RS08895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025493 Domain of unknown function DUF4384 PF14326|PTHR36194 NIDE_RS08900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008638|IPR011050|IPR012334 Filamentous haemagglutinin, N-terminal|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05860|SM00912|SSF51126|TIGR01901 NIDE_RS08905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011050 Pectin lyase fold/virulence factor SSF51126 NIDE_RS08910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008638|IPR011050|IPR012334 Filamentous haemagglutinin, N-terminal|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05860|SM00912|SSF51126|TIGR01901 NIDE_RS08915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008979|IPR013424 Galactose-binding domain-like|PEP-CTERM protein-sorting domain G3DSA:2.60.120.260|PF07589 NIDE_RS08920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008638|IPR011050|IPR012334 Filamentous haemagglutinin, N-terminal|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05860|SM00912|SSF51126|TIGR01901 NIDE_RS08925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000184|IPR013686 Bacterial surface antigen (D15)|Polypeptide-transport-associated, ShlB-type GO:0019867 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF01103|PF08479|PTHR34597|PTHR34597:SF1 NIDE_RS08930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|PTHR30128|PTHR30128:SF18|SSF103088 NIDE_RS08940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025493 Domain of unknown function DUF4384 PF14326 NIDE_RS08945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000253|IPR001054|IPR008984|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Forkhead-associated (FHA) domain|Nucleotide cyclase|SMAD/FHA domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:2.60.200.20|G3DSA:3.30.70.1230|PF00211|PF00498|SM00044|SSF49879|SSF55073 NIDE_RS08950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001932|IPR015655 PPM-type phosphatase domain|Protein phosphatase 2C family GO:0003824|GO:0004722|GO:0006470 G3DSA:3.60.40.10|PF13672|PTHR13832|PTHR13832:SF278|SM00331|SM00332|SSF81606 NIDE_RS08955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011048|IPR011964|IPR015943 Cytochrome cd1-nitrite reductase-like, haem d1 domain|WD40/YVTN repeat-like-containing domain|YVTN beta-propeller repeat GO:0005515 G3DSA:2.130.10.10|PF02239|PTHR13833|SSF51004|TIGR02276 NIDE_RS08960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006860 FecR protein PF04773 NIDE_RS08965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734|IPR024983 CHAT domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF12770|PF13424|PTHR19959|SM00028|SSF48452 NIDE_RS08970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007655|IPR011990|IPR019734 Protein of unknown function DUF560|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF04575|PF13432|PTHR23083|SM00028|SSF48452 NIDE_RS08975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006860 FecR protein PF04773 NIDE_RS08980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006860 FecR protein PF04773 NIDE_RS09010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010263 Type VI secretion protein, VC_A0114 PF05936|PTHR35566|PTHR35566:SF1|TIGR03353 NIDE_RS09015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017732 Type IV / VI secretion system, DotU PF09850|PTHR38033|PTHR38033:SF1|TIGR03349 NIDE_RS09020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009612|IPR010623|IPR017731|IPR025743|IPR027417 ImcF-related|ImcF-related, N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Type VI secretion system IcmF, C-terminal|Type VI secretion system, IcmF PF06744|PF06761|PF14331|PTHR36153|PTHR36153:SF1|SSF52540|TIGR03348 NIDE_RS09025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017748 Type VI secretion system-associated, BMAA0400 G3DSA:3.40.1730.10|PF09867 NIDE_RS09030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009211 Predicted virulence protein, SciE type PF07024|PIRSF029288|SSF144059 NIDE_RS09035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010657|IPR017740 ImpA, N-terminal|Type VI secretion system-associated, ImpA PF06812|PTHR37951|PTHR37951:SF1|TIGR03363 NIDE_RS09040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PF05591|PIRSF028301|PTHR35850|PTHR35850:SF1|TIGR03358 NIDE_RS09045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PF05943|PTHR35565|PTHR35565:SF3|TIGR03355 NIDE_RS09050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008514 Type VI secretion system effector, Hcp G3DSA:2.30.110.20|PF05638|PTHR36152|SSF141452 NIDE_RS09070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010272 Type VI secretion system, TssF-like PF05947|PIRSF028304|PTHR35370|PTHR35370:SF1|TIGR03359 NIDE_RS09075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010732 Type VI secretion, TssG-like PF06996|PTHR35564|PTHR35564:SF2|TIGR03347 NIDE_RS09080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017729|IPR018368|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|P-loop containing nucleoside triphosphate hydrolase|Type VI secretion system, ATPase ClpV1 GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF07724|PF10431|PR00300|PS00870|PTHR11638|PTHR11638:SF122|SM00382|SM01086|SSF52540|SSF81923|TIGR03345 NIDE_RS09090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006531|IPR006533|IPR010609|IPR017847 Gp5 N-terminal|Gp5, C-terminal|Type VI secretion system, RhsGE-associated Vgr family subset|Type VI secretion system, RhsGE-associated Vgr protein G3DSA:2.40.50.230|G3DSA:3.55.50.10|PF05954|PF06715|PTHR32305|PTHR32305:SF7|SSF69255|SSF69279|SSF69349|TIGR01646|TIGR03361 NIDE_RS09100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011959|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|Conserved hypothetical protein CHP02270 GO:0005488 G3DSA:1.25.10.10|SSF48371|TIGR02270 NIDE_RS09105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018683 Domain of unknown function DUF2169 PF09937 NIDE_RS09120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PTHR30128|SSF103088 NIDE_RS09130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012933 HicA mRNA interferase family GO:0003729 G3DSA:3.30.920.30|PF07927|SSF54786 NIDE_RS09135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR011991|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0015074 G3DSA:1.10.10.10|G3DSA:3.30.420.10|PF00665|PTHR35004|PTHR35004:SF2|SSF53098 NIDE_RS09140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PTHR30050|SM00382|SSF52540 NIDE_RS09145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF143100 NIDE_RS09150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011959|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|Conserved hypothetical protein CHP02270 GO:0005488 G3DSA:1.25.10.10|PF13646|SSF48371|TIGR02270 NIDE_RS09155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007712|IPR009614 Toxin YoeB|Toxin-antitoxin system, RelE/ParE toxin family GO:0004519|GO:0006401 PF06769|PTHR38039|PTHR38039:SF1|SSF143011|TIGR02116|TIGR02385 NIDE_RS09160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|PTHR33713|PTHR33713:SF6|SSF143120|TIGR01552 NIDE_RS09180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005546 Autotransporter beta-domain G3DSA:2.40.128.130|PF03797|SM00869|SSF103515 NIDE_RS09185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006597|IPR011990|IPR029030 Caspase-like domain|Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.1460|PF00656|PF08238|PTHR11102|SM00671|SSF52129|SSF81901 NIDE_RS09190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008312|IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath|Type VI secretion system, VipA, VC_A0107 or Hcp2 PF05591|PF05943|PTHR35565 NIDE_RS09200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13276|PTHR32552|SSF53098 NIDE_RS09210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008517 Protein of unknown function DUF799 PF05643 NIDE_RS09215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005534 Curli production assembly/transport component CsgG GO:0030288 PF03783 NIDE_RS09220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS09225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003018|IPR003594|IPR004358|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase-related protein, C-terminal GO:0005515|GO:0016310|GO:0016772 G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF02518|PF13185|PR00344|PTHR24423|SM00065|SM00387|SSF55781|SSF55874 NIDE_RS09240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000253|IPR008258|IPR008984|IPR023346 Forkhead-associated (FHA) domain|Lysozyme-like domain|SMAD/FHA domain|Transglycosylase SLT domain 1 GO:0005515 G3DSA:1.10.530.10|G3DSA:2.60.200.20|PF00498|PF01464|PTHR21666|PTHR21666:SF219|SM00240|SSF49879|SSF53955 NIDE_RS09250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024952 Lipoprotein LPP20-like PF02169 NIDE_RS09255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025493 Domain of unknown function DUF4384 PF14326 NIDE_RS09260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000184|IPR013686 Bacterial surface antigen (D15)|Polypeptide-transport-associated, ShlB-type GO:0019867 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF01103|PF08479|PTHR34597|PTHR34597:SF1 NIDE_RS09265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008638|IPR011050 Filamentous haemagglutinin, N-terminal|Pectin lyase fold/virulence factor PF05860|SM00912|SSF141072|SSF51126|TIGR01901 NIDE_RS09275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002803 Fructose-1,6-bisphosphatase, class V PD014260|PF01950|PIRSF015647|PTHR38341|PTHR38341:SF1|SSF111249 NIDE_RS09280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 NIDE_RS09285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002912 ACT domain GO:0008152|GO:0016597 G3DSA:3.30.70.260|PF01842|PTHR40099|PTHR40099:SF1|SSF55021 NIDE_RS09290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007730|IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain|Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF03330|PF05036|PTHR34183|PTHR34183:SF1|SSF110997|SSF50685|TIGR00413 NIDE_RS09295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644|IPR002550|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Domain of unknown function DUF21|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|PTHR22777|SM01091|SSF54631|SSF56176 NIDE_RS09300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001357|IPR001679|IPR003583|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR018239|IPR033136 BRCT domain|Helix-hairpin-helix DNA-binding motif, class 1|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, active site|NAD-dependent DNA ligase, adenylation|NAD-dependent DNA ligase, conserved site|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003677|GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:2.40.50.140|G3DSA:3.30.470.30|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03120|PF12826|PF14520|PIRSF001604|PS01055|PS01056|PTHR23389|PTHR23389:SF9|SM00278|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091|TIGR00575 NIDE_RS09310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011704|IPR027417 ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|PTHR13779|PTHR13779:SF30|SSF52540 NIDE_RS09315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018392 LysM domain G3DSA:3.10.350.10|PF01476|SM00257|SSF54106 NIDE_RS09320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005256|IPR005801|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I, PabB-like|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0000162|GO:0004049|GO:0009058|GO:0016833 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|PTHR11236|PTHR11236:SF9|SSF56322|TIGR00564 NIDE_RS09325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0008152 G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|PTHR11922|PTHR11922:SF7|SSF52317|TIGR00566 NIDE_RS09330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000312|IPR005940|IPR017459 Anthranilate phosphoribosyl transferase|Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3 GO:0000162|GO:0004048|GO:0008152|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|MF_00211|PF00591|PF02885|PTHR11922|PTHR11922:SF5|SSF47648|SSF52418|TIGR01245 NIDE_RS09335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001468|IPR011060|IPR013785|IPR013798 Aldolase-type TIM barrel|Indole-3-glycerol phosphate synthase|Indole-3-glycerol phosphate synthase, conserved site|Ribulose-phosphate binding barrel GO:0003824|GO:0004425|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00134_B|PF00218|PS00614|PTHR22854|PTHR22854:SF2|SSF51366 NIDE_RS09345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001240|IPR011060|IPR013785 Aldolase-type TIM barrel|N-(5'phosphoribosyl) anthranilate isomerase (PRAI)|Ribulose-phosphate binding barrel GO:0003824|GO:0004640|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00135|PF00697|PTHR22854|PTHR22854:SF6|SSF51366 NIDE_RS09350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001926|IPR006653|IPR006654|IPR023026 Tryptophan synthase beta chain/beta chain-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme|Tryptophan synthase, beta chain|Tryptophan synthase, beta chain, conserved site GO:0000162|GO:0004834|GO:0006568 G3DSA:3.40.50.1100|MF_00133|PF00291|PIRSF001413|PS00168|PTHR10314|PTHR10314:SF3|SSF53686|TIGR00263 NIDE_RS09355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002028|IPR011060|IPR013785|IPR018204 Aldolase-type TIM barrel|Ribulose-phosphate binding barrel|Tryptophan synthase, alpha chain|Tryptophan synthase, alpha chain, active site GO:0003824|GO:0004834|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00131|PF00290|PS00167|PTHR10314|PTHR10314:SF4|SSF51366|TIGR00262 NIDE_RS09360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003018|IPR029016 GAF domain|GAF domain-like GO:0005515 G3DSA:3.30.450.40|PF13185|SM00065|SSF55781 NIDE_RS09365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014094 Penicillin-binding protein activator LpoB PF13036 NIDE_RS09370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032811 Putative conjugal transfer protein TraF-related G3DSA:2.40.160.60|PF13729|SSF56935 NIDE_RS09375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF111|SM00382|SSF52540 NIDE_RS09380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30489 NIDE_RS09385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002313|IPR004364|IPR004365|IPR012340|IPR018149|IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PR00982|PTHR22594|PTHR22594:SF4|SSF50249|SSF55681|TIGR00499 NIDE_RS09395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003010|IPR004563 Apolipoprotein N-acyltransferase|Carbon-nitrogen hydrolase GO:0006807|GO:0016021|GO:0016410|GO:0016810|GO:0042158 G3DSA:3.60.110.10|MF_01148|PF00795|PTHR38686|SSF56317|TIGR00546 NIDE_RS09405 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 NIDE_RS09415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012349|IPR014419 FMN-binding split barrel|Heme utilization protein with pyridoxamine 5'-phosphate domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF13883|PIRSF004633|PTHR13343|PTHR13343:SF4|SSF50475 NIDE_RS09420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PF04355 NIDE_RS09440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012668 Conserved hypothetical protein CHP02466 G3DSA:2.60.120.620|PF13759|TIGR02466 NIDE_RS09445 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009923|IPR025543 Dodecin|Dodecin-like G3DSA:3.30.1660.10|PF07311|SSF89807 NIDE_RS09450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR001789|IPR011006|IPR013656|IPR013767 CheY-like superfamily|PAC motif|PAS domain|PAS fold|PAS fold-4|Signal transduction response regulator, receiver domain GO:0000160|GO:0006355 G3DSA:3.30.450.20|G3DSA:3.40.50.2300|PF00072|PF00989|PF08448|PF13426|PTHR26402|PTHR26402:SF578|SM00086|SM00091|SM00448|SSF52172|SSF55785|TIGR00229 NIDE_RS09460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR005734|IPR010979|IPR014721|IPR015320|IPR020568 DNA topoisomerase VI, subunit B|DNA topoisomerase VI, subunit B, transducer|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S13-like, H2TH|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003676|GO:0003677|GO:0003918|GO:0005524|GO:0006265 G3DSA:1.10.8.50|G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00322|PD013790|PF02518|PF09239|PIRSF006553|PTHR10871|PTHR10871:SF4|SM00387|SSF46946|SSF54211|SSF55874|TIGR01052 NIDE_RS09465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002815|IPR004085|IPR011991|IPR013049 DNA topoisomerase VI, subunit A|Spo11/DNA topoisomerase VI subunit A|Spo11/DNA topoisomerase VI, subunit A, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0000737|GO:0003677|GO:0003824|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:1.10.10.10|G3DSA:3.40.1360.10|MF_00132|PF04406|PR01550|PR01552|PTHR10848|SSF56726 NIDE_RS09470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011322 Nitrogen regulatory PII-like, alpha/beta SSF54913 NIDE_RS09480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008972 Cupredoxin G3DSA:2.60.40.420 NIDE_RS09500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|SSF54001 NIDE_RS09505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005843|IPR005844|IPR005845|IPR005846|IPR005852|IPR016055|IPR016066 Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucomutase, alpha-D-glucose specific GO:0000287|GO:0004614|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PS00710|PTHR22573|PTHR22573:SF52|SSF53738|SSF55957|TIGR01132 NIDE_RS09510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13192|SSF52833 NIDE_RS09515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF12705|PTHR41262|PTHR41262:SF1|SSF52540 NIDE_RS09520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000212|IPR011335|IPR011604|IPR014016|IPR014017|IPR027417 DNA helicase, UvrD/REP type|Exonuclease, phage-type/RecB, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease type II-like|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0004518|GO:0005524|GO:0016787 G3DSA:1.10.486.10|G3DSA:3.40.50.300|G3DSA:3.90.320.10|PF00580|PF12705|PF13361|PTHR11070|SSF52540|SSF52980 NIDE_RS09525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13414|SM00028|SSF48452 NIDE_RS09530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|PS01311|PTHR30589|PTHR30589:SF0|TIGR00544 NIDE_RS09535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024623 Uncharacterised protein family YtxH PF12732 NIDE_RS09545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002762|IPR012336 Cobalamin (vitamin B12) biosynthesis CbiX|Thioredoxin-like fold GO:0009236|GO:0016852 G3DSA:3.40.30.10|G3DSA:3.40.50.1400|PF01257|PF01903|PTHR33542|PTHR33542:SF2|SSF52833|SSF53800 NIDE_RS09550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021577 Protein of unknown function DUF3209 PF11483 NIDE_RS09555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008333|IPR017938 Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00970|SSF52343|SSF63380 NIDE_RS09560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:3.40.1570.10|SSF144064 NIDE_RS09565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 G3DSA:3.30.2110.10|MF_00787|PF01888|PIRSF026782|PTHR35863|PTHR35863:SF1|SSF111342|TIGR00312 NIDE_RS09570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 G3DSA:3.40.50.10230|PF02570|PTHR32439|PTHR32439:SF1|SSF63965 NIDE_RS09575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000878|IPR006365|IPR012818|IPR014008|IPR014776|IPR014777|IPR029063 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase|Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase|Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit|S-adenosyl-L-methionine-dependent methyltransferase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0008276|GO:0009236 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.150|PF00590|PF01135|PIRSF036428|PTHR14741|PTHR14741:SF34|SSF53335|SSF53790|TIGR02467|TIGR02469 NIDE_RS09580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000878|IPR006364|IPR012382|IPR014777 Precorrin-2 C(20)-methyltransferase|Precorrin-2 C(20)-methyltransferase domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168|GO:0008757|GO:0009236|GO:0030788 G3DSA:3.40.1010.10|PF00590|PIRSF036427|PTHR10882|PTHR10882:SF1|SSF53790|TIGR01467 NIDE_RS09585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002750|IPR021744|IPR021745 CobE/GbiG C-terminal domain|Cobalamin biosynthesis central region|Cobalamin synthesis G, N-terminal GO:0009236 G3DSA:3.30.420.180|PF01890|PF11760|PF11761|PTHR37477|PTHR37477:SF1|SSF159664|SSF159672 NIDE_RS09590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000878|IPR006363|IPR014776|IPR014777 Precorrin-3B C17-methyltransferase domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0009236 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PTHR21091|PTHR21091:SF9|SSF53790|TIGR01466 NIDE_RS09600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000878|IPR003043|IPR006362|IPR014776|IPR014777 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site GO:0008152|GO:0008168|GO:0009236|GO:0046026|GO:0055114 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PS00839|PTHR21091|PTHR21091:SF17|SSF53790|TIGR01465 NIDE_RS09610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000415|IPR012825|IPR029479 5,6-dimethylbenzimidazole synthase BluB|Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR21712|PTHR21712:SF31|SSF55469|TIGR02476 NIDE_RS09615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002586|IPR004484|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyrinic acid a,c-diamide synthase CbiA|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236|GO:0042242 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_00027|PF01656|PF07685|PTHR21343|PTHR21343:SF6|SSF52317|SSF52540|TIGR00379 NIDE_RS09620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 PF03824|PTHR31611 NIDE_RS09625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF36|SSF56935 NIDE_RS09630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13432|PTHR23083|SM00028|SSF48452 NIDE_RS09635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018076 Type II secretion system F domain PF00482|PTHR35007|PTHR35007:SF2 NIDE_RS09645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001482|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PTHR30258|PTHR30258:SF3|SSF52540 NIDE_RS09650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PTHR13696|SSF52540 NIDE_RS09655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018705|IPR028087 Domain of unknown function DUF2134, membrane|Putative Flp pilus-assembly TadG-like, N-terminal PF09977|PF13400 NIDE_RS09660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012495 TadE-like PF07811 NIDE_RS09670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001775|IPR004846|IPR032789 GspD/PilQ family|Pilus formation protein, N-terminal|Type II/III secretion system GO:0009306 PF00263|PF13629|PR00811|PTHR30332|PTHR30332:SF1 NIDE_RS09680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PF01478 NIDE_RS09685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR001932|IPR003594|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PPM-type phosphatase domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003824 G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF07228|PF13581|PTHR24423|SM00331|SM00448|SSF52172|SSF55874 NIDE_RS09690 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002645 STAS domain G3DSA:3.30.750.24|PF13466|SSF52091 NIDE_RS09695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010921|IPR011991 Trp repressor/replication initiator|Winged helix-turn-helix DNA-binding domain GO:0043565 G3DSA:1.10.10.10|PTHR33215|PTHR33215:SF2|SSF48295 NIDE_RS09700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13276|PTHR32552|SSF53098 NIDE_RS09705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13551|SSF46689|SSF53098 NIDE_RS09710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS09715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF16925|PTHR30055|PTHR30055:SF44|SSF46689|SSF48498 NIDE_RS09720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PIRSF000126|PR00081|PS00061|PTHR24322|PTHR24322:SF631|SSF51735 NIDE_RS09730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 NIDE_RS09735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|G3DSA:1.20.5.810|PF02627|PTHR35446|PTHR35446:SF1|SSF69118|TIGR00778 NIDE_RS09740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|SSF51735 NIDE_RS09745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR24559|PTHR24559:SF185|SSF53098 NIDE_RS09750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 NIDE_RS09770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR011991|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0015074 G3DSA:1.10.10.10|G3DSA:3.30.420.10|PF00665|PTHR35004|PTHR35004:SF2|SSF53098 NIDE_RS09775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PTHR30050|SM00382|SSF52540 NIDE_RS09780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF02371|PTHR33055|PTHR33055:SF3 NIDE_RS09785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009057|IPR012337 Homeodomain-like|Ribonuclease H-like domain GO:0003676|GO:0003677 G3DSA:3.30.420.10|PF13551|SSF46689|SSF53098 NIDE_RS09790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR010982|IPR013430 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Toxin-antitoxin system, antidote protein, HigA GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR36924|PTHR36924:SF2|SM00530|SSF47413|TIGR02607 NIDE_RS09795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009241 Toxin HigB-like PF05973 NIDE_RS09800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13744|SM00530|SSF47413 NIDE_RS09830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS09835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000873|IPR001242|IPR006162|IPR009081|IPR010071|IPR020806|IPR020845|IPR029063 AMP-binding, conserved site|AMP-dependent synthetase/ligase|Amino acid adenylation domain|Condensation domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003824|GO:0008152|GO:0031177 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.150|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF13745|PS00012|PS00455|PTHR24095|PTHR24095:SF137|SM00823|SSF47336|SSF52777|SSF53335|SSF56801|TIGR01733 NIDE_RS09840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009081|IPR020806|IPR025110 AMP-binding enzyme C-terminal domain|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain GO:0031177 G3DSA:1.10.1200.10|G3DSA:3.30.300.30|PF00550|PF13193|PTHR24095|PTHR24095:SF137|SM00823|SSF47336|SSF56801 NIDE_RS09845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001227|IPR006162|IPR009081|IPR013968|IPR014030|IPR014031|IPR014043|IPR016035|IPR016036|IPR016039|IPR016040|IPR018201|IPR020801|IPR020806|IPR020841|IPR032821 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Ketoacyl-synthetase, C-terminal extension|Malonyl-CoA ACP transacylase, ACP-binding|NAD(P)-binding domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, acyl transferase domain|Polyketide synthase, beta-ketoacyl synthase domain|Polyketide synthase, ketoreductase domain|Polyketide synthase, phosphopantetheine-binding domain|Thiolase-like GO:0003824|GO:0008152|GO:0016740|GO:0031177 G3DSA:1.10.1200.10|G3DSA:3.30.70.250|G3DSA:3.40.366.10|G3DSA:3.40.47.10|G3DSA:3.40.50.720|PF00109|PF00550|PF00698|PF02801|PF08659|PF16197|PS00012|PS00606|PTHR11712|PTHR11712:SF288|SM00822|SM00823|SM00825|SM00827|SSF47336|SSF51735|SSF52151|SSF53901|SSF55048 NIDE_RS09850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR005898|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|Cyclic peptide transporter|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0015197|GO:0015833|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24220|PTHR24220:SF425|SM00382|SSF52540|SSF90123|TIGR01194 NIDE_RS09855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004637|IPR005814|IPR015421|IPR015422|IPR015424 2,4-diaminobutyrate 4-transaminase|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|PTHR11986|PTHR11986:SF7|SSF53383|TIGR00709 NIDE_RS09860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002692|IPR014395|IPR023343|IPR029055 Nucleophile aminohydrolases, N-terminal|Penicillin acylase|Penicillin amidase type, domain1|Penicillin/cephalosporin acylase GO:0016787|GO:0016811|GO:0017000 G3DSA:1.10.439.10|G3DSA:2.30.120.10|G3DSA:3.60.20.10|PF01804|PIRSF001227|PTHR34218|PTHR34218:SF2|SSF56235 NIDE_RS09865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005153 MbtH-like protein G3DSA:3.90.820.10|PF03621|PTHR38444|PTHR38444:SF1|SM00923|SSF160582 NIDE_RS09870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001031|IPR012223|IPR020802|IPR029058 Alpha/Beta hydrolase fold|Polyketide synthase, thioesterase domain|Thioesterase|Thioesterase type II, NRPS/PKS/S-FAS GO:0009058|GO:0016788 G3DSA:3.40.50.1820|PF00975|PTHR11487|SM00824|SSF53474 NIDE_RS09875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|PTHR10696|PTHR10696:SF27|SSF51197 NIDE_RS09880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000873|IPR001242|IPR006162|IPR009081|IPR010071|IPR020806|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Amino acid adenylation domain|Condensation domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain GO:0003824|GO:0008152|GO:0031177 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF13193|PF13745|PS00012|PS00455|PTHR24095|PTHR24095:SF173|SM00823|SSF47336|SSF52777|SSF56801|TIGR01733 NIDE_RS09885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000873|IPR001242|IPR006162|IPR009081|IPR010060|IPR010071|IPR020806|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Amino acid adenylation domain|Condensation domain|Non-ribosomal peptide synthase|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain GO:0003824|GO:0008152|GO:0031177 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF13193|PF13745|PS00012|PS00455|PTHR24095|PTHR24095:SF173|SM00823|SSF47336|SSF52777|SSF56801|TIGR01720|TIGR01733 NIDE_RS09895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000873|IPR001031|IPR001242|IPR006162|IPR009081|IPR010071|IPR020802|IPR020806|IPR020845|IPR025110|IPR029058 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Alpha/Beta hydrolase fold|Amino acid adenylation domain|Condensation domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain|Polyketide synthase, thioesterase domain|Thioesterase GO:0003824|GO:0008152|GO:0009058|GO:0016788|GO:0031177 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.1820|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF00975|PF13193|PF13745|PS00012|PS00455|PTHR24095|PTHR24095:SF137|SM00823|SM00824|SSF47336|SSF52777|SSF53474|SSF56801|TIGR01733 NIDE_RS09900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF14|SSF82693|SSF82714|SSF82866 NIDE_RS09905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|PTHR30469|PTHR30469:SF11|SSF111369|TIGR01730 NIDE_RS09915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006260 TonB, C-terminal GO:0006810 PF03544|SSF74653|TIGR01352 NIDE_RS09920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF3 NIDE_RS09925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002898|IPR014172 MotA/TolQ/ExbB proton channel|TonB-system energizer ExbB type-2 GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625|TIGR02805 NIDE_RS09930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001375|IPR011042|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Six-bladed beta-propeller, TolB-like GO:0006508|GO:0008236 G3DSA:2.120.10.30|G3DSA:3.40.50.1820|PF00326|PTHR11731|PTHR11731:SF140|SSF53474|SSF82171 NIDE_RS09935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 NIDE_RS09940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|PF07715|PTHR32552|PTHR32552:SF10|SSF56935 NIDE_RS09950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR010105|IPR010917|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|PTHR32552|PTHR32552:SF10|SM00965|SSF56935|TIGR01783 NIDE_RS09955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006860|IPR012373|IPR032508|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal|Protein FecR, C-terminal PF04773|PF16220|PF16344|PIRSF018266|PTHR30273|PTHR30273:SF2 NIDE_RS09960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF30|SSF88659|SSF88946|TIGR02937 NIDE_RS09965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|PTHR33202|SSF46785 NIDE_RS09970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005625|IPR025711 PepSY domain|PepSY-associated TM protein PF03413|PF03929|PTHR34219 NIDE_RS09975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07660|PF07715|PTHR32552|SM00965|SSF56935 NIDE_RS09980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006860|IPR012373|IPR032508|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal|Protein FecR, C-terminal PF04773|PF16220|PF16344|PIRSF018266|PTHR30273|PTHR30273:SF2 NIDE_RS09985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 NIDE_RS09990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR010105|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07660|PF07715|PTHR32552|PTHR32552:SF10|SM00965|SSF56935|TIGR01783 NIDE_RS09995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006860|IPR012373|IPR032508|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal|Protein FecR, C-terminal PF04773|PF16220|PF16344|PIRSF018266|PTHR30273|PTHR30273:SF2 NIDE_RS10000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF30|SSF88659|SSF88946|TIGR02937 NIDE_RS10005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|SSF74653|TIGR01352 NIDE_RS10025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal|tRNA-binding arm GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|MF_00176|PF00587|PF02403|PIRSF001529|PR00981|PTHR11778|SSF46589|SSF55681|TIGR00414 NIDE_RS10030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006638|IPR007197|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PTHR11228|PTHR11228:SF26|SM00729|SSF102114 NIDE_RS10035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PTHR12231|SM00450|SSF52821 NIDE_RS10040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007160 Domain of unknown function DUF362 PF04015 NIDE_RS10045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|PTHR35089|SM00935|SSF111384 NIDE_RS10055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604 NIDE_RS10060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold GO:0005488 G3DSA:1.25.10.10|SSF48371 NIDE_RS10070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PS00194|PTHR10438|PTHR10438:SF281|SSF52833 NIDE_RS10075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001282|IPR016040|IPR019796|IPR022674|IPR022675 Glucose-6-phosphate dehydrogenase|Glucose-6-phosphate dehydrogenase, C-terminal|Glucose-6-phosphate dehydrogenase, NAD-binding|Glucose-6-phosphate dehydrogenase, active site|NAD(P)-binding domain GO:0004345|GO:0006006|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00966|PF00479|PF02781|PIRSF000110|PR00079|PS00069|PTHR23429|PTHR23429:SF0|SSF51735|SSF55347|TIGR00871 NIDE_RS10080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002204|IPR004849|IPR006114|IPR006115|IPR006183|IPR008927|IPR013328|IPR016040 3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, C-terminal|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, YqeC-type|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0006098|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00393|PF03446|PR00076|PS00895|PTHR11811|PTHR11811:SF28|SM01350|SSF48179|SSF51735|TIGR00872 NIDE_RS10085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:3.30.460.10|SSF81301 NIDE_RS10095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001597|IPR015421|IPR015422|IPR015424|IPR023603 Aromatic amino acid beta-eliminating lyase/threonine aldolase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Threonine aldolase GO:0003824|GO:0006520|GO:0016829 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PIRSF017617|PTHR10289|PTHR10289:SF5|SSF53383 NIDE_RS10100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004667|IPR011701|IPR020846 ADP/ATP carrier protein|Major facilitator superfamily|Major facilitator superfamily domain GO:0005471|GO:0005524|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR31187|SSF103473 NIDE_RS10105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|GPR domain|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0050661|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PTHR11063|PTHR11063:SF8|SSF53720 NIDE_RS10115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|SSF53448 NIDE_RS10120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024983|IPR029058 Alpha/Beta hydrolase fold|CHAT domain G3DSA:3.40.50.1820|PF12770|SSF53474 NIDE_RS10125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 NIDE_RS10130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005519|IPR006423|IPR023214 5-nucleotidase lipoprotein e(P4)|Acid phosphatase, class B-like|HAD-like domain GO:0009279 G3DSA:3.40.50.1000|PF03767|PIRSF019271|PTHR31284|PTHR31284:SF10|SSF56784 NIDE_RS10140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002078|IPR003593|IPR009057|IPR025662|IPR025943|IPR027417 AAA+ ATPase domain|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2 GO:0003677|GO:0005524|GO:0006355|GO:0008134 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PS00675|PS00676|PTHR32071|SM00382|SSF46689|SSF52540 NIDE_RS10150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007067 Tail sheath protein PF04984|PTHR35861|PTHR35861:SF1 NIDE_RS10155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010667|IPR011747 Bacteriophage T4, Gp19, tail tube|Conserved hypothetical protein CHP02241 GO:0005198 PF06841|PTHR38009|PTHR38009:SF1|TIGR02241 NIDE_RS10170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013783|IPR025351 Immunoglobulin-like fold|Protein of unknown function DUF4255 G3DSA:2.60.40.10|PF14065 NIDE_RS10175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|PTHR23073|PTHR23073:SF24|SM00382|SSF52540 NIDE_RS10215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006531 Gp5 N-terminal G3DSA:2.40.50.230|SSF69255 NIDE_RS10225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007048 GpW/Gp25/anti-adapter protein IraD G3DSA:3.10.450.40|PF04965|PTHR35862|PTHR35862:SF2|SSF160719 NIDE_RS10230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006949|IPR011749 Baseplate protein J-like|Conserved hypothetical protein CHP02243 PF04865|TIGR02243 NIDE_RS10235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011749 Conserved hypothetical protein CHP02243 TIGR02243 NIDE_RS10240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011050|IPR012334 Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|SSF51126 NIDE_RS10255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025295 Domain of unknown function DUF4157 PF13699 NIDE_RS10265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007197|IPR013785 Aldolase-type TIM barrel|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13394|PTHR11228|PTHR11228:SF7|SSF102114 NIDE_RS10280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12801|PS00198|PTHR30176|SSF54862 NIDE_RS10285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002763 Protein of unknown function DUF72 G3DSA:3.20.20.410|PF01904|PTHR30348|SSF117396 NIDE_RS10290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003141|IPR004013|IPR004805|IPR011708|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:3.20.20.140|PF02811|PF07733|PF14579|PTHR32294|PTHR32294:SF0|SM00481|SSF89550|TIGR00594 NIDE_RS10295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001126|IPR017961 DNA polymerase, Y-family, little finger domain|UmuC domain GO:0003684|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|PF00817|PTHR11076|SSF100879|SSF56672 NIDE_RS10300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006197|IPR006200|IPR010982|IPR015927|IPR019759|IPR028360 Lambda repressor-like, DNA-binding domain|Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Transcription regulator LexA GO:0003677|GO:0004252|GO:0006355|GO:0009432|GO:0045892 G3DSA:1.10.260.40|G3DSA:2.10.109.10|PF00717|PR00726|PTHR33516|PTHR33516:SF2|SSF47413|SSF51306|TIGR00498 NIDE_RS10315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006696 Protein of unknown function DUF423 PF04241|PTHR10584|PTHR10584:SF191 NIDE_RS10330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PTHR22604|SSF51735|SSF55347 NIDE_RS10335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011008|IPR019887 Dimeric alpha-beta barrel|Transcription regulator AsnC/Lrp, ligand binding domain G3DSA:3.30.70.920|PF01037|SSF54909 NIDE_RS10345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000523|IPR001208|IPR003593|IPR004482|IPR014721|IPR020568|IPR025158|IPR027417 AAA+ ATPase domain|MCM domain|Magnesium chelatase ChlI domain|Mg chelatase-related protein|Mg chelatase-related protein, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003677|GO:0005524|GO:0006260 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF01078|PF13335|PF13541|PR01657|PTHR32039|PTHR32039:SF7|SM00382|SSF52540|SSF54211|TIGR00368 NIDE_RS10360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 NIDE_RS10380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PS00675|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS10385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF141371 NIDE_RS10390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS10415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009061|IPR010093|IPR011991 Putative DNA-binding domain|SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|SSF46955|TIGR01764 NIDE_RS10425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS10430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13174|PF13181|PF13432|SM00028|SSF48452 NIDE_RS10435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF13188|PR00344|PTHR24423|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS10440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS10445 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PIRSF002889|PTHR30435|PTHR30435:SF12|TIGR01396 NIDE_RS10450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001444|IPR006299|IPR010930 Flagellar basal body rod protein, N-terminal|Flagellar basal-body rod protein FlgC|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PTHR30435|PTHR30435:SF2|TIGR01395 NIDE_RS10455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MF_00724|PF02049|PR01006|PTHR34653|TIGR00205 NIDE_RS10460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000067|IPR006182|IPR013556 Flagellar M-ring C-terminal|Flagellar M-ring protein FliF|Secretory protein YscJ/FliF GO:0003774|GO:0009431|GO:0071973 PF01514|PF08345|PIRSF004862|PR01009|PTHR30046|PTHR30046:SF0|TIGR00206 NIDE_RS10465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000090|IPR011002|IPR023087|IPR028263|IPR032779 Flagellar motor switch protein FliG|Flagellar motor switch protein FliG, C-terminal|Flagellar motor switch protein FliG, N-terminal domain|Flagellar motor switch protein FliG, alpha-helical|Flagellar motor switch protein FliG, middle domain GO:0003774|GO:0006935|GO:0009288|GO:0071973 G3DSA:1.10.220.30|PF01706|PF14841|PF14842|PIRSF003161|PR00954|PTHR30534|PTHR30534:SF0|SSF48029|TIGR00207 NIDE_RS10470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006|IPR018035 CheY-like superfamily|Flagellar assembly protein FliH/Type III secretion system HrpE|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PF02108|PTHR32071|SM00448|SSF52172 NIDE_RS10475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000194|IPR003593|IPR004100|IPR005714|IPR020003|IPR027417|IPR032463 AAA+ ATPase domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPase, type III secretion system, FliI|ATPase, type III secretion system, FliI/YscN|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009058|GO:0015992|GO:0016887|GO:0030254|GO:0030257|GO:0044780|GO:0046034 G3DSA:3.40.50.300|PF00006|PF02874|PS00152|PTHR15184|PTHR15184:SF9|SM00382|SSF52540|TIGR01026 NIDE_RS10480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PF02050 NIDE_RS10485 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:1.25.60.10|SSF158791 NIDE_RS10490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120 NIDE_RS10495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005648 Flagellar hook capping protein PF03963|PTHR30435 NIDE_RS10500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001444|IPR010930|IPR011491|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook protein FlgE GO:0071973 PF00460|PF06429|PF07559|PTHR30435|PTHR30435:SF1|SSF117143|TIGR03506 NIDE_RS10510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PF03748|PTHR35091|PTHR35091:SF2 NIDE_RS10515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001543|IPR001689|IPR028976 CheC-like domain|Flagellar motor switch protein FliM|Surface presentation of antigen (SpoA) GO:0003774|GO:0009425|GO:0071973 G3DSA:2.30.330.10|PF01052|PF02154|PIRSF002888|PR00955|PTHR30034|PTHR30034:SF0|SSF101801|SSF103039|TIGR01397 NIDE_RS10520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001172|IPR001543|IPR012826 Flagellar motor switch FliN|Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009288|GO:0009425|GO:0016020|GO:0071973 G3DSA:2.30.330.10|PF01052|PR00956|PTHR30034|PTHR30034:SF1|SSF101801|TIGR02480 NIDE_RS10525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PF04347 NIDE_RS10530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005837|IPR005838 Flagellar transport protein FliP|Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PF00813|PR00951|PR01302|PS01060|PS01061|PTHR30587|PTHR30587:SF0|TIGR01103 NIDE_RS10535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002191|IPR006305 Bacterial export protein family 3|Flagellar biosynthesis protein FliQ GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF01313|PIRSF004669|PR00952|PTHR34040|PTHR34040:SF2|TIGR01402 NIDE_RS10540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002010|IPR006303 Flagellar biosynthesis protein FliR|Type III secretion system inner membrane R protein GO:0006605|GO:0016020|GO:0016021|GO:0044780 PF01311|PR00953|PTHR30065|PTHR30065:SF1|TIGR01400 NIDE_RS10545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006135|IPR006136|IPR029025 Flagellar biosynthetic protein FlhB|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0015031|GO:0016020|GO:0016021|GO:0044780 G3DSA:3.40.1690.10|PF01312|PR00950|PTHR30531|PTHR30531:SF0|SSF160544|TIGR00328 NIDE_RS10550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001712|IPR006301|IPR025505 FHIPEP conserved site|Flagellar biosynthesis protein FlhA|Type III secretion system FHIPEP GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF00771|PIRSF005419|PR00949|PS00994|PTHR30161|PTHR30161:SF1|TIGR01398 NIDE_RS10555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000897|IPR003593|IPR020006|IPR027417 AAA+ ATPase domain|Flagellar biosynthesis protein FlhF|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain GO:0003924|GO:0005525|GO:0006614|GO:0044781 G3DSA:1.20.120.140|G3DSA:3.40.50.300|PF00448|PTHR11564|PTHR11564:SF3|SM00382|SM00962|SSF52540|TIGR03499 NIDE_RS10560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002586|IPR025501|IPR027417 ATP binding protein MinD|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PIRSF003092|PTHR13696|PTHR13696:SF3|SSF52540 NIDE_RS10565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR011991|IPR012845|IPR013324|IPR013325|IPR014284|IPR016263 RNA polymerase sigma factor, FliA/WhiG|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|RNA polymerase sporulation-specific sigma factor|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0003899|GO:0006351|GO:0006352|GO:0006355|GO:0016987|GO:0030435 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF04539|PF04542|PF04545|PIRSF000770|PR00046|PS00715|PS00716|PTHR30385|PTHR30385:SF7|SSF88659|SSF88946|TIGR02479|TIGR02937 NIDE_RS10570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 NIDE_RS10575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001444|IPR010930|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain GO:0071973 PF00460|PF06429|PTHR30435|PTHR30435:SF18|SSF117143|TIGR03506 NIDE_RS10580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001444|IPR010930|IPR012834|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgG|Flagellar basal-body/hook protein, C-terminal domain GO:0009426|GO:0071973 PF00460|PF06429|PS00588|PTHR30435|PTHR30435:SF19|SSF117143|TIGR02488|TIGR03506 NIDE_RS10585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013974|IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal|SAF domain PF13144|PTHR36307|SM00858|TIGR03170 NIDE_RS10590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MF_00415|PF02107|PR01008|PTHR34933 NIDE_RS10595 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MF_00416|PF02119|PR01010|PTHR30381|PTHR30381:SF0 NIDE_RS10600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019301 Flagellar protein FlgJ, N-terminal PF10135 NIDE_RS10605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007412|IPR031316 Anti-sigma-28 factor FlgM, C-terminal|Anti-sigma-28 factor, FlgM GO:0045892 PF04316|SSF101498|TIGR03824 NIDE_RS10610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007809 FlgN-like protein GO:0005515|GO:0044780 G3DSA:1.20.58.300|PF05130|SSF140566 NIDE_RS10615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001444|IPR002371|IPR010930 Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780|GO:0071973 PF00460|PF06429|PR01005|PTHR30033|PTHR30033:SF1|SSF64518|TIGR02492 NIDE_RS10620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001029|IPR013384 Flagellar hook-associated protein 3|Flagellin, D0/D1 domain GO:0005198|GO:0009424|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|PTHR30244|PTHR30244:SF5|SSF64518|TIGR02550 NIDE_RS10625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 MF_00167|PD009007|PF02599|PTHR34984|PTHR34984:SF1|SSF117130|TIGR00202 NIDE_RS10630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003775|IPR024046 Flagellar assembly factor FliW|Flagellar assembly factor FliW domain GO:0044780 G3DSA:2.30.290.10|MF_01185|PF02623|PTHR39190|SSF141457 NIDE_RS10635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006|IPR013656 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01627|PF02518|PF08448|PF13188|PR00344|PTHR24423|SM00091|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55785|SSF55874 NIDE_RS10640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003607|IPR006674|IPR006675|IPR021812 HD domain|HD/PDEase domain|HDIG domain|Protein of unknown function DUF3391 G3DSA:1.10.3210.10|PF11871|PF13487|SM00471|SSF109604|TIGR00277 NIDE_RS10645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875|IPR009926|IPR012349 FMN-binding split barrel|PilZ domain|Type III secretion system flagellar brake protein YcgR, N-terminal GO:0010181|GO:0016491|GO:0035438|GO:0055114 G3DSA:2.30.110.10|G3DSA:2.40.10.220|PF07238|PF12945|SSF141371 NIDE_RS10650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF3|SSF53383 NIDE_RS10655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF370|SSF51735 NIDE_RS10660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001174|IPR006204|IPR013750|IPR014606|IPR014721|IPR020568 D,D-heptose 7-phosphate kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Galactokinase/homoserine kinase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0008152|GO:0016301 G3DSA:3.30.230.10|G3DSA:3.30.70.890|PF00288|PF08544|PIRSF036406|PR00960|PTHR32463|SSF54211|SSF55060 NIDE_RS10670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|SSF53383 NIDE_RS10675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006158|IPR006638|IPR007197|IPR020612|IPR023404|IPR023970 Cobalamin (vitamin B12)-binding domain|Elongator protein 3/MiaB/NifB|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.80.30.20|PF02310|PF04055|PS01278|PTHR11918|PTHR11918:SF64|SM00729|SSF102114 NIDE_RS10680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|PTHR18968:SF13|SSF52467|SSF52518 NIDE_RS10685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006158|IPR006638|IPR007197|IPR023404|IPR023970 Cobalamin (vitamin B12)-binding domain|Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.40.50.280|G3DSA:3.80.30.20|PF02310|PF04055|PTHR11918|PTHR11918:SF64|SM00729|SSF102114|SSF52242 NIDE_RS10705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|SSF53756 NIDE_RS10710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024542 Domain of unknown function DUF3880 PF12996|PF13524 NIDE_RS10715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF11|SSF53756 NIDE_RS10725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001029|IPR001492 Flagellin|Flagellin, D0/D1 domain GO:0005198|GO:0009420|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|PR00207|PTHR30244|PTHR30244:SF1|SSF64518 NIDE_RS10730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005186 FlaG protein G3DSA:3.30.160.170|PF03646|PTHR37166|PTHR37166:SF1|SSF160214 NIDE_RS10735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003481|IPR010809|IPR010810 Flagellar hook-associated 2, C-terminal|Flagellar hook-associated protein 2, N-terminal|Flagellin hook, IN motif GO:0006928|GO:0007155|GO:0009288|GO:0009424|GO:0044781 PF02465|PF07195|PF07196|PTHR30288|PTHR30288:SF0 NIDE_RS10740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003713 Flagellar protein FliS GO:0044780 G3DSA:1.20.120.340|PF02561|PIRSF039090|PTHR34773|SSF101116|TIGR00208 NIDE_RS10750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238 NIDE_RS10755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PTHR13696|PTHR13696:SF3|SSF52540 NIDE_RS10760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009061|IPR010093|IPR011991 Putative DNA-binding domain|SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|SSF46955|TIGR01764 NIDE_RS10765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000780|IPR022641|IPR022642|IPR026024|IPR029063 Chemotaxis protein methyltransferase CheR|Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PIRSF000410|PR00996|PTHR24422|SM00138|SSF47757|SSF53335 NIDE_RS10770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS10775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 G3DSA:1.10.287.500|PF04344|SSF75708 NIDE_RS10780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207 CheW-like domain|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|PF01584|PF01627|PF02518|PF02895|PR00344|PTHR22617|PTHR22617:SF6|SM00073|SM00260|SM00387|SM01231|SSF160246|SSF47226|SSF47384|SSF50341|SSF55874 NIDE_RS10785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002545|IPR011006|IPR024181 CheW-like domain|CheY-like superfamily|Chemotaxis response regulator CheV|Signal transduction response regulator, receiver domain GO:0000160|GO:0004871|GO:0006935|GO:0007165 G3DSA:3.40.50.2300|PF00072|PF01584|PIRSF002867|PTHR22617|PTHR22617:SF37|SM00260|SM00448|SSF50341|SSF52172 NIDE_RS10790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|PTHR24421|PTHR24421:SF16|SM00448|SSF52172|SSF52738 NIDE_RS10795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003660|IPR004089|IPR021796 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Protein of unknown function DUF3365 GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF11845|PTHR32089|SM00283|SM00304|SSF58104 NIDE_RS10800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.30.30.40|G3DSA:2.40.50.180|PF01584|PTHR22617|PTHR22617:SF33|SM00260|SSF50341 NIDE_RS10810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002898|IPR022522 Flagellar motor stator, MotA|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30433|PTHR30433:SF3 NIDE_RS10815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006665|IPR025713 Motility protein B, N-terminal domain|OmpA-like domain G3DSA:3.30.1330.60|PF00691|PF13677|PTHR30329|PTHR30329:SF4|SSF103088 NIDE_RS10820 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002645 STAS domain G3DSA:3.30.750.24|PF13466|SSF52091 NIDE_RS10825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PTHR32089|PTHR32089:SF1|SM00283|SSF58104 NIDE_RS10830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS10835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207 CheW-like domain|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|PF01584|PF01627|PF02518|PF02895|PR00344|PTHR22617|PTHR22617:SF20|SM00073|SM00260|SM00387|SM01231|SSF160246|SSF47226|SSF47384|SSF50341|SSF55874 NIDE_RS10840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.30.30.40|G3DSA:2.40.50.180|PF01584|PTHR22617|SM00260|SSF50341 NIDE_RS10850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007352 Protein of unknown function DUF420 PF04238 NIDE_RS10855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000780|IPR022641|IPR022642|IPR026024|IPR029063 Chemotaxis protein methyltransferase CheR|Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PIRSF000410|PR00996|PTHR24422|PTHR24422:SF13|SM00138|SSF47757|SSF53335 NIDE_RS10860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005659|IPR011324 Chemoreceptor glutamine deamidase CheD|Cytotoxic necrotizing factor-like, catalytic GO:0006935|GO:0050568 MF_01440|PF03975|PTHR35147|PTHR35147:SF2|SSF64438 NIDE_RS10865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|PTHR24421|PTHR24421:SF21|SM00448|SSF52172|SSF52738 NIDE_RS10870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002645|IPR003658 Anti-sigma factor antagonist|STAS domain GO:0006355|GO:0045152 G3DSA:3.30.750.24|PF13466|PTHR33495|PTHR33495:SF3|SSF52091|TIGR00377 NIDE_RS10875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002645|IPR003658 Anti-sigma factor antagonist|STAS domain GO:0006355|GO:0045152 G3DSA:3.30.750.24|PF01740|PTHR33495|SSF52091|TIGR00377 NIDE_RS10880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR001932|IPR011006 CheY-like superfamily|PPM-type phosphatase domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003824 G3DSA:3.40.50.2300|PF00072|PF07228|PTHR26402|SM00331|SM00448|SSF52172|SSF81606 NIDE_RS10885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 G3DSA:1.20.120.160|PF01627|SSF47226 NIDE_RS10890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR003594|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PF13581|PTHR26402|PTHR26402:SF117|SM00448|SSF52172|SSF55874 NIDE_RS10895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PTHR34504|PTHR34504:SF1|SSF143100 NIDE_RS10900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012933 HicA mRNA interferase family GO:0003729 G3DSA:3.30.920.30|PF07927|PTHR34873|PTHR34873:SF1|SSF54786 NIDE_RS10910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003331|IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like|UDP-N-acetylglucosamine 2-epimerase domain GO:0008761 G3DSA:3.40.50.2000|PF02350|PTHR18964|PTHR18964:SF70|SSF53756|TIGR00236 NIDE_RS10920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system PF04365 NIDE_RS10925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025528 BrnA antitoxin of type II toxin-antitoxin system PF14384 NIDE_RS10935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009614 Toxin YoeB GO:0004519|GO:0006401 PF06769|PTHR38039|PTHR38039:SF1|SSF143011|TIGR02116 NIDE_RS10940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|PTHR33713|PTHR33713:SF6|SSF143120|TIGR01552 NIDE_RS10945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012480|IPR031680 Heparin-sulfate lyase, N-terminal|Heparinase II/III-like PF07940|PF16889|PTHR39210 NIDE_RS10970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006342|IPR029063 Methyltransferase FkbM|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF05050|SSF53335|TIGR01444 NIDE_RS10975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 NIDE_RS10980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|PTHR12526|SSF53756 NIDE_RS10990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF7|SSF53756 NIDE_RS10995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001451|IPR005881|IPR011004 Hexapeptide repeat|Serine O-acetyltransferase|Trimeric LpxA-like GO:0005737|GO:0006535|GO:0009001 G3DSA:2.160.10.10|PF00132|PIRSF000441|PTHR23416|PTHR23416:SF55|SSF51161 NIDE_RS11000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008397|IPR008929|IPR012480|IPR031680 Alginate lyase domain|Chondroitin AC/alginate lyase|Heparin-sulfate lyase, N-terminal|Heparinase II/III-like GO:0016829|GO:0042597 G3DSA:1.50.10.110|PF07940|PF16889|PTHR39210|SSF48230 NIDE_RS11005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain PF00534|PF13579|PTHR12526|PTHR12526:SF320|SSF53756 NIDE_RS11010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013426|IPR014263|IPR019127|IPR026392|IPR026491 Exosortase D, VPLPA-CTERM-specific|Exosortase EpsH-related|Exosortase, EpsH|Exosortase/Archaeosortase domain|Methanolan biosynthesis EpsI PF09721|PF11984|TIGR02602|TIGR02914|TIGR04152|TIGR04178 NIDE_RS11020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13174|PF13428|PF13432|PF14559|PTHR23083|SM00028|SSF48452 NIDE_RS11025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531|PTHR33619 NIDE_RS11030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:2.40.160.60 NIDE_RS11035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PTHR32309|PTHR32309:SF13 NIDE_RS11040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PTHR32309|PTHR32309:SF13|SSF52540 NIDE_RS11045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000683|IPR011032|IPR013149|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain|Oxidoreductase, N-terminal|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF01408|PTHR22604|SM00829|SSF50129|SSF51735|SSF55347 NIDE_RS11050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13401|PR00364|PTHR35894|PTHR35894:SF1|SM00382|SSF52540 NIDE_RS11055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF50|SM00448|SSF46894|SSF52172 NIDE_RS11060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007899 CHAD domain PF05235 NIDE_RS11065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|SSF53254 NIDE_RS11070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003695|IPR006674|IPR030673 HD domain|Ppx/GppA phosphatase|Pyrophosphatase, GppA/Ppx-type G3DSA:1.10.3210.10|G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF01966|PF02541|PIRSF001267|PTHR30005|PTHR30005:SF0|SSF109604|SSF53067 NIDE_RS11075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR026022|IPR028366 PhoU domain|Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 G3DSA:1.20.58.220|PF01895|PIRSF003107|PTHR10010|PTHR10010:SF14|SSF109755|TIGR02135 NIDE_RS11080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR005670|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate transport system permease protein 1 GO:0005315|GO:0005524|GO:0016020|GO:0016887|GO:0035435 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF585|SM00382|SSF52540|TIGR00972 NIDE_RS11085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000515|IPR005672 ABC transporter type 1, transmembrane domain MetI-like|Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0006810|GO:0016020|GO:0035435 G3DSA:1.10.3720.10|PF00528|PTHR30425|PTHR30425:SF7|SSF161098|TIGR00974 NIDE_RS11090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000515|IPR001680|IPR015943|IPR017986 ABC transporter type 1, transmembrane domain MetI-like|WD40 repeat|WD40-repeat-containing domain|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0006810|GO:0016020 G3DSA:1.10.3720.10|G3DSA:2.130.10.10|PF00528|PTHR30425|PTHR30425:SF3|SM00320|SSF161098|SSF50978 NIDE_RS11095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011862|IPR024370 PBP domain|Phosphate binding protein GO:0006810 G3DSA:3.40.190.10|PF12849|PTHR30570|PTHR30570:SF5|SSF53850|TIGR02136 NIDE_RS11105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004658 Outer membrane lipoprotein Slp GO:0019867 PF03843 NIDE_RS11120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|PTHR30570|PTHR30570:SF5|SSF53850 NIDE_RS11125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF531|SM00448|SM00862|SSF46894|SSF52172 NIDE_RS11135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR020948 Phosphate-starvation-induced PsiE-like PF06146 NIDE_RS11140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|PTHR30570|PTHR30570:SF5|SSF53850 NIDE_RS11160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010870|IPR023614 Phosphate-selective porin O/P|Porin domain G3DSA:2.40.160.10|PF07396|SSF56935 NIDE_RS11165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00486|PTHR26402|PTHR26402:SF578|SM00862|SSF46894|SSF52172 NIDE_RS11170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS11175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PTHR30128|PTHR30128:SF18|SSF103088 NIDE_RS11190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001891|IPR002912|IPR012301|IPR012302|IPR016040 ACT domain|Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic oxidoreductase|NAD(P)-binding domain GO:0004470|GO:0004471|GO:0006108|GO:0008152|GO:0016597|GO:0051287|GO:0055114 G3DSA:3.30.70.260|G3DSA:3.40.50.10380|G3DSA:3.40.50.720|PF00390|PF03949|PF13291|PIRSF000106|PTHR23406|PTHR23406:SF23|SM00919|SM01274|SSF51735|SSF53223|SSF55021 NIDE_RS11195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009978 Putative Na+/H+ antiporter PF07399 NIDE_RS11210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002121|IPR002562|IPR006292|IPR010997|IPR012337 3'-5' exonuclease domain|HRDC domain|HRDC-like|Ribonuclease D|Ribonuclease H-like domain GO:0000166|GO:0003676|GO:0003824|GO:0005622|GO:0006139|GO:0008033|GO:0008408|GO:0033890|GO:0044237 G3DSA:1.10.150.80|G3DSA:3.30.420.10|MF_01899|PF00570|PF01612|PTHR12124|SM00341|SM00474|SSF47819|SSF53098|TIGR01388 NIDE_RS11220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006659|IPR006660|IPR012336 Arsenate reductase|Arsenate reductase-like|Thioredoxin-like fold GO:0008794|GO:0055114 G3DSA:3.40.30.10|PF03960|PTHR30041|SSF52833|TIGR00014 NIDE_RS11235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002020|IPR011278|IPR016142|IPR016143|IPR019810|IPR024176 2-methylcitrate synthase/citrate synthase type I|Citrate synthase|Citrate synthase active site|Citrate synthase, bacterial-type|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0005737|GO:0006099|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PS00480|PTHR11739|PTHR11739:SF4|SSF48256|TIGR01800 NIDE_RS11240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF118|SSF49764 NIDE_RS11245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000362|IPR005677|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate hydratase, class II|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004333|GO:0006099|GO:0006106|GO:0016829|GO:0045239 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00743|PF00206|PF10415|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF1|SSF48557 NIDE_RS11250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016040|IPR023753 FAD/NAD(P)-binding domain|NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.50.50.60|PTHR11938|PTHR11938:SF4|SSF51971 NIDE_RS11255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, all-beta|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0006741|GO:0008152|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|PTHR20275|SSF111331 NIDE_RS11260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923 NIDE_RS11265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000905|IPR017860|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|Peptidase M22, conserved site|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|PS01016|PTHR11735|PTHR11735:SF6|SSF53067|TIGR00329|TIGR03723 NIDE_RS11270 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006073|IPR016496|IPR025121|IPR027417|IPR032305 GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PR00326|PTHR10229|PTHR10229:SF0|SSF52540|TIGR03156 NIDE_RS11275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000445|IPR003265|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PIRSF001435|PTHR10359|PTHR10359:SF18|SM00478|SSF48150|TIGR01083 NIDE_RS11280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005229|IPR013527|IPR013551 Conserved hypothetical protein CHP00255|Domain of unknown function DUF1732|YicC-like, N-terminal PF03755|PF08340|PTHR30636|TIGR00255 NIDE_RS11285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008145|IPR017665|IPR020590|IPR027417 Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0004385|GO:0006163 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00625|PS00856|PTHR23117|PTHR23117:SF13|SM00072|SSF52540|TIGR03263 NIDE_RS11290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003716|IPR006110|IPR012293 DNA-directed RNA polymerase, omega subunit|RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 G3DSA:3.90.940.10|MF_00366|PF01192|SM01409|SSF63562|TIGR00690 NIDE_RS11295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003382|IPR005252|IPR007085 Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavoprotein GO:0003824|GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|PTHR14359|PTHR14359:SF20|SSF102645|SSF52507|TIGR00521 NIDE_RS11300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF14559|PTHR23083|SM00028|SSF48452 NIDE_RS11305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001874|IPR018509 Dehydroquinase, class II|Dehydroquinase, class II, conserved site GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|PS01029|PTHR21272|SSF52304|TIGR01088 NIDE_RS11310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|PTHR30053|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 NIDE_RS11315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000089|IPR001249|IPR001882|IPR011053 Acetyl-CoA biotin carboxyl carrier|Biotin-binding site|Biotin/lipoyl attachment|Single hybrid motif GO:0003989|GO:0006633|GO:0009317 G3DSA:2.40.50.100|PF00364|PR01071|PS00188|PTHR23151|PTHR23151:SF64|SSF51230|TIGR00531 NIDE_RS11320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004549|IPR005479|IPR005481|IPR005482|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Acetyl-CoA carboxylase, biotin carboxylase|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0005524|GO:0016874 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00866|PS00867|PTHR18866|SM00878|SSF51246|SSF52440|SSF56059|TIGR00514 NIDE_RS11325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003733|IPR013785|IPR022998 Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|MF_00097|PF02581|PTHR20857|PTHR20857:SF15|SSF51391|TIGR00693 NIDE_RS11330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004472|IPR027417 Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0004141|GO:0005524|GO:0009102 G3DSA:3.40.50.300|MF_00336|PF13500|PIRSF006755|PTHR21343|PTHR21343:SF0|SSF52540|TIGR00347 NIDE_RS11335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF328|SSF51735 NIDE_RS11345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002872|IPR015590|IPR016161|IPR016162|IPR016163|IPR025703|IPR029041|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase|Bifunctional protein PutA|FAD-linked oxidoreductase-like|Proline dehydrogenase domain GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0008152|GO:0010133|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.20.20.220|G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PF01619|PIRSF000197|PS00687|PTHR11699|PTHR11699:SF18|SSF51730|SSF53720 NIDE_RS11355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF109604 NIDE_RS11360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005804|IPR015876 Fatty acid desaturase domain|Fatty acid desaturase, type 1, core GO:0006629|GO:0016717|GO:0055114 PF00487|PR00075|PTHR11351 NIDE_RS11365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000808|IPR019591|IPR027417 Mrp, conserved site|Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|MF_02040|PF10609|PS01215|PTHR23264|SSF52540 NIDE_RS11370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PTHR21496|SSF50022 NIDE_RS11395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006230 Protein MutL PF13941 NIDE_RS11400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:2.40.50.100 NIDE_RS11425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002737 MEMO1 family PF01875|PTHR11060|PTHR11060:SF0|TIGR04336 NIDE_RS11445 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PR00153|PS00170|PTHR11071|PTHR11071:SF78|SSF50891 NIDE_RS11450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR30619|PTHR30619:SF2|SSF56281 NIDE_RS11455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018739 Domain of unknown function DUF2281 PF10047 NIDE_RS11460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003477|IPR011067 Plasmid maintenance toxin/Cell growth inhibitor|mRNA interferase PemK-like protein GO:0003677 G3DSA:2.30.30.110|PF02452|SSF50118 NIDE_RS11470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002052|IPR003356|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|PTHR30195|PTHR30195:SF10|SSF53335 NIDE_RS11480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009241 Toxin HigB-like PF05973 NIDE_RS11485 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF12844|SM00530|SSF47413 NIDE_RS11490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006935|IPR007409|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0005524|GO:0006304|GO:0016787 G3DSA:3.40.50.300|PF04313|PF04851|PTHR30195|PTHR30195:SF13|SM00487|SSF52540 NIDE_RS11495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001405|IPR025657 RadC protein|RadC-like JAB domain G3DSA:3.40.140.10|PF04002|PTHR30471|PTHR30471:SF3|SSF102712|TIGR00608 NIDE_RS11500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003477|IPR011067 Plasmid maintenance toxin/Cell growth inhibitor|mRNA interferase PemK-like protein GO:0003677 G3DSA:2.30.30.110|PF02452|PIRSF033490|PTHR33988|PTHR33988:SF2|SSF50118 NIDE_RS11505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007159 SpoVT-AbrB domain GO:0003677 G3DSA:2.10.260.10|SM00966|SSF89447 NIDE_RS11510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 NIDE_RS11515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003477|IPR011067 Plasmid maintenance toxin/Cell growth inhibitor|mRNA interferase PemK-like protein GO:0003677 G3DSA:2.30.30.110|PF02452|PIRSF033490|PTHR33988|PTHR33988:SF2|SSF50118 NIDE_RS11520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010985 Ribbon-helix-helix GO:0006355 SSF47598 NIDE_RS11525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11662|SSF103473 NIDE_RS11530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007844|IPR025263|IPR032712 AsmA|AsmA-like, C-terminal|Domain of unknown function DUF3971 PF05170|PF13116|PF13502|PTHR30441|PTHR30441:SF2 NIDE_RS11535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000994|IPR001131|IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain|Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PS00491|PTHR10804|PTHR10804:SF110|SSF55920 NIDE_RS11540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001041|IPR004489|IPR006058|IPR009051|IPR012675|IPR017896|IPR017900|IPR025192 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Beta-grasp domain|Succinate dehydogenase/fumarate reductase N-terminal|Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF13085|PF13183|PS00197|PS00198|PTHR11921|SSF46548|SSF54292|TIGR00384 NIDE_RS11545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002804|IPR023572 Archease|Archease domain G3DSA:3.55.10.10|PD012969|PF01951|PTHR12682|PTHR12682:SF10|SSF69819 NIDE_RS11550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PF01139|PS01288|PTHR11118|PTHR11118:SF1|SSF103365 NIDE_RS11555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS11560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029151 Periplasmic sensor domain-like G3DSA:3.30.450.20|SSF103190 NIDE_RS11565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR000160|IPR001633|IPR001789|IPR011006|IPR013655|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain|PAS fold-3|Signal transduction response regulator, receiver domain GO:0000160|GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00990|PF08447|PTHR10799|PTHR10799:SF774|SM00052|SM00267|SM00448|SSF141868|SSF52172|SSF55073|SSF55785|TIGR00229|TIGR00254 NIDE_RS11575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004099|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PTHR22912|PTHR22912:SF93|SSF51905|SSF55424 NIDE_RS11580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013976 Metal-dependent hydrolase HDOD G3DSA:1.10.3150.10|PF08668|PTHR33525|PTHR33525:SF3|SSF109604 NIDE_RS11585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:1.20.120.20 NIDE_RS11590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004017 Cysteine-rich domain PF02754|PTHR32479|PTHR32479:SF12 NIDE_RS11595 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 NIDE_RS11600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021796 Protein of unknown function DUF3365 PF11845 NIDE_RS11605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 NIDE_RS11615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SSF55008 NIDE_RS11620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001287|IPR008972|IPR011707 Cupredoxin|Multicopper oxidase, type 3|Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 G3DSA:2.60.40.420|PF07732|PR00695|PTHR11709|PTHR11709:SF84|SSF49503 NIDE_RS11625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PTHR24567|PTHR24567:SF32|SM00100|SM00419|SSF46785|SSF51206 NIDE_RS11630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005474|IPR005475|IPR009014|IPR020826|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00802|PTHR11624|PTHR11624:SF2|SM00861|SSF52518|SSF52922 NIDE_RS11640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000836|IPR023050|IPR029057 Bifunctional protein PyrR|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|MF_01219|PF00156|PTHR11608|SSF53271 NIDE_RS11645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002082|IPR006130|IPR006131|IPR006132 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|PTHR11405|PTHR11405:SF16|SSF53671|TIGR00670 NIDE_RS11650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002195|IPR004722|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Dihydroorotase|Dihydroorotase, conserved site|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0004151|GO:0006221|GO:0016787|GO:0016810|GO:0016812|GO:0046872 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_00220_B|PF01979|PS00482|PS00483|PTHR11647|PTHR11647:SF70|SSF51338|SSF51556|TIGR00857 NIDE_RS11655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025423 Domain of unknown function DUF4149 PF13664 NIDE_RS11660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002474|IPR006274|IPR017926|IPR029062 Carbamoyl-phosphate synthase, small subunit|Carbamoyl-phosphate synthase, small subunit N-terminal domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00097|PR00099|PTHR11405|SM01097|SSF52021|SSF52317|TIGR01368 NIDE_RS11665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002142|IPR004635|IPR029045 ClpP/crotonase-like domain|Peptidase S49|Peptidase S49, SppA GO:0006508|GO:0008233 G3DSA:3.90.226.10|PF01343|PTHR33209|SSF52096|TIGR00706 NIDE_RS11670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR22726 NIDE_RS11675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Methylglyoxal synthase-like domain|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|MF_01210_A|MF_01210_B|PF02142|PF02786|PF02787|PR00098|PS00867|PTHR11405|PTHR11405:SF47|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 NIDE_RS11680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001437|IPR006359|IPR018151|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|PS00830|PTHR30437|SSF46557|SSF54534|TIGR01462 NIDE_RS11685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002747|IPR023227|IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal|S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal|SAM-dependent chlorinase/fluorinase G3DSA:2.40.30.90|PF01887|PIRSF006779|PTHR35092|PTHR35092:SF1|SSF101852|SSF102522 NIDE_RS11690 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF4|SSF111369|TIGR01730 NIDE_RS11700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005814|IPR005815|IPR015421|IPR015422|IPR015424 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004015|GO:0008483|GO:0009102|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00834|PF00202|PS00600|PTHR11986|PTHR11986:SF8|SSF53383|TIGR00508 NIDE_RS11705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR009000|IPR009022|IPR013842|IPR027417 Elongation factor 4|Elongation factor G, III-V domain|GTP-binding protein LepA, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|PTHR23115|PTHR23115:SF175|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01393 NIDE_RS11710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000223|IPR015927|IPR019756|IPR019757|IPR019758|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site|Peptidase S26A, signal peptidase I, lysine active site|Peptidase S26A, signal peptidase I, serine active site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|PF00717|PR00727|PS00501|PS00760|PS00761|PTHR12383|PTHR12383:SF27|SSF51306|TIGR02227 NIDE_RS11715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011611|IPR011913|IPR029056 Carbohydrate kinase PfkB|RfaE bifunctional protein, domain I|Ribokinase-like GO:0005975|GO:0016773|GO:0016779 G3DSA:3.40.1190.20|PF00294|PTHR10584|PTHR10584:SF159|SSF53613|TIGR02198 NIDE_RS11720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003329|IPR004528|IPR029044 3-deoxy-D-manno-octulosonate cytidylyltransferase|Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0005737|GO:0008690 G3DSA:3.90.550.10|MF_00057|PF02348|PTHR21485|PTHR21485:SF4|SSF53448|TIGR00466 NIDE_RS11725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|PTHR11550|SSF52317|SSF52540|TIGR00337 NIDE_RS11730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006218|IPR006269|IPR013785 3-deoxy-8-phosphooctulonate synthase|Aldolase-type TIM barrel|DAHP synthetase I/KDSA GO:0003824|GO:0005737|GO:0008152|GO:0008676|GO:0009058 G3DSA:3.20.20.70|MF_00056|PF00793|PTHR21057|PTHR21057:SF2|SSF51569|TIGR01362 NIDE_RS11735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644|IPR001347|IPR004800 CBS domain|Phosphosugar isomerase, KdsD/KpsF-type|Sugar isomerase (SIS) GO:0005975|GO:0016853|GO:0030246 G3DSA:3.10.580.10|G3DSA:3.40.50.10490|PF00571|PF01380|PIRSF004692|PTHR38418|PTHR38418:SF1|SM00116|SSF53697|TIGR00393 NIDE_RS11740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 PF01066|PIRSF000847|PS00379|PTHR14269|TIGR00560 NIDE_RS11745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MF_01043|PF02660|PTHR30309|PTHR30309:SF0|SM01207|TIGR00023 NIDE_RS11750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 G3DSA:3.30.70.1450|PF02080|SSF116726 NIDE_RS11760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|SM00228|SSF50156|SSF50494|TIGR02037 NIDE_RS11765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000640|IPR004161|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PF03764|PF14492|PTHR23115|PTHR23115:SF98|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231 NIDE_RS11770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001405|IPR010994|IPR020891|IPR025657 RadC protein|RadC-like JAB domain|RuvA domain 2-like|Uncharacterised protein family UPF0758, conserved site G3DSA:1.10.150.20|G3DSA:3.40.140.10|PF04002|PS01302|PTHR30471|PTHR30471:SF3|SSF47781|TIGR00608 NIDE_RS11775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002052|IPR004398|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0031167|GO:0032259 G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|PTHR18895|PTHR18895:SF60|SSF53335|TIGR00095 NIDE_RS11780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001980|IPR004821|IPR014729 Coenzyme A biosynthesis protein|Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PF01467|PR01020|PTHR21342|PTHR21342:SF1|SSF52374|TIGR00125|TIGR01510 NIDE_RS11785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PR00753|PS00105|PTHR11751|PTHR11751:SF306|SSF53383 NIDE_RS11800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|PTHR17490|SSF55821|TIGR00057 NIDE_RS11805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000115|IPR011054|IPR013815|IPR013816|IPR016185|IPR020560|IPR020561|IPR020562 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, N-terminal|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|PTHR10520|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 NIDE_RS11810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002695|IPR011607|IPR016193|IPR024051 AICAR transformylase domain|AICARFT/IMPCHase bienzyme|Cytidine deaminase-like|Methylglyoxal synthase-like domain GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.140.20|G3DSA:3.40.50.1380|MF_00139|PF01808|PF02142|PIRSF000414|PTHR11692|PTHR11692:SF2|SM00798|SM00851|SSF52335|SSF53927|TIGR00355 NIDE_RS11815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PTHR30128|SSF103088 NIDE_RS11825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010266 NnrS PF05940 NIDE_RS11835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 NIDE_RS11845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003141|IPR004013|IPR004365|IPR004805|IPR011708|IPR012340|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:1.10.150.280|G3DSA:2.40.50.140|G3DSA:3.20.20.140|PF01336|PF02811|PF07733|PF14579|PTHR32294|PTHR32294:SF0|SM00481|SSF89550|TIGR00594 NIDE_RS11850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001095|IPR029045 Acetyl-CoA carboxylase, alpha subunit|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_00823|PF03255|PR01069|PTHR22855|PTHR22855:SF42|SSF52096|TIGR00513 NIDE_RS11855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 PF07642|SSF56935 NIDE_RS11870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001650|IPR007502|IPR010225|IPR011545|IPR013689|IPR014001|IPR027417 ATP-dependent RNA helicase HrpB, C-terminal|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase-associated domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase, ATP-dependent DEAH box, HrpB-type GO:0003676|GO:0004386|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF04408|PF08482|PIRSF005496|PTHR18934|SM00487|SM00490|SM00847|SSF52540|TIGR01970 NIDE_RS11875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002912 ACT domain GO:0008152|GO:0016597 G3DSA:3.30.70.260|PF01842|PF13740|PTHR34875|PTHR34875:SF3|SSF55021 NIDE_RS11880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|PTHR10458|SSF56420|TIGR00079 NIDE_RS11885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|PTHR11102|SM00671|SSF81901 NIDE_RS11890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PTHR10742|PTHR10742:SF287|SSF51905 NIDE_RS11905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PTHR21600|PTHR21600:SF2|SM00363|SSF55120|SSF55174|TIGR00093 NIDE_RS11920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|PTHR10992|SSF53474 NIDE_RS11930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021796 Protein of unknown function DUF3365 PF11845 NIDE_RS11935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|SSF56281 NIDE_RS11940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021747 Protein of unknown function DUF3313 PF11769 NIDE_RS11945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011394|IPR025984 MazG-like domain|NTP Pyrophosphohydrolase MazG-related, RS21-C6 G3DSA:1.10.287.1080|PF12643|PIRSF029826|PTHR14552|SSF101386 NIDE_RS11955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002686|IPR011991 Transposase IS200-like|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.10|G3DSA:3.30.70.1290|PF01797|PF13384|PTHR34322|PTHR34322:SF1|SM01321|SSF143422 NIDE_RS11960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322|PIRSF000267|PTHR30365|PTHR30365:SF6|TIGR00203 NIDE_RS11965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654|PIRSF006446|PTHR30365|PTHR30365:SF0 NIDE_RS11970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066|PS00379|PTHR15362|PTHR15362:SF2 NIDE_RS11980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006073|IPR016496|IPR025121|IPR027417|IPR032305 GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PIRSF006809|PR00326|PTHR10229|PTHR10229:SF0|SSF52540|TIGR03156 NIDE_RS11985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007711 Toxin HigB-1 PF05015|SSF143011 NIDE_RS11990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 NIDE_RS11995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010652 Protein of unknown function DUF1232 PF06803 NIDE_RS12010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000340|IPR016130|IPR029021 Dual specificity phosphatase, catalytic domain|Protein-tyrosine phosphatase, active site|Protein-tyrosine phosphatase-like GO:0004725|GO:0006470|GO:0008138|GO:0016311|GO:0016791 G3DSA:3.90.190.10|PF00782|PS00383|PTHR23339|PTHR23339:SF64|SSF52799 NIDE_RS12015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001650|IPR006935|IPR013670|IPR014001|IPR027417 EcoEI R protein C-terminal domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003824|GO:0005524|GO:0006304|GO:0016787 G3DSA:3.40.50.300|PF00271|PF04851|PF08463|PTHR30195|PTHR30195:SF3|SM00487|SSF52540 NIDE_RS12025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011204 Virulence protein RhuM-like PF13310|PIRSF015268|PTHR35810|PTHR35810:SF1 NIDE_RS12035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002052|IPR003356|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|PTHR30195|PTHR30195:SF2|SSF53335 NIDE_RS12040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 NIDE_RS12045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009241 Toxin HigB-like PF05973 NIDE_RS12050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003018|IPR003594|IPR003661|IPR004358|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF02518|PF13185|PR00344|PTHR24423|SM00065|SM00387|SSF47384|SSF55781|SSF55874 NIDE_RS12055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009003 Peptidase S1, PA clan G3DSA:2.40.10.10|SSF50494|SSF69318 NIDE_RS12060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|SSF53335 NIDE_RS12065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 NIDE_RS12080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011991|IPR013196|IPR026881 Helix-turn-helix, type 11|WYL domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF08279|PF13280|PTHR34580|PTHR34580:SF1 NIDE_RS12085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012675 Beta-grasp domain G3DSA:3.10.20.30 NIDE_RS12090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011031 Multihaem cytochrome G3DSA:3.90.10.10|SSF48695 NIDE_RS12095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004017|IPR004113|IPR006094|IPR009051|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Cysteine-rich domain|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02754|PF02913|PF13183|PS00198|PTHR11748|PTHR11748:SF35|SSF46548|SSF55103|SSF56176 NIDE_RS12100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006139|IPR006140|IPR016040|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00670|PS00671|PTHR10996|SSF51735|SSF52283 NIDE_RS12105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13174|PF13181|PF13432|PF14559|PTHR23083|SM00028|SSF48452 NIDE_RS12110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 NIDE_RS12115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005495 Permease LptG/LptF-related GO:0016021 PF03739|PTHR33529|PTHR33529:SF2 NIDE_RS12120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005495|IPR030923 LPS export ABC transporter permease LptG|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|PTHR33529|TIGR04408 NIDE_RS12125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|PTHR11712|SM00825|SSF53901|TIGR03150 NIDE_RS12130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003231|IPR009081 Acyl carrier protein (ACP)|Phosphopantetheine binding ACP domain GO:0006633 G3DSA:1.10.1200.10|MF_01217|PD000887|PF00550|PTHR20863|PTHR20863:SF5|SSF47336 NIDE_RS12135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001451|IPR007691|IPR011004|IPR018357|IPR020573 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016410|GO:0016740|GO:0016747 G3DSA:2.160.10.10|MF_00523|PF00132|PF04613|PS00101|PTHR22572|PTHR22572:SF117|SSF51161|TIGR01853 NIDE_RS12150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 G3DSA:1.20.120.160|SSF47226 NIDE_RS12160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PF01584|SSF50341 NIDE_RS12165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PF01584|SSF50341 NIDE_RS12170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207|IPR011006 CheW-like domain|CheY-like superfamily|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF01584|PF01627|PF02518|PF02895|PR00344|PTHR22617|PTHR22617:SF6|SM00073|SM00260|SM00387|SM00448|SM01231|SSF47226|SSF47384|SSF50341|SSF52172|SSF55874 NIDE_RS12180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.40.50.180|PF01584|PTHR22617|SM00260|SSF50341 NIDE_RS12185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF404|SM00448|SSF52172 NIDE_RS12190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021796 Protein of unknown function DUF3365 PF11845 NIDE_RS12195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002586|IPR004459|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyric acid synthase CobQ|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_00028|PF01656|PF07685|PTHR21343|PTHR21343:SF1|SSF52317|SSF52540|TIGR00313 NIDE_RS12200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002808 Adenosylcobinamide amidohydrolase, CbiZ PF01955|PTHR35336|PTHR35336:SF2 NIDE_RS12205 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004838|IPR004839|IPR005860|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|L-threonine-O-3-phosphate decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0009236|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF3|SSF53383|TIGR01140 NIDE_RS12210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 MF_00024|PF03186|PTHR34308|PTHR34308:SF1|TIGR00380 NIDE_RS12215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 MF_00719|PF02654|PTHR34148|PTHR34148:SF1|TIGR00317 NIDE_RS12220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003200|IPR017846|IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009163|GO:0009236 G3DSA:1.10.1610.10|G3DSA:3.40.50.10210|MF_00230|PF02277|PTHR21712|PTHR21712:SF4|SSF52733|TIGR03160 NIDE_RS12225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003203|IPR027417 Cobinamide kinase/cobinamide phosphate guanyltransferase|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0009236|GO:0043752|GO:0051188 G3DSA:3.40.50.300|PF02283|PIRSF006135|PTHR34848|SSF52540 NIDE_RS12230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016030|IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type|Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like G3DSA:1.20.1200.10|PD007457|PF01923|PTHR12213|PTHR12213:SF0|SSF89028|TIGR00636 NIDE_RS12235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000415|IPR012825|IPR029479 5,6-dimethylbenzimidazole synthase BluB|Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR21712|PTHR21712:SF31|SSF55469|TIGR02476 NIDE_RS12240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003724|IPR027417 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0008817|GO:0009236 G3DSA:3.40.50.300|PF02572|PIRSF015617|PTHR30069|SSF52540|TIGR00708 NIDE_RS12245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002586|IPR004484|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyrinic acid a,c-diamide synthase CbiA|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236|GO:0042242 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_00027|PF01656|PF07685|PTHR21343|PTHR21343:SF6|SSF52317|SSF52540|TIGR00379 NIDE_RS12250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|SSF56935 NIDE_RS12255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF73|SM00382|SSF52540 NIDE_RS12260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, permease protein GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|PTHR30472|PTHR30472:SF3|SSF81345 NIDE_RS12265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|PTHR30535|SSF53807 NIDE_RS12270 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006603 PQ-loop repeat PF04193 NIDE_RS12275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001383|IPR026569 Ribosomal protein L28|Ribosomal protein L28/L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.1160.10|MF_00373|PF00830|PTHR13528|SSF143800|TIGR00009 NIDE_RS12285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531|PTHR33619 NIDE_RS12290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531|PTHR33619 NIDE_RS12300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003869|IPR016040 NAD(P)-binding domain|Polysaccharide biosynthesis protein, CapD-like domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF02719|PF13727|PTHR10366|PTHR10366:SF256|SSF51735 NIDE_RS12305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003848 Domain of unknown function DUF218 PF02698|SSF142764 NIDE_RS12310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF9|SSF53383 NIDE_RS12315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|PTHR30466|SM00903|SSF50475 NIDE_RS12320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 NIDE_RS12325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13480|SSF55729 NIDE_RS12330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001451|IPR011004|IPR016185|IPR020019 Hexapeptide repeat|Pre-ATP-grasp domain|Sialic acid O-acyltransferase NeuD-like|Trimeric LpxA-like G3DSA:2.160.10.10|G3DSA:3.40.50.20|PF00132|PTHR23416|SSF51161|TIGR03570 NIDE_RS12335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 NIDE_RS12340 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 NIDE_RS12345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000873|IPR010071|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Amino acid adenylation domain GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|SSF56801|TIGR01733 NIDE_RS12350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PTHR30011|PTHR30011:SF1|SSF51679 NIDE_RS12355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003362 Bacterial sugar transferase PF02397|PTHR30576|PTHR30576:SF8 NIDE_RS12360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|SSF52266 NIDE_RS12370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13579|PTHR12526|SSF53756 NIDE_RS12380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001962|IPR006426|IPR014729|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|PTHR11772|PTHR11772:SF10|SSF52402|SSF56235|TIGR01536 NIDE_RS12385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 NIDE_RS12390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007016 O-antigen ligase-related PF04932 NIDE_RS12395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13439|PF13692|PTHR12526|SSF53756 NIDE_RS12415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757|PTHR23028 NIDE_RS12420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ PF03023|PR01806|PTHR11206|PTHR11206:SF90 NIDE_RS12425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003856|IPR005702|IPR025669|IPR027417|IPR032807 AAA domain|Exopolysaccharide synthesis protein|Lipopolysaccharide biosynthesis|P-loop containing nucleoside triphosphate hydrolase|Tyrosine kinase, G-rich domain GO:0009103|GO:0016020|GO:0045226 G3DSA:3.40.50.300|PF02706|PF13614|PF13807|PTHR32309|PTHR32309:SF13|SSF52540|TIGR01007 NIDE_RS12430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018759 Putative beta-barrel porin 2 PF10082 NIDE_RS12435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 NIDE_RS12440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006645 NusG, N-terminal GO:0006355 G3DSA:3.30.70.940|PF02357|PTHR30265|PTHR30265:SF3|SSF82679 NIDE_RS12450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30026|SSF56954 NIDE_RS12455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|SSF111369|TIGR01730 NIDE_RS12460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:2.120.10.60|SSF82171 NIDE_RS12465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:2.40.50.100|PF13533|PF16576|PTHR30469|SSF111369 NIDE_RS12470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000185|IPR011115|IPR011130|IPR020937|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SecA DEAD-like, N-terminal|SecA conserved site|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF07517|PR00906|PS01312|PTHR30612|SM00957|SM00958|SSF52540|SSF81767 NIDE_RS12475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001193|IPR032317 Membrane-bound transcription factor site-2 protease|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0004222|GO:0006508|GO:0016020 G3DSA:2.40.50.100|PF16576|PTHR13325|PTHR13325:SF4|SSF111369 NIDE_RS12480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003018|IPR029016|IPR032317 GAF domain|GAF domain-like|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0005515 G3DSA:2.40.50.100|G3DSA:3.30.450.40|PF01590|PF16576|PTHR32347|PTHR32347:SF12|SM00065|SSF111369|SSF55781 NIDE_RS12490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001412|IPR002305|IPR002307|IPR002942|IPR014729|IPR024088|IPR024108 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type|Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437 G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02007|PF00579|PF01479|PR01040|PS00178|PTHR11766|PTHR11766:SF1|SM00363|SSF52374|SSF55174|TIGR00234 NIDE_RS12500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004099|IPR006258|IPR012999|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF125|SSF51905|SSF55424|TIGR01350 NIDE_RS12505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002930|IPR003016|IPR011053|IPR017453 2-oxo acid dehydrogenase, lipoyl-binding site|Glycine cleavage system H-protein|Glycine cleavage system H-protein, subgroup|Single hybrid motif GO:0005960|GO:0019464 G3DSA:2.40.50.100|MF_00272|PF01597|PS00189|PTHR11715|SSF51230|TIGR00527 NIDE_RS12510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|SSF48452 NIDE_RS12515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001564|IPR023005 Nucleoside diphosphate kinase|Nucleoside diphosphate kinase, active site GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 G3DSA:3.30.70.141|MF_00451|PF00334|PR01243|PS00469|PTHR11349|SM00562|SSF54919 NIDE_RS12520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000649|IPR005251|IPR011559|IPR027363 Initiation factor 2B alpha/beta/delta|Initiation factor 2B-related|Methylthioribose-1-phosphate isomerase|Methylthioribose-1-phosphate isomerase-like, N-terminal domain GO:0044237|GO:0044249 G3DSA:1.20.120.420|G3DSA:3.40.50.10470|MF_01678|PF01008|PTHR10233|PTHR10233:SF6|SSF100950|TIGR00512|TIGR00524 NIDE_RS12525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF16|SSF53383 NIDE_RS12535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279|IPR004477|IPR004797|IPR025405 ComEC/Rec2-related protein|Competence protein ComEC/Rec2|Domain of unknown function DUF4131|Metallo-beta-lactamase GO:0016021|GO:0030420 G3DSA:3.60.15.10|PF00753|PF03772|PF13567|PTHR30619|PTHR30619:SF2|SM00849|SSF56281|TIGR00360|TIGR00361 NIDE_RS12540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR006352|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|MF_01554_B|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF15|SSF53738|SSF55957|TIGR01455 NIDE_RS12545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000489|IPR006390|IPR011005 Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding domain GO:0004156|GO:0009396|GO:0042558|GO:0044237 G3DSA:3.20.20.20|PF00809|PS00792|PS00793|PTHR20941|PTHR20941:SF1|SSF51717|TIGR01496 NIDE_RS12550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|PTHR23076|SM00382|SSF140990|SSF52540|TIGR01241 NIDE_RS12555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000836|IPR005904|IPR029057 Hypoxanthine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004422|GO:0005737|GO:0006166|GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR22573|PTHR22573:SF56|SSF53271|TIGR01203 NIDE_RS12570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002606|IPR014729|IPR015864|IPR015865|IPR023465|IPR023468 FAD synthetase|Riboflavin kinase|Riboflavin kinase domain|Riboflavin kinase domain, bacterial/eukaryotic|Riboflavin kinase, bacterial|Rossmann-like alpha/beta/alpha sandwich fold GO:0003919|GO:0008531|GO:0009231 G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PIRSF004491|PTHR22749|PTHR22749:SF0|SM00904|SSF52374|SSF82114|TIGR00083 NIDE_RS12575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001731|IPR013785|IPR030656 Aldolase-type TIM barrel|Delta-aminolevulinic acid dehydratase|Delta-aminolevulinic acid dehydratase, active site GO:0003824|GO:0004655|GO:0033014|GO:0046872 G3DSA:3.20.20.70|PF00490|PIRSF001415|PR00144|PS00169|PTHR11458|SM01004|SSF51569 NIDE_RS12580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS12585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000878|IPR003043|IPR003754|IPR006366|IPR014776|IPR014777 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0004852|GO:0006779|GO:0008152|GO:0008168|GO:0033014|GO:0055114 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.10090|PF00590|PF02602|PS00839|PS00840|PTHR21091|PTHR21091:SF16|SSF53790|SSF69618|TIGR01469 NIDE_RS12590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000860|IPR022417|IPR022418|IPR022419 Porphobilinogen deaminase|Porphobilinogen deaminase, C-terminal|Porphobilinogen deaminase, N-terminal|Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 G3DSA:3.30.160.40|G3DSA:3.40.190.10|MF_00260|PF01379|PF03900|PIRSF001438|PR00151|PS00533|PTHR11557|PTHR11557:SF0|SSF53850|SSF54782|TIGR00212 NIDE_RS12595 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000343|IPR006151|IPR015895|IPR015896|IPR016040|IPR018214 Glutamyl-tRNA reductase, conserved site|NAD(P)-binding domain|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 G3DSA:3.40.50.720|MF_00087|PF00745|PF01488|PF05201|PIRSF000445|PS00747|PTHR13812|PTHR13812:SF18|SSF51735|SSF69075|SSF69742|TIGR01035 NIDE_RS12600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PF01578|PTHR30071 NIDE_RS12605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000878|IPR008189|IPR014776|IPR014777 Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PIRSF005917|PTHR21091|PTHR21091:SF18|SSF53790 NIDE_RS12610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001455 TusA-like domain G3DSA:3.30.110.40|PF01206|PTHR33279|SSF64307 NIDE_RS12625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007457 Fe(II) trafficking protein YggX GO:0005506 G3DSA:1.10.3880.10|PD029191|PF04362|SSF111148 NIDE_RS12630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003729 Bifunctional nuclease domain GO:0004518 PF02577|PTHR15160|SSF103256 NIDE_RS12635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003729 Bifunctional nuclease domain GO:0004518 PF02577|PTHR15160|SSF103256 NIDE_RS12640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005822|IPR005823|IPR023564 Ribosomal protein L13|Ribosomal protein L13 domain|Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|PTHR11545|SSF52161|TIGR01066 NIDE_RS12645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|PTHR21569|SSF54211 NIDE_RS12650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000534|IPR000706|IPR012280|IPR016040 N-acetyl-gamma-glutamyl-phosphate reductase, type 1|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0006526|GO:0008652|GO:0016620|GO:0046983|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00150|PF01118|PF02774|PTHR32338|PTHR32338:SF8|SM00859|SSF51735|SSF55347|TIGR01850 NIDE_RS12655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002813|IPR016117 ArgJ-like domain|Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 G3DSA:3.60.70.12|MF_01106|PD004193|PF01960|PTHR23100|PTHR23100:SF0|SSF56266|TIGR00120 NIDE_RS12660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:1.10.287.610|G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|PTHR12534|SSF52313|TIGR01011 NIDE_RS12665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001816|IPR009060|IPR014039|IPR018101 Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.286.20|G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01127|PTHR11741|SSF46934|SSF54713|TIGR00116 NIDE_RS12670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001048|IPR011817|IPR015963 Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|PTHR21499|PTHR21499:SF20|SSF53633|TIGR02075 NIDE_RS12675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002661|IPR023584 Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|MF_00040|PF01765|PTHR20982|SSF55194|TIGR00496 NIDE_RS12680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR020622|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|PTHR30511|PTHR30511:SF0|SM01005|SSF50621|SSF51419|TIGR00492 NIDE_RS12685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025515 Protein of unknown function DUF4403 PF14356 NIDE_RS12690 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002767|IPR029756 MTH1187/YkoF-like|Thiamine-binding protein G3DSA:3.30.70.930|PF01910|PTHR33777|PTHR33777:SF1|SSF89957|TIGR00106 NIDE_RS12695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006367|IPR016040 NAD(P)-binding domain|Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 G3DSA:3.30.160.110|G3DSA:3.40.50.720|PF13241|PTHR35330|SSF51735|SSF75615|TIGR01470 NIDE_RS12705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003615|IPR029471 HNH endonuclease 5|HNH nuclease PF14279|PTHR33877|PTHR33877:SF2|SM00507 NIDE_RS12710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PTHR21496|SSF50022 NIDE_RS12720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013024|IPR017939 Butirosin biosynthesis, BtrG-like|Gamma-glutamylcyclotransferase GO:0003839|GO:0006750 G3DSA:3.10.490.10|PF13772|PTHR12935|SSF110857 NIDE_RS12725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF01257|PTHR11780|PTHR11780:SF12|SSF52833 NIDE_RS12730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001453|IPR008284|IPR012245 MoaB/Mog domain|Molybdenum cofactor biosynthesis protein MoaB|Molybdenum cofactor biosynthesis, conserved site GO:0006777 G3DSA:3.40.980.10|PF00994|PIRSF006443|PS01078|PTHR10192|PTHR10192:SF18|SM00852|SSF53218|TIGR00177 NIDE_RS12735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|PTHR11911:SF68|SM00116|SSF54631 NIDE_RS12740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF605|SM00829|SSF50129|SSF51735 NIDE_RS12745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 G3DSA:3.10.310.10|PF02567|PIRSF016184|PTHR13774|PTHR13774:SF15|SSF54506|TIGR00654 NIDE_RS12760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006158|IPR006638|IPR007197|IPR023404|IPR023970 Cobalamin (vitamin B12)-binding domain|Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.40.50.280|G3DSA:3.80.30.20|PF02310|PF04055|PTHR11918|PTHR11918:SF64|SM00729|SSF102114|SSF52242 NIDE_RS12765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006158|IPR006638|IPR007197|IPR023404|IPR023970 Cobalamin (vitamin B12)-binding domain|Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.40.50.280|G3DSA:3.80.30.20|PF02310|PF04055|PTHR11918|PTHR11918:SF64|SM00729|SSF102114|SSF52242 NIDE_RS12770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40 NIDE_RS12780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF13289 NIDE_RS12810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001077|IPR011991|IPR016461|IPR029063|IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain|O-methyltransferase COMT-type|O-methyltransferase, family 2|S-adenosyl-L-methionine-dependent methyltransferase|Winged helix-turn-helix DNA-binding domain GO:0008168|GO:0008171 G3DSA:1.10.10.10|G3DSA:3.40.50.150|PF00891|PF16864|PIRSF005739|PTHR11746|PTHR11746:SF63|SSF46785|SSF53335 NIDE_RS12815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF75011 NIDE_RS12820 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|PTHR33930|PTHR33930:SF5|SSF69118|TIGR00778 NIDE_RS12825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|PTHR10108:SF889|SSF53335 NIDE_RS12830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003313|IPR009057|IPR018060|IPR020449|IPR032783 AraC-type arabinose-binding/dimerisation domain|AraC-type transcription regulator, ligand-binding domain|DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|PF12852|PR00032|PTHR11019|PTHR11019:SF77|SM00342|SSF46689 NIDE_RS12835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009057|IPR009594|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC, N-terminal GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF06719|PF12833|PTHR11019|PTHR11019:SF81|SM00342|SSF46689 NIDE_RS12840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 NIDE_RS12845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011004 Trimeric LpxA-like G3DSA:2.160.10.10|PTHR13061|PTHR13061:SF8|SSF51161 NIDE_RS12850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|PTHR36929|PTHR36929:SF1|SSF55961 NIDE_RS12855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021342 Protein of unknown function DUF2959 PF11172 NIDE_RS12860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30118|PTHR30118:SF5|SSF46785|SSF53850 NIDE_RS12865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008854|IPR022474|IPR025835|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|TPMT family|Thiopurine S-methyltransferase|Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0008757|GO:0010038|GO:0032259 G3DSA:3.40.50.150|MF_00812|PF05724|PIRSF023956|PTHR10259|PTHR10259:SF16|SSF53335|TIGR03840 NIDE_RS12870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|PTHR23501|SSF103473 NIDE_RS12875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001697|IPR011037|IPR015793|IPR015794|IPR015795|IPR015806|IPR015813 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, alpha/beta|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PTHR11817|SSF50800|SSF51621|SSF52935|TIGR01064 NIDE_RS12880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284|IPR014304 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-Z type|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF23|SSF88659|SSF88946|TIGR02937|TIGR02959 NIDE_RS12885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR41294|PTHR41294:SF1|SSF54593 NIDE_RS12890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002734|IPR024072 Bacterial bifunctional deaminase-reductase, C-terminal|Dihydrofolate reductase-like domain GO:0008703|GO:0009231|GO:0055114 G3DSA:3.40.430.10|PF01872|PTHR38011|SSF53597 NIDE_RS12895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010767 Campylobacter phage CGC-2007, Cje0229 PF07087 NIDE_RS12900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021796 Protein of unknown function DUF3365 PF11845 NIDE_RS12905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007263 Protein of unknown function DUF393 PF04134|PTHR33639 NIDE_RS12910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001307|IPR001763 Rhodanese-like domain|Thiosulphate sulfurtransferase, conserved site GO:0004792 G3DSA:3.40.250.10|PF00581|PS00380|PTHR12231|SM00450|SSF52821 NIDE_RS12915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0005975 G3DSA:3.20.20.80|SSF51445 NIDE_RS12920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006|IPR013976|IPR014626 CheY-like superfamily|Metal-dependent hydrolase HDOD|Signal transduction response regulator with modified HD-GYP domain, putative|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3150.10|G3DSA:3.40.50.2300|PF00072|PF08668|PIRSF036883|PTHR33525|PTHR33525:SF3|SM00448|SSF109604|SSF52172 NIDE_RS12925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010054|IPR013545 General secretion pathway protein G|Type II secretion system protein G GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF08334|PTHR30093|PTHR30093:SF9|SSF54523|TIGR01710 NIDE_RS12935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163|IPR020593 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|GPR domain|Gamma-glutamyl phosphate reductase GPR, conserved site|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0050661|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PS01223|PTHR11063|PTHR11063:SF8|SSF53720|TIGR00407 NIDE_RS12950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007690|IPR014717 Translation elongation factor EF1B/ribosomal protein S6|Type II secretion system, protein M GO:0006858 G3DSA:3.30.70.60|PF10741 NIDE_RS12955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007813 Fimbrial assembly PilN PF05137 NIDE_RS12965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001482|IPR007831|IPR027417 General secretory system II, protein E, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PF05157|PS00662|PTHR30258|PTHR30258:SF1|SSF160246|SSF52540 NIDE_RS12970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001992|IPR003004|IPR018076 GspF/PilC family|Type II secretion system F domain|Type II secretion system conserved site GO:0009306|GO:0016020 PF00482|PR00812|PS00874|PTHR30012|PTHR30012:SF0 NIDE_RS12975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018392 LysM domain G3DSA:3.10.350.10|PF01476|SM00257|SSF54106 NIDE_RS12980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000983|IPR012902 Bacterial general secretion pathway protein G-type pilin|Prokaryotic N-terminal methylation site GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF13633|PR00813|PTHR30093|PTHR30093:SF6|SSF54523|TIGR02532 NIDE_RS12985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000983|IPR012902 Bacterial general secretion pathway protein G-type pilin|Prokaryotic N-terminal methylation site GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF13544|PR00813|PS00409|SSF54523|TIGR02532 NIDE_RS12990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001775|IPR002102|IPR004846|IPR005644|IPR008965|IPR011990|IPR019734 Carbohydrate-binding domain|Cellulosome anchoring protein, cohesin domain|GspD/PilQ family|NolW-like|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Type II/III secretion system GO:0000272|GO:0005515|GO:0009306|GO:0030246 G3DSA:1.25.40.10|G3DSA:2.60.40.680|PF00263|PF03958|PR00811|PTHR30332|PTHR30332:SF7|SM00028|SSF48452|SSF49384 NIDE_RS12995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028359 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0016616|GO:0016628|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|PTHR11374|PTHR11374:SF25|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 NIDE_RS13000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 NIDE_RS13015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001270|IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|ClpA/B family|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PR00300|PTHR30050|SM00382|SSF52540 NIDE_RS13020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR35004|PTHR35004:SF2|SSF53098 NIDE_RS13030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025948 HTH-like domain PF13276 NIDE_RS13055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF13692|SSF53756 NIDE_RS13060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PF13439|PF13692|PTHR12526|SSF53756 NIDE_RS13065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 NIDE_RS13070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 NIDE_RS13075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF13231 NIDE_RS13080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007016 O-antigen ligase-related PF04932 NIDE_RS13085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009057|IPR012337 Homeodomain-like|Ribonuclease H-like domain GO:0003676|GO:0003677 G3DSA:3.30.420.10|PF13358|PF13565|PTHR30347|PTHR30347:SF1|SSF46689|SSF53098 NIDE_RS13090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 NIDE_RS13095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017867|IPR023485 Phosphotyrosine protein phosphatase I superfamily|Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 G3DSA:3.40.50.270|PF01451|PR00719|PTHR11717|SM00226|SSF52788 NIDE_RS13100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Pre-ATP-grasp domain GO:0003824|GO:0005524 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|SSF56059 NIDE_RS13105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PTHR34216|SSF88713 NIDE_RS13115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF50|SSF53448 NIDE_RS13120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF13|SSF53383 NIDE_RS13125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016181|IPR017469 Acyl-CoA N-acyltransferase|PEP-CTERM system-associated, FemAB-related G3DSA:3.40.630.30|PF13480|SSF55729|TIGR03019 NIDE_RS13130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PF13439|SSF53756 NIDE_RS13135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001962|IPR006426|IPR014729|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|PTHR11772|PTHR11772:SF10|SSF52402|SSF56235|TIGR01536 NIDE_RS13140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF399|SSF51735 NIDE_RS13145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003696|IPR031730 Carbamoyltransferase|Carbamoyltransferase, C-terminal GO:0003824|GO:0009058 PF02543|PF16861|PTHR34847|SSF53067 NIDE_RS13155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 NIDE_RS13160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|PTHR12526|SSF53756 NIDE_RS13165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF37|SSF51735 NIDE_RS13170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|SSF52266 NIDE_RS13180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|SSF52266 NIDE_RS13185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|SSF53756 NIDE_RS13195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF466|SSF51735 NIDE_RS13200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008775 Phytanoyl-CoA dioxygenase G3DSA:2.60.120.620|PF05721|SSF51197 NIDE_RS13205 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012353|IPR032589|IPR032610|IPR032622 Domain of unknown function DUF2172|Domain of unknown function DUF4910|UCP01524, winged helix-turn-helix domain|Uncharacterised conserved protein UCP01524, polysaccharide biosynthesis aminopeptidase-like G3DSA:3.40.630.10|PF09940|PF16221|PF16254|PIRSF015244|SSF53187 NIDE_RS13210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013630|IPR013691|IPR029063 C-methyltransferase|Methyltransferase putative zinc binding domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF08421|PF08484|PF13489|PTHR10108|PTHR10108:SF714|SSF53335 NIDE_RS13215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028357 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|PTHR11374|PTHR11374:SF18|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 NIDE_RS13220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF35|SSF51735 NIDE_RS13225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005835|IPR013446|IPR029044 Glucose-1-phosphate cytidylyltransferase|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779|GO:0047343 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF16|SSF53448|TIGR02623 NIDE_RS13230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF117|SM00382|SSF52540 NIDE_RS13235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PTHR30413|PTHR30413:SF8 NIDE_RS13240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002509|IPR011330|IPR014344|IPR022560 Domain of unknown function DUF3473|Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain|PEP-CTERM locus, polysaccharide deactylase GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PF11959|PTHR10587|PTHR10587:SF85|SSF88713|TIGR03006 NIDE_RS13245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003362|IPR016040|IPR017464|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase|NAD(P)-binding domain|Sugar transferase, PEP-CTERM system associated G3DSA:3.40.50.720|PF02397|PTHR30576|PTHR30576:SF0|TIGR03013|TIGR03025 NIDE_RS13250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002586|IPR003856|IPR027417|IPR032807 CobQ/CobB/MinD/ParA nucleotide binding domain|Lipopolysaccharide biosynthesis|P-loop containing nucleoside triphosphate hydrolase|Tyrosine kinase, G-rich domain GO:0009103|GO:0016020 G3DSA:3.40.50.300|PF01656|PF02706|PF13807|PTHR32309|PTHR32309:SF13|SSF52540 NIDE_RS13260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531|PTHR33619 NIDE_RS13265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531|PTHR33619 NIDE_RS13270 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 PF07238 NIDE_RS13275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|SM00421|SSF46894 NIDE_RS13280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000399|IPR011766|IPR012001|IPR017684|IPR029061 Phosphonopyruvate decarboxylase|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0000287|GO:0003824|GO:0030976|GO:0032923|GO:0033980 G3DSA:3.40.50.970|PF02775|PF02776|PS00187|PTHR18968|PTHR18968:SF81|SSF52518|TIGR03297 NIDE_RS13285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012698|IPR015813|IPR025877|IPR029044 MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|Phosphoenolpyruvate phosphomutase, core|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0050188 G3DSA:3.20.20.60|G3DSA:3.90.550.10|PF12804|PF13714|PTHR21631|PTHR21631:SF23|SSF51621|SSF53448|TIGR02320 NIDE_RS13295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR011835|IPR013534 Bacterial/plant glycogen synthase|Glycosyl transferase, family 1|Starch synthase, catalytic domain GO:0004373 G3DSA:3.40.50.2000|MF_00484|PF00534|PF08323|PTHR12526|PTHR12526:SF17|SSF53756|TIGR02095 NIDE_RS13305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010376 Domain of unknown function DUF971 PF06155 NIDE_RS13310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003717|IPR012340|IPR022572 DNA replication/recombination mediator RecO, N-terminal|Nucleic acid-binding, OB-fold|Recombination protein O, RecO GO:0006281|GO:0006310 G3DSA:2.40.50.140|MF_00201|PF02565|PF11967|PTHR33991|SSF50249|SSF57863|TIGR00613 NIDE_RS13315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644|IPR006667|IPR006668|IPR006669 CBS domain|Magnesium transporter MgtE|Magnesium transporter, MgtE intracellular domain|SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|PTHR11911|PTHR11911:SF23|SM00116|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 NIDE_RS13320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417 GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0003723|GO:0005525|GO:0005622 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|PR00449|PTHR11649|PTHR11649:SF3|SSF52540|SSF54814|TIGR00231|TIGR00436 NIDE_RS13325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PF04977 NIDE_RS13330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR029065 Enolase|Enolase C-terminal domain-like|Enolase N-terminal domain-like|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|PTHR11902|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 NIDE_RS13340 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003789|IPR004413|IPR006075|IPR017958|IPR017959|IPR018027 Asn/Gln amidotransferase|Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic|Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E|Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016874|GO:0016884 MF_00121|PF02637|PF02934|PS01234|PTHR11659|PTHR11659:SF0|SM00845|SSF55931|SSF89095|TIGR00133 NIDE_RS13345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024623 Uncharacterised protein family YtxH PF12732|PTHR35792|PTHR35792:SF1 NIDE_RS13350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009293 Uncharacterised protein family UPF0478 PF06103 NIDE_RS13355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000120|IPR004412|IPR020556|IPR023631 Amidase|Amidase signature domain|Amidase, conserved site|Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0016884 G3DSA:3.90.1300.10|MF_00120|PF01425|PIRSF001221|PS00571|PTHR11895|PTHR11895:SF75|SSF75304|TIGR00132 NIDE_RS13360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003190|IPR009010 Aspartate decarboxylase|Aspartate decarboxylase-like domain GO:0004068|GO:0006523 G3DSA:2.40.40.20|MF_00446|PD009294|PF02261|PIRSF006246|PTHR21012|PTHR21012:SF0|SSF50692|TIGR00223 NIDE_RS13365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MF_00122|PF02686|PTHR15004|PTHR15004:SF0|SSF141000|TIGR00135 NIDE_RS13370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0005975|GO:0030246|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF01380|PF13522|PTHR10937|PTHR10937:SF0|SSF53697|SSF56235|TIGR01135 NIDE_RS13375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001451|IPR005882|IPR011004|IPR018357|IPR025877|IPR029044 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase|Hexapeptide repeat|Hexapeptide transferase, conserved site|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|Trimeric LpxA-like GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0016740|GO:0019134 G3DSA:2.160.10.10|G3DSA:3.90.550.10|MF_01631|PF00132|PF12804|PS00101|PTHR22572|PTHR22572:SF115|SSF51161|SSF53448|TIGR01173 NIDE_RS13380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007462 Protein of unknown function DUF502 PF04367|PTHR31876|PTHR31876:SF1 NIDE_RS13385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018094|IPR018095|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Thymidylate kinase|Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 G3DSA:3.40.50.300|MF_00165|PF02223|PS01331|PTHR10344|SSF52540|TIGR00041 NIDE_RS13395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002547|IPR004495|IPR009080|IPR012340|IPR014729|IPR014758|IPR015413|IPR023457 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Methionine-tRNA synthetase, type 2|Methionyl-tRNA synthetase|Methionyl-tRNA synthetase, beta subunit, C-terminal|Methionyl/Leucyl tRNA synthetase|Nucleic acid-binding, OB-fold|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-binding domain GO:0000049|GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.170.220.10|G3DSA:2.40.50.140|G3DSA:3.40.50.620|MF_01228|PF01588|PF09334|PR01041|PTHR11946|PTHR11946:SF1|SSF47323|SSF50249|SSF52374|TIGR00398|TIGR00399 NIDE_RS13405 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0016020 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PS00674|PTHR23076|SM00382|SSF140990|SSF52540|TIGR01241 NIDE_RS13410 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002524|IPR027469|IPR027470 Cation efflux protein|Cation efflux protein transmembrane domain|Cation efflux protein, cytoplasmic domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|PF01545|PTHR11562|SSF160240|SSF161111|TIGR01297 NIDE_RS13420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003495|IPR011629|IPR012824|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0009236 G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|PTHR13748:SF10|SM00833|SSF52540|SSF90002 NIDE_RS13430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012933 HicA mRNA interferase family GO:0003729 G3DSA:3.30.920.30|PF07927|SSF54786 NIDE_RS13435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF143100 NIDE_RS13455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019026 Peptidase M64, IgA G3DSA:2.120.10.70|PF09471|SSF89372 NIDE_RS13460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010879 Domain of unknown function DUF1508 G3DSA:3.30.160.160|PF07411|SSF160113 NIDE_RS13505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001736|IPR025202 Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824 G3DSA:3.30.870.10|PF13091|SM00155|SSF56024 NIDE_RS13515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019026 Peptidase M64, IgA PF09471 NIDE_RS13545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003812|IPR025758|IPR026287 Adenosine monophosphate-protein transferase|Fic/DOC N-terminal|Fido domain G3DSA:1.10.3290.10|PF02661|PF13784|PIRSF038925|PTHR13504|PTHR13504:SF32|SSF140931 NIDE_RS13555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30158|PTHR30158:SF2|SSF111369|TIGR01730 NIDE_RS13560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|PTHR32063|PTHR32063:SF11|SSF82693|SSF82714|SSF82866|TIGR00915 NIDE_RS13570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR008969|IPR012910|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|G3DSA:2.60.40.1120|PF00593|PF07715|PF13620|SSF49464|SSF56935 NIDE_RS13580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006218|IPR006219|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1 GO:0003824|GO:0003849|GO:0009058|GO:0009073 G3DSA:3.20.20.70|PF00793|PIRSF001361|PTHR21225|SSF51569|TIGR00034 NIDE_RS13585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001130|IPR015991|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family|Uncharacterised deoxyribonuclease TatD-type GO:0004536|GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01090|PS01137|PTHR10060|PTHR10060:SF20|SSF51556|TIGR00010 NIDE_RS13595 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002508|IPR021731 AMIN domain|Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF01520|PF11741|PTHR30404|PTHR30404:SF0|SM00646|SSF53187 NIDE_RS13600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001406|IPR020094|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, N-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|PTHR11142|PTHR11142:SF0|SSF55120|TIGR00071 NIDE_RS13605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011690 Phosphate-starvation-induced PsiF repeat PF07769 NIDE_RS13610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001451|IPR005881|IPR010493|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Serine O-acetyltransferase|Serine acetyltransferase, N-terminal|Trimeric LpxA-like GO:0005737|GO:0006535|GO:0009001|GO:0016740 G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|PF06426|PIRSF000441|PS00101|PTHR23416|PTHR23416:SF55|SSF51161|TIGR01172 NIDE_RS13615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 G3DSA:3.30.1330.50|MF_00107|PF02542|PTHR32125|SSF69765|TIGR00151 NIDE_RS13620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001228|IPR018294|IPR029044 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0008299|GO:0050518 G3DSA:3.90.550.10|MF_00108|PF01128|PS01295|PTHR32125|PTHR32125:SF4|SSF53448|TIGR00453 NIDE_RS13625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002716|IPR002792|IPR029060 PIN domain|PIN domain-like|TRAM domain G3DSA:3.40.50.1010|PF01938|PTHR11603|PTHR11603:SF147|SM00670|SSF88723 NIDE_RS13630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF93|SM00228|SSF50156|SSF50494|TIGR02037 NIDE_RS13635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002915|IPR013785 Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase GO:0003824|GO:0016829 G3DSA:3.20.20.70|PF01791|PIRSF038992|SM01133|SSF51569 NIDE_RS13640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000146|IPR028343|IPR033391 Fructose-1,6-bisphosphatase|Fructose-1,6-bisphosphatase class 1|Fructose-1-6-bisphosphatase class I, N-terminal GO:0005975|GO:0042132|GO:0042578 G3DSA:3.30.540.10|G3DSA:3.40.190.80|MF_01855|PF00316|PIRSF000904|PIRSF500210|PR00115|PTHR11556|SSF56655 NIDE_RS13645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021457 Protein of unknown function DUF3108 PF11306 NIDE_RS13650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PTHR22573|PTHR22573:SF28|SSF53738|SSF55957 NIDE_RS13655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001538|IPR005835|IPR006375|IPR011051|IPR014710|IPR029044 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase|Mannose-6-phosphate isomerase, type II, C-terminal|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0000271|GO:0005976|GO:0009058|GO:0016779 G3DSA:2.60.120.10|G3DSA:3.90.550.10|PF00483|PF01050|PTHR12526|PTHR12526:SF387|SSF51182|SSF53448|TIGR01479 NIDE_RS13660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010023|IPR023214 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase|HAD-like domain GO:0019143 G3DSA:3.40.50.1000|PF08282|PIRSF006118|PTHR21485|PTHR21485:SF3|SSF56784|TIGR01670 NIDE_RS13665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003362|IPR016040|IPR017473|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase|NAD(P)-binding domain|Undecaprenyl-phosphate glucose phosphotransferase, WcaJ G3DSA:3.40.50.720|PF02397|PF13727|PTHR30576|PTHR30576:SF0|SSF51735|TIGR03023|TIGR03025 NIDE_RS13670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|PTHR12526:SF380|SSF53756 NIDE_RS13675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|PTHR12526:SF399|SSF53756 NIDE_RS13680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF13692|SSF53756 NIDE_RS13685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 NIDE_RS13690 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF53756 NIDE_RS13695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|PTHR10108|SSF53335 NIDE_RS13700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 NIDE_RS13705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 NIDE_RS13710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001962|IPR006426|IPR014729|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|PTHR11772|PTHR11772:SF10|SSF52402|SSF56235|TIGR01536 NIDE_RS13715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF53756 NIDE_RS13720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|SSF51735 NIDE_RS13725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003331|IPR020004 UDP-N-acetylglucosamine 2-epimerase domain|UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 G3DSA:3.40.50.2000|PF02350|SSF53756|TIGR03568 NIDE_RS13730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006190|IPR013132|IPR013785|IPR013974 Aldolase-type TIM barrel|Antifreeze-like/N-acetylneuraminic acid synthase C-terminal|N-acetylneuraminic acid synthase, N-terminal|SAF domain GO:0003824|GO:0016051 G3DSA:3.20.20.70|G3DSA:3.90.1210.10|PF03102|PF08666|PTHR23416|PTHR23416:SF1|SM00858|SSF51269|SSF51569 NIDE_RS13735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003329|IPR029044 Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF02348|PTHR21485|PTHR21485:SF20|SSF53448 NIDE_RS13745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13469|SSF52540 NIDE_RS13750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13578|SSF53335 NIDE_RS13755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF13692|SSF53756 NIDE_RS13760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000683|IPR004104|IPR016040 NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PTHR22604|SSF51735|SSF55347 NIDE_RS13765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013630|IPR013691|IPR029063 C-methyltransferase|Methyltransferase putative zinc binding domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF08421|PF08484|PF13489|SSF53335 NIDE_RS13770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF13440|PTHR30250|PTHR30250:SF8 NIDE_RS13775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002891|IPR027417 Adenylyl-sulfate kinase|P-loop containing nucleoside triphosphate hydrolase GO:0000103|GO:0004020|GO:0005524 G3DSA:3.40.50.300|MF_00065|PF01583|PTHR11055|PTHR11055:SF15|SSF52540|TIGR00455 NIDE_RS13785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001962|IPR006426|IPR014729|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13522|PIRSF001589|PTHR11772|PTHR11772:SF10|SSF52402|SSF56235|TIGR01536 NIDE_RS13790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001509|IPR016040|IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0009226|GO:0016491|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00956|PF01370|PTHR10366|PTHR10366:SF246|SSF51735 NIDE_RS13795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006368|IPR016040 GDP-mannose 4,6-dehydratase|NAD(P)-binding domain GO:0008446|GO:0019673 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00955|PF16363|PTHR10366|PTHR10366:SF32|SSF51735|TIGR01472 NIDE_RS13800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007016 O-antigen ligase-related PF04932 NIDE_RS13805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005913|IPR016040|IPR029903 NAD(P)-binding domain|RmlD-like substrate binding domain|dTDP-4-dehydrorhamnose reductase family G3DSA:3.40.50.720|PF04321|PTHR10491|PTHR10491:SF4|SSF51735|TIGR01214 NIDE_RS13810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005888|IPR016040 NAD(P)-binding domain|dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF41|SSF51735|TIGR01181 NIDE_RS13815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF13|SSF53448 NIDE_RS13820 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF191|SSF51905 NIDE_RS13825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|PTHR12526:SF399|SSF53756 NIDE_RS13845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR011990|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases|Tetratricopeptide-like helical domain GO:0005515 G3DSA:3.90.550.10|PF00535|PTHR22916|SSF48452|SSF53448 NIDE_RS13850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002201|IPR011910|IPR011916 Glycosyl transferase, family 9|Lipopolysaccharide heptosyltransferase II|Lipopolysaccharide heptosyltransferase III, putative GO:0008152|GO:0009103|GO:0016757 G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF1|SSF53756|TIGR02195|TIGR02201 NIDE_RS13855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 NIDE_RS13860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|SSF53448 NIDE_RS13865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF99|SSF53448 NIDE_RS13870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|PTHR10342|PTHR10342:SF236|SSF53649 NIDE_RS13875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 NIDE_RS13880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF7|SSF53756 NIDE_RS13885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002201|IPR011910 Glycosyl transferase, family 9|Lipopolysaccharide heptosyltransferase II GO:0008152|GO:0009103|GO:0016757 G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF7|SSF53756|TIGR02195 NIDE_RS13890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003758|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 G3DSA:3.40.50.300|MF_00409|PF02606|PTHR30160|PTHR30160:SF13|SSF52540|TIGR00682 NIDE_RS13895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal G3DSA:3.40.50.2000|PF04413|PTHR23417|PTHR23417:SF2|SSF53756 NIDE_RS13900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007172 Domain of unknown function DUF374 PD032436|PF04028 NIDE_RS13905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR011527|IPR011917|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter, lipid A export, MsbA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0034040|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123|TIGR02203 NIDE_RS13910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 G3DSA:3.40.50.2000|PF02684|PTHR30372|PTHR30372:SF0|SSF53756|TIGR00215 NIDE_RS13915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PTHR22604|PTHR22604:SF14|SSF51735|SSF55347 NIDE_RS13920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010415 Protein of unknown function DUF1009 PF06230|PTHR39962|PTHR39962:SF1 NIDE_RS13925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001451|IPR010137|IPR011004|IPR018357|IPR029098 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like|Udp N-acetylglucosamine O-acyltransferase, C-terminal GO:0008610|GO:0008780|GO:0016740 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|MF_00387|PF00132|PF13720|PIRSF000456|PS00101|PTHR23416|PTHR23416:SF8|SSF51161|TIGR01852 NIDE_RS13930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010084|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain GO:0005737|GO:0006633|GO:0016836 G3DSA:3.10.129.10|MF_00406|PF07977|PTHR30272|SSF54637|TIGR01750 NIDE_RS13935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|PTHR35089|SM00935|SSF111384 NIDE_RS13940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|PTHR35089|PTHR35089:SF1|SM00935|SSF111384 NIDE_RS13945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000184|IPR010827|IPR023707 Bacterial surface antigen (D15)|Outer membrane protein assembly factor BamA|Surface antigen variable number GO:0019867|GO:0071709 G3DSA:2.40.160.50|PF01103|PF07244|PIRSF006076|PTHR12815|PTHR12815:SF11|TIGR03303 NIDE_RS13950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005771|IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011|GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF14|SSF53448|TIGR01099 NIDE_RS13955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027065|IPR027417|IPR027543 AAA+ ATPase domain|ATP-dependent protease La (LON), substrate-binding domain|ATPase, AAA-type, core|Lon protease|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163|GO:0043565 G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|PTHR10046|PTHR10046:SF24|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 NIDE_RS13960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006283|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Thiamine-monophosphate kinase GO:0009030|GO:0009228 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_02128|PF00586|PF02769|PIRSF005303|PTHR30270|PTHR30270:SF0|SSF55326|SSF56042|TIGR01379 NIDE_RS13965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018639 Domain of unknown function DUF2062 PF09835|PTHR40547|PTHR40547:SF1 NIDE_RS13970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF01966|PTHR11373|PTHR11373:SF4|SM00471|SSF109604 NIDE_RS13975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF08447|PF13426|PR00344|PTHR24423|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS13980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS13995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004347|IPR022279 Pup ligase/deamidase|Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 PF03136|PTHR42307|PTHR42307:SF1|TIGR03686 NIDE_RS14000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001353|IPR022296|IPR029055 Nucleophile aminohydrolases, N-terminal|Proteasome, alpha subunit, bacterial|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0019773|GO:0051603 G3DSA:3.60.20.10|PF00227|PTHR11599|PTHR11599:SF38|SSF56235|TIGR03691 NIDE_RS14005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001353|IPR022483|IPR029055 Nucleophile aminohydrolases, N-terminal|Peptidase T1A, proteasome beta-subunit, actinobacteria|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0010498|GO:0051603 G3DSA:3.60.20.10|PF00227|PTHR11599|PTHR11599:SF58|SSF56235|TIGR03690 NIDE_RS14010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004347|IPR022366 Pup deamidase|Pup ligase/deamidase GO:0008233|GO:0010498|GO:0016811|GO:0019941 PF03136|PTHR42307|PTHR42307:SF2|TIGR03688 NIDE_RS14015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR003959|IPR003960|IPR022482|IPR027417|IPR032501 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Proteasomal ATPase, OB/ID domain|Proteasome ATPase GO:0000502|GO:0005524|GO:0010498|GO:0016887|GO:0019941 G3DSA:3.40.50.300|MF_02112|PF00004|PF16450|PS00674|PTHR23077|PTHR23077:SF27|SM00382|SSF52540|TIGR03689 NIDE_RS14020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003733|IPR013785|IPR022998 Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|MF_00097|PF02581|PTHR20857|PTHR20857:SF21|SSF51391|TIGR00693 NIDE_RS14025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008867|IPR013785 Aldolase-type TIM barrel|Thiazole biosynthesis GO:0003824|GO:0009228 G3DSA:3.20.20.70|MF_00443|PF05690|PTHR34266|PTHR34266:SF2|SSF110399 NIDE_RS14030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003749|IPR010035|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiS, thiamine-biosynthesis|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|PTHR34472|PTHR34472:SF1|SSF54285|TIGR01683 NIDE_RS14035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010996|IPR027420 DNA polymerase beta, N-terminal domain|DNA polymerase beta-like, N-terminal domain G3DSA:1.10.8.310|PF14716|PTHR11276|SSF47802 NIDE_RS14040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF00595|PF03572|PTHR32060|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 NIDE_RS14050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003838|IPR004513 ABC transporter permease protein domain|Cell division protein FtsX GO:0007049|GO:0016020|GO:0016021 PF02687|PIRSF003097 NIDE_RS14055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR005286|IPR027417 AAA+ ATPase domain|ABC transporter-like|Cell division protein FtsE, ATP-binding|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0051301 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF470|SM00382|SSF52540|TIGR02673 NIDE_RS14060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003509|IPR011335|IPR011856 Restriction endonuclease type II-like|Uncharacterised protein family UPF0102|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|MF_00048|PF02021|PTHR34039|PTHR34039:SF1|SSF52980|TIGR00252 NIDE_RS14065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001352|IPR012337|IPR022898|IPR024567 Ribonuclease H-like domain|Ribonuclease HII|Ribonuclease HII/HIII|Ribonuclease HII/HIII domain GO:0003676|GO:0003723|GO:0004523 G3DSA:3.30.420.10|MF_00052_B|PF01351|PTHR10954|PTHR10954:SF7|SSF53098 NIDE_RS14070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001857|IPR008991|IPR018257 Ribosomal protein L19|Ribosomal protein L19, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00402|PF01245|PIRSF002191|PR00061|PS01015|PTHR15680|SSF50104|TIGR01024 NIDE_RS14075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002649|IPR016009|IPR023148|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, C-terminal|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PIRSF000386|PTHR32125|PTHR32125:SF1|SSF75217|TIGR00088 NIDE_RS14080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002676|IPR009000|IPR011033|IPR011961 16S rRNA processing protein RimM|PRC-barrel-like|RimM protein|Translation protein, beta-barrel domain GO:0005840|GO:0006364|GO:0043022 G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|PTHR33692|SSF50346|SSF50447|TIGR02273 NIDE_RS14085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000307|IPR020592|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain|Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|PS00732|PTHR12919|SSF54565|TIGR00002 NIDE_RS14090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|PTHR11564|PTHR11564:SF7|SM00382|SM00962|SM00963|SSF47446|SSF52540|TIGR00959 NIDE_RS14095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025470 Protein of unknown function DUF4321 PF14209 NIDE_RS14100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432|GO:0016787 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|PTHR24029|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 NIDE_RS14105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004175|IPR009097|IPR014051 Phosphoesterase, HXTX|RNA 2',3'-cyclic phosphodiesterase|RNA ligase/cyclic nucleotide phosphodiesterase GO:0004113|GO:0008664 G3DSA:3.90.1140.10|MF_01940|PF02834|PTHR35561|PTHR35561:SF1|SSF55144|TIGR02258 NIDE_RS14110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001453|IPR008135|IPR008136 CinA, C-terminal|Competence-induced protein CinA|MoaB/Mog domain G3DSA:3.40.980.10|G3DSA:3.90.950.20|MF_00226_B|PF00994|PF02464|PIRSF006728|PTHR13939|PTHR13939:SF0|SM00852|SSF142433|SSF53218|TIGR00199|TIGR00200 NIDE_RS14120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010644|IPR011008 Dimeric alpha-beta barrel|Putative heme-dependent peroxidase/Chlorite dismutase G3DSA:3.30.70.1030|G3DSA:3.30.70.1100|PF06778|PTHR36843|PTHR36843:SF1|SSF54909 NIDE_RS14145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 G3DSA:3.10.50.40|PF00254|SSF54534 NIDE_RS14150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009045|IPR010275 Hedgehog signalling/DD-peptidase zinc-binding domain|Protein of unknown function DUF882 G3DSA:3.30.1380.10|PF05951|PTHR37425|SSF55166 NIDE_RS14155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS14165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS14175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|PTHR21340|SSF55811 NIDE_RS14180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF508|SM00822|SSF51735 NIDE_RS14185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008269|IPR014721|IPR020568 Peptidase S16, Lon C-terminal|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0006508 G3DSA:3.30.230.10|PF05362|SSF54211 NIDE_RS14190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734|IPR024983 CHAT domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF12770|PF13374|PF13424|PTHR10098|PTHR10098:SF104|SM00028|SSF48452 NIDE_RS14195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008638|IPR011050|IPR012334 Filamentous haemagglutinin, N-terminal|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05860|SM00912|SSF51126|TIGR01901 NIDE_RS14200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000184|IPR013686 Bacterial surface antigen (D15)|Polypeptide-transport-associated, ShlB-type GO:0019867 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF01103|PF08479|PTHR34597|PTHR34597:SF1 NIDE_RS14205 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40 NIDE_RS14210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PTHR10909|PTHR10909:SF145|SSF47203|SSF56645 NIDE_RS14215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PTHR14226|SSF52151 NIDE_RS14220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|SSF52096 NIDE_RS14225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006108|IPR006176|IPR006180|IPR008927|IPR013328|IPR016040 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PS00067|PTHR23309|SSF48179|SSF51735 NIDE_RS14230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00099|PS00737|PTHR18919|SSF53901|TIGR01930 NIDE_RS14235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24096|PTHR24096:SF208|SSF56801 NIDE_RS14240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016084|IPR028201 Haem oxygenase-like, multi-helical|PqqC-like protein G3DSA:1.20.910.10|PF14518|SM01236|SSF48613 NIDE_RS14245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13669|SSF54593 NIDE_RS14250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005708|IPR011051|IPR014710 Homogentisate 1,2-dioxygenase|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0004411|GO:0006559|GO:0006570|GO:0055114 G3DSA:2.60.120.10|PF04209|PTHR11056|SSF51182 NIDE_RS14255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PTHR11820|PTHR11820:SF88|SSF56529 NIDE_RS14260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029057 Phosphoribosyltransferase-like G3DSA:3.40.50.2020|SSF53271 NIDE_RS14265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001017|IPR029061 Dehydrogenase, E1 component|Thiamin diphosphate-binding fold GO:0008152|GO:0016624 G3DSA:3.40.50.970|PF00676|PTHR11516|PTHR11516:SF39|SSF52518 NIDE_RS14270 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005475|IPR009014|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF02779|PF02780|PTHR11624|SM00861|SSF52518|SSF52922 NIDE_RS14275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|E3-binding domain|Single hybrid motif GO:0008152|GO:0016746 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|PTHR23151|SSF47005|SSF51230|SSF52777 NIDE_RS14280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|PTHR18919|PTHR18919:SF110|SSF53901|TIGR01930 NIDE_RS14285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006108|IPR006176|IPR006180|IPR008927|IPR013328|IPR016040|IPR022694 3-hydroxyacyl-CoA dehydrogenase|3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114|GO:0070403 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PIRSF000105|PS00067|PTHR23309|SSF48179|SSF51735 NIDE_RS14290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006098|IPR006099|IPR014348|IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic|Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain|Methylmalonyl-CoA mutase, alpha chain, catalytic|Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0003824|GO:0004494|GO:0008152|GO:0016866|GO:0031419 G3DSA:3.20.20.240|PF01642|PTHR23408|PTHR23408:SF18|SSF51703|TIGR00641 NIDE_RS14295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR23200|PTHR23200:SF41|SM00849|SSF56281 NIDE_RS14300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006158|IPR006159 Cobalamin (vitamin B12)-binding domain|Methylmalonyl-CoA mutase, C-terminal GO:0016853|GO:0031419|GO:0046872 G3DSA:3.40.50.280|PF02310|PTHR23408|PTHR23408:SF8|SSF52242|TIGR00640 NIDE_RS14305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000022|IPR029045 Carboxyl transferase|ClpP/crotonase-like domain G3DSA:3.90.226.10|PF01039|PTHR22855|PTHR22855:SF35|SSF52096 NIDE_RS14310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001753|IPR014748|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PTHR11941|PTHR11941:SF86|SSF52096 NIDE_RS14315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000891|IPR013785 Aldolase-type TIM barrel|Pyruvate carboxyltransferase GO:0003824 G3DSA:3.20.20.70|PF00682|PTHR10277|PTHR10277:SF1|SSF51569 NIDE_RS14320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR005129|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 G3DSA:3.40.50.300|PF03308|PTHR23408|PTHR23408:SF3|SM00382|SSF52540|TIGR00750 NIDE_RS14325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|PTHR16943|PTHR16943:SF19|SSF103378 NIDE_RS14330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012695|IPR015813|IPR018523 2-methylisocitrate lyase|Isocitrate lyase/phosphorylmutase, conserved site|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0008152|GO:0019629|GO:0046421 G3DSA:3.20.20.60|PF13714|PS00161|PTHR21631|PTHR21631:SF4|SSF51621|TIGR02317 NIDE_RS14335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002020|IPR011278|IPR016142|IPR016143|IPR024176 2-methylcitrate synthase/citrate synthase type I|Citrate synthase|Citrate synthase, bacterial-type|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0005737|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PTHR11739|PTHR11739:SF4|SSF48256|TIGR01800 NIDE_RS14340 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000873|IPR020459|IPR020845|IPR025110 AMP-binding|AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PR00154|PS00455|PTHR24096|SSF56801 NIDE_RS14345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PTHR10909|PTHR10909:SF121|SSF47203|SSF56645 NIDE_RS14350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006685|IPR010920|IPR011014|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PTHR30460|PTHR30460:SF0|SSF50182|SSF82689|SSF82861 NIDE_RS14360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13174|PF13414|PF13432|PTHR23083|SM00028|SSF48452 NIDE_RS14370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002126|IPR015919|IPR025592 Cadherin|Cadherin-like|Domain of unknown function DUF4347 GO:0005509|GO:0007156|GO:0016020 G3DSA:2.60.40.60|PF00028|PF14252|PF16184|PTHR24027|SM00112|SSF49313 NIDE_RS14375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001193 Membrane-bound transcription factor site-2 protease GO:0004222|GO:0006508|GO:0016020 G3DSA:2.40.50.100|PF13437|PF13533|PTHR13325|PTHR13325:SF4|SSF111369 NIDE_RS14380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:2.40.50.100|PF16576|PTHR32347|SSF111369 NIDE_RS14385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|SSF111369|TIGR01730 NIDE_RS14390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|SSF56954 NIDE_RS14400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR006197|IPR006200|IPR010982|IPR015927|IPR019759|IPR028360 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Transcription regulator LexA GO:0003677|GO:0004252|GO:0006355|GO:0009432|GO:0043565|GO:0045892 G3DSA:1.10.260.40|G3DSA:2.10.109.10|PF00717|PF01381|PR00726|PTHR33516|PTHR33516:SF2|SM00530|SSF47413|SSF51306|TIGR00498 NIDE_RS14410 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 PF05818 NIDE_RS14415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR005116|IPR008995|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 1 GO:0005524|GO:0016887 G3DSA:2.40.50.100|G3DSA:3.40.50.300|PF00005|PF03459|PS00211|PTHR24220|PTHR24220:SF282|SM00382|SSF50331|SSF52540 NIDE_RS14420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000515|IPR011867 ABC transporter type 1, transmembrane domain MetI-like|Molybdate ABC transporter, permease protein GO:0006810|GO:0015098|GO:0015689|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30183|SSF161098|TIGR02141 NIDE_RS14425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004606|IPR005116|IPR008995 Molybdate/tungstate binding, C-terminal|Molybdenum-pterin binding|Transport-associated OB, type 1 GO:0006810|GO:0030151 G3DSA:2.40.50.100|PF03459|SSF50331|TIGR00638 NIDE_RS14435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PIRSF004846|PTHR30632|PTHR30632:SF0|SSF53850|TIGR01256 NIDE_RS14440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010870|IPR023614 Phosphate-selective porin O/P|Porin domain G3DSA:2.40.160.10|PF07396|SSF56935 NIDE_RS14450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PTHR30632|SSF53850|TIGR01256 NIDE_RS14455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR010982|IPR024370 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|PBP domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:3.40.190.10|PF01381|PF12727|PTHR38431|SM00530|SSF47413|SSF53850 NIDE_RS14460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023614 Porin domain G3DSA:2.40.160.10|SSF56935 NIDE_RS14465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PIRSF004846|PTHR30632|SSF53850|TIGR01256 NIDE_RS14475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016772 Uncharacterised conserved protein UCP020408 PF10087 NIDE_RS14480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 G3DSA:3.40.190.10|PF13531|PTHR30368|PTHR30368:SF2|SSF53850|TIGR00971 NIDE_RS14490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS14495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011576|IPR012349 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|PTHR30212|PTHR30212:SF3|SSF50475 NIDE_RS14500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003029|IPR006641|IPR010994|IPR012337|IPR012340|IPR018974|IPR022967|IPR023097|IPR023319|IPR023323|IPR032639 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease H-like domain|RuvA domain 2-like|S1 domain|Tex RuvX-like domain|Tex protein, YqgF-like domain|Tex-like domain|Tex-like protein, HTH domain|Tex-like protein, N-terminal|YqgF/RNase H-like domain GO:0003676|GO:0006139 G3DSA:1.10.10.650|G3DSA:1.10.150.310|G3DSA:1.10.3500.10|G3DSA:2.40.50.140|G3DSA:3.30.420.140|PF00575|PF09371|PF12836|PF16921|PTHR10724|PTHR10724:SF1|SM00316|SM00732|SSF158832|SSF47781|SSF50249|SSF53098 NIDE_RS14505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003855|IPR023051 Potassium transporter|Potassium uptake protein, low affinity, Kup GO:0015079|GO:0016020|GO:0071805 MF_01522|PF02705|PTHR30540|PTHR30540:SF7 NIDE_RS14510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001537|IPR016914|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (cytidine/uridine-2'-O-)-methyltransferase|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0001510|GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.40.1280.10|MF_01885|PF00588|PIRSF029256|PTHR12029|PTHR12029:SF31|SSF75217|TIGR00185 NIDE_RS14515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008331|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|SSF47240 NIDE_RS14520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain|Domain of unknown function DUF933|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|PTHR23305|SSF52540|SSF81271|TIGR00092 NIDE_RS14525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011004 Trimeric LpxA-like G3DSA:2.160.10.10|PTHR13061|PTHR13061:SF8|SSF51161 NIDE_RS14530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013781|IPR015883|IPR017853 Glycoside hydrolase family 20, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0004553|GO:0005975 G3DSA:3.20.20.80|PF00728|SSF51445 NIDE_RS14545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005886|IPR016040 NAD(P)-binding domain|UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF39|SSF51735|TIGR01179 NIDE_RS14555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PTHR23077|PTHR23077:SF75|SM00382|SSF52540 NIDE_RS14560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PTHR23083|SM00028|SSF48452 NIDE_RS14565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008183|IPR011013|IPR014718 Aldose 1-/Glucose-6-phosphate 1-epimerase|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0016853|GO:0030246 G3DSA:2.70.98.10|PF01263|PTHR10091|SSF74650 NIDE_RS14570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000023|IPR011403|IPR022953 ATP-dependent 6-phosphofructokinase|Phosphofructokinase domain|Pyrophosphate-dependent phosphofructokinase TM0289 type GO:0003872|GO:0006002|GO:0006096|GO:0047334 G3DSA:3.40.50.450|MF_01979|PF00365|PIRSF036482|PR00476|PTHR13697|PTHR13697:SF2|SSF53784 NIDE_RS14575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 G3DSA:3.10.50.40|PF00254|SSF54534 NIDE_RS14580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001650|IPR011545|IPR014001|IPR027417 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PTHR24031|SM00487|SM00490|SSF52540 NIDE_RS14600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR031849 Domain of unknown function DUF5069 PF16798 NIDE_RS14605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007484 Peptidase M28 G3DSA:3.40.630.10|G3DSA:3.50.30.30|PF04389|PTHR12147|PTHR12147:SF16|SSF52025|SSF53187 NIDE_RS14610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008928|IPR010401|IPR032790|IPR032856 Glycogen debranching enzyme|Glycogen debranching enzyme, C-terminal|Putative glycogen debranching enzyme, N-terminal|Six-hairpin glycosidase-like GO:0003824|GO:0004134|GO:0004135|GO:0005980 PF06202|PF14742|PTHR10569|PTHR10569:SF1|SSF48208 NIDE_RS14615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010290|IPR020846|IPR022324 Bacilysin exporter BacE, putative|Major facilitator superfamily domain|Transmembrane secretion effector GO:0016020|GO:0042891 G3DSA:1.20.1250.20|PF05977|PR01988|PTHR23513|SSF103473 NIDE_RS14625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010290|IPR020846|IPR022324 Bacilysin exporter BacE, putative|Major facilitator superfamily domain|Transmembrane secretion effector GO:0016020|GO:0042891 G3DSA:1.20.1250.20|PF05977|PR01988|PTHR23513|SSF103473 NIDE_RS14630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 NIDE_RS14640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF7|SSF56954 NIDE_RS14650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PTHR12553|PTHR12553:SF50|SSF56281 NIDE_RS14660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003477|IPR011067 Plasmid maintenance toxin/Cell growth inhibitor|mRNA interferase PemK-like protein GO:0003677 G3DSA:2.30.30.110|PF02452|PTHR33988|SSF50118 NIDE_RS14665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021558 Protein of unknown function DUF3018 PF11455 NIDE_RS14670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002227|IPR008922|IPR019546|IPR022739 Polyphenol oxidase, central domain|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal|Tyrosinase copper-binding domain|Uncharacterised domain, di-copper centre GO:0004097|GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1280.10|PF00264|PF12142|PR00092|PS00497|PS00498|PTHR11474|PTHR11474:SF16|SSF48056|TIGR01409 NIDE_RS14680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025745 Restriction system protein Mrr-like N-terminal domain PF14338 NIDE_RS14700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 G3DSA:3.30.2140.10|PF00797|PR01543|PTHR11786|SSF54001 NIDE_RS14705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004602|IPR013815|IPR017871|IPR027417 ABC transporter, conserved site|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|PS00211|PTHR32282|PTHR32282:SF2|SSF52540|TIGR00630 NIDE_RS14710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003774 Protein of unknown function UPF0301 G3DSA:3.30.70.1300|G3DSA:3.40.1740.10|MF_00758|PF02622|PTHR30327|PTHR30327:SF1|SSF143456 NIDE_RS14715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PTHR23088|SSF56317 NIDE_RS14720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029048|IPR031877 Heat shock protein 70kD, C-terminal domain|Metal-binding protein SmbP GO:0046872 G3DSA:1.20.1270.10|PF16785 NIDE_RS14725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PTHR11364|SM00450|SSF52821 NIDE_RS14730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011031|IPR023155 Cytochrome c-552/4|Multihaem cytochrome G3DSA:1.10.710.10|PF13435|SSF48695 NIDE_RS14735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|PTHR10625|PTHR10625:SF104|SSF52768 NIDE_RS14750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001567|IPR013647|IPR024079 Metallopeptidase, catalytic domain|Oligopeptidase F, N-terminal domain|Peptidase M3A/M3B GO:0004222|GO:0006508|GO:0008237 G3DSA:3.40.390.10|PF01432|PF08439|PTHR11804|PTHR11804:SF8|SSF55486 NIDE_RS14755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 NIDE_RS14760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS14765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10 NIDE_RS14770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS14775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007438 Protein of unknown function DUF488 PF04343|PTHR36849|PTHR36849:SF1 NIDE_RS14780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007891 CHASE3 PF05227 NIDE_RS14785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF13247|PTHR11938|PTHR11938:SF8|SSF54862 NIDE_RS14790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006656|IPR009010|IPR019546 Aspartate decarboxylase-like domain|Molybdopterin oxidoreductase|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0016491|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF10518|PTHR11615|PTHR11615:SF167|SSF50692|SSF53706 NIDE_RS14795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002078|IPR003018|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417|IPR029016 AAA+ ATPase domain|GAF domain|GAF domain-like|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005515|GO:0005524|GO:0006355|GO:0008134 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.40|G3DSA:3.40.50.300|PF00158|PF13185|PS00675|PS00676|PS00688|PTHR32071|PTHR32071:SF16|SM00065|SM00382|SSF52540|SSF55781 NIDE_RS14800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:2.40.50.100|PF13437|PF13533|PTHR30386|PTHR30386:SF6|SSF111369 NIDE_RS14805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|PTHR30203|PTHR30203:SF6|SSF56954|TIGR01845 NIDE_RS14810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF52|SSF103473|TIGR00711 NIDE_RS14815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000292|IPR023271 Aquaporin-like|Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF01226|PTHR30520 NIDE_RS14825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR003594|IPR003660|IPR003661|IPR004358|IPR007891|IPR013655 CHASE3|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0005515|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF05227|PF08447|PR00344|PTHR24423|SM00086|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS14830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PS00675|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS14835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR004358|IPR011712 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0016021|GO:0016310|GO:0016772|GO:0046983 G3DSA:3.30.565.10|PF02518|PF07730|PR00344|PTHR24421|SM00387|SSF55874 NIDE_RS14840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF583|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS14845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|SSF56954 NIDE_RS14850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF4|SSF111369|TIGR01730 NIDE_RS14855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF24|SSF82693|SSF82714|SSF82866|TIGR00914 NIDE_RS14860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000390 Small multidrug resistance protein family GO:0016021 PF00893|PTHR30561|PTHR30561:SF0|SSF103481 NIDE_RS14865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 PF01699|PTHR37958|PTHR37958:SF1 NIDE_RS14870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR003593|IPR009057|IPR011006|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS14875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006656|IPR009010|IPR019546 Aspartate decarboxylase-like domain|Molybdopterin oxidoreductase|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0016491|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF10518|PTHR11615|PTHR11615:SF167|SSF50692|SSF53706 NIDE_RS14880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF13247|PTHR11938|PTHR11938:SF8|SSF54862 NIDE_RS14885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR30546|PTHR30546:SF0|SSF52218 NIDE_RS14895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003795 Protein of unknown function DUF192 PF02643|PTHR37953|PTHR37953:SF1 NIDE_RS14900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000595|IPR006685|IPR010920|IPR011066|IPR014710|IPR018488|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|RmlC-like jelly roll fold GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:2.60.120.10|G3DSA:3.30.70.100|PF00027|PF00924|PR00103|PS00888|PS00889|PTHR30347|SM00100|SSF50182|SSF51206|SSF82689 NIDE_RS14905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0008152|GO:0015969|GO:0016597 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|PTHR21262|PTHR21262:SF0|SM00471|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 NIDE_RS14910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001667|IPR003156|IPR004610 Bacterial RecJ exonuclease|DDH domain|DHHA1 domain GO:0003676|GO:0006281|GO:0006310|GO:0008409 PF01368|PF02272|PTHR30255|PTHR30255:SF2|SSF64182|TIGR00644 NIDE_RS14915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008515 Ubiquitin-like, Pup PF05639|TIGR03687 NIDE_RS14920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 MF_01129|PF03030|PIRSF001265|PTHR31998|PTHR31998:SF0|TIGR01104 NIDE_RS14930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011031|IPR023155 Cytochrome c-552/4|Multihaem cytochrome G3DSA:1.10.710.10|PF13435|SSF48695 NIDE_RS14935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011031|IPR023155 Cytochrome c-552/4|Multihaem cytochrome G3DSA:1.10.710.10|PF13435|SSF48695 NIDE_RS14940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001478 PDZ domain GO:0005515 G3DSA:2.30.42.10|SSF50156 NIDE_RS14945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 PF09459 NIDE_RS14950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000033|IPR001258|IPR011042 LDLR class B repeat|NHL repeat|Six-bladed beta-propeller, TolB-like GO:0005515 G3DSA:2.120.10.30|PF01436|PTHR24103|PTHR24103:SF378|SM00135|SSF63829 NIDE_RS14955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003369|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MF_00236|PF02416|PTHR33162|TIGR01411 NIDE_RS14960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13424|PF13432|PTHR23083|SM00028|SSF48452 NIDE_RS14970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006158|IPR006638|IPR007197|IPR023404|IPR023970 Cobalamin (vitamin B12)-binding domain|Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.80.30.20|PF02310|PF04055|PTHR11918|PTHR11918:SF64|SM00729|SSF102114|SSF52242 NIDE_RS14975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 PF09459|SM00887 NIDE_RS14995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001680|IPR015943|IPR017986|IPR019775|IPR020472 G-protein beta WD-40 repeat|WD40 repeat|WD40 repeat, conserved site|WD40-repeat-containing domain|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF00400|PR00320|PS00678|PTHR22847|SM00320|SSF50978 NIDE_RS15000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS15005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR003594|IPR003660|IPR003661|IPR004358|IPR013656|IPR013767|IPR033479 Double Cache domain 1|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0006355|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00672|PF00989|PF02518|PF02743|PF08448|PR00344|PTHR24423|PTHR24423:SF445|SM00086|SM00091|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS15010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005665|IPR022645|IPR022646|IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01464_B|PF02355|PF07549|PR01755|PTHR30081|SSF82866|TIGR00916|TIGR00966 NIDE_RS15015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR005791|IPR022645|IPR022646|IPR022813 Acriflavin resistance protein|Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site GO:0005215|GO:0006810|GO:0006886|GO:0015450|GO:0016020 G3DSA:1.20.1640.10|MF_01463_B|PF02355|PF07549|PR00702|PTHR30081|PTHR30081:SF1|SSF82866|TIGR00916|TIGR01129 NIDE_RS15020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003849 Preprotein translocase YajC PF02699|PR01853|PTHR33909|PTHR33909:SF1|SM01323|TIGR00739 NIDE_RS15025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002616|IPR004803 Queuine tRNA-ribosyltransferase|tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008033|GO:0008479|GO:0008616 G3DSA:3.20.20.105|MF_00168|PF01702|PTHR21148|PTHR21148:SF26|SSF51713|TIGR00430|TIGR00449 NIDE_RS15030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|PTHR11956|PTHR11956:SF6|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456 NIDE_RS15040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013482|IPR025877|IPR029044 MobA-like NTP transferase|Molybdenum cofactor guanylyltransferase|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0006777 G3DSA:3.90.550.10|MF_00316|PF12804|PTHR19136|PTHR19136:SF81|SSF53448 NIDE_RS15045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS15050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS15055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 NIDE_RS15060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654 NIDE_RS15065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS15070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS15080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021409 Protein of unknown function DUF3047 PF11249 NIDE_RS15085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654 NIDE_RS15095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal GO:0015979|GO:0015995|GO:0016491|GO:0055114 PF08369 NIDE_RS15100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007352 Protein of unknown function DUF420 PF04238 NIDE_RS15105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001077|IPR011991|IPR016461|IPR029063|IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain|O-methyltransferase COMT-type|O-methyltransferase, family 2|S-adenosyl-L-methionine-dependent methyltransferase|Winged helix-turn-helix DNA-binding domain GO:0008168|GO:0008171 G3DSA:1.10.10.10|G3DSA:3.40.50.150|PF00891|PF16864|PIRSF005739|PTHR11746|PTHR11746:SF63|SSF46785|SSF53335 NIDE_RS15115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000357|IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|HEAT repeat|PBS lyase HEAT-like repeat GO:0005488|GO:0005515 G3DSA:1.25.10.10|PF02985|PF13646|PTHR12697|PTHR12697:SF18|SM00567|SSF48371 NIDE_RS15125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013784|IPR014766|IPR029413 Carbohydrate-binding-like fold|Carboxypeptidase, regulatory domain|Rhamnogalacturonan lyase, domain II GO:0030246 G3DSA:2.60.40.1120|PF14686|SSF49452 NIDE_RS15130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013784|IPR014766 Carbohydrate-binding-like fold|Carboxypeptidase, regulatory domain GO:0030246 G3DSA:2.60.40.1120|SSF49452 NIDE_RS15135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002355|IPR008972|IPR011707 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 3 GO:0005507 G3DSA:2.60.40.420|PF07732|PS00080|SSF49503 NIDE_RS15140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PF13520|PTHR11785|PTHR11785:SF125 NIDE_RS15145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000601 PKD domain G3DSA:2.60.40.1080|G3DSA:2.60.40.670|SSF49299 NIDE_RS15150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR026337 HEXXH motif domain TIGR04267 NIDE_RS15160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008532 Domain of unknown function DUF814 G3DSA:2.30.310.10|PF05670|PF05833|PTHR15239|PTHR15239:SF1 NIDE_RS15175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30489 NIDE_RS15180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF86|SM00382|SSF52540 NIDE_RS15185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:2.40.50.100|PF16576|PTHR32347|PTHR32347:SF16|SSF111369 NIDE_RS15190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|PTHR30203|PTHR30203:SF3|SSF56954|TIGR01845 NIDE_RS15205 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000504|IPR012677 Nucleotide-binding alpha-beta plait domain|RNA recognition motif domain GO:0000166|GO:0003676 G3DSA:3.30.70.330|PF00076|PTHR24012|SM00360|SSF54928 NIDE_RS15210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001451|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like GO:0016740 G3DSA:2.160.10.10|PF00132|PS00101|PTHR23416|PTHR23416:SF55|SSF51161 NIDE_RS15215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004274|IPR010033|IPR010037|IPR011990|IPR016181|IPR023214 Acyl-CoA N-acyltransferase|FCP1 homology domain|FkbH domain|HAD-like domain|HAD-superfamily phosphatase, subfamily IIIC|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.1000|G3DSA:3.40.630.30|PF03031|SSF55729|SSF56784|TIGR01681|TIGR01686 NIDE_RS15220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR002539|IPR016040|IPR029069 HotDog domain|MaoC-like domain|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.10.129.10|G3DSA:3.40.50.720|PF00106|PF01575|PR00081|PTHR13078|SSF51735|SSF54637 NIDE_RS15225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 NIDE_RS15230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF117|SM00382|SSF52540 NIDE_RS15235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF01381|PF07883|PTHR10245|PTHR10245:SF53|SM00530|SSF47413|SSF51182 NIDE_RS15240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 PF13661|SM00702 NIDE_RS15245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PIRSF006648 NIDE_RS15255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 NIDE_RS15260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005126|IPR011031 Multihaem cytochrome|NapC/NirT cytochrome c, N-terminal G3DSA:1.10.3820.10|PF03264|SSF48695 NIDE_RS15265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004435|IPR027417 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525|GO:0006777 G3DSA:3.40.50.300|PF03205|PTHR40072|PTHR40072:SF2|SSF52540|TIGR00176 NIDE_RS15270 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001453|IPR005110|IPR005111 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PTHR10192|SM00852|SSF53218|SSF63867|SSF63882|TIGR00177 NIDE_RS15275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019591|IPR027417 Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|MF_02040|PF10609|PTHR23264|SSF52540 NIDE_RS15280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MF_00902|PF00902|PR01840|PTHR30371|PTHR30371:SF0|TIGR00945 NIDE_RS15285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF93|SM00228|SSF50156|SSF50494|TIGR02037 NIDE_RS15295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF91|SSF53448 NIDE_RS15305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003696|IPR031730 Carbamoyltransferase|Carbamoyltransferase, C-terminal GO:0003824|GO:0009058 PF02543|PF16861|PTHR34847|SSF53067 NIDE_RS15310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018247 EF-Hand 1, calcium-binding site PS00018 NIDE_RS15315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS15320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010982|IPR025194 Domain of unknown function DUF4115|Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|PF13413|PF13464|PTHR34475|PTHR34475:SF1 NIDE_RS15325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001440|IPR011990|IPR013105|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide repeat 2|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF07719|PF13181|PTHR23083|SM00028|SSF48452 NIDE_RS15330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00584|PTHR10584|PTHR10584:SF179|SSF53613 NIDE_RS15335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000845|IPR001369|IPR010044|IPR018099 Methylthioadenosine phosphorylase (MTAP)|Nucleoside phosphorylase domain|PNP/MTAP phosphorylase|Purine phosphorylase, family 2, conserved site GO:0003824|GO:0009116|GO:0016763|GO:0017061 G3DSA:3.40.50.1580|MF_01963|PF01048|PS01240|PTHR11904|PTHR11904:SF1|SSF53167|TIGR01694 NIDE_RS15340 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|PTHR11088|SSF52540|TIGR00174 NIDE_RS15345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002099|IPR003594|IPR013507|IPR014721|IPR014762|IPR014790|IPR020568|IPR020667 DNA mismatch repair protein family|DNA mismatch repair protein, C-terminal|DNA mismatch repair protein, MutL|DNA mismatch repair, conserved site|Histidine kinase-like ATPase, C-terminal domain|MutL, C-terminal, dimerisation|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0006298|GO:0030983 G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00149|PF01119|PF08676|PF13589|PS00058|PTHR10073|SM00853|SM01340|SSF118116|SSF54211|SSF55874|TIGR00585 NIDE_RS15365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007195|IPR011659|IPR014167|IPR015943 Tol-Pal system beta propeller repeat-containing protein, TolB|TolB, N-terminal|WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0015031|GO:0017038|GO:0042597 G3DSA:2.130.10.10|G3DSA:3.40.50.10070|MF_00671|PF04052|PF07676|PTHR11731|PTHR11731:SF123|SSF52964|SSF69304|TIGR02800 NIDE_RS15375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF3 NIDE_RS15380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625 NIDE_RS15395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002104|IPR004107|IPR011010|IPR011932|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD|Tyrosine recombinase XerD GO:0003677|GO:0006310|GO:0009009|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF5|SSF56349|TIGR02225 NIDE_RS15400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000709|IPR011990|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I|Tetratricopeptide-like helical domain GO:0005515|GO:0006865 G3DSA:1.25.40.10|G3DSA:3.40.50.2300|PF13432|PF13458|PTHR30483|PTHR30483:SF6|SSF48452|SSF53822 NIDE_RS15405 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002305|IPR002306|IPR014729 Aminoacyl-tRNA synthetase, class Ic|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|PF00579|PR01039|PTHR10055|PTHR10055:SF6|SSF52374|TIGR00233 NIDE_RS15410 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 NIDE_RS15415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003729 Bifunctional nuclease domain GO:0004518 PF02577|PTHR15160|SSF103256 NIDE_RS15420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF8|SM00849|SSF56281 NIDE_RS15435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS15465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018700 Protein of unknown function DUF2204 PF09970|SSF81301 NIDE_RS15470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006005|IPR009051|IPR016040|IPR023753|IPR028261 Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|Glutamate synthase, NADH/NADPH, small subunit 1|NAD(P)-binding domain GO:0006537|GO:0016491|GO:0016639|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF07992|PF14691|PR00419|PTHR11938|PTHR11938:SF75|SSF46548|SSF51971|TIGR01317 NIDE_RS15475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002489|IPR002932|IPR006982|IPR013785|IPR017932|IPR029055 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase, alpha subunit, C-terminal|Glutamate synthase, central-N|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal GO:0003824|GO:0006537|GO:0006807|GO:0008152|GO:0015930|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.160.20.60|G3DSA:3.20.20.70|G3DSA:3.60.20.10|PF00310|PF01493|PF01645|PF04898|PTHR11938|PTHR11938:SF1|SSF51395|SSF56235|SSF69336 NIDE_RS15480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00723|PTHR12001|PTHR12001:SF47|SSF48576 NIDE_RS15485 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008323 Uncharacterised conserved protein UCP033563 PF06245|PIRSF033563|PTHR36454|PTHR36454:SF1 NIDE_RS15490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS15495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR22572|SSF53448 NIDE_RS15500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.30.200.20|G3DSA:3.90.1200.10|PF01636|PTHR33540|PTHR33540:SF1|SSF56112 NIDE_RS15505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001395|IPR023210 Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|PTHR11732|SSF51430 NIDE_RS15510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006976 VanZ-like PF04892 NIDE_RS15515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004300|IPR011330|IPR027291 Glycoside hydrolase 38/57, N-terminal domain|Glycoside hydrolase family 57, N-terminal domain|Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 G3DSA:3.20.110.10|PF03065|PTHR36306|PTHR36306:SF1|SSF88713 NIDE_RS15520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001937|IPR005849|IPR005850|IPR011146 Galactose-1-phosphate uridyl transferase, C-terminal|Galactose-1-phosphate uridyl transferase, N-terminal|Galactose-1-phosphate uridyl transferase, class I|HIT-like domain GO:0003824|GO:0006012|GO:0008108|GO:0008270 G3DSA:3.30.428.10|PF01087|PF02744|PIRSF000808|PTHR11943|PTHR11943:SF4|SSF54197|TIGR00209 NIDE_RS15525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003749|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|SSF54285 NIDE_RS15530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011063|IPR012089|IPR014729 2-thiocytidine tRNA biosynthesis protein, TtcA|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0008033 G3DSA:3.40.50.620|PF01171|PIRSF004976|PTHR11807|PTHR11807:SF3|SSF52402 NIDE_RS15540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF01547|PTHR30061|PTHR30061:SF14|SSF53850 NIDE_RS15545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30406|PTHR30406:SF2|SSF161098 NIDE_RS15550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR32243|PTHR32243:SF18|SSF161098 NIDE_RS15555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PTHR24220|PTHR24220:SF151|SM00382|SSF50331|SSF52540 NIDE_RS15560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001623|IPR002939|IPR008971|IPR012724|IPR018253 Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding GO:0005524|GO:0006457|GO:0009408|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.60.260.20|MF_01152|PF00226|PF01556|PR00625|PS00636|PTHR24078|PTHR24078:SF190|SM00271|SSF46565|SSF49493 NIDE_RS15565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|PTHR33508|PTHR33508:SF1|TIGR00427 NIDE_RS15580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|PTHR21000|PTHR21000:SF5|SSF143975|SSF52016|TIGR00110 NIDE_RS15590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003414|IPR024953|IPR025198|IPR025200 Polyphosphate kinase|Polyphosphate kinase C-terminal domain|Polyphosphate kinase N-terminal domain|Polyphosphate kinase middle domain GO:0006799|GO:0008976|GO:0009358 G3DSA:3.30.1840.10|G3DSA:3.30.870.10|MF_00347|PF02503|PF13089|PF13090|PIRSF015589|PTHR30218|PTHR30218:SF0|SSF140356|SSF143724|SSF56024|TIGR03705 NIDE_RS15610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002151|IPR011990|IPR019734 Kinesin light chain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0003777|GO:0005515|GO:0005871 G3DSA:1.25.40.10|PF13374|PF13424|PR00381|PTHR19959|SM00028|SSF48452 NIDE_RS15615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000683|IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Oxidoreductase, N-terminal GO:0003824|GO:0016491|GO:0050662 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01370|PF01408|PTHR22604|SSF51735 NIDE_RS15620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001789|IPR011006|IPR013767 CheY-like superfamily|PAS domain|PAS fold|Signal transduction response regulator, receiver domain GO:0000160|GO:0006355 G3DSA:3.30.450.20|G3DSA:3.40.50.2300|PF00072|PF00989|PTHR26402|SM00091|SM00448|SSF52172|SSF55785|TIGR00229 NIDE_RS15625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR003594|IPR011495|IPR013655 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF02518|PF07568|PF08447|PF13426|PTHR24423|PTHR24423:SF468|SM00086|SM00091|SM00387|SSF55785|SSF55874|TIGR00229 NIDE_RS15630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF15|SSF53383 NIDE_RS15640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PTHR10742|PTHR10742:SF271|SSF51905 NIDE_RS15645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 PF00953|PTHR22926|PTHR22926:SF3 NIDE_RS15650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:3.40.50.2000|PF13692|PTHR12526|SSF53756 NIDE_RS15655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 NIDE_RS15660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF15|SSF53448 NIDE_RS15665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001174|IPR006204|IPR013750|IPR014606|IPR014721|IPR020568 D,D-heptose 7-phosphate kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Galactokinase/homoserine kinase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0008152|GO:0016301 G3DSA:3.30.230.10|G3DSA:3.30.70.890|PF00288|PF08544|PIRSF036406|PR00960|PTHR32463|SSF54211|SSF55060 NIDE_RS15670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|SSF53335 NIDE_RS15675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 NIDE_RS15680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008884|IPR029063 Macrocin-O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF05711|PTHR40036|PTHR40036:SF1|SSF53335 NIDE_RS15685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008884 Macrocin-O-methyltransferase PF05711 NIDE_RS15695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 NIDE_RS15700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR029439 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Wzt, C-terminal GO:0005524|GO:0016887 G3DSA:2.70.50.60|G3DSA:3.40.50.300|PF00005|PF14524|PS00211|PTHR24220|PTHR24220:SF117|SM00382|SSF52540 NIDE_RS15705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PTHR30413|PTHR30413:SF8 NIDE_RS15710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032688 ABC-2 family transporter protein GO:0006810 PF12679 NIDE_RS15715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF160|SM00382|SSF52540 NIDE_RS15725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007016|IPR011990 O-antigen ligase-related|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF04932|PTHR23083|SSF48452 NIDE_RS15740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006597|IPR011990|IPR019734 Sel1-like repeat|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PF14559|PTHR23083|SM00028|SM00671|SSF48452 NIDE_RS15745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR007692|IPR007693|IPR007694|IPR016136|IPR027417 AAA+ ATPase domain|DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|PTHR30153|SM00382|SSF48024|SSF52540|TIGR00665 NIDE_RS15750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004516|IPR004517 ATP phosphoribosyltransferase regulatory subunit|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 G3DSA:3.30.930.10|MF_00125|PF13393|PIRSF001549|PTHR11476|PTHR11476:SF5|SSF55681|TIGR00443 NIDE_RS15755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002912|IPR006139|IPR006140|IPR006236|IPR016040|IPR029009|IPR029752|IPR029753 ACT domain|Allosteric substrate binding domain|D-3-phosphoglycerate dehydrogenase|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0004617|GO:0006564|GO:0008152|GO:0016597|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.30.1330.90|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF01842|PF02826|PS00065|PS00670|PTHR10996|PTHR10996:SF20|SSF143548|SSF51735|SSF52283|SSF55021|TIGR01327 NIDE_RS15760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR024169 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|PS00595|PTHR21152|PTHR21152:SF21|SSF53383 NIDE_RS15765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008258|IPR018392|IPR023346 LysM domain|Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|G3DSA:3.10.350.10|PF01464|PF01476|PTHR21666|PTHR21666:SF219|SM00257|SSF53955|SSF54106 NIDE_RS15770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13525|SSF48452 NIDE_RS15775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004723|IPR004839|IPR015421|IPR015422|IPR015424 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type|Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008710|GO:0009058|GO:0009102|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR13693|PTHR13693:SF53|SSF53383|TIGR00858 NIDE_RS15780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001482|IPR003593|IPR006321|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Pilus retraction protein PilT|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.40.50.300|PF00437|PS00662|PTHR30486|PTHR30486:SF6|SM00382|SSF52540|TIGR01420 NIDE_RS15785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001482|IPR006321|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Pilus retraction protein PilT|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.40.50.300|PF00437|PS00662|PTHR30486|PTHR30486:SF3|SSF52540|TIGR01420 NIDE_RS15790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 NIDE_RS15795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS15805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001343|IPR003995|IPR010566|IPR011049|IPR018511|IPR029058 Alpha/Beta hydrolase fold|Haemolysin-type calcium binding-related|Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|RTX toxin determinant A|Serralysin-like metalloprotease, C-terminal GO:0005509|GO:0005576|GO:0009405 G3DSA:2.150.10.10|G3DSA:3.40.50.1820|PF00353|PF06594|PR00313|PR01488|PS00330|SSF51120|SSF53474 NIDE_RS15815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003997|IPR006144|IPR010129 RTX secretion protein D, Gram-negative bacteria|Secretion protein HlyD, conserved site|Type I secretion membrane fusion protein, HlyD family GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|PS00543|PTHR30386|PTHR30386:SF4|SSF111369|TIGR01843 NIDE_RS15820 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR005074|IPR010132|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, HlyB|P-loop containing nucleoside triphosphate hydrolase|Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0006810|GO:0008233|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PF03412|PS00211|PTHR24221|PTHR24221:SF246|SM00382|SSF52540|SSF90123|TIGR01846 NIDE_RS15835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000566|IPR002446|IPR011038|IPR012674|IPR022271|IPR022272 Calycin|Calycin-like|Lipocalin family conserved site|Lipocalin, ApoD type|Lipocalin, bacterial|Lipocalin/cytosolic fatty-acid binding domain GO:0005215 G3DSA:2.40.128.20|PF08212|PIRSF036893|PR01171|PS00213|PTHR10612|SSF50814 NIDE_RS15840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR32071|PTHR32071:SF37|SM00448|SSF52172 NIDE_RS15855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004193|IPR006047|IPR006048|IPR006407|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 1,4-alpha-glucan-branching enzyme, GlgB|Alpha-amylase/branching enzyme, C-terminal all beta|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0003844|GO:0004553|GO:0005975|GO:0005978|GO:0043169 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|MF_00685|PF00128|PF02806|PF02922|PIRSF000463|PTHR10357|PTHR10357:SF160|SM00642|SSF51011|SSF51445|SSF81296|TIGR01515 NIDE_RS15870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018712 Domain of unknown function DUF2235 PF09994|PTHR33840 NIDE_RS15890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|PTHR30203|PTHR30203:SF3|SSF56954|TIGR01845 NIDE_RS15895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF11|SSF82693|SSF82714|SSF82866|TIGR00915 NIDE_RS15900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13533|PTHR30158|PTHR30158:SF3|SSF111369|TIGR01730 NIDE_RS15910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011473 Protein of unknown function DUF1579 PF07617 NIDE_RS15915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|PTHR35174|PTHR35174:SF1|SSF54909 NIDE_RS15920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009725|IPR028973|IPR029068 3-demethylubiquinone-9 3-methyltransferase|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Predicted 3-demethylubiquinone-9 3-methyltransferase G3DSA:3.10.180.10|PF06983|PIRSF021700|PTHR33990|PTHR33990:SF2|SSF54593 NIDE_RS15925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012675 Beta-grasp domain G3DSA:3.10.20.30 NIDE_RS15930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002860|IPR015943 BNR repeat|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF02012|SSF110296 NIDE_RS15935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|PTHR35174|PTHR35174:SF3|SSF54909 NIDE_RS15940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|PTHR35174|PTHR35174:SF3|SSF54909 NIDE_RS15945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PTHR33993|SSF54593 NIDE_RS15950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 NIDE_RS15955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007627|IPR011990|IPR011991|IPR013249|IPR013324|IPR013325 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 region 2|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005515|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|G3DSA:1.25.40.10|PF04542|PF08281|PTHR30173|PTHR30173:SF7|SSF48452|SSF88659|SSF88946 NIDE_RS15960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002744 Domain of unknown function DUF59 PF01883|PTHR13696|PTHR13696:SF62|SSF117916 NIDE_RS15970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012312 Haemerythrin-like G3DSA:1.20.120.520|PF01814 NIDE_RS15975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|PTHR30203|PTHR30203:SF14|SSF56954|TIGR01845 NIDE_RS15985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF14|SSF82693|SSF82714|SSF82866 NIDE_RS15990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF11|SSF111369|TIGR01730 NIDE_RS15995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029024 TerB-like G3DSA:1.10.3680.10|SSF158682 NIDE_RS16000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001763|IPR032816|IPR032818 DedA family|Rhodanese-like domain|SNARE associated Golgi protein G3DSA:3.40.250.10|PF00581|PF09335|PTHR30353|PTHR30353:SF6|SM00450|SSF52821 NIDE_RS16010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417|IPR029016 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|GAF domain|GAF domain-like|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.40|G3DSA:3.40.50.300|PF00158|PF01590|PF02954|PF13185|PF13492|PS00675|PS00676|PS00688|PTHR32071|SM00065|SM00382|SSF46689|SSF52540|SSF55781 NIDE_RS16020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007156|IPR023353 LemA|LemA-like domain G3DSA:1.20.1440.20|PF04011|PTHR34478|PTHR34478:SF1|SSF140478 NIDE_RS16025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018702 Protein of unknown function DUF2207, membrane PF09972 NIDE_RS16030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008928|IPR012341 Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|SSF48208 NIDE_RS16040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011576|IPR012349 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|PTHR39336|PTHR39336:SF2|SSF50475 NIDE_RS16045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR031849 Domain of unknown function DUF5069 PF16798 NIDE_RS16050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|PTHR13256:SF10|SSF55729 NIDE_RS16070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002355|IPR008972|IPR011706 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF07731|PS00080|PTHR11709|PTHR11709:SF2|SSF49503 NIDE_RS16075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004852|IPR009056 Cytochrome c-like domain|Di-haem cytochrome c peroxidase GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|PF03150|PTHR30600|PTHR30600:SF7|SSF46626 NIDE_RS16080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001395|IPR023210 Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|PTHR11732|SSF51430 NIDE_RS16085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|SSF56784 NIDE_RS16090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005593|IPR018969|IPR018970|IPR019789|IPR019790|IPR023962|IPR029061 Probable phosphoketolase|Thiamin diphosphate-binding fold|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 G3DSA:3.40.50.970|MF_01403|PF03894|PF09363|PF09364|PIRSF017245|PS60002|PS60003|PTHR31273|PTHR31273:SF0|SSF52518 NIDE_RS16095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|PTHR21060|PTHR21060:SF11|SSF53067|TIGR00016 NIDE_RS16105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001853|IPR012336 DSBA-like thioredoxin domain|Thioredoxin-like fold GO:0015035 G3DSA:3.40.30.10|PF01323|PTHR13887|PTHR13887:SF25|SSF52833 NIDE_RS16110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002355|IPR008972|IPR011707 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 3 GO:0005507 G3DSA:2.60.40.420|PF07732|PS00080|SSF49503 NIDE_RS16115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PS00675|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS16120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR033479 Double Cache domain 1|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF02743|PR00344|PTHR24423|PTHR24423:SF497|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 NIDE_RS16125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005625 PepSY-associated TM protein PF03929 NIDE_RS16130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019613 Protein of unknown function DUF4198 PF10670|SSF49478 NIDE_RS16135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000531|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07660|PF07715|PTHR32552|SM00965|SSF56935 NIDE_RS16140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006860|IPR012373|IPR032508|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal|Protein FecR, C-terminal PF04773|PF16220|PF16344|PIRSF018266|PTHR30273|PTHR30273:SF2 NIDE_RS16145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 NIDE_RS16150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF34|SSF82693|SSF82714|SSF82866 NIDE_RS16155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF21|SSF82693|SSF82714|SSF82866 NIDE_RS16160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR022824|IPR032317 Multidrug resistance protein MdtA|RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF12|SSF111369|TIGR01730 NIDE_RS16165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|PTHR30346:SF3|SSF46785|SSF53850 NIDE_RS16170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005302|IPR005303|IPR011037|IPR015808 MOSC, N-terminal beta barrel|Molybdenum cofactor sulfurase, C-terminal|Molybdenum cofactor sulfurase, C-terminal-like|Pyruvate kinase-like, insert domain GO:0003824|GO:0030151|GO:0030170 G3DSA:2.40.33.20|PF03473|PF03476|PTHR14237|SSF50800 NIDE_RS16175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005163|IPR005302|IPR011037|IPR015808 3-alpha domain|Molybdenum cofactor sulfurase, C-terminal|Molybdenum cofactor sulfurase, C-terminal-like|Pyruvate kinase-like, insert domain GO:0003824|GO:0030151|GO:0030170 G3DSA:2.40.33.20|PF03473|PF03475|PTHR30212|PTHR30212:SF2|SSF50800 NIDE_RS16190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS16195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001497|IPR004026|IPR008332|IPR009057|IPR011991|IPR014048|IPR016221|IPR018060 Ada DNA repair, metal-binding|Bifunctional regulatory protein Ada|DNA binding HTH domain, AraC-type|Homeodomain-like|Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0003824|GO:0003908|GO:0006281|GO:0006355|GO:0008168|GO:0008270|GO:0043565 G3DSA:1.10.10.10|G3DSA:1.10.10.60|G3DSA:3.30.160.70|G3DSA:3.40.10.10|PF01035|PF02805|PF12833|PIRSF000409|PS00374|PTHR10815|PTHR10815:SF9|SM00342|SSF46689|SSF46767|SSF53155|SSF57884|TIGR00589 NIDE_RS16210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 G3DSA:3.40.50.1810|SSF52309 NIDE_RS16225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009061|IPR010093|IPR011991 Putative DNA-binding domain|SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|SSF46955|TIGR01764 NIDE_RS16230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF14659|PTHR30349|PTHR30349:SF20|SSF56349 NIDE_RS16240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:1.10.300.10|G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|PTHR11846|SM00788|SSF52540|TIGR00184 NIDE_RS16250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524|IPR032781 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PF16326|PS00211|PTHR19211|SM00382|SSF52540 NIDE_RS16255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 NIDE_RS16260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR008824|IPR008921|IPR021886|IPR027417|IPR032423 AAA ATPase, C-terminal domain|AAA+ ATPase domain|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0006260|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.3710.10|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF05496|PF12002|PF16193|PTHR13779|PTHR13779:SF7|SM00382|SSF48019|SSF52540 NIDE_RS16265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|PTHR10992|SSF53474 NIDE_RS16270 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001474|IPR018234|IPR020602 GTP cyclohydrolase I|GTP cyclohydrolase I domain|GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 G3DSA:1.10.286.10|G3DSA:3.30.1130.10|MF_00223|PF01227|PS00859|PS00860|PTHR11109|SSF55620|TIGR00063 NIDE_RS16275 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007115|IPR022470 6-pyruvoyl tetrahydropterin synthase, cysteine active site|6-pyruvoyl tetrahydropterin synthase/QueD family protein GO:0003874|GO:0006729 G3DSA:3.30.479.10|PF01242|PS00987|PTHR12589|PTHR12589:SF1|SSF55620 NIDE_RS16280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000361|IPR016092|IPR017870 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|PF01521|PS01152|PTHR10072|SSF89360|TIGR00049 NIDE_RS16285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001041|IPR001055|IPR012675 2Fe-2S ferredoxin-type iron-sulfur binding domain|Adrenodoxin|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PR00355|PTHR23426|SSF54292 NIDE_RS16290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001949|IPR011538|IPR019554|IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Soluble ligand binding domain GO:0008137|GO:0010181|GO:0051539|GO:0055114 PF01512|PF10531|PF10589|PS00645|PTHR11780|PTHR11780:SF10|SM00928|SSF140490|SSF142019|SSF142984 NIDE_RS16295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010389 Domain of unknown function DUF989 PF06181 NIDE_RS16300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001236|IPR001557|IPR011275|IPR015955|IPR016040|IPR022383 L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|Malate dehydrogenase, type 3|NAD(P)-binding domain GO:0003824|GO:0005975|GO:0016491|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|MF_00487|PF00056|PF02866|PIRSF000102|PR00086|PTHR11540|PTHR11540:SF16|SSF51735|SSF56327|TIGR01763 NIDE_RS16310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|PTHR41248|PTHR41248:SF1|SM00327|SSF53300 NIDE_RS16315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 G3DSA:3.90.460.10|PF02943|PTHR35113|PTHR35113:SF1|SSF57662 NIDE_RS16320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007484 Peptidase M28 G3DSA:3.40.630.10|PF04389|PTHR12147|SSF53187 NIDE_RS16330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003746|IPR005228 Conserved hypothetical protein CHP00251|Protein of unknown function DUF167 G3DSA:3.30.1200.10|MF_00634|PF02594|PTHR13420|SM01152|SSF69786|TIGR00251 NIDE_RS16335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011704|IPR013615|IPR027417 ATPase, dynein-related, AAA domain|CbbQ/NirQ/NorQ, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|PF08406|PTHR22908|SSF52540 NIDE_RS16355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004045|IPR012336 Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:3.40.30.10|PF13417|SSF52833 NIDE_RS16360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003739|IPR006638|IPR007197|IPR013785|IPR025895 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Lysine-2,3-aminomutase, C-terminal domain|Lysine-2,3-aminomutase/glutamate 2,3-aminomutase|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF12544|PIRSF004911|PTHR30538|PTHR30538:SF1|SM00729|SSF102114|TIGR00238 NIDE_RS16365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010550|IPR029054 Deoxycytidine triphosphate deaminase, bacterial|dUTPase-like GO:0008829|GO:0009394 G3DSA:2.70.40.10|PF06559|PTHR11241|PTHR11241:SF1|SSF51283 NIDE_RS16375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR026461|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases|Transferase 2, rSAM/selenodomain-associated G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF92|SSF53448|TIGR04283 NIDE_RS16380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018641|IPR029044 Nucleotide-diphospho-sugar transferases|Transferase 1, rSAM/selenodomain-associated G3DSA:3.90.550.10|PF09837|PTHR36529|SSF53448|TIGR04282 NIDE_RS16385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|PTHR24322:SF211|SM00822|SSF51735 NIDE_RS16390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000537|IPR023214 HAD-like domain|UbiA prenyltransferase family GO:0004659|GO:0016021 G3DSA:3.40.50.1000|PF01040|PF12710|PTHR11048|PTHR11048:SF5|SSF56784 NIDE_RS16395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002109|IPR004480|IPR012336 Glutaredoxin|Monothiol glutaredoxin-related|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PTHR10293|PTHR10293:SF44|SSF52833 NIDE_RS16400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002634 BolA protein G3DSA:3.30.300.90|PF01722|PTHR12735|PTHR12735:SF3|SSF82657 NIDE_RS16410 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS16420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR003594|IPR003660|IPR003661|IPR004358|IPR013767|IPR033479 Double Cache domain 1|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0006355|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00672|PF00989|PF02518|PF02743|PR00344|PTHR24423|SM00091|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55785|SSF55874 NIDE_RS16425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021796 Protein of unknown function DUF3365 PF11845 NIDE_RS16430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716|PTHR21716:SF13 NIDE_RS16435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007607 Protein of unknown function DUF583 PF04519|PTHR35024 NIDE_RS16440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001264|IPR001460|IPR012338|IPR023346|IPR028166 Beta-lactamase/transpeptidase-like|Bifunctional transglycosylase second domain|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.30.2060.10|G3DSA:3.40.710.10|PF00905|PF00912|PF14814|PTHR32282|PTHR32282:SF5|SSF53955|SSF56601|TIGR02074 NIDE_RS16445 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) G3DSA:2.40.160.60|PF03349|PTHR35093|SSF56935 NIDE_RS16460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PTHR11819|PTHR11819:SF141 NIDE_RS16475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008030|IPR016040 NAD(P)-binding domain|NmrA-like domain G3DSA:3.40.50.720|PF05368|PTHR14194|PTHR14194:SF46|SSF51735 NIDE_RS16490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004045|IPR010987|IPR012336|IPR016639 Glutathione S-transferase (GST)|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13409|PF13410|PIRSF015753|PTHR32419|PTHR32419:SF6|SSF47616|SSF52833 NIDE_RS16495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000774|IPR001179|IPR023566 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 G3DSA:1.10.287.460|G3DSA:3.10.50.40|PF00254|PF01346|PTHR10516|SSF54534 NIDE_RS16500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR003594|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF13581|PTHR26402|SM00448|SSF52172 NIDE_RS16505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013529|IPR013781|IPR017853|IPR032267 Domain of unknown function DUF4832|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 G3DSA:3.20.20.80|PF02449|PF16116|SSF51445 NIDE_RS16510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF397|SM00822|SSF51735 NIDE_RS16530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007433 Protein of unknown function DUF481 PF04338 NIDE_RS16535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004792|IPR023753 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.50.50.60|PF03486|PR00368|PR00411|PTHR10617|PTHR10617:SF103|SSF160996|SSF51905|TIGR00275 NIDE_RS16540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PTHR23088|SSF56317 NIDE_RS16545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010662|IPR029058 Alpha/Beta hydrolase fold|Putative hydrolase RBBP9/YdeN GO:0016787 G3DSA:3.40.50.1820|PF06821|SSF53474 NIDE_RS16550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004792|IPR022460|IPR023753 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like|Conserved hyptotheical protein CHP03862, flavoprotein, PP4765|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF03486|PTHR10617|PTHR10617:SF103|SSF160996|SSF51905|TIGR00275|TIGR03862 NIDE_RS16560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 NIDE_RS16565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|SSF56925 NIDE_RS16570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004705|IPR006153|IPR018422 Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family|Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999|PTHR10110|PTHR10110:SF86|TIGR00831 NIDE_RS16575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001395|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|PTHR11732:SF198|SSF51430 NIDE_RS16585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 NIDE_RS16595 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold GO:0005488 G3DSA:1.25.10.10|PTHR39167|SSF48371 NIDE_RS16600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 G3DSA:3.30.780.10|PF01253|PTHR12789|SSF55159 NIDE_RS16605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009822|IPR011335 Restriction endonuclease type II-like|YaeQ G3DSA:3.10.640.10|PF07152|PIRSF011484|PTHR38784|PTHR38784:SF1|SM01322|SSF52980 NIDE_RS16610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003034|IPR018668 DNA-binding protein VF530-like, bacteria|SAP domain GO:0003677 G3DSA:1.10.720.30|PF09905 NIDE_RS16615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002711|IPR003615 HNH endonuclease|HNH nuclease GO:0003676|GO:0004519 PF01844|SM00507 NIDE_RS16625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000795|IPR004548|IPR005225|IPR009000|IPR009022|IPR027417|IPR031157|IPR032090 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Peptide chain release factor 3|Peptide chain release factor 3, C-terminal|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation protein, beta-barrel domain GO:0003924|GO:0005525|GO:0005737|GO:0006415|GO:0016149 G3DSA:2.40.30.10|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00072|PF00009|PF16658|PR00315|PS00301|PTHR23115|PTHR23115:SF69|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR00503 NIDE_RS16630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003959|IPR027417 ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|SSF52540 NIDE_RS16635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001650|IPR006935|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF00271|PF04851|SM00487|SSF52540 NIDE_RS16640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000629|IPR001650|IPR005580|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|DbpA, RNA-binding domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF03880|PS00039|PTHR24031|PTHR24031:SF261|SM00487|SM00490|SSF52540 NIDE_RS16645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 G3DSA:3.90.80.10|PF00719|PS00387|PTHR10286|PTHR10286:SF0|SSF50324 NIDE_RS16650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS16655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 NIDE_RS16665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|SM00100|SM00419|SSF46785|SSF51206 NIDE_RS16670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PF13442|SSF46626 NIDE_RS16680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021125 Protein of unknown function DUF2127 PF09900 NIDE_RS16685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 NIDE_RS16705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000305 GIY-YIG nuclease superfamily PF01541|PTHR34477|SM00465|SSF82771 NIDE_RS16710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003959|IPR027417 ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|SSF52540 NIDE_RS16725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS16730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PTHR10098|PTHR10098:SF104|SM00028|SSF48452 NIDE_RS16735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001958|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01035|PTHR23504|PTHR23504:SF18|SSF103473 NIDE_RS16740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PF03547|PTHR36838|PTHR36838:SF1 NIDE_RS16765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002052|IPR011639|IPR025931|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Restriction modification methylase Eco57I|S-adenosyl-L-methionine-dependent methyltransferase|TaqI-like C-terminal specificity domain GO:0003676|GO:0003677|GO:0003824|GO:0006304|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF07669|PF12950|PR00507|PS00092|PTHR33841|PTHR33841:SF1|SSF53335 NIDE_RS16770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007636 Restriction endonuclease, type II, XhoI GO:0003677|GO:0009036|GO:0009307 PF04555 NIDE_RS16780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PTHR23083|SM00028|SSF48452 NIDE_RS16785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SM00014|SSF48317 NIDE_RS16790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025737 MetA-pathway of phenol degradation, putative PF13557 NIDE_RS16800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025509 Domain of unknown function DUF4396 PF14342 NIDE_RS16810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 NIDE_RS16825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021218 Protein of unknown function DUF2784 PF10861 NIDE_RS16830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011051|IPR014710|IPR025979 ChrR-like cupin domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF12973|SSF51182 NIDE_RS16835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF16|SSF88659|SSF88946|TIGR02937 NIDE_RS16840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001486|IPR009050|IPR012292 Globin-like|Globin/Protoglobin|Truncated hemoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|PF01152|PTHR10681|SSF46458 NIDE_RS16850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|PTHR33713|SSF143120|TIGR01552 NIDE_RS16855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|SSF143011 NIDE_RS16865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 NIDE_RS16885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005033 YEATS GO:0006355 PF03366 NIDE_RS16895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 NIDE_RS16905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|PTHR33154|SM00418|SSF46785 NIDE_RS16910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013785|IPR024521|IPR026351 Aldolase-type TIM barrel|Domain of unknown function DUF3641|Radical SAM/Cys-rich domain protein GO:0003824 G3DSA:3.20.20.70|PF12345|PTHR11228|PTHR11228:SF20|SSF102114|TIGR04167 NIDE_RS16915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 PF01384|PTHR11101 NIDE_RS16925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014067|IPR017941 Arsenite oxidase, small subunit|Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|SSF50022|TIGR02694 NIDE_RS16930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006656|IPR006657|IPR009010|IPR014066 Arsenite oxidase, large subunit|Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase GO:0016491|GO:0030151|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.40.50.740|PF00384|PF01568|PTHR11615|PTHR11615:SF119|SSF50692|SSF53706|TIGR02693 NIDE_RS16940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023485 Phosphotyrosine protein phosphatase I superfamily G3DSA:3.40.50.270|PF01451|PTHR11717|PTHR11717:SF18|SM00226|SSF52788 NIDE_RS16945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002657|IPR004706 Arsenical-resistance protein Acr3|Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0015103|GO:0015297|GO:0016020|GO:0016021 PF01758|PIRSF005508|PTHR10361|PTHR10361:SF31|TIGR00832 NIDE_RS16950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025714|IPR029063 Methyltransferase domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13847|PTHR10108|PTHR10108:SF924|SSF53335 NIDE_RS16955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|PTHR33154|SM00418|SSF46785 NIDE_RS16960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001107|IPR001972|IPR010201 Band 7 domain|HflK|Stomatin family GO:0016020|GO:0016021 PF01145|PTHR10264|PTHR10264:SF51|SM00244|SSF117892|TIGR01933 NIDE_RS16965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001107|IPR001972|IPR010200 Band 7 domain|HflC|Stomatin family GO:0016020|GO:0016021|GO:0052547 PF01145|PIRSF005651|PR00721|PTHR10264|PTHR10264:SF80|SM00244|SSF117892|TIGR01932 NIDE_RS16970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000559|IPR020628|IPR027417 Formate-tetrahydrofolate ligase, FTHFS|Formate-tetrahydrofolate ligase, FTHFS, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0004329|GO:0005524|GO:0009396 G3DSA:3.10.410.10|G3DSA:3.30.1510.10|G3DSA:3.40.50.300|MF_01543|PF01268|PS00721|PS00722|PTHR10025|SSF52540 NIDE_RS16975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|SSF51261 NIDE_RS16980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004323|IPR011322 Divalent ion tolerance protein, CutA|Nitrogen regulatory PII-like, alpha/beta GO:0010038 G3DSA:3.30.70.830|PF03091|PTHR23419|SSF54913 NIDE_RS16985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PTHR10657|PTHR10657:SF12|SM00450|SSF52821 NIDE_RS16990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF466|SSF51735 NIDE_RS16995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002877|IPR002942|IPR004538|IPR029063 Haemolysin A /rRNA methyltransferase TlyA|RNA-binding S4 domain|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003723|GO:0008168|GO:0032259 G3DSA:3.10.290.10|G3DSA:3.40.50.150|PF01479|PF01728|PIRSF005578|PTHR32319|PTHR32319:SF0|SM00363|SSF53335|SSF55174|TIGR00478 NIDE_RS17000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 G3DSA:1.10.287.1040|MF_00337|PD028235|PF02609|PTHR34137|SSF116842|TIGR01280 NIDE_RS17005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003753|IPR020579|IPR025824 Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain GO:0003676|GO:0006308|GO:0008855|GO:0009318 MF_00378|PF02601|PF13742|PTHR30008|PTHR30008:SF0|TIGR00237 NIDE_RS17010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005235|IPR029052 Metallo-dependent phosphatase-like|Metallophosphoesterase, YmdB-like G3DSA:3.60.21.30|PF13277|PIRSF004789|PTHR36303|PTHR36303:SF1|SSF56300|TIGR00282 NIDE_RS17015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003607|IPR004087|IPR004088|IPR006674|IPR006675|IPR017705|IPR022711 HD domain|HD/PDEase domain|HDIG domain|K Homology domain|K Homology domain, type 1|Ribonuclease Y|Ribonuclease Y, N-terminal GO:0003676|GO:0003723|GO:0006402|GO:0016020 G3DSA:1.10.3210.10|G3DSA:3.30.1370.10|MF_00335|PF00013|PF01966|PF12072|PTHR12826|SM00322|SM00471|SSF109604|SSF54791|TIGR00277|TIGR03319 NIDE_RS17020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007838 Cell division protein ZapA-like PF05164|PTHR34981|PTHR34981:SF1|SSF102829 NIDE_RS17025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 PF06005 NIDE_RS17030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008258|IPR011990|IPR019734|IPR023346 Lysozyme-like domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Transglycosylase SLT domain 1 GO:0005515 G3DSA:1.10.530.10|G3DSA:1.25.40.10|PF01464|PF13432|PF14559|PTHR21666|SM00028|SSF48452|SSF53955 NIDE_RS17035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004383|IPR007197|IPR013785|IPR027492 Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475 G3DSA:3.20.20.70|MF_01849|PF04055|PF13394|PIRSF006004|PTHR30544|PTHR30544:SF5|SSF102114|TIGR00048 NIDE_RS17040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|PTHR11851|PTHR11851:SF136|SSF63411 NIDE_RS17045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal GO:0003824|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PTHR11851|PTHR11851:SF140|SSF63411 NIDE_RS17050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005232|IPR014729|IPR022310 Conserved hypothetical protein CHP00268|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF02540|PIRSF006661|PTHR11807|PTHR11807:SF17|SSF52402|TIGR00268 NIDE_RS17055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002146|IPR005864|IPR028987 ATPase, F0 complex, subunit B, bacterial|ATPase, F0 complex, subunit B/B', bacterial/chloroplast|F-type ATP synthase subunit B-like, membrane domain GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.5.620|MF_01398|PF00430|PTHR33445|SSF81573|TIGR01144 NIDE_RS17060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000454|IPR002379|IPR005953|IPR020537 ATPase, F0 complex, subunit C|ATPase, F0 complex, subunit C, DCCD-binding site|ATPase, F0 complex, subunit C, bacterial/chloroplast|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PR00124|PS00605|PTHR10031|SSF81333|TIGR01260 NIDE_RS17065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000568|IPR023011 ATPase, F0 complex, subunit A|ATPase, F0 complex, subunit A, active site GO:0015078|GO:0015986 G3DSA:1.20.120.220|MF_01393|PF00119|PR00123|PS00449|PTHR11410|SSF81336|TIGR01131 NIDE_RS17070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter PF09527 NIDE_RS17075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005801|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0009058|GO:0016833 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|PTHR11236|SSF56322 NIDE_RS17080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001544|IPR018300 Aminotransferase class IV|Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|PTHR11825|SSF56752 NIDE_RS17085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000189|IPR008258|IPR023346|IPR025392 Domain of unknown function DUF4124|Lysozyme-like domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|PF01464|PF13511|PS00922|PTHR21666|SSF53955 NIDE_RS17090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003953|IPR005288|IPR015939|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|L-aspartate oxidase|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0005737|GO:0008734|GO:0009435|GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PF02910|PR00368|PTHR11632|PTHR11632:SF27|SSF46977|SSF51905|SSF56425|TIGR00551 NIDE_RS17105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 NIDE_RS17110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007312|IPR017850 Alkaline-phosphatase-like, core domain|Phosphoesterase GO:0003824|GO:0008152|GO:0016788 PF04185|PTHR31956|PTHR31956:SF13|SSF53649 NIDE_RS17115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001757|IPR004014|IPR006068|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0016021|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR00119|PR00120|PS00154|PTHR24093|SM00831|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494 NIDE_RS17125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032710 NTF2-like domain G3DSA:3.10.450.50|SSF54427 NIDE_RS17130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SM00028|SSF48452 NIDE_RS17135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS17140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 PF01699 NIDE_RS17145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF02518|PR00344|PTHR24423|PTHR24423:SF458|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874 NIDE_RS17150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001757|IPR004014|IPR006068|IPR006415|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IIIB GO:0000166|GO:0015444|GO:0015693|GO:0016021|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR01836|PS00154|PTHR24093|PTHR24093:SF128|SM00831|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01524 NIDE_RS17155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF24|SSF82693|SSF82714|SSF82866|TIGR00914 NIDE_RS17160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF4|SSF111369|TIGR01730 NIDE_RS17165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|PTHR31964:SF26|SSF52402 NIDE_RS17170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|PTHR13355|PTHR13355:SF8|SSF55729 NIDE_RS17175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR015947 PUA-like domain G3DSA:2.30.130.30|SSF88697 NIDE_RS17180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR016181|IPR029060 Acyl-CoA N-acyltransferase|GNAT domain|PIN domain-like GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729|SSF88723 NIDE_RS17185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR24559|PTHR24559:SF185|SSF53098 NIDE_RS17195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 NIDE_RS17200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 NIDE_RS17210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004193|IPR006047|IPR006048|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 Alpha-amylase/branching enzyme, C-terminal all beta|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0004553|GO:0005975|GO:0043169 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF02806|PF02922|PTHR10357|PTHR10357:SF110|SM00642|SSF51011|SSF51445|SSF81296 NIDE_RS17215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01583|PTHR11055|PTHR11055:SF15|SSF52540 NIDE_RS17220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.90.1200.10|PF01636|SSF56112 NIDE_RS17230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008269|IPR014721|IPR020568|IPR027065|IPR027417 Lon protease|P-loop containing nucleoside triphosphate hydrolase|Peptidase S16, Lon C-terminal|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF05362|PF13654|PR00830|PTHR10046|PTHR10046:SF46|SSF52540|SSF54211 NIDE_RS17235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS17240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF2|SSF52499 NIDE_RS17245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002638|IPR006405|IPR007229 Nicotinate phosphoribosyltransferase family|Nicotinate phosphoribosyltransferase pncB-type|Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0004516|GO:0009435|GO:0019358 G3DSA:3.20.140.10|PF04095|PIRSF000484|PTHR11098|PTHR11098:SF1|SSF51690|SSF54675|TIGR01513 NIDE_RS17260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|PTHR23518|PTHR23518:SF2|SSF103473 NIDE_RS17270 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS17280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|SSF52402 NIDE_RS17285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001757|IPR004014|IPR006068|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0016021|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR00119|PR00121|PS00154|PTHR24093|PTHR24093:SF268|SM00831|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494 NIDE_RS17300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005496 Integral membrane protein TerC GO:0016021 PF03741|PTHR30060|PTHR30060:SF1 NIDE_RS17305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|SSF53335 NIDE_RS17310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018649 SHOCT domain PF09851 NIDE_RS17325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001077|IPR011991|IPR016461|IPR029063|IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain|O-methyltransferase COMT-type|O-methyltransferase, family 2|S-adenosyl-L-methionine-dependent methyltransferase|Winged helix-turn-helix DNA-binding domain GO:0008168|GO:0008171 G3DSA:1.10.10.10|G3DSA:3.40.50.150|PF00891|PF16864|PIRSF005739|PTHR11746|PTHR11746:SF63|SSF46785|SSF53335 NIDE_RS17335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003680|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain G3DSA:3.40.50.360|PF02525|PTHR10204|PTHR10204:SF40|SSF52218 NIDE_RS17350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014509 Uncharacterised conserved protein UCP020606 PF09997|PIRSF020606 NIDE_RS17355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014509 Uncharacterised conserved protein UCP020606 PF09997|PIRSF020606 NIDE_RS17365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF504|SM00382|SSF52540 NIDE_RS17370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 PF01458|PTHR30508|PTHR30508:SF5|SSF101960 NIDE_RS17375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SSF88713 NIDE_RS17380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016181 Acyl-CoA N-acyltransferase PF13480|SSF55729 NIDE_RS17390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011717|IPR011990|IPR013105|IPR019734 Tetratricopeptide TPR-4|Tetratricopeptide repeat|Tetratricopeptide repeat 2|Tetratricopeptide-like helical domain GO:0005515|GO:0042802 G3DSA:1.25.40.10|PF07719|PF07721|PF12895|PF13414|PF13432|PTHR23083|SM00028|SSF48452 NIDE_RS17395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013424 PEP-CTERM protein-sorting domain PF07589|TIGR02595 NIDE_RS17410 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 NIDE_RS17415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019079|IPR029052 Capsule synthesis protein, CapA|Metallo-dependent phosphatase-like G3DSA:3.60.21.30|PF09587|PTHR33393|PTHR33393:SF2|SM00854|SSF56300 NIDE_RS17420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005182 Domain of unknown function DUF304 PF03703 NIDE_RS17425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448 NIDE_RS17430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005247|IPR008914 Phosphatidylethanolamine-binding protein|YbhB/YbcL G3DSA:3.90.280.10|PF01161|PTHR30289|SSF49777|TIGR00481 NIDE_RS17435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000534|IPR016040 NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01118|SSF51735|SSF55347 NIDE_RS17450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002731|IPR008275|IPR018709 ATPase, BadF/BadG/BcrA/BcrD type|CoA enzyme activase|CoA enzyme activase, domain of unknown function DUF2229 G3DSA:3.30.420.40|PF01869|PF09989|PTHR32329|PTHR32329:SF7|SSF53067|TIGR00241 NIDE_RS17455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008869|IPR023094|IPR032710 NTF2-like domain|Toluene tolerance Ttg2/phospholipid-binding protein MlaC|Toluene tolerance protein, alpha-helical G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494|PIRSF004649|PTHR36573 NIDE_RS17500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007153 Adenosine specific kinase G3DSA:2.10.70.30|G3DSA:3.40.1520.10|PF04008|PTHR36155|PTHR36155:SF1|SSF103165 NIDE_RS17505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|PTHR31964:SF26|SSF52402 NIDE_RS17515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007711 Toxin HigB-1 PF05015|PTHR40266|PTHR40266:SF2|SSF143011 NIDE_RS17520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001387|IPR010982|IPR013430 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Toxin-antitoxin system, antidote protein, HigA GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR36924|PTHR36924:SF2|SM00530|SSF47413|TIGR02607 NIDE_RS17525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13669|SSF54593 NIDE_RS17530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001891|IPR012301|IPR012302|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic oxidoreductase|NAD(P)-binding domain GO:0004470|GO:0004471|GO:0006108|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.720|PF00390|PF03949|PIRSF000106|PTHR23406|PTHR23406:SF23|SM00919|SM01274|SSF51735|SSF53223 NIDE_RS17535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002008|IPR002054|IPR003141|IPR003583|IPR004013|IPR010996|IPR016195|IPR022311|IPR027420|IPR029398 DNA polymerase beta, N-terminal domain|DNA polymerase beta, thumb domain|DNA polymerase beta-like, N-terminal domain|DNA polymerase family X, beta-like|DNA-directed DNA polymerase X|Helix-hairpin-helix DNA-binding motif, class 1|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like|Uncharacterised conserved protein UCP005047, YshC GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0006281 G3DSA:1.10.8.310|G3DSA:3.20.20.140|G3DSA:3.30.210.10|G3DSA:3.30.460.10|PF02811|PF14520|PF14716|PF14791|PIRSF005047|PR00870|PTHR11276|SM00278|SM00481|SM00483|SSF47802|SSF81301|SSF89550 NIDE_RS17540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009003 Peptidase S1, PA clan G3DSA:2.40.10.10|PF13365|SSF50494 NIDE_RS17550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PTHR13748|PTHR13748:SF41|SSF52540 NIDE_RS17555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|SSF56801 NIDE_RS17560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001017|IPR017597|IPR029061 Dehydrogenase, E1 component|Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y|Thiamin diphosphate-binding fold GO:0004739|GO:0006086|GO:0008152|GO:0016624|GO:0043231 G3DSA:3.40.50.970|PF00676|PTHR11516|SSF52518|TIGR03182 NIDE_RS17565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005475|IPR009014|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF02779|PF02780|PTHR11624|SM00861|SSF52518|SSF52922 NIDE_RS17570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000089|IPR001078|IPR004167|IPR011053|IPR023213 2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|E3-binding domain|Single hybrid motif GO:0008152|GO:0016746 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PTHR23151|SSF47005|SSF51230|SSF52777 NIDE_RS17575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 NIDE_RS17580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018775 Nucleotidyltransferase, predicted PF10127 NIDE_RS17585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF118|SSF49764 NIDE_RS17590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR31299|SSF53271 NIDE_RS17600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032710 NTF2-like domain G3DSA:3.10.450.50|SSF54427 NIDE_RS17605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|PTHR31964:SF26|SSF52402 NIDE_RS17610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS17615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002109|IPR011767|IPR012336 Glutaredoxin|Glutaredoxin active site|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PS00195|SSF52833 NIDE_RS17620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR003781|IPR013816|IPR016040|IPR016102|IPR016181|IPR032875 ATP-grasp fold, subdomain 2|Acyl-CoA N-acyltransferase|CoA-binding|GNAT domain|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0005524|GO:0008080|GO:0048037 G3DSA:3.30.470.20|G3DSA:3.40.50.261|G3DSA:3.40.50.720|G3DSA:3.40.630.30|PF00583|PF13380|PF13549|PF13607|PTHR11117|PTHR11117:SF8|SM00881|SSF51735|SSF52210|SSF55729|SSF56059 NIDE_RS17630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011031 Multihaem cytochrome G3DSA:3.90.10.10|SSF48695 NIDE_RS17640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011031 Multihaem cytochrome G3DSA:1.10.780.10|SSF48695 NIDE_RS17645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012312 Haemerythrin-like G3DSA:1.20.120.520|PF01814 NIDE_RS17650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002321|IPR010980 Cytochrome c, class II|Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 G3DSA:1.20.120.10|PF01322|SSF47175 NIDE_RS17655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PTHR32154|SSF52518 NIDE_RS17660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002880|IPR009014|IPR029061|IPR033412 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF01855|PF17147|PTHR32154|PTHR32154:SF21|SSF52518|SSF52922 NIDE_RS17670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024623 Uncharacterised protein family YtxH PF12732 NIDE_RS17675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PR00421|PS00194|PTHR10438|PTHR10438:SF281|SSF52833|TIGR01068 NIDE_RS17680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS17685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016898|IPR022486|IPR022488|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Polyphosphate kinase 2|Polyphosphate kinase 2, PA0141|Polyphosphate kinase-2-related GO:0006793|GO:0008976 G3DSA:3.40.50.300|PF03976|PIRSF028756|PTHR34383|PTHR34383:SF1|SSF52540|TIGR03707 NIDE_RS17690 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003787|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein G3DSA:3.40.1260.10|PF02635|SSF75169 NIDE_RS17695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS17705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000572|IPR005066|IPR008335|IPR014756 Eukaryotic molybdopterin oxidoreductase|Immunoglobulin E-set|Moybdenum cofactor oxidoreductase, dimerisation|Oxidoreductase, molybdopterin-binding domain GO:0016491|GO:0030151|GO:0042128|GO:0055114 G3DSA:2.60.40.650|G3DSA:3.90.420.10|PF00174|PF03404|PR00407|PTHR19372|SSF56524|SSF81296 NIDE_RS17710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:3.30.300.20|PF02566|PTHR39624|SSF82784 NIDE_RS17715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PTHR35008|PTHR35008:SF4|SSF46626 NIDE_RS17720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021796 Protein of unknown function DUF3365 PF11845 NIDE_RS17725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS17730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005798|IPR009056|IPR016174|IPR027387 Cytochrome b/b6, C-terminal|Cytochrome b/b6-like domain|Cytochrome c-like domain|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016491|GO:0020037|GO:0022904 G3DSA:1.10.760.10|G3DSA:1.20.810.10|PF00032|PF00033|PF00034|PTHR19271|SSF46626|SSF81342|SSF81648 NIDE_RS17735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005805|IPR014349|IPR017941 Rieske [2Fe-2S] iron-sulphur domain|Rieske iron-sulphur protein|Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0016491|GO:0016679|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PR00162|PTHR10134|SSF50022 NIDE_RS17740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021309 Protein of unknown function DUF2892 PF11127 NIDE_RS17745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SSF47175 NIDE_RS17750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008168|IPR009056 Cytochrome c, class IC|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PR00605|SSF46626 NIDE_RS17755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:3.30.300.20|PF02566|PTHR33797|PTHR33797:SF1|SSF82784 NIDE_RS17760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001437|IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain|Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 G3DSA:1.10.286.20|G3DSA:3.10.50.30|PF01272|PF14760|PTHR30437|PTHR30437:SF5|SSF54534 NIDE_RS17765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|PTHR31964:SF26|SSF52402 NIDE_RS17780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000811|IPR011834 Alpha-glucan phosphorylase|Glycosyl transferase, family 35 GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PS00102|PTHR11468|PTHR11468:SF9|SSF53756|TIGR02094 NIDE_RS17785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|PTHR12526|PTHR12526:SF220|SSF53756 NIDE_RS17795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005586 ABC-type transport auxiliary lipoprotein component G3DSA:3.40.50.10610|PF03886|PTHR36698|PTHR36698:SF1|SSF159594 NIDE_RS17800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003399 Mce/MlaD PF02470|PTHR36698|PTHR36698:SF2 NIDE_RS17805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF483|SM00382|SSF52540 NIDE_RS17810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002645|IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE|STAS domain GO:0006810|GO:0043190 G3DSA:3.30.750.24|PF02405|PF13466|PTHR30188|PTHR30188:SF3|SSF52091|TIGR00056 NIDE_RS17815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009599 Protein of unknown function DUF1207 PF06727 NIDE_RS17825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019251 Domain of unknown function DUF2231, transmembrane PF09990 NIDE_RS17830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF13231|PTHR33908|PTHR33908:SF3 NIDE_RS17835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 NIDE_RS17840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30026|SSF56954 NIDE_RS17845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF16|SSF82693|SSF82714|SSF82866 NIDE_RS17850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF15|SSF111369|TIGR01730 NIDE_RS17855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021309 Protein of unknown function DUF2892 PF11127 NIDE_RS17860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023614 Porin domain G3DSA:2.40.160.10|SSF56935 NIDE_RS17865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF14 NIDE_RS17870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025737 MetA-pathway of phenol degradation, putative PF13557 NIDE_RS17880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 G3DSA:1.20.120.10|SSF47175 NIDE_RS17885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019251 Domain of unknown function DUF2231, transmembrane PF09990 NIDE_RS17890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PTHR10632|PTHR10632:SF7|SSF51905 NIDE_RS17895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007891 CHASE3 PF05227 NIDE_RS17900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008457 Copper resistance protein D GO:0016021 PF05425 NIDE_RS17910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|SSF56925 NIDE_RS17915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012312 Haemerythrin-like G3DSA:1.20.120.520|PF01814 NIDE_RS17920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PTHR24567|SM00100|SM00419|SSF46785|SSF51206 NIDE_RS17925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS17930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS17935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013784|IPR014766|IPR029413 Carbohydrate-binding-like fold|Carboxypeptidase, regulatory domain|Rhamnogalacturonan lyase, domain II GO:0030246 G3DSA:2.60.40.1120|PF14686|SSF49452 NIDE_RS17940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002355|IPR008972 Cupredoxin|Multicopper oxidase, copper-binding site GO:0005507 G3DSA:2.60.40.420|PS00080|SSF49503 NIDE_RS17945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR002078|IPR002197|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|PAS domain|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.40.50.300|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|SM00382|SSF46689|SSF52540|SSF55785 NIDE_RS17950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS17955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655|IPR013656|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF08447|PF08448|PR00344|PTHR24423|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS17960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|PTHR32071:SF18|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS17965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30572|PTHR30572:SF1|SSF111369|TIGR01730 NIDE_RS17970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30572|PTHR30572:SF7 NIDE_RS17975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006153|IPR018422 Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999|PTHR10110|PTHR10110:SF86 NIDE_RS17980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006685|IPR010920|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PTHR30221|PTHR30221:SF4|SSF50182|SSF82689 NIDE_RS17985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011486|IPR023614 Porin domain|Putative beta-barrel porin-2, OmpL-like. bbp2 G3DSA:2.40.160.10|PF07642 NIDE_RS17990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003698|IPR006638|IPR007197|IPR013785|IPR031691 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Lipoyl synthase|Lipoyl synthase, N-terminal|Radical SAM GO:0003824|GO:0009107|GO:0016992|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_00206|PF04055|PF16881|PIRSF005963|PTHR10949|SM00729|SSF102114|TIGR00510 NIDE_RS17995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|E3-binding domain|Single hybrid motif GO:0008152|GO:0016746 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|PTHR23151|SSF47005|SSF51230|SSF52777 NIDE_RS18000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005475|IPR009014|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF02779|PF02780|PTHR11624|SM00861|SSF52518|SSF52922 NIDE_RS18005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001017|IPR017597|IPR029061 Dehydrogenase, E1 component|Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y|Thiamin diphosphate-binding fold GO:0004739|GO:0006086|GO:0008152|GO:0016624|GO:0043231 G3DSA:3.40.50.970|PF00676|PTHR11516|SSF52518|TIGR03182 NIDE_RS18010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 NIDE_RS18020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0005737 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972|TIGR00172 NIDE_RS18035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007801|IPR013022 Uncharacterised protein family UPF0276|Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF05114 NIDE_RS18045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|PTHR31223|PTHR31223:SF1|SSF102405|TIGR00730 NIDE_RS18050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF64182 NIDE_RS18055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002610|IPR022764 Peptidase S54, rhomboid|Peptidase S54, rhomboid domain GO:0004252|GO:0006508|GO:0016021 G3DSA:1.20.1540.10|PF01694|PTHR22936|SSF144091 NIDE_RS18060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR003594|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000160|GO:0016310|GO:0016772 G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF02518|PR00344|PTHR24423|PTHR24423:SF458|SM00387|SM00448|SSF52172|SSF55874 NIDE_RS18065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003135|IPR005875|IPR011054|IPR013815|IPR013816|IPR016185|IPR029752 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|Phosphoribosylaminoimidazole carboxylase, ATPase subunit|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004638|GO:0005524|GO:0006189 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01928|PF02222|PS00065|PTHR11609|PTHR11609:SF5|SSF51246|SSF52440|SSF56059|TIGR01161 NIDE_RS18070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000031|IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE|Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189|GO:0034023 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|PTHR23046|PTHR23046:SF2|SM01001|SSF52255|TIGR01162 NIDE_RS18075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:2.40.50.100|PF13533|PTHR30386|PTHR30386:SF8|SSF111369 NIDE_RS18080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|PTHR30203:SF12|SSF56954 NIDE_RS18085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR011527|IPR027417 ABC transporter type 1, transmembrane domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PTHR24221|PTHR24221:SF161|SSF52540|SSF90123 NIDE_RS18090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR011527|IPR027417 ABC transporter type 1, transmembrane domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PTHR24221|PTHR24221:SF138|SSF52540|SSF90123 NIDE_RS18095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024478 4HB MCP domain PF12729 NIDE_RS18100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PTHR21600|PTHR21600:SF24|SM00363|SSF55120|SSF55174|TIGR00093 NIDE_RS18105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005925|IPR006035|IPR023696 Agmatinase-related|Ureohydrolase|Ureohydrolase domain GO:0046872 G3DSA:3.40.800.10|PF00491|PIRSF036979|PR00116|PTHR11358|PTHR11358:SF34|SSF52768|TIGR01230 NIDE_RS18110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002724|IPR016104|IPR016105 Pyruvoyl-dependent arginine decarboxylase|Pyruvoyl-dependent histidine/arginine decarboxylase|Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain GO:0006520|GO:0006527|GO:0008792|GO:0016831 G3DSA:3.50.20.10|MF_01404|PD010449|PF01862|PIRSF005216|PTHR40438|PTHR40438:SF1|SSF56271|TIGR00286 NIDE_RS18115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR015590|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00687|PTHR11699|PTHR11699:SF108|SSF53720 NIDE_RS18125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13462|PTHR13887|SSF52833 NIDE_RS18130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002773|IPR029035 DHS-like NAD/FAD-binding domain|Deoxyhypusine synthase GO:0008612 G3DSA:3.40.910.10|PF01916|PTHR11703|PTHR11703:SF3|SSF52467 NIDE_RS18140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001077|IPR011991|IPR016461|IPR029063|IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain|O-methyltransferase COMT-type|O-methyltransferase, family 2|S-adenosyl-L-methionine-dependent methyltransferase|Winged helix-turn-helix DNA-binding domain GO:0008168|GO:0008171 G3DSA:1.10.10.10|G3DSA:3.40.50.150|PF00891|PF16864|PIRSF005739|PTHR11746|PTHR11746:SF63|SSF46785|SSF53335 NIDE_RS18155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS18160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR011712 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF02518|PF07730|PTHR24421|PTHR24421:SF23|SM00387|SSF55874 NIDE_RS18165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021383 Protein of unknown function DUF3015 PF11220 NIDE_RS18170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005021 Phage terminase PF03354|PTHR41287 NIDE_RS18175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009061|IPR010093 Putative DNA-binding domain|SinI-like, DNA-binding domain GO:0003677 G3DSA:1.10.1660.10|PF12728|SSF46955|TIGR01764 NIDE_RS18190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 NIDE_RS18195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 NIDE_RS18205 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021005|IPR023286 ABATE domain|Zinc finger, CGNR G3DSA:1.10.3300.10|PF11706|SSF160904 NIDE_RS18235 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006433 Prohead protease PF04586|TIGR01543 NIDE_RS18255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728 NIDE_RS18295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000924|IPR001412|IPR004514|IPR011035|IPR014729|IPR020056|IPR020058|IPR020059|IPR020061|IPR022861 Aminoacyl-tRNA synthetase, class I, conserved site|Glutamine-tRNA ligase, bacterial|Glutamine-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004819|GO:0005524|GO:0005737|GO:0006412|GO:0006418|GO:0006425|GO:0016876|GO:0043039 G3DSA:1.10.1160.10|G3DSA:2.40.240.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00126|PF00749|PF03950|PR00987|PS00178|PTHR11451|PTHR11451:SF29|SSF50715|SSF52374|TIGR00440 NIDE_RS18305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524|IPR032781 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PF16326|PS00211|PTHR19211|PTHR19211:SF45|SM00382|SSF52540 NIDE_RS18320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751|IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039 G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:1.10.8.70|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00022_B|PF00749|PR00987|PS00178|PTHR11451|PTHR11451:SF41|SSF48163|SSF52374|TIGR00464 NIDE_RS18325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001221|IPR008333|IPR017938 Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00970|PR00410|PTHR19370|SSF52343|SSF63380 NIDE_RS18330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001041|IPR001055|IPR012675 2Fe-2S ferredoxin-type iron-sulfur binding domain|Adrenodoxin|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PR00355|PTHR23426|SSF54292 NIDE_RS18335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000944|IPR011991|IPR030489 Transcription regulator Rrf2-type|Transcription regulator Rrf2-type, conserved site|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PS01332|PTHR33221|SSF46785|TIGR00738 NIDE_RS18340 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000192|IPR010240|IPR015421|IPR015422|IPR015424|IPR016454|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Cysteine desulfurase IscS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170|GO:0031071|GO:0044571 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00331|PF00266|PIRSF005572|PS00595|PTHR11601|PTHR11601:SF34|SSF53383 NIDE_RS18345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002871|IPR011339 ISC system FeS cluster assembly, IscU scaffold|NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 G3DSA:3.90.1010.10|PF01592|PTHR10093|SSF82649|TIGR01999 NIDE_RS18350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000361|IPR016092|IPR017870 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|PF01521|PS01152|PTHR10072|SSF89360|TIGR00049 NIDE_RS18360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010236|IPR013126|IPR018181|IPR029047|IPR029048 Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain|ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF00012|PR00301|PS00297|PS00329|PS01036|PTHR19375|PTHR19375:SF173|SSF100920|SSF100934|SSF53067|TIGR01991 NIDE_RS18365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 G3DSA:1.10.10.600|PF04384|PIRSF039003|PTHR37532|PTHR37532:SF1|SSF140319|TIGR03412 NIDE_RS18370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001264|IPR001460|IPR012338|IPR012340|IPR022967|IPR023346|IPR031376 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Nucleic acid-binding, OB-fold|Penicillin-binding protein, OB-like domain|Penicillin-binding protein, transpeptidase|RNA-binding domain, S1 GO:0008658 G3DSA:1.10.3810.10|G3DSA:2.40.50.140|G3DSA:3.40.710.10|PF00905|PF00912|PF17092|PTHR32282|PTHR32282:SF5|SM00316|SSF50249|SSF53955|SSF56601|TIGR02074 NIDE_RS18375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000640|IPR000795|IPR005225|IPR006298|IPR009000|IPR009022|IPR027417|IPR031157 Elongation factor G, III-V domain|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PR00315|PS00301|PTHR23115|PTHR23115:SF14|SM00838|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394 NIDE_RS18385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|PTHR10681|SSF52833 NIDE_RS18390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012336|IPR013766 Thioredoxin domain|Thioredoxin-like fold GO:0045454 G3DSA:3.40.30.10|PF00085|SSF52833 NIDE_RS18395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS18415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021890 Protein of unknown function DUF3501 PF12007 NIDE_RS18420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004017|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Cysteine-rich domain G3DSA:3.30.70.20|PF02754|PS00198|PTHR32479|PTHR32479:SF9|SSF54862 NIDE_RS18425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003251|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Rubrerythrin GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1260.10|PF02915|PTHR33746|PTHR33746:SF3|SSF47240 NIDE_RS18430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|PTHR33202|PTHR33202:SF7|SSF46785 NIDE_RS18435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000888|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 G3DSA:2.60.120.10|PD001462|PF00908|PTHR21047|SSF51182|TIGR01221 NIDE_RS18445 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003749|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|SSF54285 NIDE_RS18450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PTHR33175|SM00411|SSF47729 NIDE_RS18475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS18480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS18485 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010686 Protein of unknown function DUF1264 PF06884|PTHR31360 NIDE_RS18490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010686 Protein of unknown function DUF1264 PF06884 NIDE_RS18495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004852|IPR009056|IPR026259 Cytochrome c-like domain|Di-c-type haem protein, MauG/cytochrome c peroxidase|Di-haem cytochrome c peroxidase GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|PF00034|PF03150|PIRSF000294|PTHR30600|PTHR30600:SF7|SSF46626 NIDE_RS18500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13669|SSF54593 NIDE_RS18505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR015590|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00687|PTHR11699|PTHR11699:SF144|SSF53720 NIDE_RS18510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005097|IPR016040|IPR032095 NAD(P)-binding domain|Saccharopine dehydrogenase, C-terminal|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF03435|PF16653|SSF51735|SSF55347 NIDE_RS18515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007557 PSP1, C-terminal PF04468|PTHR21600|PTHR21600:SF3 NIDE_RS18520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010359 HTH domain, IrrE-type PF06114 NIDE_RS18525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002740|IPR015947 EVE domain|PUA-like domain G3DSA:3.10.590.10|PF01878|PTHR14087|SSF88697 NIDE_RS18530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003848|IPR014729 Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF02698|PTHR30336|PTHR30336:SF1 NIDE_RS18540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005358 Putative zinc- or iron-chelating domain containing protein PF03692 NIDE_RS18545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011863|IPR023214 HAD-like domain|Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein G3DSA:3.40.50.1000|G3DSA:3.90.1470.10|PF00702|SSF56784|TIGR02137 NIDE_RS18550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001650|IPR002121|IPR002464|IPR004589|IPR010997|IPR011545|IPR011991|IPR014001|IPR018982|IPR027417|IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain|DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site|HRDC domain|HRDC-like|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RQC domain|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003676|GO:0003824|GO:0005524|GO:0005622|GO:0006260|GO:0006281|GO:0006310|GO:0008026|GO:0043140|GO:0044237 G3DSA:1.10.10.10|G3DSA:1.10.150.80|G3DSA:3.40.50.300|PF00270|PF00271|PF00570|PF09382|PF16124|PS00690|PTHR13710|PTHR13710:SF81|SM00341|SM00487|SM00490|SM00956|SSF46785|SSF47819|SSF52540|TIGR00614 NIDE_RS18560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025388 Alginate export domain PF13372 NIDE_RS18565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003369|IPR003998|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E|Twin-arginine translocation protein TatB-like GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0016021 MF_00236|PF02416|PR01506|PTHR33162|TIGR01411 NIDE_RS18570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003369|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MF_00236|PF02416|PTHR33162|TIGR01411 NIDE_RS18575 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003788|IPR029063 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF02636|SSF53335 NIDE_RS18585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 NIDE_RS18590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR011527|IPR027417 ABC transporter type 1, transmembrane domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PTHR24221|PTHR24221:SF161|SSF52540|SSF90123 NIDE_RS18595 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF49|SSF53448 NIDE_RS18600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011499|IPR014546 Lipid A biosynthesis|Uncharacterised conserved protein, lipid A biosynthesis GO:0008915|GO:0009245 PD339292|PF07578|PIRSF028440|SM01259 NIDE_RS18605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 PF02366|PTHR33908|PTHR33908:SF3 NIDE_RS18615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011659|IPR015943 WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF07676|PTHR32161|PTHR32161:SF8|SSF82171 NIDE_RS18620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 G3DSA:1.10.390.10|PTHR11533|PTHR11533:SF185|SSF55486 NIDE_RS18625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS18630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000897|IPR003593|IPR004390|IPR013822|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY GO:0005525|GO:0006614 G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02881|PS00300|PTHR11564|PTHR11564:SF16|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064 NIDE_RS18635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002036|IPR023091 Endoribonuclease YbeY|Metalloprotease catalytic domain, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|PF02130|PTHR22881|SSF55486|TIGR00043 NIDE_RS18640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR003714|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0005524 G3DSA:3.40.50.300|PF02562|PTHR30473|PTHR30473:SF1|SM00382|SSF52540 NIDE_RS18645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR015919 Cadherin-like GO:0005509|GO:0016020 SSF49313 NIDE_RS18660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain PF14341 NIDE_RS18665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012902|IPR032092 Prokaryotic N-terminal methylation site|Type IV Pilus-assembly protein W GO:0043683 PF13544|PF16074|PS00409|TIGR02532 NIDE_RS18675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:3.30.700.10|SSF54523 NIDE_RS18680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001482|IPR007831|IPR027417 General secretory system II, protein E, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PF05157|PS00662|PTHR30258|PTHR30258:SF1|SSF160246|SSF52540 NIDE_RS18695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012902 Prokaryotic N-terminal methylation site TIGR02532 NIDE_RS18700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF12019|SSF54523 NIDE_RS18705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000045|IPR010627|IPR014032 Peptidase A24A, N-terminal|Peptidase A24A, prepilin type IV, bacterial|Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PF01478|PF06750|PR00864|PTHR30487|PTHR30487:SF0 NIDE_RS18710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF583|SM00421|SSF46894 NIDE_RS18715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001537|IPR004441|IPR013123|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|RNA methyltransferase TrmH family|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PF08032|PTHR12029|SM00967|SSF55315|SSF75217|TIGR00186 NIDE_RS18720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009080|IPR014729|IPR015273|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423 G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|PTHR10890|SM00840|SSF47323|SSF52374|TIGR00435 NIDE_RS18725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR032816|IPR032818 DedA family|SNARE associated Golgi protein PF09335|PTHR30353|PTHR30353:SF13 NIDE_RS18730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002828|IPR030048 Survival protein SurE|Survival protein SurE-like phosphatase/nucleotidase GO:0008252|GO:0016787 G3DSA:3.40.1210.10|MF_00060|PF01975|PTHR30457|SSF64167|TIGR00087 NIDE_RS18740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|PTHR30204|PTHR30204:SF15|SM00422|SSF46955 NIDE_RS18745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000119|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|PTHR33175|PTHR33175:SF2|SM00411|SSF47729 NIDE_RS18750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000891|IPR002034|IPR005675|IPR013709|IPR013785 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Citramalate synthase|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|PF00682|PF08502|PS00815|PTHR10277|PTHR10277:SF5|SM00917|SSF110921|SSF51569|TIGR00977 NIDE_RS18755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001048|IPR001057|IPR001341|IPR002912|IPR005260|IPR018042|IPR027795 ACT domain|Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase|GATS-like ACT domain|Glutamate/acetylglutamate kinase GO:0004072|GO:0006561|GO:0008152|GO:0008652|GO:0009089|GO:0016597 G3DSA:3.30.70.260|G3DSA:3.40.1160.10|PF00696|PF01842|PF13840|PIRSF000726|PR00474|PS00324|PTHR21499|PTHR21499:SF27|SSF53633|SSF55021|TIGR00656|TIGR00657 NIDE_RS18760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004456|IPR006124|IPR017849|IPR017850 2,3-bisphosphoglycerate-independent phosphoglycerate mutase|Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Metalloenzyme GO:0003824|GO:0008152|GO:0046537|GO:0046872 G3DSA:3.40.720.10|PF01676|PF10143|PIRSF006392|PTHR31209|PTHR31209:SF4|SSF53649 NIDE_RS18765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000634|IPR001926|IPR004450|IPR026260 Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine synthase, bacterial/archaeal|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004795|GO:0006520|GO:0009088|GO:0030170 G3DSA:3.40.50.1100|PF00291|PIRSF038945|PS00165|PTHR10314|PTHR10314:SF5|SSF53686|TIGR00260 NIDE_RS18770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001342|IPR002912|IPR005106|IPR016040|IPR016204|IPR019811 ACT domain|Aspartate/homoserine dehydrogenase, NAD-binding|Homoserine dehydrogenase|Homoserine dehydrogenase, catalytic|Homoserine dehydrogenase, conserved site|NAD(P)-binding domain GO:0004412|GO:0006520|GO:0008152|GO:0016491|GO:0016597|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00742|PF01842|PF03447|PIRSF000098|PS01042|PTHR21499|PTHR21499:SF2|SSF51735|SSF55021|SSF55347 NIDE_RS18775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF302|SSF53383 NIDE_RS18780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004569|IPR013785 Aldolase-type TIM barrel|Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0003824|GO:0005737|GO:0008615|GO:0033856 G3DSA:3.20.20.70|MF_00279|PF03740|PTHR30456|PTHR30456:SF0|SSF63892|TIGR00559 NIDE_RS18785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000631|IPR004443|IPR017953|IPR029056|IPR030677 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Bifunctional NAD(P)H-hydrate repair enzyme Nnr|Carbohydrate kinase, predicted, conserved site|Ribokinase-like|YjeF N-terminal domain GO:0052855 G3DSA:3.40.1190.20|G3DSA:3.40.50.10260|MF_01965|MF_01966|PF01256|PF03853|PIRSF017184|PS01050|PTHR12592|PTHR12592:SF0|SSF53613|SSF64153|TIGR00196|TIGR00197 NIDE_RS18790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003442|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.40.50.300|PF02367|PTHR33540|PTHR33540:SF2|SSF52540|TIGR00150 NIDE_RS18795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 PF06305 NIDE_RS18800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000432|IPR005748|IPR007695|IPR007696|IPR007860|IPR007861|IPR016151|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS, clamp|DNA mismatch repair protein MutS, connector domain|DNA mismatch repair protein MutS, core|DNA mismatch repair protein MutS, type 1|DNA mismatch repair protein MutS-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.30.420.110|G3DSA:3.40.1170.10|G3DSA:3.40.50.300|MF_00096|PF00488|PF01624|PF05188|PF05190|PF05192|PIRSF037677|PS00486|PTHR11361|PTHR11361:SF86|SM00533|SM00534|SSF48334|SSF52540|SSF53150|SSF55271|TIGR01070 NIDE_RS18815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|PTHR11851|SSF63411 NIDE_RS18820 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0000175|GO:0003676|GO:0003723|GO:0004654|GO:0006396|GO:0006402 G3DSA:1.10.10.400|G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|PTHR11252|PTHR11252:SF0|SM00316|SM00322|SSF46915|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591 NIDE_RS18825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|PTHR23321|SM01387|SSF47060|TIGR00952 NIDE_RS18830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002501|IPR014780|IPR020103|IPR032819 Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain|tRNA pseudouridine synthase II, TruB|tRNA pseudouridylate synthase B, C-terminal GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 MF_01080|PF01509|PF16198|PTHR13767|PTHR13767:SF2|SSF55120|TIGR00431 NIDE_RS18835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000238|IPR015946|IPR023799 K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain GO:0006364 G3DSA:3.30.300.20|MF_00003|PD007327|PF02033|PTHR33515|SSF89919|TIGR00082 NIDE_RS18840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007546 Protein of unknown function DUF503 G3DSA:3.30.70.1120|PF04456|PTHR36441|SSF103007 NIDE_RS18845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000178|IPR005225|IPR006847|IPR009000|IPR023115|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain GO:0003743|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF04760|PF11987|PS01176|PTHR23115|PTHR23115:SF184|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 NIDE_RS18850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003029|IPR004087|IPR009019|IPR010213|IPR012340|IPR013735|IPR015946|IPR022967|IPR025249|IPR030842 K Homology domain|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|S1 domain|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination/antitermination protein NusA, bacterial GO:0003676|GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF00575|PF08529|PF13184|PTHR22648|PTHR22648:SF0|SM00316|SM00322|SSF50249|SSF54814|SSF69705|TIGR01953 NIDE_RS18855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003728|IPR028989|IPR028998 Ribosome maturation factor RimP|Ribosome maturation factor RimP, C-terminal|Ribosome maturation factor RimP, N-terminal GO:0042274 G3DSA:2.30.30.180|G3DSA:3.30.300.70|MF_01077|PF02576|PTHR33867|PTHR33867:SF1|SSF74942|SSF75420 NIDE_RS18860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001544|IPR005784 Aminotransferase class IV|D-amino acid aminotransferase GO:0003824|GO:0008152|GO:0008483|GO:0030170|GO:0046416 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PTHR11825|PTHR11825:SF38|SSF56752|TIGR01121 NIDE_RS18865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018990 Proteinase inhibitor I42, chagasin PF09394|SSF141066 NIDE_RS18870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PTHR21496|SSF50022 NIDE_RS18875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003795 Protein of unknown function DUF192 PF02643|PTHR37953|PTHR37953:SF1 NIDE_RS18880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12838|PS00198|PTHR24960|PTHR24960:SF38|SSF54862 NIDE_RS18890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008972 Cupredoxin G3DSA:2.60.40.420|SSF49503 NIDE_RS18895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001045|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Spermidine/spermine synthases GO:0003824 G3DSA:3.40.50.150|MF_00198|PF01564|PTHR12176|SSF53335 NIDE_RS18900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS18905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028357 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|PTHR11374|PTHR11374:SF18|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 NIDE_RS18915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF03130|PF13646|PTHR12697|SM00567|SSF48371 NIDE_RS18920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF13646|PTHR12697|PTHR12697:SF18|SM00567|SSF48371 NIDE_RS18930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF03130|PF13646|PTHR12697|PTHR12697:SF5|SM00567|SSF48371 NIDE_RS18940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002591|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824|GO:0008152 G3DSA:3.40.720.10|PF01663|SSF53649 NIDE_RS18950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024952 Lipoprotein LPP20-like PF02169 NIDE_RS18965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010428 Zinicin-like metallopeptidase PF06262|PTHR41522|SSF55486 NIDE_RS18970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001098|IPR002298|IPR002421|IPR002562|IPR008918|IPR012337|IPR018320|IPR019760|IPR020045|IPR020046|IPR029060 3'-5' exonuclease domain|5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA-directed DNA polymerase, family A, conserved site|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN domain-like|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006139|GO:0006260|GO:0006261|GO:0008408 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF01612|PF02739|PR00868|PS00447|PTHR10133|PTHR10133:SF27|SM00279|SM00474|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593 NIDE_RS18975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR019099 Uncharacterised protein family PGPGW, transmembrane PF09656 NIDE_RS18985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027396 DsrEFH-like G3DSA:3.40.1260.10|SSF75169 NIDE_RS18990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000445|IPR003265|IPR004035|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III, iron-sulphur binding site|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PIRSF001435|PS00764|PTHR10359|SM00478|SSF48150 NIDE_RS18995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 MF_00358|PF01165|PTHR21109|PTHR21109:SF3|TIGR00030 NIDE_RS19000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004227|IPR012886|IPR013802|IPR022384 Formiminotransferase catalytic domain|Formiminotransferase subdomain|Formiminotransferase, C-terminal subdomain|Formiminotransferase, N-terminal subdomain GO:0005542|GO:0008152|GO:0016740 G3DSA:3.30.70.670|G3DSA:3.30.990.10|PF02971|PF07837|PTHR12234|PTHR12234:SF0|SM01221|SM01222|SSF55116|TIGR02024 NIDE_RS19005 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001455 TusA-like domain G3DSA:3.30.110.40|PF01206|PS01148|PTHR33279|SSF64307 NIDE_RS19010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027396|IPR032836 DsrE/DsrF/DrsH-like family|DsrEFH-like G3DSA:3.40.1260.10|PF13686|PTHR34655|PTHR34655:SF2|SSF75169 NIDE_RS19015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PTHR21266|SSF50022|SSF55961 NIDE_RS19020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003148|IPR006037|IPR006153|IPR016040 Cation/H+ exchanger|NAD(P)-binding domain|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, N-terminal GO:0006812|GO:0006813|GO:0008324|GO:0015299|GO:0016021|GO:0055085 G3DSA:3.30.70.1450|G3DSA:3.40.50.720|PF00999|PF02080|PF02254|PTHR16254|PTHR16254:SF14|SSF116726|SSF51735 NIDE_RS19025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PTHR18901|SSF56784|TIGR01509 NIDE_RS19035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001509|IPR008089|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Nucleotide sugar epimerase GO:0003824|GO:0005975|GO:0016857|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PR01713|PTHR10366|PTHR10366:SF77|SSF51735 NIDE_RS19040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF13483|SSF56281 NIDE_RS19045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR36113|SSF54593 NIDE_RS19050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS19055 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 G3DSA:3.40.50.10090|PF02602|PTHR40082|SSF69618 NIDE_RS19065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 NIDE_RS19075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007372 Lipid/polyisoprenoid-binding, YceI-like G3DSA:2.40.128.110|PF04264|PTHR34406|PTHR34406:SF1|SM00867|SSF101874 NIDE_RS19080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF13103|SSF74653 NIDE_RS19085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF285|SM00829|SSF50129|SSF51735 NIDE_RS19090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004839|IPR011282|IPR015421|IPR015422|IPR015424 2-amino-3-ketobutyrate coenzyme A ligase|Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006567|GO:0008890|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00985|PF00155|PTHR13693|PTHR13693:SF60|SSF53383|TIGR01822 NIDE_RS19095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007428 MlaA lipoprotein GO:0016020 PF04333|PR01805|PTHR30035 NIDE_RS19100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR12277|SSF53474 NIDE_RS19105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011250|IPR025178 Domain of unknown function DUF4105|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PF13387|SSF56925 NIDE_RS19110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021383 Protein of unknown function DUF3015 PF11220 NIDE_RS19130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002838|IPR016031 Mitochondrial biogenesis protein AIM24|Tryptophan RNA-binding attenuator protein-like domain G3DSA:3.60.160.10|PF01987|PTHR31801|PTHR31801:SF0|SSF51219|TIGR00266 NIDE_RS19140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003607|IPR013976 HD/PDEase domain|Metal-dependent hydrolase HDOD G3DSA:1.10.3150.10|PF08668|PTHR33525|PTHR33525:SF3|SM00471|SSF109604 NIDE_RS19145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000160|IPR001789|IPR011006|IPR029787 CheY-like superfamily|GGDEF domain|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00990|SM00267|SM00448|SSF52172|SSF55073|TIGR00254 NIDE_RS19150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021455|IPR029024 Protein of unknown function DUF3106|TerB-like G3DSA:1.10.3680.10|PF11304|SSF158791 NIDE_RS19165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 NIDE_RS19175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 NIDE_RS19180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006379|IPR006381|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 G3DSA:3.30.980.20|G3DSA:3.40.50.1000|PF08282|SSF56784|TIGR01484|TIGR01486 NIDE_RS19190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008910 Conserved TM helix PF05552 NIDE_RS19195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF93|SSF53448 NIDE_RS19205 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF141371 NIDE_RS19210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS19260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006118|IPR006119|IPR011109 DNA-binding recombinase domain|Recombinase, conserved site|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PF07508|PS00397|PTHR30461|PTHR30461:SF3|SM00857|SSF53041 NIDE_RS19280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR007692|IPR007693|IPR007694|IPR016136|IPR027417 AAA+ ATPase domain|DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|PTHR30153|SM00382|SSF48024|SSF52540|TIGR00665 NIDE_RS19305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001754|IPR011060|IPR013785|IPR014732 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase|Orotidine 5'-phosphate decarboxylase domain|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0008152|GO:0044205 G3DSA:3.20.20.70|MF_01200_B|PF00215|PTHR32119|PTHR32119:SF2|SM00934|SSF51366|TIGR01740 NIDE_RS19310 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|PTHR33398|SSF46992|TIGR00029 NIDE_RS19315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005790|IPR008921|IPR010372|IPR027417 DNA polymerase III delta, N-terminal|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.20|G3DSA:3.40.50.300|PF06144|PTHR34388|SSF48019|SSF52540|TIGR01128 NIDE_RS19320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PF04390 NIDE_RS19325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR015413|IPR025709 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class Ia|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Leucyl tRNA synthetase|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF09334|PF13603|PR00985|PTHR11946|PTHR11946:SF7|SSF47323|SSF50677|SSF52374|TIGR00396 NIDE_RS19330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023576|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|UbiE/COQ5 methyltransferase, conserved site GO:0008168 G3DSA:3.40.50.150|PF13489|PS01184|PTHR10108|PTHR10108:SF750|SSF53335 NIDE_RS19340 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF7|SSF56784 NIDE_RS19345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005225|IPR006073|IPR015946|IPR016484|IPR027417|IPR032859 GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PF14714|PIRSF006485|PR00326|PTHR11649|PTHR11649:SF5|SSF52540|TIGR00231|TIGR03594 NIDE_RS19350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:3.30.450.20 NIDE_RS19360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF24|SSF88659|SSF88946|TIGR02937 NIDE_RS19365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027383 Putative zinc-finger PF13490 NIDE_RS19375 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13384|SSF46689|SSF53098 NIDE_RS19385 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013229 PEGA PF08308 NIDE_RS19390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF582|SM00829|SSF50129|SSF51735 NIDE_RS19395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001287|IPR008972|IPR011707 Cupredoxin|Multicopper oxidase, type 3|Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 G3DSA:2.60.40.420|PF07732|PR00695|PTHR11709|PTHR11709:SF84|SSF49503 NIDE_RS19400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PTHR11014|PTHR11014:SF72|SSF53187 NIDE_RS19410 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PTHR22981|PTHR22981:SF70|SSF48179|SSF51735 NIDE_RS19420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 PF07642|SSF56935 NIDE_RS19425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 G3DSA:3.40.50.700|PF01058|PTHR11995|PTHR11995:SF3|SSF56770 NIDE_RS19430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001135|IPR001268|IPR020396|IPR029014 NADH-quinone oxidoreductase, subunit D|NADH:ubiquinone oxidoreductase, 30kDa subunit|NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site|NiFe hydrogenase-like GO:0008137|GO:0016651|GO:0048038|GO:0051287|GO:0055114 G3DSA:1.10.645.10|PD001581|PF00329|PF00346|PS00542|PTHR11993|PTHR11993:SF16|SSF143243|SSF56762 NIDE_RS19435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001750|IPR003918 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PF00361|PR01437|PTHR22773|PTHR22773:SF56 NIDE_RS19440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PD037531|PTHR38601|PTHR38601:SF1 NIDE_RS19445 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 PF00146|PTHR11432|PTHR11432:SF1 NIDE_RS19450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001750|IPR003918 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PF00361|PR01437|PTHR22773|PTHR22773:SF91 NIDE_RS19460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013784|IPR014766|IPR029413 Carbohydrate-binding-like fold|Carboxypeptidase, regulatory domain|Rhamnogalacturonan lyase, domain II GO:0030246 G3DSA:2.60.40.1120|PF14686|SSF49452 NIDE_RS19465 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 NIDE_RS19470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 NIDE_RS19475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08448|PR00344|PTHR24423|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS19480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR011527|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PTHR24221|PTHR24221:SF161|SM00382|SSF52540|SSF90123 NIDE_RS19490 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF57863 NIDE_RS19495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011460 Protein of unknown function DUF1566 PF07603 NIDE_RS19505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008915 Peptidase M50 GO:0004222|GO:0006508 PF02163|PTHR31412 NIDE_RS19510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001279|IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Metallo-beta-lactamase GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:3.60.15.10|PF00753|PF13560|PTHR11935|SM00530|SM00849|SSF47413|SSF56281 NIDE_RS19515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal GO:0003824|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PTHR11851|PTHR11851:SF140|SSF63411 NIDE_RS19520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal GO:0003824|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PTHR11851|PTHR11851:SF136|SSF63411 NIDE_RS19525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF14|SSF56784|TIGR01509|TIGR01549 NIDE_RS19535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001697|IPR011037|IPR015793|IPR015794|IPR015795|IPR015806|IPR015813|IPR018209 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, active site|Pyruvate kinase, alpha/beta|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|PTHR11817|SSF50800|SSF51621|SSF52935|TIGR01064 NIDE_RS19540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000023|IPR022953|IPR029033 ATP-dependent 6-phosphofructokinase|Histidine phosphatase superfamily|Phosphofructokinase domain GO:0003872|GO:0006002|GO:0006096 G3DSA:3.40.50.1240|G3DSA:3.40.50.450|PF00365|PR00476|PTHR13697|PTHR13697:SF2|SSF53254|SSF53784 NIDE_RS19555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009282|IPR027405 Protein of unknown function DUF937|YidB-like G3DSA:1.10.10.690|PF06078|SSF140804 NIDE_RS19565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004639|IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0003824|GO:0008483|GO:0030170|GO:0033014|GO:0042286 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00375|PF00202|PTHR11986|PTHR11986:SF5|SSF53383|TIGR00713 NIDE_RS19580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|SSF143120|TIGR01552 NIDE_RS19585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|PTHR38813|PTHR38813:SF1|SSF143011 NIDE_RS19595 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|PTHR13256:SF19|SSF55729 NIDE_RS19610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 G3DSA:3.40.80.10|PF01510|PTHR30417|SM00644|SSF55846 NIDE_RS19620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|PTHR11852|PTHR11852:SF0|SSF52266 NIDE_RS19630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006683|IPR006684|IPR029069 Acyl-CoA thioester hydrolase YbgC/YbaW family|HotDog domain|Thioesterase domain GO:0016787 G3DSA:3.10.129.10|PF03061|PIRSF003230|PTHR31793|PTHR31793:SF9|SSF54637|TIGR00051 NIDE_RS19635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012657 23S rRNA-intervening sequence protein G3DSA:1.20.1440.60|PF05635|PTHR38471|PTHR38471:SF2|SSF158446|TIGR02436 NIDE_RS19640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014082 CRISPR-associated protein, Cas02710 PF09670|TIGR02710 NIDE_RS19645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002810|IPR012340 NfeD-like, C-terminal domain|Nucleic acid-binding, OB-fold G3DSA:2.40.50.140|PF01957|PTHR33507|PTHR33507:SF3|SSF141322 NIDE_RS19650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001107|IPR001972|IPR032435 Band 7 domain|Band 7, C-terminal extension|Stomatin family GO:0016020 PF01145|PF16200|PR00721|PTHR10264|PTHR10264:SF27|SM00244|SSF117892 NIDE_RS19655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001347|IPR004515 Phosphoheptose isomerase|Sugar isomerase (SIS) GO:0005737|GO:0005975|GO:0008968|GO:0030246 G3DSA:3.40.50.10490|MF_00067|PF13580|PTHR30390|PTHR30390:SF6|SSF53697 NIDE_RS19670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001126|IPR017961|IPR022880|IPR024728 DNA polymerase IV|DNA polymerase type-Y, HhH motif|DNA polymerase, Y-family, little finger domain|UmuC domain GO:0003684|GO:0003887|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|MF_01113|PF00817|PF11798|PF11799|PTHR11076|SSF100879|SSF56672 NIDE_RS19675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004821|IPR011914|IPR014729 Cytidyltransferase-like domain|RfaE bifunctional protein, domain II|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0005975|GO:0009058|GO:0016773|GO:0016779 G3DSA:3.40.50.620|PF01467|PTHR10739|PTHR10739:SF26|SSF52374|TIGR00125|TIGR02199 NIDE_RS19680 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417 CarD-like/TRCF domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transcription-repair coupling factor|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|MF_00969|PF00270|PF00271|PF02559|PF03461|PTHR14025|PTHR14025:SF21|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540|TIGR00580 NIDE_RS19690 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000297|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Trigger factor/SurA domain GO:0016853 G3DSA:3.10.50.40|PF00639|PF13624|PTHR10657|PTHR10657:SF11|SSF109998|SSF54534 NIDE_RS19695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000297|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Trigger factor/SurA domain GO:0016853 G3DSA:3.10.50.40|PF13145|PF13624|PTHR10657|PTHR10657:SF11|SSF109998|SSF54534 NIDE_RS19700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006073|IPR019987|IPR027417 GTP binding domain|GTP-binding protein, ribosome biogenesis, YsxC|P-loop containing nucleoside triphosphate hydrolase GO:0000917|GO:0005525 G3DSA:3.40.50.300|MF_00321|PF01926|PTHR11649|SSF52540|TIGR03598 NIDE_RS19705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001264|IPR011812|IPR023346 Glycosyl transferase, family 51|Lysozyme-like domain|Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 G3DSA:1.10.3810.10|PF00912|PTHR30400|PTHR30400:SF0|SSF53955|TIGR02070 NIDE_RS19710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR39434|PTHR39434:SF1|SSF54593 NIDE_RS19715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000246|IPR029055 Nucleophile aminohydrolases, N-terminal|Peptidase T2, asparaginase 2 GO:0016787 PF01112|PTHR10188|PTHR10188:SF17|SSF56235 NIDE_RS19725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003732|IPR023509 D-Tyr tRNAtyr deacylase-like domain|D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 G3DSA:3.50.80.10|MF_00518|PF02580|PTHR10472|SSF69500|TIGR00256 NIDE_RS19730 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001497|IPR008332|IPR011991|IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|PF01035|PS00374|PTHR10815|PTHR10815:SF5|SSF46767|SSF53155|TIGR00589 NIDE_RS19735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ PF03023|PIRSF002869|PR01806|PTHR11206|PTHR11206:SF90|TIGR01695 NIDE_RS19750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000515|IPR007621 ABC transporter type 1, transmembrane domain MetI-like|TPM domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF04536|PTHR30373|PTHR30373:SF2 NIDE_RS19755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007156|IPR023353 LemA|LemA-like domain G3DSA:1.20.1440.20|PF04011|PTHR34478|PTHR34478:SF2|SSF140478 NIDE_RS19765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS19770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004808|IPR005135|IPR020847 AP endonuclease 1|AP endonuclease 1, binding site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00726|PTHR22748|PTHR22748:SF7|SSF56219|TIGR00195|TIGR00633 NIDE_RS19780 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010920 LSM domain G3DSA:2.30.30.60|SSF50182 NIDE_RS19795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002151|IPR011990|IPR019734 Kinesin light chain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0003777|GO:0005515|GO:0005871 G3DSA:1.25.40.10|PF13424|PR00381|PTHR19959|SM00028|SSF48452 NIDE_RS19800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004099|IPR012999|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF20|SSF51905|SSF55424 NIDE_RS19805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023387 DUF1653-like domain G3DSA:2.30.30.320|PF07866 NIDE_RS19810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013978 MEKHLA PF08670 NIDE_RS19825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001030|IPR004430|IPR015931|IPR015932|IPR015937|IPR018136 3-isopropylmalate dehydratase, large subunit|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/isopropylmalate dehydratase GO:0003861|GO:0008152|GO:0009098|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.40.1060.10|MF_01026|PF00330|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF38|SSF53732|TIGR00170 NIDE_RS19830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000573|IPR004431|IPR015928|IPR015937 3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase GO:0003861|GO:0008152|GO:0009098|GO:0009316 G3DSA:3.20.19.10|MF_01031|PF00694|PTHR11670|PTHR11670:SF27|SSF52016|TIGR00171 NIDE_RS19840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002523|IPR004488 Magnesium/cobalt transport protein CorA|Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|G3DSA:3.30.460.20|PF01544|PTHR21535|PTHR21535:SF33|SSF143865|SSF144083|TIGR00383 NIDE_RS19845 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000760|IPR020550|IPR020583 Inositol monophosphatase|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site GO:0046854 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PS00629|PS00630|PTHR20854|SSF56655 NIDE_RS19850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PTHR22981|SSF48179|SSF51735 NIDE_RS19860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF428|SSF53383 NIDE_RS19865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|PTHR21666|SSF53955 NIDE_RS19880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003781|IPR016040 CoA-binding|NAD(P)-binding domain GO:0048037 G3DSA:3.40.50.720|PF13380|PTHR33303|SM00881|SSF51735 NIDE_RS19885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002569|IPR028427 Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MsrA GO:0006979|GO:0008113|GO:0016671|GO:0030091|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|PTHR10173|PTHR10173:SF6|SSF55068|TIGR00401 NIDE_RS19895 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:3.40.50.450|PTHR31223|PTHR31223:SF22|SSF102405 NIDE_RS19900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 NIDE_RS19905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PTHR23083|SM00028|SSF48452 NIDE_RS19915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PF01523|PTHR30624|PTHR30624:SF8|SSF111283 NIDE_RS19920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PF01523|PTHR30624|PTHR30624:SF10|SSF111283 NIDE_RS19925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PTHR40663|PTHR40663:SF2|SSF46785 NIDE_RS19935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010721 Protein of unknown function DUF1295 PF06966|PTHR32251 NIDE_RS19940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008168|IPR009056 Cytochrome c, class IC|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PR00605|SSF46626 NIDE_RS19945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005913|IPR016040|IPR029903 NAD(P)-binding domain|RmlD-like substrate binding domain|dTDP-4-dehydrorhamnose reductase family G3DSA:3.40.50.720|PF04321|PTHR10491|SSF51735 NIDE_RS19950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|PTHR12126|PTHR12126:SF1|SSF51735 NIDE_RS19955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 NIDE_RS19960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003439|IPR003593|IPR017871|IPR022374|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, ATP-binding protein, ChvD|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PTHR19211|PTHR19211:SF7|SM00382|SSF52540|TIGR03719 NIDE_RS19965 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007461 Ysc84 actin-binding domain PF04366|PTHR15629 NIDE_RS19970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012349|IPR019595 Domain of unknown function DUF2470|FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|G3DSA:3.20.180.10|PF10615|PF13883|PTHR13343|SSF50475 NIDE_RS19980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003140|IPR029058 Alpha/Beta hydrolase fold|Phospholipase/carboxylesterase/thioesterase GO:0016787 G3DSA:3.40.50.1820|PF02230|PTHR10655|PTHR10655:SF17|SSF53474 NIDE_RS19990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003846 Uncharacterised protein family UPF0061 MF_00692|PF02696|PTHR32057 NIDE_RS19995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018745 Domain of unknown function DUF2294 PF10057 NIDE_RS20000 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001516|IPR001750 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PF00361|PF00662|PR01434|PTHR22773|PTHR22773:SF50 NIDE_RS20010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018752 Uncharacterised protein family UPF0753 MF_01871|PF10070|PTHR38344|PTHR38344:SF1 NIDE_RS20015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003793|IPR011322|IPR015867 Domain of unknown function DUF190|Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal G3DSA:3.30.70.120|PF02641|SSF54913 NIDE_RS20025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002716|IPR029060 PIN domain|PIN domain-like G3DSA:3.40.50.1010|PF01850|SSF88723 NIDE_RS20030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010985|IPR013321 Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|SSF47598 NIDE_RS20040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001440|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF13414|PF13432|PTHR23083|SM00028|SSF48452 NIDE_RS20045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 PF02511|SSF69796 NIDE_RS20050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004154|IPR004516|IPR015807 Anticodon-binding|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0004821|GO:0005524|GO:0005737|GO:0006427 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF03129|PF13393|PIRSF001549|PTHR11476|PTHR11476:SF9|SSF52954|SSF55681|TIGR00442 NIDE_RS20070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007922 Protein of unknown function DUF721/UPF0232 PF05258|PTHR36456 NIDE_RS20075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic SSF116734 NIDE_RS20085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR011712|IPR016040 Histidine kinase-like ATPase, C-terminal domain|NAD(P)-binding domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|G3DSA:3.40.50.720|PF02518|PF07730|PTHR24421|PTHR24421:SF23|SM00387|SSF51735|SSF55874 NIDE_RS20090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 NIDE_RS20095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004211 Recombination endonuclease VII PF02945|SSF54060 NIDE_RS20100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 G3DSA:3.40.50.1400|PF01903|SSF53800 NIDE_RS20105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008638|IPR011050|IPR012334 Filamentous haemagglutinin, N-terminal|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05860|PTHR12338|PTHR12338:SF6|SM00912|SSF51126|TIGR01901 NIDE_RS20110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PTHR12231|SM00450|SSF52821 NIDE_RS20115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR003661|IPR004358|IPR007891 CHASE3|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF05227|PR00344|PTHR24423|PTHR24423:SF383|SM00387|SM00388|SSF47384|SSF55874 NIDE_RS20120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010226|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 G3DSA:1.10.1060.10|MF_01351|PF12838|PS00198|PTHR10849|PTHR10849:SF13|SSF54862|TIGR01971 NIDE_RS20125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|PTHR30329|PTHR30329:SF4|SSF103088 NIDE_RS20140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 NIDE_RS20145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|PTHR30329|PTHR30329:SF4|SSF103088 NIDE_RS20150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002110|IPR011990|IPR019734|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:1.25.40.20|PF12796|PF13414|PF13432|PF13637|PR01415|PTHR24198|SM00028|SM00248|SSF48403|SSF48452 NIDE_RS20155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR36699|SSF141523 NIDE_RS20160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|PIRSF003078|PTHR31760|PTHR31760:SF0|SSF53335|TIGR00138 NIDE_RS20165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000160|IPR001789|IPR011006|IPR029787 CheY-like superfamily|GGDEF domain|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00990|PTHR10799|PTHR10799:SF774|SM00267|SM00448|SSF52172|SSF55073|TIGR00254 NIDE_RS20170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002197|IPR009057 DNA binding HTH domain, Fis-type|Homeodomain-like GO:0003677|GO:0043565 G3DSA:1.10.10.60|PF02954|PR01590|SSF46689 NIDE_RS20175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PTHR30128|PTHR30128:SF18|SSF103088 NIDE_RS20180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023485 Phosphotyrosine protein phosphatase I superfamily G3DSA:3.40.50.270|PF01451|SM00226|SSF52788 NIDE_RS20185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR001789|IPR003018|IPR003594|IPR003661|IPR004358|IPR011006|IPR013656|IPR013767|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF01590|PF02518|PF08448|PR00344|PTHR24423|SM00065|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55781|SSF55785|SSF55874|TIGR00229 NIDE_RS20190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013767 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF02518|PF13426|PR00344|PTHR24423|PTHR24423:SF382|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 NIDE_RS20195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655|IPR013767 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF02518|PF08447|PF13426|PR00344|PTHR24423|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 NIDE_RS20200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR005143|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription factor LuxR-like, autoinducer-binding domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.80|PF00196|PF03472|PR00038|PS00622|PTHR26402|PTHR26402:SF102|SM00421|SSF46894|SSF75516 NIDE_RS20205 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR23091|SSF55729 NIDE_RS20210 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|PTHR33446|PTHR33446:SF2|SSF74653|TIGR01352 NIDE_RS20215 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000983|IPR012902 Bacterial general secretion pathway protein G-type pilin|Prokaryotic N-terminal methylation site GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF13544|PR00813|PTHR30093|SSF54523|TIGR02532 NIDE_RS20220 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR003018|IPR003594|IPR003660|IPR003661|IPR004358|IPR011006|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00672|PF02518|PF13185|PR00344|PTHR24423|PTHR24423:SF544|SM00065|SM00304|SM00387|SM00388|SM00448|SSF158472|SSF47384|SSF52172|SSF55781|SSF55874 NIDE_RS20225 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PS01081|PTHR30055|SSF46689|SSF48498 NIDE_RS20230 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 NIDE_RS20240 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR001789|IPR003018|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006|IPR013655|IPR013767|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF01590|PF01627|PF02518|PF08447|PR00344|PTHR24423|SM00065|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55781|SSF55785|SSF55874|TIGR00229 NIDE_RS20245 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PR00344|PTHR24423|PTHR24423:SF382|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS20250 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005500|IPR023203 Protein of unknown function DUF309|TTHA0068-like domain G3DSA:1.10.3450.10|PF03745|SSF140663 NIDE_RS20255 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR001789|IPR003018|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006|IPR013656|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01590|PF01627|PF02518|PF08448|PF13188|PF13426|PR00344|PTHR24423|PTHR24423:SF382|SM00065|SM00073|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55781|SSF55785|SSF55874|TIGR00229 NIDE_RS20260 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR017689 Outer membrane protein assembly factor BamD|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13525|PTHR37423|SSF48452|TIGR03302 NIDE_RS20265 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654 NIDE_RS20270 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 NIDE_RS20280 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR003594|IPR004358|IPR011712|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-4|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0016021|GO:0016310|GO:0016772|GO:0046983 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF02518|PF07730|PF08448|PF13426|PR00344|PTHR24421|PTHR24421:SF1|SM00086|SM00091|SM00387|SSF55785|SSF55874|TIGR00229 NIDE_RS20285 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PTHR30128|SSF103088 NIDE_RS20290 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002078|IPR003593|IPR007890|IPR009057|IPR027417 AAA+ ATPase domain|CHASE2|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain GO:0003677|GO:0005524|GO:0006355|GO:0008134 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF05226|PTHR32071|SM00382|SM01080|SSF52540 NIDE_RS20295 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001353|IPR029055 Nucleophile aminohydrolases, N-terminal|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 G3DSA:3.60.20.10|PF00227|SSF56235 NIDE_RS20300 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF13487|SM00471|SSF109604 NIDE_RS20305 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007329 FMN-binding GO:0010181|GO:0016020 PF04205|SM00900 NIDE_RS20315 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR001789|IPR003018|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006|IPR013655|IPR013656|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01590|PF01627|PF02518|PF08447|PF08448|PF13426|PR00344|PTHR24423|SM00065|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55781|SSF55785|SSF55874|TIGR00229 NIDE_RS20320 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PTHR26402|PTHR26402:SF590|SM00421|SSF46894 NIDE_RS20325 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:1.10.150.320|G3DSA:1.20.5.170|SSF81585 NIDE_RS20330 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001940|IPR005532|IPR009003|IPR016187 C-type lectin fold|Peptidase S1, PA clan|Peptidase S1C|Sulfatase-modifying factor enzyme GO:0004252|GO:0006508 G3DSA:2.40.10.10|G3DSA:3.90.1580.10|PF03781|PF13365|PR00834|PTHR23150|SSF50494|SSF56436 NIDE_RS20335 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001623 DnaJ domain G3DSA:1.10.287.110|PF00226|PR00625|PTHR24078|SM00271|SSF46565 NIDE_RS20340 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PTHR10366|PTHR10366:SF430|SSF51735 NIDE_RS20345 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|SSF52402 NIDE_RS20350 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003961|IPR013783 Fibronectin type III|Immunoglobulin-like fold GO:0005515 G3DSA:2.60.40.10|PF00041|PR01217|SM00060|SSF49265 NIDE_RS20355 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain G3DSA:2.40.40.10|PF03330|PTHR34183|PTHR34183:SF2|SSF50685|TIGR00413 NIDE_RS20360 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|PF00573|PTHR10746|SSF52166 NIDE_RS20365 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005653 Organic solvent tolerance-like, N-terminal G3DSA:2.60.450.10|PF03968 NIDE_RS20370 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001775|IPR004845|IPR004846|IPR005644|IPR013355|IPR021731 AMIN domain|GspD/PilQ family|NolW-like|Type II secretion system GspD, conserved site|Type II/III secretion system|Type IV pilus secretin PilQ GO:0008565|GO:0009297|GO:0009306 PF00263|PF03958|PF11741|PR00811|PR01032|PS00875|PTHR30604|TIGR02515 NIDE_RS20380 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PTHR10681|SSF52833 NIDE_RS20390 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005234|IPR011991 Chromosome segregation/condensation protein ScpB|Winged helix-turn-helix DNA-binding domain GO:0051304 G3DSA:1.10.10.10|MF_01804|PF04079|PTHR34298|PTHR34298:SF2|SSF46785|TIGR00281 NIDE_RS20395 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001258|IPR003961|IPR011042|IPR013783 Fibronectin type III|Immunoglobulin-like fold|NHL repeat|Six-bladed beta-propeller, TolB-like GO:0005515 G3DSA:2.120.10.30|G3DSA:2.60.40.10|PF01436|PTHR24103|PTHR24103:SF378|SM00060|SSF101898|SSF49265 NIDE_RS20400 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004658 Outer membrane lipoprotein Slp GO:0019867 PF03843|PTHR37530 NIDE_RS20405 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PF04116|PTHR21624|PTHR21624:SF2 NIDE_RS20415 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR011006|IPR011712|IPR013656|IPR013767 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-4|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0006355|GO:0016021|GO:0046983 G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00989|PF02518|PF07730|PF08448|PF13426|PTHR24423|SM00086|SM00091|SM00387|SM00448|SSF52172|SSF55785|SSF55874|TIGR00229 NIDE_RS20420 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR003661|IPR004358|IPR033479 Double Cache domain 1|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF02743|PR00344|PTHR24423|PTHR24423:SF518|SM00387|SM00388|SSF47384|SSF55874 NIDE_RS20425 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000719|IPR008271|IPR011009|IPR017441 Protein kinase domain|Protein kinase, ATP binding site|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00107|PS00108|PTHR24362|PTHR24362:SF160|SM00220|SSF56112 NIDE_RS20430 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006156|IPR006157|IPR015985|IPR029063 Dihydroneopterin aldolase|Dihydroneopterin aldolase/epimerase domain|S-adenosyl-L-methionine-dependent methyltransferase|Tellurite resistance methyltransferase TehB-like domain GO:0004150|GO:0006760 G3DSA:3.30.1130.10|G3DSA:3.40.50.150|PF02152|PF03848|PTHR20941|PTHR20941:SF3|SM00905|SSF53335|SSF55620|TIGR00525|TIGR00526 NIDE_RS20435 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR003661|IPR004358|IPR029016 GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF445|SM00387|SM00388|SSF47384|SSF55781|SSF55874 NIDE_RS20440 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013783|IPR014756|IPR032640 AMP-activated protein kinase, glycogen-binding domain|Immunoglobulin E-set|Immunoglobulin-like fold G3DSA:2.60.40.10|PF16561|SSF81296 NIDE_RS20445 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013783|IPR014756|IPR032640 AMP-activated protein kinase, glycogen-binding domain|Immunoglobulin E-set|Immunoglobulin-like fold G3DSA:2.60.40.10|PF16561|SSF81296 NIDE_RS20450 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PTHR12697|PTHR12697:SF5|SM00567|SSF48371 NIDE_RS20455 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002151|IPR011990|IPR019734 Kinesin light chain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0003777|GO:0005515|GO:0005871 G3DSA:1.25.40.10|PF13374|PF13424|PR00381|PTHR19959|SM00028|SSF48452 NIDE_RS20460 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025991 Chemoreceptor zinc-binding domain PF13682 NIDE_RS20470 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340|PTHR30007|PTHR30007:SF0 NIDE_RS20475 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000095|IPR003961|IPR013783 CRIB domain|Fibronectin type III|Immunoglobulin-like fold GO:0005515 G3DSA:2.60.40.10|G3DSA:3.90.810.10|PR01217|SSF49265 NIDE_RS20480 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011545|IPR014001|IPR027417 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|SM00487|SSF52540 NIDE_RS20495 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 PF01184 NIDE_RS20500 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|PTHR31964:SF45|SSF52402 NIDE_RS20505 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734|IPR024983 CHAT domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF12770|PF13424|PTHR10098|PTHR10098:SF104|SM00028|SSF48452 NIDE_RS20510 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017734 Type VI secretion system, lipoprotein SciN PF12790|PTHR37625|TIGR03352 NIDE_RS20515 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002196|IPR023346|IPR023347 Glycoside hydrolase, family 24|Lysozyme domain|Lysozyme-like domain GO:0003796|GO:0009253|GO:0016998 G3DSA:1.10.530.40|PF00959|PTHR38107|PTHR38107:SF2|SSF53955 NIDE_RS20520 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009739 Protein of unknown function DUF1311 PF07007 NIDE_RS20525 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007048|IPR017737 GpW/Gp25/anti-adapter protein IraD|Type VI secretion system, lysozyme-related protein G3DSA:3.10.450.40|PF04965|PTHR38595|PTHR38595:SF2|SSF160719|TIGR03357 NIDE_RS20530 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016039 Thiolase-like GO:0003824|GO:0008152 SSF53901 NIDE_RS20535 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000719|IPR008271|IPR011009 Protein kinase domain|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00108|PTHR24362|PTHR24362:SF160|SM00220|SSF56112 NIDE_RS20540 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000719|IPR008271|IPR011009 Protein kinase domain|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00108|PTHR24362|PTHR24362:SF160|SM00220|SSF56112 NIDE_RS20545 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734|IPR024983 CHAT domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF12770|PF13424|SM00028|SSF48452 NIDE_RS20550 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000878|IPR003043|IPR003754|IPR006366|IPR014776|IPR014777 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0004852|GO:0006779|GO:0008152|GO:0008168|GO:0033014|GO:0055114 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.10090|PF00590|PF02602|PS00839|PS00840|PTHR21091|PTHR21091:SF16|SSF53790|SSF69618|TIGR01469 NIDE_RS20555 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR018076 Type II secretion system F domain PF00482|PTHR35007|PTHR35007:SF1 NIDE_RS20560 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013974|IPR017592|IPR031571 Flp pilus assembly protein RcpC/CpaB domain|Pilus assembly, Flp-type CpaB|SAF domain PF08666|PF16976|SM00858|TIGR03177 NIDE_RS20565 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000873|IPR001242|IPR003819|IPR006162|IPR009081|IPR010071|IPR020806|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Amino acid adenylation domain|Condensation domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain|TauD/TfdA-like domain GO:0003824|GO:0008152|GO:0016491|GO:0031177|GO:0055114 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|G3DSA:3.60.130.10|PF00501|PF00550|PF00668|PF02668|PF13193|PF13745|PS00012|PS00455|PTHR24095|PTHR24095:SF173|SM00823|SSF47336|SSF51197|SSF52777|SSF56801|TIGR01733 NIDE_RS20570 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009057|IPR018060|IPR020449 DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PTHR11019|SM00342|SSF46689 NIDE_RS20580 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|PTHR30383|PTHR30383:SF3|SSF52266 NIDE_RS20585 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025714|IPR029063 Methyltransferase domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13847|PTHR10108|SSF53335 NIDE_RS20590 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025295 Domain of unknown function DUF4157 PF13699 NIDE_RS20595 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025295 Domain of unknown function DUF4157 PF13699 NIDE_RS20600 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025295 Domain of unknown function DUF4157 PF13699 NIDE_RS20605 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006626|IPR011050|IPR012334 Parallel beta-helix repeat|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF13229|SM00710|SSF51126 NIDE_RS20610 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025295 Domain of unknown function DUF4157 PF13699 NIDE_RS20615 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|PTHR17630|PTHR17630:SF42|SSF53474 NIDE_RS20620 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 NIDE_RS20625 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR22572|SSF53448 NIDE_RS20630 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR011990|IPR013216|IPR029044|IPR029063 Glycosyltransferase 2-like|Methyltransferase type 11|Nucleotide-diphospho-sugar transferases|S-adenosyl-L-methionine-dependent methyltransferase|Tetratricopeptide-like helical domain GO:0005515|GO:0008152|GO:0008168 G3DSA:1.25.40.10|G3DSA:3.40.50.150|G3DSA:3.90.550.10|PF00535|PF08241|PF13524|PTHR22916|SSF48452|SSF53335|SSF53448|SSF53756 NIDE_RS20635 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR000971|IPR001610|IPR004089|IPR004090|IPR009050|IPR012292|IPR013655 Chemotaxis methyl-accepting receptor|Globin|Globin-like|Globin/Protoglobin|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAC motif|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020|GO:0019825|GO:0020037 G3DSA:1.10.287.950|G3DSA:1.10.490.10|G3DSA:3.30.450.20|PF00015|PF00042|PF08447|PR00260|PTHR32089|PTHR32089:SF63|SM00086|SM00283|SSF46458|SSF55785|SSF58104|TIGR00229 NIDE_RS20640 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 NIDE_RS20645 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|PTHR12526|SSF53756 NIDE_RS20650 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000715|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016021 PF00953|PS01348|PTHR22926|PTHR22926:SF3 NIDE_RS20655 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|PTHR30570|PTHR30570:SF5|SSF53850 NIDE_RS20660 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004879|IPR008928|IPR012336|IPR012341|IPR023210 Domain of unknown function DUF255|NADP-dependent oxidoreductase domain|Six-hairpin glycosidase|Six-hairpin glycosidase-like|Thioredoxin-like fold GO:0003824 G3DSA:1.50.10.10|G3DSA:3.20.20.100|G3DSA:3.40.30.10|PF00248|PF03190|PTHR12145|PTHR12145:SF11|SSF48208|SSF51430|SSF52833 NIDE_RS20665 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001623 DnaJ domain G3DSA:1.10.287.110|PF00226|SM00271|SSF46565 NIDE_RS20670 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF2|SSF116734 NIDE_RS20675 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001440|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF13432|PTHR23083|SM00028|SSF48452|SSF51197 NIDE_RS20685 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic G3DSA:1.10.150.20 NIDE_RS20690 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002711|IPR003615 HNH endonuclease|HNH nuclease GO:0003676|GO:0004519 PF01844|SM00507 NIDE_RS20695 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF2|SSF116734 NIDE_RS20700 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003607|IPR006674|IPR008207 HD domain|HD/PDEase domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 G3DSA:1.10.3210.10|G3DSA:1.20.120.160|PF01966|SM00471|SSF109604|SSF47226 NIDE_RS20705 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 NIDE_RS20710 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003660|IPR004089|IPR024478 4HB MCP domain|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PTHR32089|SM00283|SM00304|SSF58104 NIDE_RS20715 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|SSF88713 NIDE_RS20720 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|PTHR12526|SSF53756 NIDE_RS20725 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|PTHR32552|PTHR32552:SF26|SSF53098 NIDE_RS20735 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 NIDE_RS20740 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003583|IPR004509|IPR010994 Competence protein ComEA, helix-hairpin-helix domain|Helix-hairpin-helix DNA-binding motif, class 1|RuvA domain 2-like GO:0003677|GO:0006281 G3DSA:1.10.150.280|PF12836|PTHR21180|SM00278|SSF47781|TIGR00426 NIDE_RS20745 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic PF13692|PTHR12526|SSF53756 NIDE_RS20750 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011063|IPR012094|IPR012795|IPR012796|IPR014729|IPR020825 Lysidine-tRNA(Ile) synthetase, C-terminal|Phenylalanyl-tRNA synthetase, B3/B4|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:3.40.50.620|MF_01161|PF01171|PF11734|PTHR11807|PTHR11807:SF2|SM00977|SSF52402|SSF56037|TIGR02432|TIGR02433 NIDE_RS20755 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 NIDE_RS20760 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 NIDE_RS20765 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SSF75005 NIDE_RS20770 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004622|IPR008921|IPR015199|IPR027417 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta prime subunit|DNA polymerase III, delta subunit, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF09115|PF13177|PTHR11669|PTHR11669:SF8|SSF48019|SSF52540|TIGR00678 NIDE_RS20775 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|PTHR14969|SM00014|SSF48317 NIDE_RS20785 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR021383 Protein of unknown function DUF3015 PF11220 NIDE_RS20790 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PTHR33164|SM00347|SSF46785 NIDE_RS20795 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR010298 Protein of unknown function DUF901 PF05991|PTHR34547 NIDE_RS20800 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008397|IPR008929|IPR012480|IPR031680 Alginate lyase domain|Chondroitin AC/alginate lyase|Heparin-sulfate lyase, N-terminal|Heparinase II/III-like GO:0016829|GO:0042597 G3DSA:1.50.10.110|PF07940|PF16889|PTHR39210|SSF48230 NIDE_RS20805 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR011990|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 NIDE_RS20810 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|PTHR10108|PTHR10108:SF739|SSF53335 NIDE_RS20815 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR001789|IPR003018|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF02518|PF08447|PF13185|PR00344|PTHR24423|PTHR24423:SF458|SM00065|SM00086|SM00091|SM00387|SM00448|SSF47384|SSF52172|SSF55781|SSF55785|SSF55874|TIGR00229 NIDE_RS20820 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.60.40.1590|G3DSA:2.70.70.10|PF01551|PTHR21666|SSF51261 NIDE_RS20825 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|PTHR21666:SF213|SSF51261 NIDE_RS20830 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR003594|IPR011712|IPR013656|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-4|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0006355|GO:0016021|GO:0046983 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00989|PF02518|PF07730|PF08448|PF13426|PTHR24423|SM00086|SM00091|SM00387|SSF55785|SSF55874|TIGR00229 NIDE_RS20835 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 PF05818 NIDE_RS20840 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 NIDE_RS20850 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001623|IPR006166|IPR011335|IPR020819 DNA repair nuclease, XPF-type/Helicase|DnaJ domain|ERCC4 domain|Restriction endonuclease type II-like GO:0003677|GO:0004518|GO:0006259 G3DSA:1.10.287.110|G3DSA:3.40.50.10130|PF00226|PF02732|PR00625|PTHR24078|SM00271|SSF46565|SSF52980 NIDE_RS20855 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007055 BON domain PF04972 NIDE_RS20860 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF12895|PTHR23083|SM00028|SSF48452 NIDE_RS20865 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR020945 DMSO/Nitrate reductase chaperone G3DSA:1.10.3480.10|PF02613|SSF89155 NIDE_RS20870 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12838|PS00198|PTHR30176|PTHR30176:SF3|SSF54862 NIDE_RS20875 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF1|SSF53756 NIDE_RS20880 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR014766 Carboxypeptidase, regulatory domain G3DSA:2.60.40.1120 NIDE_RS20885 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417|IPR029016 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|GAF domain|GAF domain-like|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.40|G3DSA:3.40.50.300|PF00158|PF01590|PF02954|PF13185|PS00675|PS00676|PS00688|PTHR32071|SM00065|SM00382|SSF46689|SSF52540|SSF55781 NIDE_RS20890 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13414|PF14559|PTHR23083|SM00028|SSF48452 NIDE_RS20900 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR014162|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Tol-Pal system, YbgF GO:0005515 G3DSA:1.25.40.10|PF13525|PTHR26312|PTHR26312:SF74|SM00028|SSF48452|TIGR02795 NIDE_RS20905 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR011990|IPR014162|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Tol-Pal system, YbgF GO:0005515 G3DSA:1.25.40.10|PF13525|PTHR26312|PTHR26312:SF74|SM00028|SSF48452|TIGR02795 NIDE_RS20910 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006664|IPR006665|IPR014169 OmpA-like domain|Outer membrane protein, bacterial|Peptidoglycan-associated lipoprotein GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PTHR30128|PTHR30128:SF18|SSF103088|TIGR02802 NIDE_RS20915 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF13103|PR01217|SSF74653|TIGR01352 NIDE_RS20920 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR031849 Domain of unknown function DUF5069 PF16798 NIDE_RS20925 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003961|IPR013783 Fibronectin type III|Immunoglobulin-like fold GO:0005515 G3DSA:2.60.40.10|PF00041|SM00060|SSF49265 NIDE_RS20930 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025711 PepSY domain PF03413 NIDE_RS20935 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PF01258|PTHR33823|SSF57716 NIDE_RS20940 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 NIDE_RS20945 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001173|IPR013216|IPR029044|IPR029063 Glycosyltransferase 2-like|Methyltransferase type 11|Nucleotide-diphospho-sugar transferases|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|G3DSA:3.90.550.10|PF00535|PF08241|PF13692|PTHR22916|PTHR22916:SF26|SSF53335|SSF53448|SSF53756 NIDE_RS20950 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012902 Prokaryotic N-terminal methylation site G3DSA:3.30.700.10|PF13633|PS00409|PTHR30093|SSF54523|TIGR02532 NIDE_RS20955 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012902 Prokaryotic N-terminal methylation site G3DSA:3.30.700.10|PF13633|PS00409|PTHR30093|SSF54523|TIGR02532 NIDE_RS20960 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08447|PF08448|PF13426|PR00344|PTHR24423|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 NIDE_RS20970 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001789|IPR003018|IPR003594|IPR003661|IPR004358|IPR011006|IPR013767|IPR029016|IPR029151 CheY-like superfamily|GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Periplasmic sensor domain-like|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF02518|PF13185|PR00344|PTHR24423|PTHR24423:SF458|SM00091|SM00387|SM00388|SM00448|SSF103190|SSF47384|SSF52172|SSF55781|SSF55785|SSF55874|TIGR00229 NIDE_RS20975 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005358|IPR016181|IPR024320 Acyl-CoA N-acyltransferase|Phosphatidylglycerol lysyltransferase, C-terminal|Putative zinc- or iron-chelating domain containing protein G3DSA:3.40.630.30|PF03692|PF09924|PTHR41373|SSF55729 NIDE_RS20980 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003594|IPR003661|IPR004358|IPR016040 Histidine kinase-like ATPase, C-terminal domain|NAD(P)-binding domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.720|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF445|SM00387|SM00388|SSF47384|SSF51735|SSF55874 NIDE_RS20985 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08447|PR00344|PTHR24423|PTHR24423:SF458|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 NIDE_RS20990 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PTHR24188|SM00248|SSF48403 NIDE_RS20995 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR003593|IPR021796|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF3365 G3DSA:3.40.50.300|PF11845|PF13401|PTHR35894|PTHR35894:SF1|SM00382|SSF52540 NIDE_RS21010 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007076 TfoX, N-terminal G3DSA:3.30.1460.30|PF04993|SSF159894 NIDE_RS21015 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR025714|IPR029063 Methyltransferase domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13847|PTHR10108|PTHR10108:SF924|SSF53335 NIDE_RS21020 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002059|IPR003489|IPR011129|IPR012340 Cold shock protein|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold|Ribosomal protein S30Ae/sigma 54 modulation protein GO:0003676|GO:0003677|GO:0006355|GO:0044238 G3DSA:2.40.50.140|G3DSA:3.30.160.100|PF00313|PF02482|SM00357|SSF50249|SSF69754 NIDE_RS21025 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001646|IPR032675 Leucine-rich repeat domain, L domain-like|Pentapeptide repeat G3DSA:3.80.10.10|PF00805|PTHR14136|PTHR14136:SF0|SSF141571 NIDE_RS21030 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS21035 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|PTHR11911:SF68|SM00116|SSF54631 NIDE_RS21040 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008969|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain G3DSA:2.60.40.1120|SSF49464 NIDE_RS21045 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 NIDE_RS21050 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013426|IPR014263|IPR019127|IPR026392 Exosortase EpsH-related|Exosortase, EpsH|Exosortase/Archaeosortase domain|Methanolan biosynthesis EpsI PF09721|PF11984|TIGR02602|TIGR02914|TIGR04178 NIDE_RS21060 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR000792|IPR011991|IPR016032 PAS domain|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.20|PF00196|PF13426|PR00038|PTHR26402|SM00421|SSF46894|SSF55785|TIGR00229 NIDE_RS21065 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR002869|IPR011894|IPR011898|IPR017896|IPR017900|IPR019752 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate|2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016491|GO:0016625|GO:0016903|GO:0051539|GO:0055114 G3DSA:3.30.70.20|G3DSA:3.40.920.10|PF01558|PF12838|PS00198|PTHR32154|PTHR32154:SF2|SSF53323|SSF54862|TIGR02175|TIGR02179 NIDE_RS21070 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR008168|IPR009056 Cytochrome c, class IC|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PR00605|SSF46626 NIDE_RS21075 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001269|IPR013785|IPR018517|IPR024036 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine synthase, putative, C-terminal GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.10.1200.80|G3DSA:3.20.20.70|PF01207|PS01136|PTHR11082|PTHR11082:SF25|SSF51395 NIDE_RS21080 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000644|IPR009875 CBS domain|PilZ domain GO:0035438 G3DSA:3.10.580.10|PF00571|PF07238|PTHR11911|SSF54631 NIDE_RS21085 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001623|IPR004640 Co-chaperone Hsc20|DnaJ domain GO:0006457|GO:0051087 G3DSA:1.10.287.110|PTHR14021|PTHR14021:SF15|SM00271|SSF46565|TIGR00714 NIDE_RS21090 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|SSF103088 NIDE_RS21095 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007115|IPR022470 6-pyruvoyl tetrahydropterin synthase, cysteine active site|6-pyruvoyl tetrahydropterin synthase/QueD family protein GO:0003874|GO:0006729 G3DSA:3.30.479.10|PF01242|PS00987|PTHR12589|SSF55620 NIDE_RS21100 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005358 Putative zinc- or iron-chelating domain containing protein PF03692 NIDE_RS21105 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|PTHR14969|SM00014|SSF48317 NIDE_RS21110 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR012902 Prokaryotic N-terminal methylation site TIGR02532 NIDE_RS21115 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF13646|PTHR12697|PTHR12697:SF18|SM00567|SSF48371 NIDE_RS21120 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF03130|PF13646|PTHR12697|SM00567|SSF48371 NIDE_RS21125 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 NIDE_RS21130 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR22726 NIDE_RS21135 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR029041 FAD-linked oxidoreductase-like G3DSA:3.20.20.220 NIDE_RS21140 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005335 Terminase small subunit GO:0006323 PF03592 NIDE_RS21145 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006597|IPR011990|IPR018306 Bacteriophage T5, Orf172 DNA-binding|Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|PF10544|PTHR11102|SM00671|SM00974|SSF81901 NIDE_RS21150 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000014|IPR001610|IPR001789|IPR003018|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655|IPR013656|IPR013767|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF01590|PF02518|PF08447|PF08448|PF13426|PR00344|PTHR24423|PTHR24423:SF458|SM00065|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55781|SSF55785|SSF55874|TIGR00229 NIDE_RS21155 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 NIDE_RS21160 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000026|IPR016191 Guanine-specific ribonuclease N1/T1/U2|Ribonuclease/ribotoxin GO:0003723|GO:0004521|GO:0004540 G3DSA:3.10.450.30|PF00545|SSF53933 NIDE_RS21165 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR000468 Barstar (barnase inhibitor) G3DSA:3.30.370.10|PF01337|SSF52038 NIDE_RS21170 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|PF00565|PTHR12302|PTHR12302:SF0|SSF50199 NIDE_RS21175 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR005184 Domain of unknown function DUF306, Meta/HslJ PF03724|PTHR35535 NIDE_RS21180 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|SSF52266 NIDE_RS21185 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR006640 SprT-like PF10263|PTHR21220|SM00731 NIDE_RS21190 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR007621 TPM domain PF04536 NIDE_RS21195 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR004864|IPR013783|IPR013990 Immunoglobulin-like fold|Late embryogenesis abundant protein, LEA-14|Water stress and hypersensitive response domain GO:0009269 G3DSA:2.60.40.10|PF03168|SM00769|SSF117070 NIDE_RS21200 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR16138|SSF53474 NIDE_RS21205 /var/genomes/g2d_mirror/Nitrospira_defluvii/ASM19681v1_genomic IPR027396 DsrEFH-like G3DSA:3.40.1260.10|SSF75169