CRH09_RS00005	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CRH09_RS00010	SM00480	DNA polymerase III beta subunit
CRH09_RS00025	SM00387	Histidine kinase-like ATPases
CRH09_RS00025	SM00433	TopoisomeraseII
CRH09_RS00030	SM00434	DNA Topoisomerase IV
CRH09_RS00095	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS00125	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS00150	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CRH09_RS00155	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS00200	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS00200	SM00740	CRH09_RS00200
CRH09_RS00205	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS00220	SM00331	Sigma factor PP2C-like phosphatases
CRH09_RS00220	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CRH09_RS00225	SM00240	Forkhead associated domain
CRH09_RS00230	SM00240	Forkhead associated domain
CRH09_RS00315	SM00830	Chorismate mutase type II
CRH09_RS00330	SM01110	CRH09_RS00330
CRH09_RS00340	SM00855	Phosphoglycerate mutase family
CRH09_RS00400	SM00387	Histidine kinase-like ATPases
CRH09_RS00505	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS00545	SM00450	Rhodanese Homology Domain
CRH09_RS00605	SM00855	Phosphoglycerate mutase family
CRH09_RS00640	SM00052	Putative diguanylate phosphodiesterase
CRH09_RS00640	SM00267	diguanylate cyclase
CRH09_RS00675	SM00563	Phosphate acyltransferases
CRH09_RS00680	SM00563	Phosphate acyltransferases
CRH09_RS00710	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS00730	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CRH09_RS00740	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS00750	SM00422	helix_turn_helix, mercury resistance
CRH09_RS00775	SM00014	Acid phosphatase homologues
CRH09_RS00820	SM01110	CRH09_RS00820
CRH09_RS00835	SM00823	Phosphopantetheine attachment site
CRH09_RS00835	SM00825	Beta-ketoacyl synthase
CRH09_RS00835	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS00890	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CRH09_RS00910	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS00975	SM00857	Resolvase, N terminal domain
CRH09_RS00990	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS01010	SM00829	Enoylreductase
CRH09_RS01020	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS01110	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS01115	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS01160	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CRH09_RS01190	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS01230	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS01235	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS01375	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS01400	SM00267	diguanylate cyclase
CRH09_RS01430	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS01480	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH09_RS01485	SM00758	CRH09_RS01485
CRH09_RS01570	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS01630	SM00487	DEAD-like helicases superfamily
CRH09_RS01645	SM00507	HNH nucleases
CRH09_RS01650	SM00470	ParB-like nuclease domain
CRH09_RS01705	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CRH09_RS01785	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CRH09_RS01870	SM00954	Region found in RelA / SpoT proteins
CRH09_RS01975	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS02000	SM00062	Bacterial periplasmic substrate-binding proteins
CRH09_RS02005	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS02055	SM00903	Flavin reductase like domain
CRH09_RS02065	SM00822	CRH09_RS02065
CRH09_RS02075	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS02100	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS02195	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS02200	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
CRH09_RS02225	SM00493	CRH09_RS02225
CRH09_RS02255	SM00917	LeuA allosteric (dimerisation) domain
CRH09_RS02335	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS02350	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CRH09_RS02370	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS02375	SM00028	Tetratricopeptide repeats
CRH09_RS02385	SM01060	CRH09_RS02385
CRH09_RS02395	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS02450	SM00822	CRH09_RS02450
CRH09_RS02465	SM00226	Low molecular weight phosphatase family
CRH09_RS02495	SM00823	Phosphopantetheine attachment site
CRH09_RS02525	SM00740	CRH09_RS02525
CRH09_RS02555	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS02560	SM00100	Cyclic nucleotide-monophosphate binding domain
CRH09_RS02560	SM00419	helix_turn_helix, cAMP Regulatory protein
CRH09_RS02570	SM00478	endonuclease III
CRH09_RS02570	SM00525	CRH09_RS02570
CRH09_RS02625	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS02675	SM00487	DEAD-like helicases superfamily
CRH09_RS02675	SM00490	helicase superfamily c-terminal domain
CRH09_RS02680	SM00357	Cold shock protein domain
CRH09_RS02685	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CRH09_RS02685	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CRH09_RS02685	SM00493	CRH09_RS02685
CRH09_RS02695	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS02740	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS02755	SM00822	CRH09_RS02755
CRH09_RS02780	SM00903	Flavin reductase like domain
CRH09_RS02800	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS02800	SM01043	Bacterial transcriptional activator domain
CRH09_RS02845	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS02895	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS02910	SM00905	Dihydroneopterin aldolase
CRH09_RS02955	SM00450	Rhodanese Homology Domain
CRH09_RS02970	SM00240	Forkhead associated domain
CRH09_RS02970	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS02980	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS02980	SM01086	C-terminal, D2-small domain, of ClpB protein
CRH09_RS02995	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS02995	SM00448	cheY-homologous receiver domain
CRH09_RS03005	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS03050	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CRH09_RS03055	SM00840	CRH09_RS03055
CRH09_RS03070	SM01058	CarD-like/TRCF domain
CRH09_RS03080	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS03095	SM00947	Carbonic anhydrase
CRH09_RS03100	SM00478	endonuclease III
CRH09_RS03110	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS03200	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CRH09_RS03255	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS03265	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS03275	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS03300	SM00903	Flavin reductase like domain
CRH09_RS03415	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CRH09_RS03430	SM00882	Coenzyme A transferase
CRH09_RS03440	SM00822	CRH09_RS03440
CRH09_RS03445	SM00822	CRH09_RS03445
CRH09_RS03555	SM00822	CRH09_RS03555
CRH09_RS03620	SM00923	MbtH-like protein
CRH09_RS03630	SM00448	cheY-homologous receiver domain
CRH09_RS03630	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS03635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS03635	SM00387	Histidine kinase-like ATPases
CRH09_RS03635	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS03645	SM01209	CRH09_RS03645
CRH09_RS03645	SM01210	CRH09_RS03645
CRH09_RS03665	SM00998	Adenylosuccinate lyase C-terminus
CRH09_RS03715	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS03725	SM01211	CRH09_RS03725
CRH09_RS03735	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS03795	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS03850	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS03855	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS03870	SM00450	Rhodanese Homology Domain
CRH09_RS03890	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS03915	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS03985	SM00563	Phosphate acyltransferases
CRH09_RS03990	SM00563	Phosphate acyltransferases
CRH09_RS04040	SM00354	helix_turn _helix lactose operon repressor
CRH09_RS04050	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS04075	SM00487	DEAD-like helicases superfamily
CRH09_RS04075	SM00490	helicase superfamily c-terminal domain
CRH09_RS04120	SM00357	Cold shock protein domain
CRH09_RS04160	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS04245	SM00387	Histidine kinase-like ATPases
CRH09_RS04245	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS04250	SM00448	cheY-homologous receiver domain
CRH09_RS04250	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS04265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS04265	SM00387	Histidine kinase-like ATPases
CRH09_RS04270	SM00960	Roadblock/LC7 domain
CRH09_RS04300	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS04355	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS04365	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS04430	SM00062	Bacterial periplasmic substrate-binding proteins
CRH09_RS04445	SM00331	Sigma factor PP2C-like phosphatases
CRH09_RS04445	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CRH09_RS04450	SM00327	von Willebrand factor (vWF) type A domain
CRH09_RS04455	SM00240	Forkhead associated domain
CRH09_RS04465	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS04610	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS04625	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS04645	SM00984	UDP binding domain
CRH09_RS04715	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS04790	SM00470	ParB-like nuclease domain
CRH09_RS04805	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS04805	SM00448	cheY-homologous receiver domain
CRH09_RS04810	SM00387	Histidine kinase-like ATPases
CRH09_RS04815	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS04815	SM01043	Bacterial transcriptional activator domain
CRH09_RS04855	SM00825	Beta-ketoacyl synthase
CRH09_RS04940	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS04945	SM00823	Phosphopantetheine attachment site
CRH09_RS04950	SM00823	Phosphopantetheine attachment site
CRH09_RS04950	SM00824	Thioesterase
CRH09_RS04955	SM00823	Phosphopantetheine attachment site
CRH09_RS04980	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS05055	SM01403	CRH09_RS05055
CRH09_RS05075	SM01382	CRH09_RS05075
CRH09_RS05075	SM01383	CRH09_RS05075
CRH09_RS05090	SM00322	K homology RNA-binding domain
CRH09_RS05195	SM00825	Beta-ketoacyl synthase
CRH09_RS05200	SM00822	CRH09_RS05200
CRH09_RS05200	SM00823	Phosphopantetheine attachment site
CRH09_RS05200	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS05205	SM00823	Phosphopantetheine attachment site
CRH09_RS05205	SM01294	CRH09_RS05205
CRH09_RS05210	SM00823	Phosphopantetheine attachment site
CRH09_RS05215	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS05240	SM00470	ParB-like nuclease domain
CRH09_RS05265	SM00825	Beta-ketoacyl synthase
CRH09_RS05295	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS05310	SM00822	CRH09_RS05310
CRH09_RS05335	SM01374	CRH09_RS05335
CRH09_RS05340	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CRH09_RS05360	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS05425	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS05435	SM00422	helix_turn_helix, mercury resistance
CRH09_RS05445	SM00448	cheY-homologous receiver domain
CRH09_RS05445	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS05560	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS05585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS05585	SM00866	CRH09_RS05585
CRH09_RS05605	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH09_RS05625	SM00363	S4 RNA-binding domain
CRH09_RS05625	SM01390	CRH09_RS05625
CRH09_RS05630	SM00662	RNA polymerases D
CRH09_RS05730	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS05745	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS05790	SM00240	Forkhead associated domain
CRH09_RS05790	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS05830	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS05875	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS05895	SM01005	Alanine racemase, C-terminal domain
CRH09_RS05930	SM00883	Chaperonin 10 Kd subunit
CRH09_RS05975	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH09_RS05975	SM01240	CRH09_RS05975
CRH09_RS05980	SM01240	CRH09_RS05980
CRH09_RS06015	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS06015	SM00448	cheY-homologous receiver domain
CRH09_RS06020	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS06070	SM00822	CRH09_RS06070
CRH09_RS06075	SM00481	DNA polymerase alpha chain like domain
CRH09_RS06100	SM01152	CRH09_RS06100
CRH09_RS06125	SM01329	CRH09_RS06125
CRH09_RS06155	SM00822	CRH09_RS06155
CRH09_RS06245	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS06350	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CRH09_RS06470	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CRH09_RS06470	SM01232	CRH09_RS06470
CRH09_RS06475	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS06475	SM00487	DEAD-like helicases superfamily
CRH09_RS06475	SM00490	helicase superfamily c-terminal domain
CRH09_RS06480	SM00855	Phosphoglycerate mutase family
CRH09_RS06505	SM00344	helix_turn_helix ASNC type
CRH09_RS06540	SM00450	Rhodanese Homology Domain
CRH09_RS06545	SM00878	Biotin carboxylase C-terminal domain
CRH09_RS06550	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS06580	SM00448	cheY-homologous receiver domain
CRH09_RS06580	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS06585	SM00387	Histidine kinase-like ATPases
CRH09_RS06600	SM01001	AIR carboxylase
CRH09_RS06635	SM00883	Chaperonin 10 Kd subunit
CRH09_RS06665	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CRH09_RS06665	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CRH09_RS06690	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS06720	SM00861	Transketolase, pyrimidine binding domain
CRH09_RS06740	SM00450	Rhodanese Homology Domain
CRH09_RS06755	SM00487	DEAD-like helicases superfamily
CRH09_RS06755	SM00490	helicase superfamily c-terminal domain
CRH09_RS06855	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS06880	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS06910	SM00752	Horizontally Transferred TransMembrane Domain
CRH09_RS06970	SM01260	CRH09_RS06970
CRH09_RS07005	SM00836	DALR anticodon binding domain
CRH09_RS07005	SM01016	Arginyl tRNA synthetase N terminal dom
CRH09_RS07030	SM00357	Cold shock protein domain
CRH09_RS07030	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS07030	SM00959	Rho termination factor, N-terminal domain
CRH09_RS07045	SM00937	CRH09_RS07045
CRH09_RS07055	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS07060	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS07115	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS07195	SM00642	Alpha-amylase domain
CRH09_RS07200	SM00642	Alpha-amylase domain
CRH09_RS07230	SM00487	DEAD-like helicases superfamily
CRH09_RS07230	SM00491	CRH09_RS07230
CRH09_RS07255	SM00232	JAB/MPN domain
CRH09_RS07275	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS07340	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS07385	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS07390	SM00450	Rhodanese Homology Domain
CRH09_RS07420	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS07510	SM01007	Class II Aldolase and Adducin N-terminal domain
CRH09_RS07520	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS07560	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS07575	SM00825	Beta-ketoacyl synthase
CRH09_RS07605	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS07615	SM00867	YceI-like domain 
CRH09_RS07625	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS07635	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CRH09_RS07635	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CRH09_RS07645	SM00344	helix_turn_helix ASNC type
CRH09_RS07710	SM00098	Alkaline phosphatase homologues
CRH09_RS07725	SM00823	Phosphopantetheine attachment site
CRH09_RS07725	SM00825	Beta-ketoacyl synthase
CRH09_RS07725	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS07725	SM01294	CRH09_RS07725
CRH09_RS07730	SM00823	Phosphopantetheine attachment site
CRH09_RS07735	SM00823	Phosphopantetheine attachment site
CRH09_RS07735	SM00825	Beta-ketoacyl synthase
CRH09_RS07735	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS07740	SM00823	Phosphopantetheine attachment site
CRH09_RS07760	SM00822	CRH09_RS07760
CRH09_RS07765	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS07805	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS07810	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS07835	SM00645	Papain family cysteine protease
CRH09_RS07865	SM00823	Phosphopantetheine attachment site
CRH09_RS07865	SM01294	CRH09_RS07865
CRH09_RS07885	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS07895	SM00422	helix_turn_helix, mercury resistance
CRH09_RS07920	SM00091	PAS domain
CRH09_RS07920	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS07955	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS07990	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS08085	SM00822	CRH09_RS08085
CRH09_RS08085	SM00823	Phosphopantetheine attachment site
CRH09_RS08085	SM00825	Beta-ketoacyl synthase
CRH09_RS08085	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS08085	SM01294	CRH09_RS08085
CRH09_RS08090	SM00822	CRH09_RS08090
CRH09_RS08090	SM00823	Phosphopantetheine attachment site
CRH09_RS08090	SM00825	Beta-ketoacyl synthase
CRH09_RS08090	SM00826	CRH09_RS08090
CRH09_RS08090	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS08090	SM01294	CRH09_RS08090
CRH09_RS08095	SM00822	CRH09_RS08095
CRH09_RS08095	SM00823	Phosphopantetheine attachment site
CRH09_RS08095	SM00825	Beta-ketoacyl synthase
CRH09_RS08095	SM00826	CRH09_RS08095
CRH09_RS08095	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS08095	SM00829	Enoylreductase
CRH09_RS08095	SM01294	CRH09_RS08095
CRH09_RS08195	SM00824	Thioesterase
CRH09_RS08225	SM00822	CRH09_RS08225
CRH09_RS08225	SM00823	Phosphopantetheine attachment site
CRH09_RS08225	SM00825	Beta-ketoacyl synthase
CRH09_RS08225	SM00826	CRH09_RS08225
CRH09_RS08225	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS08225	SM00829	Enoylreductase
CRH09_RS08225	SM01294	CRH09_RS08225
CRH09_RS08230	SM00822	CRH09_RS08230
CRH09_RS08230	SM00823	Phosphopantetheine attachment site
CRH09_RS08230	SM00825	Beta-ketoacyl synthase
CRH09_RS08230	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS08230	SM01294	CRH09_RS08230
CRH09_RS08235	SM00824	Thioesterase
CRH09_RS08260	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS08280	SM00872	Alpha mannosidase, middle domain
CRH09_RS08285	SM00829	Enoylreductase
CRH09_RS08330	SM00998	Adenylosuccinate lyase C-terminus
CRH09_RS08375	SM00470	ParB-like nuclease domain
CRH09_RS08395	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS08480	SM00062	Bacterial periplasmic substrate-binding proteins
CRH09_RS08515	SM00650	Ribosomal RNA adenine dimethylases
CRH09_RS08520	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS08550	SM00825	Beta-ketoacyl synthase
CRH09_RS08550	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS08580	SM00894	Excalibur calcium-binding domain
CRH09_RS08605	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS08605	SM00448	cheY-homologous receiver domain
CRH09_RS08640	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH09_RS08670	SM00825	Beta-ketoacyl synthase
CRH09_RS08690	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS08780	SM00631	CRH09_RS08780
CRH09_RS08810	SM00470	ParB-like nuclease domain
CRH09_RS08855	SM00823	Phosphopantetheine attachment site
CRH09_RS08880	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS08880	SM01043	Bacterial transcriptional activator domain
CRH09_RS08915	SM00823	Phosphopantetheine attachment site
CRH09_RS08915	SM00824	Thioesterase
CRH09_RS08965	SM00487	DEAD-like helicases superfamily
CRH09_RS09030	SM00479	CRH09_RS09030
CRH09_RS09055	SM00028	Tetratricopeptide repeats
CRH09_RS09055	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS09075	SM00903	Flavin reductase like domain
CRH09_RS09090	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS09095	SM00854	Bacterial capsule synthesis protein PGA_cap
CRH09_RS09110	SM00998	Adenylosuccinate lyase C-terminus
CRH09_RS09120	SM00830	Chorismate mutase type II
CRH09_RS09135	SM00470	ParB-like nuclease domain
CRH09_RS09150	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS09170	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS09180	SM00822	CRH09_RS09180
CRH09_RS09245	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS09265	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS09320	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS09350	SM00422	helix_turn_helix, mercury resistance
CRH09_RS09410	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS09460	SM00822	CRH09_RS09460
CRH09_RS09480	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS09485	SM00903	Flavin reductase like domain
CRH09_RS09515	SM00470	ParB-like nuclease domain
CRH09_RS09525	SM00825	Beta-ketoacyl synthase
CRH09_RS09545	SM00823	Phosphopantetheine attachment site
CRH09_RS09570	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS09570	SM01043	Bacterial transcriptional activator domain
CRH09_RS09730	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS09765	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS09775	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS09780	SM00507	HNH nucleases
CRH09_RS09790	SM00642	Alpha-amylase domain
CRH09_RS09815	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS09860	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CRH09_RS09860	SM01232	CRH09_RS09860
CRH09_RS09870	SM00267	diguanylate cyclase
CRH09_RS09890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS09890	SM00387	Histidine kinase-like ATPases
CRH09_RS09890	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS09940	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS09940	SM00994	ClpX C4-type zinc finger
CRH09_RS09940	SM01086	C-terminal, D2-small domain, of ClpB protein
CRH09_RS09955	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS09980	SM00896	Ferredoxin-fold anticodon binding domain
CRH09_RS10000	SM00344	helix_turn_helix ASNC type
CRH09_RS10015	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS10050	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CRH09_RS10060	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS10085	SM00562	CRH09_RS10085
CRH09_RS10090	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH09_RS10110	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CRH09_RS10240	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS10260	SM00829	Enoylreductase
CRH09_RS10265	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS10295	SM00822	CRH09_RS10295
CRH09_RS10315	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CRH09_RS10360	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS10385	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS10465	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CRH09_RS10485	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS10515	SM00855	Phosphoglycerate mutase family
CRH09_RS10560	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS10570	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS10585	SM00822	CRH09_RS10585
CRH09_RS10610	SM00838	Elongation factor G C-terminus
CRH09_RS10655	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS10715	SM01130	CRH09_RS10715
CRH09_RS10740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS10740	SM00895	CRH09_RS10740
CRH09_RS10770	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH09_RS10780	SM00271	DnaJ molecular chaperone homology domain
CRH09_RS10835	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS10890	SM00387	Histidine kinase-like ATPases
CRH09_RS10890	SM00433	TopoisomeraseII
CRH09_RS10905	SM00322	K homology RNA-binding domain
CRH09_RS10915	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH09_RS10915	SM01091	Transporter associated domain
CRH09_RS10945	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS10965	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS10985	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS11005	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS11010	SM00829	Enoylreductase
CRH09_RS11015	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS11030	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS11030	SM00448	cheY-homologous receiver domain
CRH09_RS11040	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS11050	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CRH09_RS11055	SM00400	zinc finger
CRH09_RS11055	SM00493	CRH09_RS11055
CRH09_RS11055	SM00766	DNA primase DnaG DnaB-binding
CRH09_RS11065	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CRH09_RS11090	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS11115	SM00487	DEAD-like helicases superfamily
CRH09_RS11115	SM00490	helicase superfamily c-terminal domain
CRH09_RS11135	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS11265	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS11300	SM00861	Transketolase, pyrimidine binding domain
CRH09_RS11325	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS11340	SM00823	Phosphopantetheine attachment site
CRH09_RS11345	SM00823	Phosphopantetheine attachment site
CRH09_RS11360	SM00861	Transketolase, pyrimidine binding domain
CRH09_RS11395	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CRH09_RS11410	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CRH09_RS11455	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS11475	SM00822	CRH09_RS11475
CRH09_RS11485	SM00829	Enoylreductase
CRH09_RS11550	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS11585	SM00507	HNH nucleases
CRH09_RS11630	SM00825	Beta-ketoacyl synthase
CRH09_RS11640	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS11690	SM00487	DEAD-like helicases superfamily
CRH09_RS11690	SM00490	helicase superfamily c-terminal domain
CRH09_RS11715	SM01101	CRH09_RS11715
CRH09_RS11795	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS11815	SM00822	CRH09_RS11815
CRH09_RS11845	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS11860	SM00822	CRH09_RS11860
CRH09_RS11865	SM00923	MbtH-like protein
CRH09_RS11870	SM00823	Phosphopantetheine attachment site
CRH09_RS11875	SM00823	Phosphopantetheine attachment site
CRH09_RS11880	SM00823	Phosphopantetheine attachment site
CRH09_RS11880	SM00824	Thioesterase
CRH09_RS11885	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS11890	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS11900	SM00823	Phosphopantetheine attachment site
CRH09_RS11920	SM00823	Phosphopantetheine attachment site
CRH09_RS11940	SM00823	Phosphopantetheine attachment site
CRH09_RS11955	SM00822	CRH09_RS11955
CRH09_RS11955	SM00823	Phosphopantetheine attachment site
CRH09_RS11955	SM00825	Beta-ketoacyl synthase
CRH09_RS11955	SM00826	CRH09_RS11955
CRH09_RS11955	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS11955	SM00829	Enoylreductase
CRH09_RS11955	SM01294	CRH09_RS11955
CRH09_RS11960	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS11960	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS11960	SM01043	Bacterial transcriptional activator domain
CRH09_RS12000	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS12065	SM00226	Low molecular weight phosphatase family
CRH09_RS12070	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS12105	SM00855	Phosphoglycerate mutase family
CRH09_RS12120	SM00244	prohibitin homologues
CRH09_RS12130	SM00955	CRH09_RS12130
CRH09_RS12135	SM00880	CRH09_RS12135
CRH09_RS12160	SM01230	CRH09_RS12160
CRH09_RS12175	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS12225	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CRH09_RS12250	SM00155	Phospholipase D. Active site motifs.
CRH09_RS12255	SM01230	CRH09_RS12255
CRH09_RS12265	SM00645	Papain family cysteine protease
CRH09_RS12275	SM00838	Elongation factor G C-terminus
CRH09_RS12275	SM00889	Elongation factor G, domain IV
CRH09_RS12280	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH09_RS12325	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS12350	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS12410	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS12480	SM00465	GIY-YIG type nucleases (URI domain)
CRH09_RS12480	SM00479	CRH09_RS12480
CRH09_RS12530	SM00563	Phosphate acyltransferases
CRH09_RS12545	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS12545	SM00740	CRH09_RS12545
CRH09_RS12690	SM00864	Tubulin/FtsZ family, GTPase domain
CRH09_RS12690	SM00865	Tubulin/FtsZ family, C-terminal domain
CRH09_RS12730	SM00479	CRH09_RS12730
CRH09_RS12765	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS12840	SM00822	CRH09_RS12840
CRH09_RS12845	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS12865	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS12870	SM00387	Histidine kinase-like ATPases
CRH09_RS12875	SM00448	cheY-homologous receiver domain
CRH09_RS12885	SM00642	Alpha-amylase domain
CRH09_RS12900	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS12910	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS12910	SM01009	AlkA N-terminal domain
CRH09_RS12945	SM00354	helix_turn _helix lactose operon repressor
CRH09_RS12970	SM00481	DNA polymerase alpha chain like domain
CRH09_RS12985	SM00387	Histidine kinase-like ATPases
CRH09_RS12985	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS12990	SM00448	cheY-homologous receiver domain
CRH09_RS12990	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS13000	SM00642	Alpha-amylase domain
CRH09_RS13005	SM00642	Alpha-amylase domain
CRH09_RS13010	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS13050	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS13065	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH09_RS13065	SM00876	Biotin and Thiamin Synthesis associated domain
CRH09_RS13135	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS13140	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS13205	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS13260	SM00062	Bacterial periplasmic substrate-binding proteins
CRH09_RS13285	SM00226	Low molecular weight phosphatase family
CRH09_RS13300	SM00448	cheY-homologous receiver domain
CRH09_RS13300	SM01012	CRH09_RS13300
CRH09_RS13320	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS13330	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CRH09_RS13330	SM00474	3'-5' exonuclease
CRH09_RS13330	SM00475	5'-3' exonuclease
CRH09_RS13330	SM00482	DNA polymerase A domain
CRH09_RS13350	SM00917	LeuA allosteric (dimerisation) domain
CRH09_RS13365	SM01329	CRH09_RS13365
CRH09_RS13370	SM00062	Bacterial periplasmic substrate-binding proteins
CRH09_RS13380	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS13395	SM00244	prohibitin homologues
CRH09_RS13410	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH09_RS13440	SM00487	DEAD-like helicases superfamily
CRH09_RS13440	SM00490	helicase superfamily c-terminal domain
CRH09_RS13450	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS13470	SM00091	PAS domain
CRH09_RS13470	SM00267	diguanylate cyclase
CRH09_RS13525	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CRH09_RS13535	SM00873	B3/4 domain
CRH09_RS13535	SM00874	tRNA synthetase B5 domain
CRH09_RS13535	SM00896	Ferredoxin-fold anticodon binding domain
CRH09_RS13540	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS13580	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS13590	SM01119	CRH09_RS13590
CRH09_RS13615	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CRH09_RS13645	SM01118	CRH09_RS13645
CRH09_RS13660	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS13695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS13695	SM00895	CRH09_RS13695
CRH09_RS13715	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS13725	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CRH09_RS13730	SM00822	CRH09_RS13730
CRH09_RS13765	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS13870	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS13890	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS13890	SM00895	CRH09_RS13890
CRH09_RS13895	SM00363	S4 RNA-binding domain
CRH09_RS13935	SM00363	S4 RNA-binding domain
CRH09_RS14000	SM00363	S4 RNA-binding domain
CRH09_RS14010	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS14035	SM00822	CRH09_RS14035
CRH09_RS14040	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS14055	SM00829	Enoylreductase
CRH09_RS14060	SM00052	Putative diguanylate phosphodiesterase
CRH09_RS14060	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CRH09_RS14060	SM00091	PAS domain
CRH09_RS14060	SM00267	diguanylate cyclase
CRH09_RS14080	SM00320	WD40 repeats
CRH09_RS14095	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS14170	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS14170	SM01043	Bacterial transcriptional activator domain
CRH09_RS14185	SM00448	cheY-homologous receiver domain
CRH09_RS14185	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS14190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS14190	SM00387	Histidine kinase-like ATPases
CRH09_RS14190	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS14195	SM01322	CRH09_RS14195
CRH09_RS14205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS14235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS14235	SM00866	CRH09_RS14235
CRH09_RS14280	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS14295	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS14335	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS14340	SM00960	Roadblock/LC7 domain
CRH09_RS14355	SM00564	beta-propeller repeat
CRH09_RS14375	SM00829	Enoylreductase
CRH09_RS14455	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS14565	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS14575	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS14575	SM00448	cheY-homologous receiver domain
CRH09_RS14605	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS14710	SM00448	cheY-homologous receiver domain
CRH09_RS14710	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS14715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS14715	SM00387	Histidine kinase-like ATPases
CRH09_RS14715	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS14720	SM00020	Trypsin-like serine protease
CRH09_RS14735	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH09_RS14735	SM01134	CRH09_RS14735
CRH09_RS14745	SM01120	CRH09_RS14745
CRH09_RS14765	SM00823	Phosphopantetheine attachment site
CRH09_RS14765	SM00824	Thioesterase
CRH09_RS14785	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS14805	SM00387	Histidine kinase-like ATPases
CRH09_RS14810	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS14810	SM00448	cheY-homologous receiver domain
CRH09_RS14895	SM00331	Sigma factor PP2C-like phosphatases
CRH09_RS14895	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CRH09_RS14895	SM00422	helix_turn_helix, mercury resistance
CRH09_RS14900	SM00100	Cyclic nucleotide-monophosphate binding domain
CRH09_RS14910	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS14940	SM00100	Cyclic nucleotide-monophosphate binding domain
CRH09_RS14990	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CRH09_RS15030	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS15045	SM00357	Cold shock protein domain
CRH09_RS15085	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS15135	SM01012	CRH09_RS15135
CRH09_RS15145	SM01060	CRH09_RS15145
CRH09_RS15165	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS15185	SM00829	Enoylreductase
CRH09_RS15195	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS15210	SM00100	Cyclic nucleotide-monophosphate binding domain
CRH09_RS15220	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS15240	SM00422	helix_turn_helix, mercury resistance
CRH09_RS15275	SM01007	Class II Aldolase and Adducin N-terminal domain
CRH09_RS15285	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS15315	SM00855	Phosphoglycerate mutase family
CRH09_RS15380	SM01110	CRH09_RS15380
CRH09_RS15545	SM00487	DEAD-like helicases superfamily
CRH09_RS15545	SM00490	helicase superfamily c-terminal domain
CRH09_RS15570	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS15585	SM00758	CRH09_RS15585
CRH09_RS15590	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CRH09_RS15735	SM00822	CRH09_RS15735
CRH09_RS15770	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS15810	SM00822	CRH09_RS15810
CRH09_RS15810	SM00825	Beta-ketoacyl synthase
CRH09_RS15810	SM00826	CRH09_RS15810
CRH09_RS15810	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS15820	SM00903	Flavin reductase like domain
CRH09_RS15895	SM01043	Bacterial transcriptional activator domain
CRH09_RS15960	SM00560	LamG-like jellyroll fold domain
CRH09_RS16045	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS16065	SM00870	CRH09_RS16065
CRH09_RS16070	SM00344	helix_turn_helix ASNC type
CRH09_RS16080	SM01217	CRH09_RS16080
CRH09_RS16135	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS16135	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS16170	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS16220	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS16305	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS16320	SM00829	Enoylreductase
CRH09_RS16340	SM01110	CRH09_RS16340
CRH09_RS16365	SM00822	CRH09_RS16365
CRH09_RS16375	SM00823	Phosphopantetheine attachment site
CRH09_RS16375	SM00824	Thioesterase
CRH09_RS16555	SM00240	Forkhead associated domain
CRH09_RS16560	SM00422	helix_turn_helix, mercury resistance
CRH09_RS16570	SM00422	helix_turn_helix, mercury resistance
CRH09_RS16585	SM00327	von Willebrand factor (vWF) type A domain
CRH09_RS16655	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS16685	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH09_RS16690	SM01091	Transporter associated domain
CRH09_RS16695	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH09_RS16695	SM01240	CRH09_RS16695
CRH09_RS16705	SM00487	DEAD-like helicases superfamily
CRH09_RS16705	SM00490	helicase superfamily c-terminal domain
CRH09_RS16720	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS16785	SM00829	Enoylreductase
CRH09_RS16940	SM00331	Sigma factor PP2C-like phosphatases
CRH09_RS16945	SM00331	Sigma factor PP2C-like phosphatases
CRH09_RS16950	SM00387	Histidine kinase-like ATPases
CRH09_RS16965	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS16975	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS16995	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH09_RS17045	SM00823	Phosphopantetheine attachment site
CRH09_RS17055	SM01018	B12 binding domain
CRH09_RS17060	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS17110	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS17115	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS17135	SM00966	SpoVT / AbrB like domain 
CRH09_RS17155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS17190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS17190	SM00895	CRH09_RS17190
CRH09_RS17205	SM00796	Allophanate hydrolase subunit 1
CRH09_RS17210	SM00797	Allophanate hydrolase subunit 2
CRH09_RS17265	SM01230	CRH09_RS17265
CRH09_RS17375	SM00487	DEAD-like helicases superfamily
CRH09_RS17375	SM00490	helicase superfamily c-terminal domain
CRH09_RS17375	SM01142	CRH09_RS17375
CRH09_RS17385	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CRH09_RS17385	SM00475	5'-3' exonuclease
CRH09_RS17435	SM00344	helix_turn_helix ASNC type
CRH09_RS17485	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS17535	SM00387	Histidine kinase-like ATPases
CRH09_RS17540	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS17540	SM00448	cheY-homologous receiver domain
CRH09_RS17555	SM00835	Cupin
CRH09_RS17570	SM00823	Phosphopantetheine attachment site
CRH09_RS17575	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS17615	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS17645	SM01260	CRH09_RS17645
CRH09_RS17670	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS17675	SM00255	Toll - interleukin 1 - resistance
CRH09_RS17680	SM00091	PAS domain
CRH09_RS17680	SM00138	Methyltransferase, chemotaxis proteins 
CRH09_RS17685	SM01012	CRH09_RS17685
CRH09_RS17695	SM01012	CRH09_RS17695
CRH09_RS17700	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH09_RS17700	SM01134	CRH09_RS17700
CRH09_RS17725	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS17740	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS17755	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS17760	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS17820	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS17840	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS17845	SM00829	Enoylreductase
CRH09_RS17880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS17880	SM00895	CRH09_RS17880
CRH09_RS17895	SM00028	Tetratricopeptide repeats
CRH09_RS17895	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS17915	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CRH09_RS17915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS17915	SM00387	Histidine kinase-like ATPases
CRH09_RS17915	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS17915	SM00448	cheY-homologous receiver domain
CRH09_RS17920	SM00448	cheY-homologous receiver domain
CRH09_RS17925	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS17945	SM00889	Elongation factor G, domain IV
CRH09_RS17960	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS17995	SM00961	Ribulose bisphosphate carboxylase, small chain
CRH09_RS18000	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS18080	SM00422	helix_turn_helix, mercury resistance
CRH09_RS18150	SM00825	Beta-ketoacyl synthase
CRH09_RS18155	SM01007	Class II Aldolase and Adducin N-terminal domain
CRH09_RS18180	SM00960	Roadblock/LC7 domain
CRH09_RS18185	SM00387	Histidine kinase-like ATPases
CRH09_RS18195	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS18235	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS18280	SM00387	Histidine kinase-like ATPases
CRH09_RS18285	SM00960	Roadblock/LC7 domain
CRH09_RS18325	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS18330	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS18330	SM00448	cheY-homologous receiver domain
CRH09_RS18370	SM01116	CRH09_RS18370
CRH09_RS18390	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS18395	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS18455	SM00822	CRH09_RS18455
CRH09_RS18455	SM00823	Phosphopantetheine attachment site
CRH09_RS18455	SM00825	Beta-ketoacyl synthase
CRH09_RS18460	SM00823	Phosphopantetheine attachment site
CRH09_RS18460	SM00824	Thioesterase
CRH09_RS18475	SM00836	DALR anticodon binding domain
CRH09_RS18475	SM01016	Arginyl tRNA synthetase N terminal dom
CRH09_RS18490	SM00422	helix_turn_helix, mercury resistance
CRH09_RS18510	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS18535	SM00882	Coenzyme A transferase
CRH09_RS18540	SM00882	Coenzyme A transferase
CRH09_RS18560	SM00998	Adenylosuccinate lyase C-terminus
CRH09_RS18605	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS18645	SM00344	helix_turn_helix ASNC type
CRH09_RS18650	SM00923	MbtH-like protein
CRH09_RS18655	SM00823	Phosphopantetheine attachment site
CRH09_RS18660	SM00823	Phosphopantetheine attachment site
CRH09_RS18665	SM00823	Phosphopantetheine attachment site
CRH09_RS18665	SM00824	Thioesterase
CRH09_RS18685	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS18690	SM00470	ParB-like nuclease domain
CRH09_RS18710	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS18715	SM01005	Alanine racemase, C-terminal domain
CRH09_RS18750	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS18755	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS18795	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS18845	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS18880	SM00448	cheY-homologous receiver domain
CRH09_RS18880	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS18885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS18885	SM00387	Histidine kinase-like ATPases
CRH09_RS18885	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS18910	SM00822	CRH09_RS18910
CRH09_RS18915	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS18960	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS19000	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS19000	SM00448	cheY-homologous receiver domain
CRH09_RS19005	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CRH09_RS19005	SM00387	Histidine kinase-like ATPases
CRH09_RS19055	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS19070	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS19095	SM01266	CRH09_RS19095
CRH09_RS19125	SM00855	Phosphoglycerate mutase family
CRH09_RS19145	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS19200	SM00028	Tetratricopeptide repeats
CRH09_RS19235	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS19235	SM00448	cheY-homologous receiver domain
CRH09_RS19305	SM01260	CRH09_RS19305
CRH09_RS19355	SM00704	CDGSH-type zinc finger. Function unknown.
CRH09_RS19375	SM00822	CRH09_RS19375
CRH09_RS19385	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS19390	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS19460	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS19480	SM00028	Tetratricopeptide repeats
CRH09_RS19490	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS19490	SM00448	cheY-homologous receiver domain
CRH09_RS19495	SM00829	Enoylreductase
CRH09_RS19535	SM00822	CRH09_RS19535
CRH09_RS19575	SM00829	Enoylreductase
CRH09_RS19600	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS19625	SM01012	CRH09_RS19625
CRH09_RS19630	SM01012	CRH09_RS19630
CRH09_RS19635	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH09_RS19640	SM00448	cheY-homologous receiver domain
CRH09_RS19680	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CRH09_RS19685	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CRH09_RS19685	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CRH09_RS19765	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS19840	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH09_RS19880	SM00091	PAS domain
CRH09_RS19880	SM00267	diguanylate cyclase
CRH09_RS19990	SM00422	helix_turn_helix, mercury resistance
CRH09_RS20010	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS20010	SM00448	cheY-homologous receiver domain
CRH09_RS20015	SM00387	Histidine kinase-like ATPases
CRH09_RS20040	SM00344	helix_turn_helix ASNC type
CRH09_RS20080	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS20095	SM00422	helix_turn_helix, mercury resistance
CRH09_RS20110	SM00632	CRH09_RS20110
CRH09_RS20110	SM00642	Alpha-amylase domain
CRH09_RS20120	SM00422	helix_turn_helix, mercury resistance
CRH09_RS20160	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS20160	SM00448	cheY-homologous receiver domain
CRH09_RS20165	SM00387	Histidine kinase-like ATPases
CRH09_RS20180	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CRH09_RS20195	SM00822	CRH09_RS20195
CRH09_RS20330	SM00823	Phosphopantetheine attachment site
CRH09_RS20335	SM00823	Phosphopantetheine attachment site
CRH09_RS20345	SM01130	CRH09_RS20345
CRH09_RS20360	SM01236	CRH09_RS20360
CRH09_RS20405	SM01230	CRH09_RS20405
CRH09_RS20475	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS20480	SM00822	CRH09_RS20480
CRH09_RS20490	SM00825	Beta-ketoacyl synthase
CRH09_RS20490	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS20545	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS20565	SM00645	Papain family cysteine protease
CRH09_RS20570	SM00824	Thioesterase
CRH09_RS20580	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS20580	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS20580	SM01043	Bacterial transcriptional activator domain
CRH09_RS20605	SM00822	CRH09_RS20605
CRH09_RS20605	SM00823	Phosphopantetheine attachment site
CRH09_RS20605	SM00824	Thioesterase
CRH09_RS20605	SM00825	Beta-ketoacyl synthase
CRH09_RS20605	SM00826	CRH09_RS20605
CRH09_RS20605	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS20605	SM01294	CRH09_RS20605
CRH09_RS20610	SM00822	CRH09_RS20610
CRH09_RS20610	SM00823	Phosphopantetheine attachment site
CRH09_RS20610	SM00825	Beta-ketoacyl synthase
CRH09_RS20610	SM00826	CRH09_RS20610
CRH09_RS20610	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS20610	SM01294	CRH09_RS20610
CRH09_RS20615	SM00822	CRH09_RS20615
CRH09_RS20615	SM00823	Phosphopantetheine attachment site
CRH09_RS20615	SM00825	Beta-ketoacyl synthase
CRH09_RS20615	SM00826	CRH09_RS20615
CRH09_RS20615	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS20615	SM00829	Enoylreductase
CRH09_RS20615	SM01294	CRH09_RS20615
CRH09_RS20620	SM00822	CRH09_RS20620
CRH09_RS20620	SM00823	Phosphopantetheine attachment site
CRH09_RS20620	SM00825	Beta-ketoacyl synthase
CRH09_RS20620	SM00826	CRH09_RS20620
CRH09_RS20620	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS20620	SM01294	CRH09_RS20620
CRH09_RS20640	SM00822	CRH09_RS20640
CRH09_RS20640	SM00823	Phosphopantetheine attachment site
CRH09_RS20640	SM00825	Beta-ketoacyl synthase
CRH09_RS20640	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS20640	SM01294	CRH09_RS20640
CRH09_RS20645	SM00822	CRH09_RS20645
CRH09_RS20645	SM00823	Phosphopantetheine attachment site
CRH09_RS20645	SM00825	Beta-ketoacyl synthase
CRH09_RS20645	SM00826	CRH09_RS20645
CRH09_RS20645	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS20645	SM01294	CRH09_RS20645
CRH09_RS20650	SM00822	CRH09_RS20650
CRH09_RS20650	SM00823	Phosphopantetheine attachment site
CRH09_RS20650	SM00825	Beta-ketoacyl synthase
CRH09_RS20650	SM00826	CRH09_RS20650
CRH09_RS20650	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS20650	SM01294	CRH09_RS20650
CRH09_RS20695	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS20720	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS20735	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS20750	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS20785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS20835	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS20850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS20850	SM00895	CRH09_RS20850
CRH09_RS20885	SM00645	Papain family cysteine protease
CRH09_RS20890	SM00422	helix_turn_helix, mercury resistance
CRH09_RS20940	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CRH09_RS20995	SM00450	Rhodanese Homology Domain
CRH09_RS21030	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS21080	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS21140	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS21165	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CRH09_RS21165	SM00387	Histidine kinase-like ATPases
CRH09_RS21195	SM00267	diguanylate cyclase
CRH09_RS21215	SM00357	Cold shock protein domain
CRH09_RS21275	SM00824	Thioesterase
CRH09_RS21355	SM00448	cheY-homologous receiver domain
CRH09_RS21355	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS21360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS21360	SM00387	Histidine kinase-like ATPases
CRH09_RS21360	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS21405	SM00422	helix_turn_helix, mercury resistance
CRH09_RS21420	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS21460	SM00422	helix_turn_helix, mercury resistance
CRH09_RS21485	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CRH09_RS21505	SM00062	Bacterial periplasmic substrate-binding proteins
CRH09_RS21510	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS21520	SM00244	prohibitin homologues
CRH09_RS21550	SM00020	Trypsin-like serine protease
CRH09_RS21565	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS21580	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS21615	SM00822	CRH09_RS21615
CRH09_RS21620	SM00327	von Willebrand factor (vWF) type A domain
CRH09_RS21675	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS21680	SM00835	Cupin
CRH09_RS21690	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS21730	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CRH09_RS21740	SM00829	Enoylreductase
CRH09_RS21750	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS21765	SM00422	helix_turn_helix, mercury resistance
CRH09_RS21835	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS21875	SM00822	CRH09_RS21875
CRH09_RS21890	SM00825	Beta-ketoacyl synthase
CRH09_RS21910	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS21950	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS21985	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CRH09_RS22035	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS22060	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS22075	SM00986	Uracil DNA glycosylase superfamily
CRH09_RS22075	SM00987	UreE urease accessory protein, C-terminal domain 
CRH09_RS22085	SM00834	Putative regulatory protein
CRH09_RS22090	SM00062	Bacterial periplasmic substrate-binding proteins
CRH09_RS22100	SM00829	Enoylreductase
CRH09_RS22125	SM00861	Transketolase, pyrimidine binding domain
CRH09_RS22175	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS22195	SM00861	Transketolase, pyrimidine binding domain
CRH09_RS22220	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CRH09_RS22245	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CRH09_RS22245	SM00465	GIY-YIG type nucleases (URI domain)
CRH09_RS22265	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CRH09_RS22300	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS22365	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CRH09_RS22375	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CRH09_RS22380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS22380	SM00895	CRH09_RS22380
CRH09_RS22445	SM01409	CRH09_RS22445
CRH09_RS22450	SM00072	Guanylate kinase homologues.
CRH09_RS22460	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CRH09_RS22470	SM00851	MGS-like domain
CRH09_RS22470	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CRH09_RS22475	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CRH09_RS22505	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS22535	SM00093	SERine  Proteinase INhibitors
CRH09_RS22550	SM00841	Elongation factor P, C-terminal
CRH09_RS22550	SM01185	CRH09_RS22550
CRH09_RS22595	SM00732	Likely ribonuclease with RNase H fold.
CRH09_RS22600	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CRH09_RS22605	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS22645	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH09_RS22780	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CRH09_RS22780	SM00954	Region found in RelA / SpoT proteins
CRH09_RS22785	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS22835	SM01209	CRH09_RS22835
CRH09_RS22850	SM00903	Flavin reductase like domain
CRH09_RS22870	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS22905	SM01323	CRH09_RS22905
CRH09_RS22930	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS22935	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CRH09_RS22975	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS23025	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS23030	SM00829	Enoylreductase
CRH09_RS23060	SM00014	Acid phosphatase homologues
CRH09_RS23145	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS23185	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CRH09_RS23195	SM00320	WD40 repeats
CRH09_RS23210	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS23220	SM00829	Enoylreductase
CRH09_RS23225	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH09_RS23225	SM01134	CRH09_RS23225
CRH09_RS23245	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS23315	SM00822	CRH09_RS23315
CRH09_RS23330	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CRH09_RS23330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS23430	SM00344	helix_turn_helix ASNC type
CRH09_RS23450	SM00422	helix_turn_helix, mercury resistance
CRH09_RS23465	SM00947	Carbonic anhydrase
CRH09_RS23470	SM00947	Carbonic anhydrase
CRH09_RS23475	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS23520	SM00878	Biotin carboxylase C-terminal domain
CRH09_RS23530	SM00448	cheY-homologous receiver domain
CRH09_RS23530	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS23535	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS23535	SM00387	Histidine kinase-like ATPases
CRH09_RS23535	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS23540	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS23545	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS23595	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS23620	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS23635	SM00255	Toll - interleukin 1 - resistance
CRH09_RS23635	SM00320	WD40 repeats
CRH09_RS23650	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS23685	SM00636	CRH09_RS23685
CRH09_RS23715	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS23745	SM00824	Thioesterase
CRH09_RS23755	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS23755	SM01043	Bacterial transcriptional activator domain
CRH09_RS23770	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS23820	SM00422	helix_turn_helix, mercury resistance
CRH09_RS23845	SM00823	Phosphopantetheine attachment site
CRH09_RS23850	SM00823	Phosphopantetheine attachment site
CRH09_RS23920	SM00861	Transketolase, pyrimidine binding domain
CRH09_RS23930	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS23930	SM00387	Histidine kinase-like ATPases
CRH09_RS23930	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS23950	SM00448	cheY-homologous receiver domain
CRH09_RS23950	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS23960	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS23960	SM00448	cheY-homologous receiver domain
CRH09_RS23970	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH09_RS24000	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS24010	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS24025	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS24080	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS24105	SM00267	diguanylate cyclase
CRH09_RS24175	SM00563	Phosphate acyltransferases
CRH09_RS24185	SM00822	CRH09_RS24185
CRH09_RS24270	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS24305	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS24325	SM00855	Phosphoglycerate mutase family
CRH09_RS24405	SM00341	Helicase and RNase D C-terminal
CRH09_RS24405	SM00474	3'-5' exonuclease
CRH09_RS24415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS24415	SM00387	Histidine kinase-like ATPases
CRH09_RS24415	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS24420	SM00448	cheY-homologous receiver domain
CRH09_RS24420	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS24430	SM00861	Transketolase, pyrimidine binding domain
CRH09_RS24575	SM00487	DEAD-like helicases superfamily
CRH09_RS24575	SM00490	helicase superfamily c-terminal domain
CRH09_RS24590	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS24605	SM00487	DEAD-like helicases superfamily
CRH09_RS24635	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS24660	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS24675	SM00881	CoA binding domain
CRH09_RS24680	SM00529	Helix-turn-helix diphteria tox regulatory element
CRH09_RS24680	SM00899	CRH09_RS24680
CRH09_RS24720	SM00487	DEAD-like helicases superfamily
CRH09_RS24720	SM00490	helicase superfamily c-terminal domain
CRH09_RS24735	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS24745	SM00062	Bacterial periplasmic substrate-binding proteins
CRH09_RS24780	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS24810	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS24810	SM00487	DEAD-like helicases superfamily
CRH09_RS24810	SM00490	helicase superfamily c-terminal domain
CRH09_RS24810	SM00847	Helicase associated domain (HA2)  Add an annotation
CRH09_RS24855	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS24865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS24865	SM00866	CRH09_RS24865
CRH09_RS24875	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CRH09_RS24875	SM00091	PAS domain
CRH09_RS24875	SM00267	diguanylate cyclase
CRH09_RS24940	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS24955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS24955	SM00387	Histidine kinase-like ATPases
CRH09_RS24955	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS24960	SM00448	cheY-homologous receiver domain
CRH09_RS24960	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS25045	SM00422	helix_turn_helix, mercury resistance
CRH09_RS25115	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS25160	SM00563	Phosphate acyltransferases
CRH09_RS25195	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH09_RS25200	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS25205	SM00062	Bacterial periplasmic substrate-binding proteins
CRH09_RS25250	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS25265	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS25270	SM00344	helix_turn_helix ASNC type
CRH09_RS25330	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS25370	SM00835	Cupin
CRH09_RS25375	SM00843	CRH09_RS25375
CRH09_RS25380	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS25380	SM01043	Bacterial transcriptional activator domain
CRH09_RS25390	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS25395	SM01130	CRH09_RS25395
CRH09_RS25415	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS25415	SM00448	cheY-homologous receiver domain
CRH09_RS25425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS25425	SM00895	CRH09_RS25425
CRH09_RS25455	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS25470	SM00829	Enoylreductase
CRH09_RS25510	SM00829	Enoylreductase
CRH09_RS25620	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS25690	SM00857	Resolvase, N terminal domain
CRH09_RS25720	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS25735	SM00028	Tetratricopeptide repeats
CRH09_RS25790	SM00028	Tetratricopeptide repeats
CRH09_RS25800	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH09_RS25800	SM00322	K homology RNA-binding domain
CRH09_RS25805	SM01387	CRH09_RS25805
CRH09_RS25815	SM00904	Riboflavin kinase
CRH09_RS25820	SM00529	Helix-turn-helix diphteria tox regulatory element
CRH09_RS25820	SM00899	CRH09_RS25820
CRH09_RS25825	SM01329	CRH09_RS25825
CRH09_RS25850	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS25865	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS25930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS25930	SM00895	CRH09_RS25930
CRH09_RS25955	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CRH09_RS25960	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CRH09_RS25965	SM00482	DNA polymerase A domain
CRH09_RS26010	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH09_RS26065	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS26075	SM00248	ankyrin repeats
CRH09_RS26140	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS26210	SM00327	von Willebrand factor (vWF) type A domain
CRH09_RS26210	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS26250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS26250	SM00866	CRH09_RS26250
CRH09_RS26270	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS26340	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS26355	SM01110	CRH09_RS26355
CRH09_RS26370	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS26370	SM01043	Bacterial transcriptional activator domain
CRH09_RS26375	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS26375	SM01043	Bacterial transcriptional activator domain
CRH09_RS26450	SM00448	cheY-homologous receiver domain
CRH09_RS26450	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS26455	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS26455	SM00387	Histidine kinase-like ATPases
CRH09_RS26455	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS26585	SM00857	Resolvase, N terminal domain
CRH09_RS26615	SM00487	DEAD-like helicases superfamily
CRH09_RS26615	SM00490	helicase superfamily c-terminal domain
CRH09_RS26640	SM00861	Transketolase, pyrimidine binding domain
CRH09_RS26650	SM00100	Cyclic nucleotide-monophosphate binding domain
CRH09_RS26770	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CRH09_RS26785	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS26810	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS26830	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS26840	SM00823	Phosphopantetheine attachment site
CRH09_RS26875	SM00825	Beta-ketoacyl synthase
CRH09_RS26905	SM01043	Bacterial transcriptional activator domain
CRH09_RS27055	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS27080	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS27080	SM00448	cheY-homologous receiver domain
CRH09_RS27095	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS27150	SM00255	Toll - interleukin 1 - resistance
CRH09_RS27150	SM00320	WD40 repeats
CRH09_RS27160	SM00641	Glycosyl hydrolases family 25
CRH09_RS27165	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS27305	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS27320	SM00354	helix_turn _helix lactose operon repressor
CRH09_RS27340	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS27345	SM00642	Alpha-amylase domain
CRH09_RS27390	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS27390	SM00448	cheY-homologous receiver domain
CRH09_RS27480	SM00448	cheY-homologous receiver domain
CRH09_RS27480	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS27485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS27485	SM00387	Histidine kinase-like ATPases
CRH09_RS27485	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS27535	SM00072	Guanylate kinase homologues.
CRH09_RS27555	SM00996	S-adenosyl-L-homocysteine hydrolase
CRH09_RS27555	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CRH09_RS27570	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS27590	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS27600	SM00422	helix_turn_helix, mercury resistance
CRH09_RS27625	SM00344	helix_turn_helix ASNC type
CRH09_RS27660	SM00823	Phosphopantetheine attachment site
CRH09_RS27670	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS27735	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH09_RS27760	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS27815	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS27880	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS27925	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS27960	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH09_RS27960	SM00732	Likely ribonuclease with RNase H fold.
CRH09_RS28000	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS28000	SM00962	SRP54-type protein, GTPase domain
CRH09_RS28000	SM00963	SRP54-type protein, helical bundle domain
CRH09_RS28010	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CRH09_RS28015	SM00938	Nitrogen regulatory protein P-II
CRH09_RS28025	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS28025	SM00962	SRP54-type protein, GTPase domain
CRH09_RS28025	SM00963	SRP54-type protein, helical bundle domain
CRH09_RS28060	SM00968	SMC proteins Flexible Hinge Domain
CRH09_RS28100	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS28100	SM00387	Histidine kinase-like ATPases
CRH09_RS28100	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS28105	SM00448	cheY-homologous receiver domain
CRH09_RS28105	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS28125	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS28150	SM00387	Histidine kinase-like ATPases
CRH09_RS28150	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS28155	SM00448	cheY-homologous receiver domain
CRH09_RS28155	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS28180	SM00481	DNA polymerase alpha chain like domain
CRH09_RS28190	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CRH09_RS28190	SM01232	CRH09_RS28190
CRH09_RS28195	SM00358	Double-stranded RNA binding motif
CRH09_RS28195	SM00535	Ribonuclease III family
CRH09_RS28235	SM00878	Biotin carboxylase C-terminal domain
CRH09_RS28255	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS28265	SM00487	DEAD-like helicases superfamily
CRH09_RS28265	SM00490	helicase superfamily c-terminal domain
CRH09_RS28270	SM01120	CRH09_RS28270
CRH09_RS28270	SM01121	CRH09_RS28270
CRH09_RS28285	SM00986	Uracil DNA glycosylase superfamily
CRH09_RS28285	SM00987	UreE urease accessory protein, C-terminal domain 
CRH09_RS28320	SM00855	Phosphoglycerate mutase family
CRH09_RS28325	SM00411	bacterial (prokaryotic) histone like domain
CRH09_RS28340	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS28380	SM01329	CRH09_RS28380
CRH09_RS28395	SM00357	Cold shock protein domain
CRH09_RS28400	SM00357	Cold shock protein domain
CRH09_RS28425	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS28445	SM00354	helix_turn _helix lactose operon repressor
CRH09_RS28470	SM00422	helix_turn_helix, mercury resistance
CRH09_RS28530	SM00845	GatB domain
CRH09_RS28545	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS28560	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS28560	SM00448	cheY-homologous receiver domain
CRH09_RS28600	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS28600	SM00448	cheY-homologous receiver domain
CRH09_RS28645	SM00292	breast cancer carboxy-terminal domain
CRH09_RS28645	SM00532	Ligase N family
CRH09_RS28660	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS28670	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS28705	SM00563	Phosphate acyltransferases
CRH09_RS28730	SM00893	Electron transfer flavoprotein domain
CRH09_RS28735	SM00893	Electron transfer flavoprotein domain
CRH09_RS28755	SM00960	Roadblock/LC7 domain
CRH09_RS28785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS28785	SM00387	Histidine kinase-like ATPases
CRH09_RS28785	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS28790	SM00448	cheY-homologous receiver domain
CRH09_RS28790	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS28815	SM00564	beta-propeller repeat
CRH09_RS28840	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS28880	SM00480	DNA polymerase III beta subunit
CRH09_RS28905	SM00448	cheY-homologous receiver domain
CRH09_RS28905	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS28910	SM00387	Histidine kinase-like ATPases
CRH09_RS28910	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS28920	SM00387	Histidine kinase-like ATPases
CRH09_RS28920	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS28965	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH09_RS28970	SM00852	Probable molybdopterin binding domain
CRH09_RS28975	SM00852	Probable molybdopterin binding domain
CRH09_RS29010	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CRH09_RS29085	SM00829	Enoylreductase
CRH09_RS29095	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS29110	SM00387	Histidine kinase-like ATPases
CRH09_RS29110	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS29115	SM00448	cheY-homologous receiver domain
CRH09_RS29115	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS29190	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS29195	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS29290	SM00344	helix_turn_helix ASNC type
CRH09_RS29315	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS29325	SM00245	tail specific protease
CRH09_RS29345	SM00387	Histidine kinase-like ATPases
CRH09_RS29350	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS29350	SM00448	cheY-homologous receiver domain
CRH09_RS29480	SM00740	CRH09_RS29480
CRH09_RS29490	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS29495	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS29500	SM00357	Cold shock protein domain
CRH09_RS29560	SM00636	CRH09_RS29560
CRH09_RS29585	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CRH09_RS29595	SM00344	helix_turn_helix ASNC type
CRH09_RS29605	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS29735	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CRH09_RS29740	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CRH09_RS29745	SM00354	helix_turn _helix lactose operon repressor
CRH09_RS29760	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS29795	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS29810	SM00860	SMI1 / KNR4 family
CRH09_RS29820	SM00507	HNH nucleases
CRH09_RS29830	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS29885	SM00357	Cold shock protein domain
CRH09_RS29920	SM00481	DNA polymerase alpha chain like domain
CRH09_RS29955	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS29955	SM00448	cheY-homologous receiver domain
CRH09_RS29985	SM00823	Phosphopantetheine attachment site
CRH09_RS29990	SM00823	Phosphopantetheine attachment site
CRH09_RS29995	SM00923	MbtH-like protein
CRH09_RS30035	SM00822	CRH09_RS30035
CRH09_RS30040	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS30040	SM01043	Bacterial transcriptional activator domain
CRH09_RS30045	SM00470	ParB-like nuclease domain
CRH09_RS30085	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS30085	SM01043	Bacterial transcriptional activator domain
CRH09_RS30115	SM00823	Phosphopantetheine attachment site
CRH09_RS30115	SM00824	Thioesterase
CRH09_RS30115	SM00825	Beta-ketoacyl synthase
CRH09_RS30115	SM00826	CRH09_RS30115
CRH09_RS30115	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS30125	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS30150	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH09_RS30180	SM00849	Metallo-beta-lactamase superfamily
CRH09_RS30220	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CRH09_RS30260	SM00487	DEAD-like helicases superfamily
CRH09_RS30305	SM00857	Resolvase, N terminal domain
CRH09_RS30375	SM00392	Profilin
CRH09_RS30455	SM00320	WD40 repeats
CRH09_RS30460	SM00974	CRH09_RS30460
CRH09_RS30465	SM00671	Sel1-like repeats.
CRH09_RS30485	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CRH09_RS30545	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS30550	SM00487	DEAD-like helicases superfamily
CRH09_RS30555	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CRH09_RS30655	SM01110	CRH09_RS30655
CRH09_RS30680	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS30790	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS30820	SM00448	cheY-homologous receiver domain
CRH09_RS30820	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS30825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS30825	SM00387	Histidine kinase-like ATPases
CRH09_RS30825	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS30940	SM00923	MbtH-like protein
CRH09_RS30945	SM00823	Phosphopantetheine attachment site
CRH09_RS30945	SM00824	Thioesterase
CRH09_RS30950	SM00823	Phosphopantetheine attachment site
CRH09_RS30960	SM00823	Phosphopantetheine attachment site
CRH09_RS30965	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS30975	SM00470	ParB-like nuclease domain
CRH09_RS30980	SM00470	ParB-like nuclease domain
CRH09_RS31195	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS31200	SM00867	YceI-like domain 
CRH09_RS31205	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS31230	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS31300	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS31340	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS31345	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS31355	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS31355	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS31385	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS31445	SM00341	Helicase and RNase D C-terminal
CRH09_RS31445	SM00487	DEAD-like helicases superfamily
CRH09_RS31445	SM00490	helicase superfamily c-terminal domain
CRH09_RS31445	SM00956	CRH09_RS31445
CRH09_RS31470	SM00758	CRH09_RS31470
CRH09_RS31545	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS31595	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CRH09_RS31615	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS31630	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS31640	SM00937	CRH09_RS31640
CRH09_RS31690	SM00267	diguanylate cyclase
CRH09_RS31720	SM01060	CRH09_RS31720
CRH09_RS31785	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS31805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS31805	SM00387	Histidine kinase-like ATPases
CRH09_RS31805	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS31810	SM00448	cheY-homologous receiver domain
CRH09_RS31810	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS31860	SM00062	Bacterial periplasmic substrate-binding proteins
CRH09_RS31870	SM00450	Rhodanese Homology Domain
CRH09_RS31885	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CRH09_RS31885	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CRH09_RS31915	SM00028	Tetratricopeptide repeats
CRH09_RS31930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS31930	SM00895	CRH09_RS31930
CRH09_RS31985	SM00320	WD40 repeats
CRH09_RS32000	SM00861	Transketolase, pyrimidine binding domain
CRH09_RS32005	SM00957	SecA DEAD-like domain
CRH09_RS32005	SM00958	SecA preprotein cross-linking domain
CRH09_RS32055	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH09_RS32080	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS32095	SM00341	Helicase and RNase D C-terminal
CRH09_RS32100	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS32160	SM00852	Probable molybdopterin binding domain
CRH09_RS32195	SM00823	Phosphopantetheine attachment site
CRH09_RS32200	SM00903	Flavin reductase like domain
CRH09_RS32270	SM01012	CRH09_RS32270
CRH09_RS32275	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CRH09_RS32275	SM01012	CRH09_RS32275
CRH09_RS32305	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS32325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS32325	SM00895	CRH09_RS32325
CRH09_RS32340	SM00450	Rhodanese Homology Domain
CRH09_RS32370	SM00487	DEAD-like helicases superfamily
CRH09_RS32370	SM00490	helicase superfamily c-terminal domain
CRH09_RS32385	SM00855	Phosphoglycerate mutase family
CRH09_RS32400	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CRH09_RS32410	SM00387	Histidine kinase-like ATPases
CRH09_RS32410	SM00911	HWE histidine kinase
CRH09_RS32435	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS32480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS32480	SM00895	CRH09_RS32480
CRH09_RS32500	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CRH09_RS32510	SM00957	SecA DEAD-like domain
CRH09_RS32510	SM00958	SecA preprotein cross-linking domain
CRH09_RS32565	SM00909	Sporulation and spore germination
CRH09_RS32570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS32570	SM00387	Histidine kinase-like ATPases
CRH09_RS32570	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS32575	SM00448	cheY-homologous receiver domain
CRH09_RS32575	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS32585	SM00996	S-adenosyl-L-homocysteine hydrolase
CRH09_RS32585	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CRH09_RS32595	SM00448	cheY-homologous receiver domain
CRH09_RS32600	SM00387	Histidine kinase-like ATPases
CRH09_RS32745	SM00327	von Willebrand factor (vWF) type A domain
CRH09_RS32805	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS32820	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS32825	SM00014	Acid phosphatase homologues
CRH09_RS32845	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS32850	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS32855	SM00518	AP endonuclease family 2
CRH09_RS32980	SM00487	DEAD-like helicases superfamily
CRH09_RS32980	SM00490	helicase superfamily c-terminal domain
CRH09_RS33060	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS33070	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS33080	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS33090	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS33095	SM00861	Transketolase, pyrimidine binding domain
CRH09_RS33115	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH09_RS33125	SM01120	CRH09_RS33125
CRH09_RS33150	SM00822	CRH09_RS33150
CRH09_RS33185	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS33225	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS33225	SM00448	cheY-homologous receiver domain
CRH09_RS33245	SM00448	cheY-homologous receiver domain
CRH09_RS33245	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS33250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS33250	SM00387	Histidine kinase-like ATPases
CRH09_RS33250	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS33265	SM00919	Malic enzyme, NAD binding domain
CRH09_RS33265	SM01274	CRH09_RS33265
CRH09_RS33280	SM00481	DNA polymerase alpha chain like domain
CRH09_RS33300	SM00924	MgtE intracellular N domain
CRH09_RS33380	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS33405	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH09_RS33460	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS33525	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH09_RS33555	SM00387	Histidine kinase-like ATPases
CRH09_RS33575	SM00838	Elongation factor G C-terminus
CRH09_RS33625	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS33670	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS33675	SM00422	helix_turn_helix, mercury resistance
CRH09_RS33695	SM00829	Enoylreductase
CRH09_RS33730	SM00944	Pro-kumamolisin, activation domain
CRH09_RS33735	SM00028	Tetratricopeptide repeats
CRH09_RS33765	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS33765	SM00478	endonuclease III
CRH09_RS33765	SM01009	AlkA N-terminal domain
CRH09_RS33855	SM00670	Large family of predicted nucleotide-binding domains
CRH09_RS33935	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS33945	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS33980	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS33985	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH09_RS33985	SM00876	Biotin and Thiamin Synthesis associated domain
CRH09_RS34000	SM00534	ATPase domain of DNA mismatch repair MUTS family
CRH09_RS34005	SM00534	ATPase domain of DNA mismatch repair MUTS family
CRH09_RS34015	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS34035	SM00422	helix_turn_helix, mercury resistance
CRH09_RS34090	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CRH09_RS34090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS34135	SM00344	helix_turn_helix ASNC type
CRH09_RS34145	SM00822	CRH09_RS34145
CRH09_RS34155	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS34155	SM01043	Bacterial transcriptional activator domain
CRH09_RS34210	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH09_RS34285	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS34300	SM00822	CRH09_RS34300
CRH09_RS34495	SM00014	Acid phosphatase homologues
CRH09_RS34500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS34500	SM00387	Histidine kinase-like ATPases
CRH09_RS34500	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS34505	SM00448	cheY-homologous receiver domain
CRH09_RS34505	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS34560	SM01192	CRH09_RS34560
CRH09_RS34560	SM01193	CRH09_RS34560
CRH09_RS34570	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS34655	SM00487	DEAD-like helicases superfamily
CRH09_RS34655	SM00490	helicase superfamily c-terminal domain
CRH09_RS34655	SM00982	CRH09_RS34655
CRH09_RS34655	SM01058	CarD-like/TRCF domain
CRH09_RS34680	SM01400	CRH09_RS34680
CRH09_RS34765	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS34785	SM00650	Ribosomal RNA adenine dimethylases
CRH09_RS34800	SM00822	CRH09_RS34800
CRH09_RS34805	SM01208	CRH09_RS34805
CRH09_RS34825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS34855	SM00052	Putative diguanylate phosphodiesterase
CRH09_RS34855	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CRH09_RS34855	SM00267	diguanylate cyclase
CRH09_RS34865	SM00871	Bacterial transcription activator, effector binding domain
CRH09_RS34870	SM00986	Uracil DNA glycosylase superfamily
CRH09_RS34870	SM00987	UreE urease accessory protein, C-terminal domain 
CRH09_RS34935	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS34995	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS35015	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS35055	SM00829	Enoylreductase
CRH09_RS35085	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS35085	SM01043	Bacterial transcriptional activator domain
CRH09_RS35095	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS35110	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS35130	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CRH09_RS35130	SM01012	CRH09_RS35130
CRH09_RS35135	SM01012	CRH09_RS35135
CRH09_RS35155	SM00822	CRH09_RS35155
CRH09_RS35165	SM01043	Bacterial transcriptional activator domain
CRH09_RS35200	SM00858	CRH09_RS35200
CRH09_RS35265	SM00830	Chorismate mutase type II
CRH09_RS35345	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS35355	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH09_RS35370	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS35395	SM00346	helix_turn_helix isocitrate lyase regulation
CRH09_RS35405	SM01130	CRH09_RS35405
CRH09_RS35415	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CRH09_RS35445	SM00852	Probable molybdopterin binding domain
CRH09_RS35460	SM00834	Putative regulatory protein
CRH09_RS35465	SM00858	CRH09_RS35465
CRH09_RS35485	SM00852	Probable molybdopterin binding domain
CRH09_RS35490	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH09_RS35495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS35495	SM00387	Histidine kinase-like ATPases
CRH09_RS35495	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS35500	SM00448	cheY-homologous receiver domain
CRH09_RS35500	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS35505	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS35505	SM00387	Histidine kinase-like ATPases
CRH09_RS35510	SM00960	Roadblock/LC7 domain
CRH09_RS35555	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CRH09_RS35580	SM00108	Bulb-type mannose-specific lectin
CRH09_RS35580	SM00257	Lysin motif
CRH09_RS35590	SM00798	AICARFT/IMPCHase bienzyme
CRH09_RS35590	SM00851	MGS-like domain
CRH09_RS35610	SM00881	CoA binding domain
CRH09_RS35630	SM00830	Chorismate mutase type II
CRH09_RS35680	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS35700	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CRH09_RS35700	SM01232	CRH09_RS35700
CRH09_RS35750	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS35760	SM00474	3'-5' exonuclease
CRH09_RS35760	SM00482	DNA polymerase A domain
CRH09_RS35810	SM01040	BRO family, N-terminal domain
CRH09_RS35835	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS35890	SM00507	HNH nucleases
CRH09_RS36015	SM00644	CRH09_RS36015
CRH09_RS36045	SM00857	Resolvase, N terminal domain
CRH09_RS36090	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS36095	SM00823	Phosphopantetheine attachment site
CRH09_RS36140	SM00946	Prolyl-tRNA synthetase, C-terminal
CRH09_RS36155	SM01400	CRH09_RS36155
CRH09_RS36195	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS36230	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS36230	SM00448	cheY-homologous receiver domain
CRH09_RS36235	SM00387	Histidine kinase-like ATPases
CRH09_RS36245	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS36280	SM00878	Biotin carboxylase C-terminal domain
CRH09_RS36335	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS36380	SM00344	helix_turn_helix ASNC type
CRH09_RS36395	SM00838	Elongation factor G C-terminus
CRH09_RS36395	SM00889	Elongation factor G, domain IV
CRH09_RS36425	SM00344	helix_turn_helix ASNC type
CRH09_RS36435	SM00829	Enoylreductase
CRH09_RS36460	SM00855	Phosphoglycerate mutase family
CRH09_RS36470	SM00422	helix_turn_helix, mercury resistance
CRH09_RS36480	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS36495	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH09_RS36505	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS36520	SM00663	RNA polymerase I subunit A N-terminus
CRH09_RS36580	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS36600	SM00649	Ribosomal protein L11/L12
CRH09_RS36605	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CRH09_RS36665	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS36705	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CRH09_RS36780	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS36790	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS36790	SM01043	Bacterial transcriptional activator domain
CRH09_RS36835	SM01130	CRH09_RS36835
CRH09_RS36885	SM00855	Phosphoglycerate mutase family
CRH09_RS36915	SM01004	Delta-aminolevulinic acid dehydratase
CRH09_RS36950	SM00881	CoA binding domain
CRH09_RS36965	SM00563	Phosphate acyltransferases
CRH09_RS36975	SM01155	CRH09_RS36975
CRH09_RS37025	SM00448	cheY-homologous receiver domain
CRH09_RS37025	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS37030	SM00387	Histidine kinase-like ATPases
CRH09_RS37030	SM00388	His Kinase A (phosphoacceptor) domain
CRH09_RS37035	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CRH09_RS37040	SM00855	Phosphoglycerate mutase family
CRH09_RS37105	SM01133	CRH09_RS37105
CRH09_RS37140	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS37195	SM00756	CRH09_RS37195
CRH09_RS37200	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH09_RS37210	SM00829	Enoylreductase
CRH09_RS37260	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CRH09_RS37305	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS37360	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH09_RS37360	SM01134	CRH09_RS37360
CRH09_RS37380	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS37490	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS37500	SM00100	Cyclic nucleotide-monophosphate binding domain
CRH09_RS37500	SM00387	Histidine kinase-like ATPases
CRH09_RS37505	SM00448	cheY-homologous receiver domain
CRH09_RS37535	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS37535	SM01072	Cell division protein 48 (CDC48) domain 2
CRH09_RS37535	SM01073	Cell division protein 48 (CDC48) N-terminal domain
CRH09_RS37655	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CRH09_RS37690	SM00878	Biotin carboxylase C-terminal domain
CRH09_RS37710	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CRH09_RS37720	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS37755	SM00062	Bacterial periplasmic substrate-binding proteins
CRH09_RS37760	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH09_RS37805	SM00450	Rhodanese Homology Domain
CRH09_RS37845	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS37865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH09_RS37870	SM00788	Adenylosuccinate synthetase
CRH09_RS37925	SM00240	Forkhead associated domain
CRH09_RS37925	SM00862	Transcriptional regulatory protein, C terminal
CRH09_RS37925	SM01043	Bacterial transcriptional activator domain
CRH09_RS37940	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS37980	SM00387	Histidine kinase-like ATPases
CRH09_RS37985	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS37985	SM00448	cheY-homologous receiver domain
CRH09_RS38025	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS38025	SM01086	C-terminal, D2-small domain, of ClpB protein
CRH09_RS38030	SM00829	Enoylreductase
CRH09_RS38050	SM00422	helix_turn_helix, mercury resistance
CRH09_RS38055	SM00271	DnaJ molecular chaperone homology domain
CRH09_RS38075	SM00829	Enoylreductase
CRH09_RS38105	SM00421	helix_turn_helix, Lux Regulon
CRH09_RS38155	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS38185	SM00984	UDP binding domain
CRH09_RS38230	SM01110	CRH09_RS38230
CRH09_RS38255	SM00829	Enoylreductase
CRH09_RS38290	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS38435	SM00267	diguanylate cyclase
CRH09_RS38445	SM01350	CRH09_RS38445
CRH09_RS38465	SM00822	CRH09_RS38465
CRH09_RS38595	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CRH09_RS38595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH09_RS38625	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS38635	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS38710	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS38740	SM00822	CRH09_RS38740
CRH09_RS38750	SM00641	Glycosyl hydrolases family 25
CRH09_RS38760	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS38765	SM00062	Bacterial periplasmic substrate-binding proteins
CRH09_RS38775	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS38790	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CRH09_RS38880	SM00422	helix_turn_helix, mercury resistance
CRH09_RS38920	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS38925	SM00344	helix_turn_helix ASNC type
CRH09_RS38995	SM00822	CRH09_RS38995
CRH09_RS38995	SM00825	Beta-ketoacyl synthase
CRH09_RS38995	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH09_RS39015	SM00363	S4 RNA-binding domain
CRH09_RS39090	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH09_RS39110	SM00822	CRH09_RS39110
CRH09_RS39120	SM00357	Cold shock protein domain
CRH09_RS39150	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS39175	SM00829	Enoylreductase
CRH09_RS39180	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS39185	SM00342	helix_turn_helix, arabinose operon control protein
CRH09_RS39195	SM01110	CRH09_RS39195
CRH09_RS39230	SM00829	Enoylreductase
CRH09_RS39260	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS39260	SM00464	Found in ATP-dependent protease La (LON)
CRH09_RS39280	SM00829	Enoylreductase
CRH09_RS39405	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS39420	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS39460	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS39485	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CRH09_RS39525	SM00646	CRH09_RS39525
CRH09_RS39535	SM00470	ParB-like nuclease domain
CRH09_RS39550	SM00393	Putative single-stranded nucleic acids-binding domain
CRH09_RS39560	SM01234	CRH09_RS39560
CRH09_RS39640	SM00382	ATPases associated with a variety of cellular activities
CRH09_RS39845	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS39910	SM00530	Helix-turn-helix XRE-family like proteins 
CRH09_RS39920	SM01110	CRH09_RS39920
