locus-tag class description TQ38_RS00005 PF08335 GlnD PII-uridylyltransferase TQ38_RS00005 PF03710 Glutamate-ammonia ligase adenylyltransferase TQ38_RS00010 PF00578 AhpC/TSA family TQ38_RS00015 PF04305 Protein of unknown function (DUF455) TQ38_RS00020 PF08525 Opacity-associated protein A N-terminal motif TQ38_RS00020 PF01476 LysM domain TQ38_RS00020 PF01551 Peptidase family M23 TQ38_RS00030 PF04055 Radical SAM superfamily TQ38_RS00050 PF05751 FixH TQ38_RS00055 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TQ38_RS00055 PF13746 4Fe-4S dicluster domain TQ38_RS00055 PF12801 4Fe-4S binding domain TQ38_RS00060 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP TQ38_RS00060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TQ38_RS00075 PF00115 Cytochrome C and Quinol oxidase polypeptide I TQ38_RS00080 PF03922 OmpW family TQ38_RS00090 PF13545 Crp-like helix-turn-helix domain TQ38_RS00090 PF00027 Cyclic nucleotide-binding domain TQ38_RS00095 PF00072 Response regulator receiver domain TQ38_RS00100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS00100 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS00110 PF03626 Prokaryotic Cytochrome C oxidase subunit IV TQ38_RS00115 PF00510 Cytochrome c oxidase subunit III TQ38_RS00120 PF00115 Cytochrome C and Quinol oxidase polypeptide I TQ38_RS00125 PF06481 COX Aromatic Rich Motif TQ38_RS00125 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TQ38_RS00130 PF07690 Major Facilitator Superfamily TQ38_RS00130 PF00083 Sugar (and other) transporter TQ38_RS00140 PF00872 Transposase, Mutator family TQ38_RS00190 PF04349 Periplasmic glucan biosynthesis protein, MdoG TQ38_RS00195 PF13632 Glycosyl transferase family group 2 TQ38_RS00200 PF07685 CobB/CobQ-like glutamine amidotransferase domain TQ38_RS00200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TQ38_RS00205 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS00205 PF00593 TonB dependent receptor TQ38_RS00215 PF02277 Phosphoribosyltransferase TQ38_RS00225 PF02654 Cobalamin-5-phosphate synthase TQ38_RS00230 PF00155 Aminotransferase class I and II TQ38_RS00235 PF03186 CobD/Cbib protein TQ38_RS00240 PF07685 CobB/CobQ-like glutamine amidotransferase domain TQ38_RS00245 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TQ38_RS00260 PF00270 DEAD/DEAH box helicase TQ38_RS00260 PF00271 Helicase conserved C-terminal domain TQ38_RS00275 PF05977 Transmembrane secretion effector TQ38_RS00285 PF01435 Peptidase family M48 TQ38_RS00295 PF07694 5TMR of 5TMR-LYT TQ38_RS00295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS00295 PF06580 Histidine kinase TQ38_RS00300 PF04397 LytTr DNA-binding domain TQ38_RS00300 PF00072 Response regulator receiver domain TQ38_RS00305 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TQ38_RS00305 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TQ38_RS00315 PF14437 MafB19-like deaminase TQ38_RS00320 PF00830 Ribosomal L28 family TQ38_RS00340 PF13742 OB-fold nucleic acid binding domain TQ38_RS00340 PF02601 Exonuclease VII, large subunit TQ38_RS00345 PF02844 Phosphoribosylglycinamide synthetase, N domain TQ38_RS00345 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TQ38_RS00345 PF02843 Phosphoribosylglycinamide synthetase, C domain TQ38_RS00360 PF00294 pfkB family carbohydrate kinase TQ38_RS00370 PF01545 Cation efflux family TQ38_RS00370 PF16916 Dimerisation domain of Zinc Transporter TQ38_RS00375 PF01243 Pyridoxamine 5'-phosphate oxidase TQ38_RS00375 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region TQ38_RS00380 PF00226 DnaJ domain TQ38_RS00380 PF01556 DnaJ C terminal domain TQ38_RS00380 PF00684 DnaJ central domain TQ38_RS00385 PF03631 Virulence factor BrkB TQ38_RS00395 PF01925 Sulfite exporter TauE/SafE TQ38_RS00405 PF03232 Ubiquinone biosynthesis protein COQ7 TQ38_RS00410 PF02600 Disulfide bond formation protein DsbB TQ38_RS00415 PF03572 Peptidase family S41 TQ38_RS00415 PF13180 PDZ domain TQ38_RS00430 PF02590 Predicted SPOUT methyltransferase TQ38_RS00440 PF01467 Cytidylyltransferase-like TQ38_RS00445 PF00171 Aldehyde dehydrogenase family TQ38_RS00450 PF01551 Peptidase family M23 TQ38_RS00465 PF00698 Acyl transferase domain TQ38_RS00465 PF08659 KR domain TQ38_RS00465 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS00465 PF14765 Polyketide synthase dehydratase TQ38_RS00465 PF00550 Phosphopantetheine attachment site TQ38_RS00475 PF00004 ATPase family associated with various cellular activities (AAA) TQ38_RS00475 PF07724 AAA domain (Cdc48 subfamily) TQ38_RS00475 PF17871 AAA lid domain TQ38_RS00475 PF10431 C-terminal, D2-small domain, of ClpB protein TQ38_RS00475 PF02861 Clp amino terminal domain, pathogenicity island component TQ38_RS00485 PF04679 ATP dependent DNA ligase C terminal region TQ38_RS00485 PF01068 ATP dependent DNA ligase domain TQ38_RS00485 PF04675 DNA ligase N terminus TQ38_RS00490 PF02594 Uncharacterised ACR, YggU family COG1872 TQ38_RS00495 PF00132 Bacterial transferase hexapeptide (six repeats) TQ38_RS00510 PF00490 Delta-aminolevulinic acid dehydratase TQ38_RS00515 PF01551 Peptidase family M23 TQ38_RS00515 PF04225 Opacity-associated protein A LysM-like domain TQ38_RS00530 PF00037 4Fe-4S binding domain TQ38_RS00530 PF11953 Domain of unknown function (DUF3470) TQ38_RS00535 PF02559 CarD-like/TRCF domain TQ38_RS00545 PF03481 Putative GTP-binding controlling metal-binding TQ38_RS00545 PF01300 Telomere recombination TQ38_RS00555 PF07995 Glucose / Sorbosone dehydrogenase TQ38_RS00560 PF13185 GAF domain TQ38_RS00570 PF02195 ParB-like nuclease domain TQ38_RS00570 PF17762 HTH domain found in ParB protein TQ38_RS00575 PF13614 AAA domain TQ38_RS00580 PF02527 rRNA small subunit methyltransferase G TQ38_RS00585 PF01134 Glucose inhibited division protein A TQ38_RS00585 PF13932 GidA associated domain TQ38_RS00590 PF01926 50S ribosome-binding GTPase TQ38_RS00590 PF12631 MnmE helical domain TQ38_RS00590 PF10396 GTP-binding protein TrmE N-terminus TQ38_RS00600 PF01738 Dienelactone hydrolase family TQ38_RS00605 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS00605 PF00107 Zinc-binding dehydrogenase TQ38_RS00610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TQ38_RS00610 PF07498 Rho termination factor, N-terminal domain TQ38_RS00610 PF07497 Rho termination factor, RNA-binding domain TQ38_RS00620 PF03653 Uncharacterised protein family (UPF0093) TQ38_RS00625 PF01208 Uroporphyrinogen decarboxylase (URO-D) TQ38_RS00630 PF03618 Kinase/pyrophosphorylase TQ38_RS00635 PF02545 Maf-like protein TQ38_RS00640 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TQ38_RS00640 PF08501 Shikimate dehydrogenase substrate binding domain TQ38_RS00645 PF01121 Dephospho-CoA kinase TQ38_RS00650 PF00929 Exonuclease TQ38_RS00655 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus TQ38_RS00655 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TQ38_RS00660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TQ38_RS00685 PF01521 Iron-sulphur cluster biosynthesis TQ38_RS00715 PF02321 Outer membrane efflux protein TQ38_RS00725 PF05683 Fumarase C-terminus TQ38_RS00725 PF05681 Fumarate hydratase (Fumerase) TQ38_RS00730 PF03466 LysR substrate binding domain TQ38_RS00730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS00735 PF01039 Carboxyl transferase domain TQ38_RS00745 PF02785 Biotin carboxylase C-terminal domain TQ38_RS00745 PF00364 Biotin-requiring enzyme TQ38_RS00745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TQ38_RS00745 PF00289 Biotin carboxylase, N-terminal domain TQ38_RS00755 PF06580 Histidine kinase TQ38_RS00755 PF02743 Cache domain TQ38_RS00755 PF00672 HAMP domain TQ38_RS00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS00760 PF00072 Response regulator receiver domain TQ38_RS00760 PF04397 LytTr DNA-binding domain TQ38_RS00815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TQ38_RS00820 PF00483 Nucleotidyl transferase TQ38_RS00825 PF06574 FAD synthetase TQ38_RS00825 PF01687 Riboflavin kinase TQ38_RS00830 PF00186 Dihydrofolate reductase TQ38_RS00835 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain TQ38_RS00835 PF02222 ATP-grasp domain TQ38_RS00840 PF00731 AIR carboxylase TQ38_RS00845 PF00300 Histidine phosphatase superfamily (branch 1) TQ38_RS00860 PF02333 Phytase TQ38_RS00865 PF01464 Transglycosylase SLT domain TQ38_RS00865 PF10145 Phage-related minor tail protein TQ38_RS00865 PF01551 Peptidase family M23 TQ38_RS00870 PF00133 tRNA synthetases class I (I, L, M and V) TQ38_RS00870 PF08264 Anticodon-binding domain of tRNA TQ38_RS00875 PF01252 Signal peptidase (SPase) II TQ38_RS00885 PF00571 CBS domain TQ38_RS00885 PF03471 Transporter associated domain TQ38_RS00885 PF01595 Cyclin M transmembrane N-terminal domain TQ38_RS00890 PF00691 OmpA family TQ38_RS00890 PF13488 Glycine zipper TQ38_RS00900 PF00459 Inositol monophosphatase family TQ38_RS00905 PF00549 CoA-ligase TQ38_RS00905 PF08442 ATP-grasp domain TQ38_RS00910 PF01012 Electron transfer flavoprotein domain TQ38_RS00915 PF00766 Electron transfer flavoprotein FAD-binding domain TQ38_RS00915 PF01012 Electron transfer flavoprotein domain TQ38_RS00930 PF04286 Protein of unknown function (DUF445) TQ38_RS00935 PF00873 AcrB/AcrD/AcrF family TQ38_RS00940 PF13533 Biotin-lipoyl like TQ38_RS00970 PF01521 Iron-sulphur cluster biosynthesis TQ38_RS00980 PF01883 Iron-sulfur cluster assembly protein TQ38_RS00985 PF00266 Aminotransferase class-V TQ38_RS00990 PF01458 Uncharacterized protein family (UPF0051) TQ38_RS00995 PF00005 ABC transporter TQ38_RS01000 PF04480 Protein of unknown function (DUF559) TQ38_RS01005 PF01458 Uncharacterized protein family (UPF0051) TQ38_RS01015 PF01180 Dihydroorotate dehydrogenase TQ38_RS01025 PF00501 AMP-binding enzyme TQ38_RS01030 PF01699 Sodium/calcium exchanger protein TQ38_RS01035 PF10005 zinc-ribbon domain TQ38_RS01035 PF15887 Putative zinc-binding metallo-peptidase TQ38_RS01045 PF05690 Thiazole biosynthesis protein ThiG TQ38_RS01050 PF02597 ThiS family TQ38_RS01050 PF05690 Thiazole biosynthesis protein ThiG TQ38_RS01060 PF02628 Cytochrome oxidase assembly protein TQ38_RS01065 PF00572 Ribosomal protein L13 TQ38_RS01070 PF00380 Ribosomal protein S9/S16 TQ38_RS01075 PF01037 Lrp/AsnC ligand binding domain TQ38_RS01080 PF00892 EamA-like transporter family TQ38_RS01100 PF08264 Anticodon-binding domain of tRNA TQ38_RS01100 PF13603 Leucyl-tRNA synthetase, Domain 2 TQ38_RS01100 PF00133 tRNA synthetases class I (I, L, M and V) TQ38_RS01115 PF02397 Bacterial sugar transferase TQ38_RS01145 PF03167 Uracil DNA glycosylase superfamily TQ38_RS01155 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS01155 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TQ38_RS01160 PF04898 Glutamate synthase central domain TQ38_RS01160 PF01645 Conserved region in glutamate synthase TQ38_RS01160 PF00310 Glutamine amidotransferases class-II TQ38_RS01160 PF01493 GXGXG motif TQ38_RS01170 PF00534 Glycosyl transferases group 1 TQ38_RS01170 PF13439 Glycosyltransferase Family 4 TQ38_RS01185 PF00072 Response regulator receiver domain TQ38_RS01185 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS01195 PF03788 LrgA family TQ38_RS01200 PF02390 Putative methyltransferase TQ38_RS01205 PF00390 Malic enzyme, N-terminal domain TQ38_RS01205 PF01515 Phosphate acetyl/butaryl transferase TQ38_RS01205 PF03949 Malic enzyme, NAD binding domain TQ38_RS01210 PF00488 MutS domain V TQ38_RS01210 PF05190 MutS family domain IV TQ38_RS01210 PF05192 MutS domain III TQ38_RS01210 PF01624 MutS domain I TQ38_RS01210 PF05188 MutS domain II TQ38_RS01225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TQ38_RS01225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TQ38_RS01230 PF01923 Cobalamin adenosyltransferase TQ38_RS01240 PF00749 tRNA synthetases class I (E and Q), catalytic domain TQ38_RS01260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TQ38_RS01260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TQ38_RS01260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TQ38_RS01260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TQ38_RS01265 PF06906 Protein of unknown function (DUF1272) TQ38_RS01270 PF08543 Phosphomethylpyrimidine kinase TQ38_RS01275 PF03641 Possible lysine decarboxylase TQ38_RS01280 PF17676 LD-carboxypeptidase C-terminal domain TQ38_RS01280 PF02016 LD-carboxypeptidase N-terminal domain TQ38_RS01300 PF03170 Bacterial cellulose synthase subunit TQ38_RS01300 PF03552 Cellulose synthase TQ38_RS01300 PF00535 Glycosyl transferase family 2 TQ38_RS01300 PF07238 PilZ domain TQ38_RS01305 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) TQ38_RS01315 PF01270 Glycosyl hydrolases family 8 TQ38_RS01320 PF07690 Major Facilitator Superfamily TQ38_RS01320 PF00083 Sugar (and other) transporter TQ38_RS01325 PF00593 TonB dependent receptor TQ38_RS01325 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS01330 PF03466 LysR substrate binding domain TQ38_RS01330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS01355 PF00771 FHIPEP family TQ38_RS01360 PF00158 Sigma-54 interaction domain TQ38_RS01360 PF02954 Bacterial regulatory protein, Fis family TQ38_RS01365 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TQ38_RS01370 PF08345 Flagellar M-ring protein C-terminal TQ38_RS01370 PF01514 Secretory protein of YscJ/FliF family TQ38_RS01375 PF00691 OmpA family TQ38_RS01375 PF13488 Glycine zipper TQ38_RS01385 PF01706 FliG C-terminal domain TQ38_RS01385 PF14841 FliG middle domain TQ38_RS01385 PF14842 FliG N-terminal domain TQ38_RS01405 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS01405 PF00072 Response regulator receiver domain TQ38_RS01435 PF02119 Flagellar P-ring protein TQ38_RS01445 PF01312 FlhB HrpN YscU SpaS Family TQ38_RS01450 PF01311 Bacterial export proteins, family 1 TQ38_RS01455 PF01313 Bacterial export proteins, family 3 TQ38_RS01460 PF02049 Flagellar hook-basal body complex protein FliE TQ38_RS01465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TQ38_RS01465 PF00460 Flagella basal body rod protein TQ38_RS01470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TQ38_RS01475 PF04347 Flagellar biosynthesis protein, FliO TQ38_RS01480 PF00813 FliP family TQ38_RS01495 PF13677 Membrane MotB of proton-channel complex MotA/MotB TQ38_RS01495 PF00691 OmpA family TQ38_RS01500 PF01618 MotA/TolQ/ExbB proton channel family TQ38_RS01505 PF07309 Flagellar protein FlaF TQ38_RS01525 PF18269 T3SS EscN ATPase C-terminal domain TQ38_RS01525 PF02874 ATP synthase alpha/beta family, beta-barrel domain TQ38_RS01525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TQ38_RS01530 PF07378 Flagellar protein FlbT TQ38_RS01535 PF07559 Flagellar basal body protein FlaE TQ38_RS01535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TQ38_RS01535 PF00460 Flagella basal body rod protein TQ38_RS01575 PF02154 Flagellar motor switch protein FliM TQ38_RS01575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TQ38_RS01580 PF03748 Flagellar basal body-associated protein FliL TQ38_RS01585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TQ38_RS01585 PF00460 Flagella basal body rod protein TQ38_RS01590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TQ38_RS01590 PF00460 Flagella basal body rod protein TQ38_RS01600 PF02107 Flagellar L-ring protein TQ38_RS01605 PF00669 Bacterial flagellin N-terminal helical region TQ38_RS01605 PF00700 Bacterial flagellin C-terminal helical region TQ38_RS01615 PF14659 Phage integrase, N-terminal SAM-like domain TQ38_RS01615 PF00589 Phage integrase family TQ38_RS01615 PF13356 Arm DNA-binding domain TQ38_RS01630 PF01728 FtsJ-like methyltransferase TQ38_RS01635 PF00034 Cytochrome c TQ38_RS01640 PF00800 Prephenate dehydratase TQ38_RS01655 PF17863 AAA lid domain TQ38_RS01655 PF07726 ATPase family associated with various cellular activities (AAA) TQ38_RS01675 PF00583 Acetyltransferase (GNAT) family TQ38_RS01680 PF00583 Acetyltransferase (GNAT) family TQ38_RS01685 PF01544 CorA-like Mg2+ transporter protein TQ38_RS01690 PF04551 GcpE protein TQ38_RS01695 PF04998 RNA polymerase Rpb1, domain 5 TQ38_RS01695 PF04997 RNA polymerase Rpb1, domain 1 TQ38_RS01695 PF04983 RNA polymerase Rpb1, domain 3 TQ38_RS01695 PF00623 RNA polymerase Rpb1, domain 2 TQ38_RS01695 PF05000 RNA polymerase Rpb1, domain 4 TQ38_RS01700 PF00562 RNA polymerase Rpb2, domain 6 TQ38_RS01700 PF04565 RNA polymerase Rpb2, domain 3 TQ38_RS01700 PF04563 RNA polymerase beta subunit TQ38_RS01700 PF04560 RNA polymerase Rpb2, domain 7 TQ38_RS01700 PF04561 RNA polymerase Rpb2, domain 2 TQ38_RS01700 PF10385 RNA polymerase beta subunit external 1 domain TQ38_RS01715 PF13443 Cro/C1-type HTH DNA-binding domain TQ38_RS01725 PF00466 Ribosomal protein L10 TQ38_RS01730 PF00542 Ribosomal protein L7/L12 C-terminal domain TQ38_RS01730 PF16320 Ribosomal protein L7/L12 dimerisation domain TQ38_RS01735 PF00581 Rhodanese-like domain TQ38_RS01740 PF00255 Glutathione peroxidase TQ38_RS01745 PF01370 NAD dependent epimerase/dehydratase family TQ38_RS01755 PF01144 Coenzyme A transferase TQ38_RS01760 PF01144 Coenzyme A transferase TQ38_RS01765 PF03466 LysR substrate binding domain TQ38_RS01765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS01775 PF00034 Cytochrome c TQ38_RS01780 PF01554 MatE TQ38_RS01785 PF00166 Chaperonin 10 Kd subunit TQ38_RS01790 PF00118 TCP-1/cpn60 chaperonin family TQ38_RS01805 PF01612 3'-5' exonuclease TQ38_RS01805 PF00476 DNA polymerase family A TQ38_RS01805 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TQ38_RS01805 PF01367 5'-3' exonuclease, C-terminal SAM fold TQ38_RS01815 PF00313 'Cold-shock' DNA-binding domain TQ38_RS01825 PF01176 Translation initiation factor 1A / IF-1 TQ38_RS01835 PF01434 Peptidase family M41 TQ38_RS01835 PF06480 FtsH Extracellular TQ38_RS01835 PF17862 AAA+ lid domain TQ38_RS01835 PF00004 ATPase family associated with various cellular activities (AAA) TQ38_RS01845 PF00719 Inorganic pyrophosphatase TQ38_RS01855 PF13393 Histidyl-tRNA synthetase TQ38_RS01860 PF00472 RF-1 domain TQ38_RS01860 PF03462 PCRF domain TQ38_RS01865 PF05175 Methyltransferase small domain TQ38_RS01865 PF17827 PrmC N-terminal domain TQ38_RS01875 PF00795 Carbon-nitrogen hydrolase TQ38_RS01880 PF02773 S-adenosylmethionine synthetase, C-terminal domain TQ38_RS01880 PF00438 S-adenosylmethionine synthetase, N-terminal domain TQ38_RS01880 PF02772 S-adenosylmethionine synthetase, central domain TQ38_RS01885 PF08439 Oligopeptidase F TQ38_RS01885 PF01432 Peptidase family M3 TQ38_RS01890 PF00171 Aldehyde dehydrogenase family TQ38_RS01915 PF16177 Acetyl-coenzyme A synthetase N-terminus TQ38_RS01915 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS01915 PF00501 AMP-binding enzyme TQ38_RS01925 PF02515 CoA-transferase family III TQ38_RS01930 PF00106 short chain dehydrogenase TQ38_RS01935 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS01935 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS01935 PF00563 EAL domain TQ38_RS01955 PF00593 TonB dependent receptor TQ38_RS01955 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS01965 PF00360 Phytochrome region TQ38_RS01965 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS01965 PF01590 GAF domain TQ38_RS01965 PF00563 EAL domain TQ38_RS01975 PF01292 Prokaryotic cytochrome b561 TQ38_RS01980 PF00174 Oxidoreductase molybdopterin binding domain TQ38_RS02000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TQ38_RS02000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TQ38_RS02000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TQ38_RS02005 PF02350 UDP-N-acetylglucosamine 2-epimerase TQ38_RS02010 PF00692 dUTPase TQ38_RS02020 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS02020 PF00072 Response regulator receiver domain TQ38_RS02025 PF02702 Osmosensitive K+ channel His kinase sensor domain TQ38_RS02025 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS02025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS02025 PF13493 Domain of unknown function (DUF4118) TQ38_RS02025 PF13492 GAF domain TQ38_RS02030 PF02669 K+-transporting ATPase, c chain TQ38_RS02040 PF03814 Potassium-transporting ATPase A subunit TQ38_RS02055 PF02705 K+ potassium transporter TQ38_RS02060 PF02080 TrkA-C domain TQ38_RS02060 PF03600 Citrate transporter TQ38_RS02085 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) TQ38_RS02165 PF04984 Phage tail sheath protein subtilisin-like domain TQ38_RS02165 PF17482 Phage tail sheath C-terminal domain TQ38_RS02315 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS02315 PF00593 TonB dependent receptor TQ38_RS02330 PF10017 Histidine-specific methyltransferase, SAM-dependent TQ38_RS02335 PF12867 DinB superfamily TQ38_RS02335 PF03781 Sulfatase-modifying factor enzyme 1 TQ38_RS02360 PF07969 Amidohydrolase family TQ38_RS02370 PF00561 alpha/beta hydrolase fold TQ38_RS02385 PF13356 Arm DNA-binding domain TQ38_RS02385 PF00589 Phage integrase family TQ38_RS02425 PF13657 HipA N-terminal domain TQ38_RS02425 PF07804 HipA-like C-terminal domain TQ38_RS02445 PF17871 AAA lid domain TQ38_RS02445 PF00004 ATPase family associated with various cellular activities (AAA) TQ38_RS02445 PF07724 AAA domain (Cdc48 subfamily) TQ38_RS02445 PF02861 Clp amino terminal domain, pathogenicity island component TQ38_RS02445 PF10431 C-terminal, D2-small domain, of ClpB protein TQ38_RS02455 PF13086 AAA domain TQ38_RS02455 PF13195 Protein of unknown function (DUF4011) TQ38_RS02455 PF13087 AAA domain TQ38_RS02455 PF13086 AAA domain TQ38_RS02455 PF13195 Protein of unknown function (DUF4011) TQ38_RS02455 PF13087 AAA domain TQ38_RS02465 PF00565 Staphylococcal nuclease homologue TQ38_RS02490 PF01381 Helix-turn-helix TQ38_RS02495 PF08212 Lipocalin-like domain TQ38_RS02500 PF05930 Prophage CP4-57 regulatory protein (AlpA) TQ38_RS02505 PF18818 Metallopeptidase superfamily domain TQ38_RS02505 PF08401 Domain of unknown function (DUF1738) TQ38_RS02545 PF03389 MobA/MobL family TQ38_RS02545 PF17841 BID domain of Bartonella effector protein (Bep) TQ38_RS02545 PF01443 Viral (Superfamily 1) RNA helicase TQ38_RS02555 PF12728 Helix-turn-helix domain TQ38_RS02630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ TQ38_RS02635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TQ38_RS02635 PF00529 HlyD membrane-fusion protein of T1SS TQ38_RS02640 PF00664 ABC transporter transmembrane region TQ38_RS02640 PF00005 ABC transporter TQ38_RS02665 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS02665 PF00072 Response regulator receiver domain TQ38_RS02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS02670 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS02670 PF00672 HAMP domain TQ38_RS02670 PF00989 PAS fold TQ38_RS02690 PF01494 FAD binding domain TQ38_RS02695 PF04134 Protein of unknown function, DUF393 TQ38_RS02715 PF04542 Sigma-70 region 2 TQ38_RS02715 PF04545 Sigma-70, region 4 TQ38_RS02760 PF01370 NAD dependent epimerase/dehydratase family TQ38_RS02770 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS02770 PF00672 HAMP domain TQ38_RS02775 PF00072 Response regulator receiver domain TQ38_RS02775 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS02790 PF13192 Thioredoxin domain TQ38_RS02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS02795 PF00578 AhpC/TSA family TQ38_RS02795 PF10417 C-terminal domain of 1-Cys peroxiredoxin TQ38_RS02800 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TQ38_RS02810 PF01264 Chorismate synthase TQ38_RS02820 PF03960 ArsC family TQ38_RS02825 PF04973 Nicotinamide mononucleotide transporter TQ38_RS02840 PF00696 Amino acid kinase family TQ38_RS02840 PF13840 ACT domain TQ38_RS02840 PF01842 ACT domain TQ38_RS02845 PF00199 Catalase TQ38_RS02845 PF06628 Catalase-related immune-responsive TQ38_RS02855 PF03060 Nitronate monooxygenase TQ38_RS02860 PF00551 Formyl transferase TQ38_RS02870 PF07859 alpha/beta hydrolase fold TQ38_RS02905 PF03741 Integral membrane protein TerC family TQ38_RS02915 PF00849 RNA pseudouridylate synthase TQ38_RS02920 PF00085 Thioredoxin TQ38_RS02925 PF02445 Quinolinate synthetase A protein TQ38_RS02950 PF00391 PEP-utilising enzyme, mobile domain TQ38_RS02950 PF05524 PEP-utilising enzyme, N-terminal TQ38_RS02950 PF02896 PEP-utilising enzyme, TIM barrel domain TQ38_RS02965 PF01171 PP-loop family TQ38_RS02975 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS02985 PF12697 Alpha/beta hydrolase family TQ38_RS02990 PF07690 Major Facilitator Superfamily TQ38_RS03005 PF01209 ubiE/COQ5 methyltransferase family TQ38_RS03010 PF03109 ABC1 family TQ38_RS03020 PF02441 Flavoprotein TQ38_RS03020 PF04127 DNA / pantothenate metabolism flavoprotein TQ38_RS03025 PF00692 dUTPase TQ38_RS03045 PF03475 3-alpha domain TQ38_RS03045 PF03473 MOSC domain TQ38_RS03050 PF00579 tRNA synthetases class I (W and Y) TQ38_RS03055 PF03023 Lipid II flippase MurJ TQ38_RS03060 PF02556 Preprotein translocase subunit SecB TQ38_RS03085 PF00483 Nucleotidyl transferase TQ38_RS03085 PF01050 Mannose-6-phosphate isomerase TQ38_RS03090 PF01238 Phosphomannose isomerase type I TQ38_RS03100 PF00106 short chain dehydrogenase TQ38_RS03120 PF00155 Aminotransferase class I and II TQ38_RS03130 PF00072 Response regulator receiver domain TQ38_RS03130 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS03145 PF01312 FlhB HrpN YscU SpaS Family TQ38_RS03150 PF01311 Bacterial export proteins, family 1 TQ38_RS03155 PF01313 Bacterial export proteins, family 3 TQ38_RS03160 PF00813 FliP family TQ38_RS03170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TQ38_RS03195 PF18269 T3SS EscN ATPase C-terminal domain TQ38_RS03195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TQ38_RS03205 PF01706 FliG C-terminal domain TQ38_RS03205 PF14841 FliG middle domain TQ38_RS03205 PF14842 FliG N-terminal domain TQ38_RS03210 PF08345 Flagellar M-ring protein C-terminal TQ38_RS03210 PF01514 Secretory protein of YscJ/FliF family TQ38_RS03215 PF02049 Flagellar hook-basal body complex protein FliE TQ38_RS03220 PF02954 Bacterial regulatory protein, Fis family TQ38_RS03220 PF00158 Sigma-54 interaction domain TQ38_RS03220 PF00072 Response regulator receiver domain TQ38_RS03230 PF00700 Bacterial flagellin C-terminal helical region TQ38_RS03230 PF00669 Bacterial flagellin N-terminal helical region TQ38_RS03230 PF00669 Bacterial flagellin N-terminal helical region TQ38_RS03230 PF00700 Bacterial flagellin C-terminal helical region TQ38_RS03245 PF00691 OmpA family TQ38_RS03245 PF13677 Membrane MotB of proton-channel complex MotA/MotB TQ38_RS03250 PF01618 MotA/TolQ/ExbB proton channel family TQ38_RS03260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TQ38_RS03260 PF00460 Flagella basal body rod protein TQ38_RS03270 PF02119 Flagellar P-ring protein TQ38_RS03275 PF02107 Flagellar L-ring protein TQ38_RS03280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TQ38_RS03280 PF00460 Flagella basal body rod protein TQ38_RS03285 PF00460 Flagella basal body rod protein TQ38_RS03285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TQ38_RS03290 PF00460 Flagella basal body rod protein TQ38_RS03290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TQ38_RS03300 PF00460 Flagella basal body rod protein TQ38_RS03300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TQ38_RS03310 PF01618 MotA/TolQ/ExbB proton channel family TQ38_RS03340 PF00771 FHIPEP family TQ38_RS03345 PF04545 Sigma-70, region 4 TQ38_RS03345 PF04539 Sigma-70 region 3 TQ38_RS03345 PF04542 Sigma-70 region 2 TQ38_RS03350 PF01757 Acyltransferase family TQ38_RS03360 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase TQ38_RS03365 PF01494 FAD binding domain TQ38_RS03395 PF00664 ABC transporter transmembrane region TQ38_RS03395 PF00005 ABC transporter TQ38_RS03400 PF01431 Peptidase family M13 TQ38_RS03400 PF05649 Peptidase family M13 TQ38_RS03405 PF02673 Bacitracin resistance protein BacA TQ38_RS03410 PF03976 Polyphosphate kinase 2 (PPK2) TQ38_RS03415 PF00471 Ribosomal protein L33 TQ38_RS03425 PF03372 Endonuclease/Exonuclease/phosphatase family TQ38_RS03430 PF00925 GTP cyclohydrolase II TQ38_RS03435 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TQ38_RS03435 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TQ38_RS03435 PF06827 Zinc finger found in FPG and IleRS TQ38_RS03440 PF01649 Ribosomal protein S20 TQ38_RS03445 PF08299 Bacterial dnaA protein helix-turn-helix TQ38_RS03445 PF11638 DnaA N-terminal domain TQ38_RS03445 PF00308 Bacterial dnaA protein TQ38_RS03450 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS03460 PF00899 ThiF family TQ38_RS03465 PF02146 Sir2 family TQ38_RS03470 PF01113 Dihydrodipicolinate reductase, N-terminus TQ38_RS03470 PF05173 Dihydrodipicolinate reductase, C-terminus TQ38_RS03475 PF00730 HhH-GPD superfamily base excision DNA repair protein TQ38_RS03475 PF00633 Helix-hairpin-helix motif TQ38_RS03475 PF10576 Iron-sulfur binding domain of endonuclease III TQ38_RS03485 PF00375 Sodium:dicarboxylate symporter family TQ38_RS03490 PF01546 Peptidase family M20/M25/M40 TQ38_RS03490 PF07687 Peptidase dimerisation domain TQ38_RS03500 PF01641 SelR domain TQ38_RS03505 PF00905 Penicillin binding protein transpeptidase domain TQ38_RS03505 PF00912 Transglycosylase TQ38_RS03510 PF13180 PDZ domain TQ38_RS03520 PF01145 SPFH domain / Band 7 family TQ38_RS03525 PF10609 NUBPL iron-transfer P-loop NTPase TQ38_RS03530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TQ38_RS03530 PF00034 Cytochrome c TQ38_RS03530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TQ38_RS03535 PF00762 Ferrochelatase TQ38_RS03550 PF12804 MobA-like NTP transferase domain TQ38_RS03555 PF00072 Response regulator receiver domain TQ38_RS03555 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS03560 PF00155 Aminotransferase class I and II TQ38_RS03565 PF00561 alpha/beta hydrolase fold TQ38_RS03565 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus TQ38_RS03575 PF02617 ATP-dependent Clp protease adaptor protein ClpS TQ38_RS03600 PF00483 Nucleotidyl transferase TQ38_RS03605 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TQ38_RS03610 PF04321 RmlD substrate binding domain TQ38_RS03615 PF16363 GDP-mannose 4,6 dehydratase TQ38_RS03630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TQ38_RS03635 PF00210 Ferritin-like domain TQ38_RS03650 PF02358 Trehalose-phosphatase TQ38_RS03655 PF00723 Glycosyl hydrolases family 15 TQ38_RS03660 PF00982 Glycosyltransferase family 20 TQ38_RS03675 PF03099 Biotin/lipoate A/B protein ligase family TQ38_RS03690 PF03960 ArsC family TQ38_RS03695 PF00111 2Fe-2S iron-sulfur cluster binding domain TQ38_RS03695 PF01799 [2Fe-2S] binding domain TQ38_RS03705 PF01557 Fumarylacetoacetate (FAA) hydrolase family TQ38_RS03710 PF02622 Uncharacterized ACR, COG1678 TQ38_RS03725 PF03900 Porphobilinogen deaminase, C-terminal domain TQ38_RS03725 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TQ38_RS03730 PF00814 Glycoprotease family TQ38_RS03735 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TQ38_RS03735 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TQ38_RS03745 PF13505 Outer membrane protein beta-barrel domain TQ38_RS03745 PF00691 OmpA family TQ38_RS03750 PF00829 Ribosomal prokaryotic L21 protein TQ38_RS03760 PF00271 Helicase conserved C-terminal domain TQ38_RS03760 PF04851 Type III restriction enzyme, res subunit TQ38_RS03760 PF17757 UvrB interaction domain TQ38_RS03760 PF12344 Ultra-violet resistance protein B TQ38_RS03760 PF02151 UvrB/uvrC motif TQ38_RS03770 PF08241 Methyltransferase domain TQ38_RS03770 PF12697 Alpha/beta hydrolase family TQ38_RS03775 PF13335 Magnesium chelatase, subunit ChlI C-terminal TQ38_RS03775 PF01078 Magnesium chelatase, subunit ChlI TQ38_RS03790 PF00468 Ribosomal protein L34 TQ38_RS03795 PF00825 Ribonuclease P TQ38_RS03800 PF01809 Putative membrane protein insertion efficiency factor TQ38_RS03805 PF02096 60Kd inner membrane protein TQ38_RS03805 PF14849 YidC periplasmic domain TQ38_RS03810 PF01926 50S ribosome-binding GTPase TQ38_RS03815 PF01865 Protein of unknown function DUF47 TQ38_RS03820 PF01384 Phosphate transporter family TQ38_RS03825 PF00043 Glutathione S-transferase, C-terminal domain TQ38_RS03825 PF13417 Glutathione S-transferase, N-terminal domain TQ38_RS03840 PF00106 short chain dehydrogenase TQ38_RS03845 PF07670 Nucleoside recognition TQ38_RS03845 PF07662 Na+ dependent nucleoside transporter C-terminus TQ38_RS03845 PF01773 Na+ dependent nucleoside transporter N-terminus TQ38_RS03855 PF00696 Amino acid kinase family TQ38_RS03865 PF02325 YGGT family TQ38_RS03870 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TQ38_RS03870 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TQ38_RS03880 PF01914 MarC family integral membrane protein TQ38_RS03885 PF02694 Uncharacterised BCR, YnfA/UPF0060 family TQ38_RS03900 PF00085 Thioredoxin TQ38_RS03920 PF13847 Methyltransferase domain TQ38_RS03925 PF01523 Putative modulator of DNA gyrase TQ38_RS03935 PF00005 ABC transporter TQ38_RS03940 PF04963 Sigma-54 factor, core binding domain TQ38_RS03940 PF00309 Sigma-54 factor, Activator interacting domain (AID) TQ38_RS03940 PF04552 Sigma-54, DNA binding domain TQ38_RS03955 PF11799 impB/mucB/samB family C-terminal domain TQ38_RS03955 PF11798 IMS family HHH motif TQ38_RS03955 PF00817 impB/mucB/samB family TQ38_RS03960 PF07690 Major Facilitator Superfamily TQ38_RS03975 PF03641 Possible lysine decarboxylase TQ38_RS03985 PF01593 Flavin containing amine oxidoreductase TQ38_RS04005 PF03167 Uracil DNA glycosylase superfamily TQ38_RS04015 PF13667 ThiC-associated domain TQ38_RS04015 PF01964 Radical SAM ThiC family TQ38_RS04075 PF08274 PhnA Zinc-Ribbon TQ38_RS04075 PF03831 PhnA domain TQ38_RS04080 PF02566 OsmC-like protein TQ38_RS04090 PF13439 Glycosyltransferase Family 4 TQ38_RS04090 PF00534 Glycosyl transferases group 1 TQ38_RS04110 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS04110 PF00072 Response regulator receiver domain TQ38_RS04115 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS04115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS04115 PF00672 HAMP domain TQ38_RS04120 PF00484 Carbonic anhydrase TQ38_RS04125 PF01740 STAS domain TQ38_RS04125 PF00916 Sulfate permease family TQ38_RS04140 PF00679 Elongation factor G C-terminus TQ38_RS04140 PF00009 Elongation factor Tu GTP binding domain TQ38_RS04140 PF03144 Elongation factor Tu domain 2 TQ38_RS04145 PF00593 TonB dependent receptor TQ38_RS04145 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS04150 PF05656 Protein of unknown function (DUF805) TQ38_RS04160 PF00005 ABC transporter TQ38_RS04170 PF02463 RecF/RecN/SMC N terminal domain TQ38_RS04185 PF07690 Major Facilitator Superfamily TQ38_RS04205 PF00462 Glutaredoxin TQ38_RS04225 PF00694 Aconitase C-terminal domain TQ38_RS04235 PF00330 Aconitase family (aconitate hydratase) TQ38_RS04250 PF04116 Fatty acid hydroxylase superfamily TQ38_RS04255 PF04304 Protein of unknown function (DUF454) TQ38_RS04260 PF02657 Fe-S metabolism associated domain TQ38_RS04265 PF02540 NAD synthase TQ38_RS04265 PF00795 Carbon-nitrogen hydrolase TQ38_RS04290 PF04012 PspA/IM30 family TQ38_RS04300 PF00158 Sigma-54 interaction domain TQ38_RS04300 PF02954 Bacterial regulatory protein, Fis family TQ38_RS04310 PF17384 RimP C-terminal SH3 domain TQ38_RS04310 PF02576 RimP N-terminal domain TQ38_RS04315 PF13184 NusA-like KH domain TQ38_RS04315 PF08529 NusA N-terminal domain TQ38_RS04315 PF00575 S1 RNA binding domain TQ38_RS04325 PF08364 Bacterial translation initiation factor IF-2 associated region TQ38_RS04325 PF04760 Translation initiation factor IF-2, N-terminal region TQ38_RS04325 PF00009 Elongation factor Tu GTP binding domain TQ38_RS04325 PF11987 Translation-initiation factor 2 TQ38_RS04340 PF02033 Ribosome-binding factor A TQ38_RS04350 PF00265 Thymidine kinase TQ38_RS04360 PF16198 tRNA pseudouridylate synthase B C-terminal domain TQ38_RS04360 PF01509 TruB family pseudouridylate synthase (N terminal domain) TQ38_RS04365 PF00312 Ribosomal protein S15 TQ38_RS04370 PF00013 KH domain TQ38_RS04370 PF00575 S1 RNA binding domain TQ38_RS04370 PF03725 3' exoribonuclease family, domain 2 TQ38_RS04370 PF01138 3' exoribonuclease family, domain 1 TQ38_RS04370 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TQ38_RS04380 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TQ38_RS04390 PF01061 ABC-2 type transporter TQ38_RS04395 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS04395 PF13188 PAS domain TQ38_RS04395 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS04395 PF00563 EAL domain TQ38_RS04410 PF00589 Phage integrase family TQ38_RS04410 PF13356 Arm DNA-binding domain TQ38_RS04415 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS04415 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS04415 PF00563 EAL domain TQ38_RS04415 PF13188 PAS domain TQ38_RS04420 PF03781 Sulfatase-modifying factor enzyme 1 TQ38_RS04425 PF00884 Sulfatase TQ38_RS04430 PF16347 Domain of unknown function (DUF4976) TQ38_RS04430 PF00884 Sulfatase TQ38_RS04435 PF00884 Sulfatase TQ38_RS04440 PF16385 Domain of unknown function TQ38_RS04440 PF00884 Sulfatase TQ38_RS04445 PF00884 Sulfatase TQ38_RS04455 PF00593 TonB dependent receptor TQ38_RS04455 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS04460 PF00933 Glycosyl hydrolase family 3 N terminal domain TQ38_RS04460 PF14310 Fibronectin type III-like domain TQ38_RS04460 PF01915 Glycosyl hydrolase family 3 C-terminal domain TQ38_RS04465 PF07690 Major Facilitator Superfamily TQ38_RS04470 PF16385 Domain of unknown function TQ38_RS04470 PF00884 Sulfatase TQ38_RS04485 PF03743 Bacterial conjugation TrbI-like protein TQ38_RS04500 PF04610 TrbL/VirB6 plasmid conjugal transfer protein TQ38_RS04510 PF03135 CagE, TrbE, VirB family, component of type IV transporter system TQ38_RS04525 PF00437 Type II/IV secretion system protein TQ38_RS04535 PF02534 Type IV secretory system Conjugative DNA transfer TQ38_RS04560 PF00664 ABC transporter transmembrane region TQ38_RS04560 PF00005 ABC transporter TQ38_RS04560 PF03412 Peptidase C39 family TQ38_RS04565 PF13533 Biotin-lipoyl like TQ38_RS04570 PF06594 Haemolysin-type calcium binding protein related domain TQ38_RS04570 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) TQ38_RS04605 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS04605 PF00593 TonB dependent receptor TQ38_RS04610 PF00326 Prolyl oligopeptidase family TQ38_RS04680 PF05284 Protein of unknown function (DUF736) TQ38_RS04695 PF10145 Phage-related minor tail protein TQ38_RS04695 PF01464 Transglycosylase SLT domain TQ38_RS04695 PF01551 Peptidase family M23 TQ38_RS04710 PF00145 C-5 cytosine-specific DNA methylase TQ38_RS04710 PF18284 DNA methylase N-terminal domain TQ38_RS04715 PF03852 DNA mismatch endonuclease Vsr TQ38_RS04725 PF00145 C-5 cytosine-specific DNA methylase TQ38_RS04740 PF00962 Adenosine/AMP deaminase TQ38_RS04745 PF01725 Ham1 family TQ38_RS04765 PF00589 Phage integrase family TQ38_RS04765 PF13495 Phage integrase, N-terminal SAM-like domain TQ38_RS04770 PF14319 Transposase zinc-binding domain TQ38_RS04770 PF04986 Putative transposase TQ38_RS04810 PF13356 Arm DNA-binding domain TQ38_RS04810 PF00589 Phage integrase family TQ38_RS04815 PF12728 Helix-turn-helix domain TQ38_RS04820 PF05443 ROS/MUCR transcriptional regulator protein TQ38_RS04825 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS04835 PF07690 Major Facilitator Superfamily TQ38_RS04850 PF01494 FAD binding domain TQ38_RS04855 PF00561 alpha/beta hydrolase fold TQ38_RS04860 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS04865 PF00872 Transposase, Mutator family TQ38_RS04895 PF00484 Carbonic anhydrase TQ38_RS04905 PF00593 TonB dependent receptor TQ38_RS04905 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS04925 PF01799 [2Fe-2S] binding domain TQ38_RS04925 PF00111 2Fe-2S iron-sulfur cluster binding domain TQ38_RS04930 PF03450 CO dehydrogenase flavoprotein C-terminal domain TQ38_RS04930 PF00941 FAD binding domain in molybdopterin dehydrogenase TQ38_RS04935 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TQ38_RS04935 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TQ38_RS04950 PF07690 Major Facilitator Superfamily TQ38_RS04955 PF00248 Aldo/keto reductase family TQ38_RS04960 PF00248 Aldo/keto reductase family TQ38_RS04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS04965 PF03466 LysR substrate binding domain TQ38_RS04975 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS04975 PF00593 TonB dependent receptor TQ38_RS04985 PF00171 Aldehyde dehydrogenase family TQ38_RS05000 PF00107 Zinc-binding dehydrogenase TQ38_RS05000 PF16884 N-terminal domain of oxidoreductase TQ38_RS05005 PF13350 Tyrosine phosphatase family TQ38_RS05010 PF00067 Cytochrome P450 TQ38_RS05035 PF01738 Dienelactone hydrolase family TQ38_RS05040 PF02515 CoA-transferase family III TQ38_RS05045 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS05045 PF00501 AMP-binding enzyme TQ38_RS05050 PF07690 Major Facilitator Superfamily TQ38_RS05065 PF00920 Dehydratase family TQ38_RS05070 PF00703 Glycosyl hydrolases family 2 TQ38_RS05070 PF02929 Beta galactosidase small chain TQ38_RS05070 PF02837 Glycosyl hydrolases family 2, sugar binding domain TQ38_RS05070 PF16353 Domain of unknown function(DUF4981) TQ38_RS05070 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TQ38_RS05075 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TQ38_RS05075 PF16355 Domain of unknown function (DUF4982) TQ38_RS05075 PF02837 Glycosyl hydrolases family 2, sugar binding domain TQ38_RS05075 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 TQ38_RS05075 PF00703 Glycosyl hydrolases family 2 TQ38_RS05085 PF07745 Glycosyl hydrolase family 53 TQ38_RS05090 PF00484 Carbonic anhydrase TQ38_RS05105 PF00664 ABC transporter transmembrane region TQ38_RS05105 PF00005 ABC transporter TQ38_RS05105 PF03412 Peptidase C39 family TQ38_RS05135 PF10503 Esterase PHB depolymerase TQ38_RS05140 PF13454 FAD-NAD(P)-binding TQ38_RS05170 PF18011 C-terminal domain found in long catalases TQ38_RS05170 PF06628 Catalase-related immune-responsive TQ38_RS05170 PF00199 Catalase TQ38_RS05200 PF00115 Cytochrome C and Quinol oxidase polypeptide I TQ38_RS05205 PF02790 Cytochrome C oxidase subunit II, transmembrane domain TQ38_RS05205 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TQ38_RS05205 PF00034 Cytochrome c TQ38_RS05215 PF00072 Response regulator receiver domain TQ38_RS05220 PF07568 Histidine kinase TQ38_RS05220 PF13426 PAS domain TQ38_RS05220 PF13581 Histidine kinase-like ATPase domain TQ38_RS05225 PF06018 CodY GAF-like domain TQ38_RS05225 PF08222 CodY helix-turn-helix domain TQ38_RS05235 PF12697 Alpha/beta hydrolase family TQ38_RS05240 PF00171 Aldehyde dehydrogenase family TQ38_RS05245 PF01613 Flavin reductase like domain TQ38_RS05250 PF00171 Aldehyde dehydrogenase family TQ38_RS05255 PF02627 Carboxymuconolactone decarboxylase family TQ38_RS05265 PF00296 Luciferase-like monooxygenase TQ38_RS05270 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin TQ38_RS05275 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TQ38_RS05275 PF00925 GTP cyclohydrolase II TQ38_RS05310 PF03466 LysR substrate binding domain TQ38_RS05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS05315 PF08007 Cupin superfamily protein TQ38_RS05325 PF00171 Aldehyde dehydrogenase family TQ38_RS05330 PF06965 Na+/H+ antiporter 1 TQ38_RS05365 PF00390 Malic enzyme, N-terminal domain TQ38_RS05365 PF03949 Malic enzyme, NAD binding domain TQ38_RS05365 PF01515 Phosphate acetyl/butaryl transferase TQ38_RS05370 PF00012 Hsp70 protein TQ38_RS05375 PF00593 TonB dependent receptor TQ38_RS05375 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS05385 PF01042 Endoribonuclease L-PSP TQ38_RS05390 PF01266 FAD dependent oxidoreductase TQ38_RS05395 PF00842 Alanine racemase, C-terminal domain TQ38_RS05395 PF01168 Alanine racemase, N-terminal domain TQ38_RS05400 PF01037 Lrp/AsnC ligand binding domain TQ38_RS05405 PF00672 HAMP domain TQ38_RS05405 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS05405 PF01627 Hpt domain TQ38_RS05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS05405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TQ38_RS05405 PF00072 Response regulator receiver domain TQ38_RS05410 PF01739 CheR methyltransferase, SAM binding domain TQ38_RS05410 PF03705 CheR methyltransferase, all-alpha domain TQ38_RS05415 PF01339 CheB methylesterase TQ38_RS05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS05420 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS05430 PF13439 Glycosyltransferase Family 4 TQ38_RS05430 PF00534 Glycosyl transferases group 1 TQ38_RS05445 PF01070 FMN-dependent dehydrogenase TQ38_RS05450 PF13640 2OG-Fe(II) oxygenase superfamily TQ38_RS05450 PF18331 PKHD-type hydroxylase C-terminal domain TQ38_RS05455 PF02424 ApbE family TQ38_RS05475 PF03544 Gram-negative bacterial TonB protein C-terminal TQ38_RS05485 PF13426 PAS domain TQ38_RS05485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS05485 PF00072 Response regulator receiver domain TQ38_RS05490 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS05490 PF00072 Response regulator receiver domain TQ38_RS05495 PF03781 Sulfatase-modifying factor enzyme 1 TQ38_RS05500 PF08443 RimK-like ATP-grasp domain TQ38_RS05500 PF18030 RimK PreATP-grasp domain TQ38_RS05515 PF00677 Lumazine binding domain TQ38_RS05520 PF01872 RibD C-terminal domain TQ38_RS05520 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TQ38_RS05535 PF03692 Putative zinc- or iron-chelating domain TQ38_RS05540 PF02630 SCO1/SenC TQ38_RS05560 PF07670 Nucleoside recognition TQ38_RS05560 PF07664 Ferrous iron transport protein B C terminus TQ38_RS05560 PF02421 Ferrous iron transport protein B TQ38_RS05565 PF00436 Single-strand binding protein family TQ38_RS05590 PF00227 Proteasome subunit TQ38_RS05595 PF10431 C-terminal, D2-small domain, of ClpB protein TQ38_RS05595 PF07724 AAA domain (Cdc48 subfamily) TQ38_RS05595 PF00004 ATPase family associated with various cellular activities (AAA) TQ38_RS05625 PF00664 ABC transporter transmembrane region TQ38_RS05625 PF00005 ABC transporter TQ38_RS05645 PF00535 Glycosyl transferase family 2 TQ38_RS05685 PF00107 Zinc-binding dehydrogenase TQ38_RS05685 PF16884 N-terminal domain of oxidoreductase TQ38_RS05700 PF01431 Peptidase family M13 TQ38_RS05700 PF05649 Peptidase family M13 TQ38_RS05710 PF00107 Zinc-binding dehydrogenase TQ38_RS05710 PF16884 N-terminal domain of oxidoreductase TQ38_RS05720 PF00313 'Cold-shock' DNA-binding domain TQ38_RS05735 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS05735 PF00593 TonB dependent receptor TQ38_RS05740 PF16884 N-terminal domain of oxidoreductase TQ38_RS05740 PF00107 Zinc-binding dehydrogenase TQ38_RS05755 PF00106 short chain dehydrogenase TQ38_RS05760 PF00501 AMP-binding enzyme TQ38_RS05760 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS05765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TQ38_RS05765 PF00355 Rieske [2Fe-2S] domain TQ38_RS05800 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TQ38_RS05800 PF00355 Rieske [2Fe-2S] domain TQ38_RS05810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS05810 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS05810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS05815 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS05815 PF03472 Autoinducer binding domain TQ38_RS05825 PF05199 GMC oxidoreductase TQ38_RS05825 PF00732 GMC oxidoreductase TQ38_RS05835 PF02803 Thiolase, C-terminal domain TQ38_RS05835 PF00108 Thiolase, N-terminal domain TQ38_RS05840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS05840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS05840 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS05845 PF00676 Dehydrogenase E1 component TQ38_RS05850 PF02779 Transketolase, pyrimidine binding domain TQ38_RS05850 PF02780 Transketolase, C-terminal domain TQ38_RS05855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TQ38_RS05855 PF02817 e3 binding domain TQ38_RS05855 PF00364 Biotin-requiring enzyme TQ38_RS05865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS05865 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS05865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS05875 PF01192 RNA polymerase Rpb6 TQ38_RS05880 PF13614 AAA domain TQ38_RS05885 PF17862 AAA+ lid domain TQ38_RS05885 PF01434 Peptidase family M41 TQ38_RS05885 PF00004 ATPase family associated with various cellular activities (AAA) TQ38_RS05890 PF13581 Histidine kinase-like ATPase domain TQ38_RS05895 PF00155 Aminotransferase class I and II TQ38_RS05905 PF00893 Small Multidrug Resistance protein TQ38_RS05910 PF00772 DnaB-like helicase N terminal domain TQ38_RS05910 PF03796 DnaB-like helicase C terminal domain TQ38_RS05915 PF06793 Uncharacterised protein family (UPF0262) TQ38_RS05925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TQ38_RS05935 PF00246 Zinc carboxypeptidase TQ38_RS05935 PF18027 Cytosolic carboxypeptidase N-terminal domain TQ38_RS05950 PF00444 Ribosomal protein L36 TQ38_RS05960 PF14403 Circularly permuted ATP-grasp type 2 TQ38_RS05985 PF10677 Protein of unknown function (DUF2490) TQ38_RS06000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TQ38_RS06000 PF01842 ACT domain TQ38_RS06000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TQ38_RS06015 PF01050 Mannose-6-phosphate isomerase TQ38_RS06015 PF00483 Nucleotidyl transferase TQ38_RS06020 PF01238 Phosphomannose isomerase type I TQ38_RS06035 PF00501 AMP-binding enzyme TQ38_RS06065 PF03588 Leucyl/phenylalanyl-tRNA protein transferase TQ38_RS06085 PF02357 Transcription termination factor nusG TQ38_RS06085 PF00467 KOW motif TQ38_RS06090 PF00583 Acetyltransferase (GNAT) family TQ38_RS06100 PF00298 Ribosomal protein L11, RNA binding domain TQ38_RS06100 PF03946 Ribosomal protein L11, N-terminal domain TQ38_RS06105 PF00687 Ribosomal protein L1p/L10e family TQ38_RS06120 PF02464 Competence-damaged protein TQ38_RS06120 PF18146 Damage-inducible protein CinA KH domain TQ38_RS06120 PF00994 Probable molybdopterin binding domain TQ38_RS06125 PF00919 Uncharacterized protein family UPF0004 TQ38_RS06125 PF04055 Radical SAM superfamily TQ38_RS06125 PF18693 TRAM domain TQ38_RS06140 PF01551 Peptidase family M23 TQ38_RS06140 PF01476 LysM domain TQ38_RS06145 PF01975 Survival protein SurE TQ38_RS06150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TQ38_RS06150 PF02403 Seryl-tRNA synthetase N-terminal domain TQ38_RS06170 PF01926 50S ribosome-binding GTPase TQ38_RS06170 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TQ38_RS06175 PF01594 AI-2E family transporter TQ38_RS06180 PF00210 Ferritin-like domain TQ38_RS06190 PF04235 Protein of unknown function (DUF418) TQ38_RS06200 PF13614 AAA domain TQ38_RS06210 PF01979 Amidohydrolase family TQ38_RS06215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TQ38_RS06215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TQ38_RS06220 PF01343 Peptidase family S49 TQ38_RS06230 PF05698 Bacterial trigger factor protein (TF) C-terminus TQ38_RS06230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TQ38_RS06230 PF05697 Bacterial trigger factor protein (TF) TQ38_RS06235 PF07298 NnrU protein TQ38_RS06240 PF01425 Amidase TQ38_RS06245 PF00574 Clp protease TQ38_RS06250 PF07724 AAA domain (Cdc48 subfamily) TQ38_RS06250 PF06689 ClpX C4-type zinc finger TQ38_RS06250 PF10431 C-terminal, D2-small domain, of ClpB protein TQ38_RS06260 PF01545 Cation efflux family TQ38_RS06270 PF00912 Transglycosylase TQ38_RS06275 PF04542 Sigma-70 region 2 TQ38_RS06275 PF00140 Sigma-70 factor, region 1.2 TQ38_RS06275 PF04545 Sigma-70, region 4 TQ38_RS06280 PF00849 RNA pseudouridylate synthase TQ38_RS06290 PF10090 Histidine phosphotransferase C-terminal domain TQ38_RS06295 PF01510 N-acetylmuramoyl-L-alanine amidase TQ38_RS06305 PF00149 Calcineurin-like phosphoesterase TQ38_RS06320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TQ38_RS06325 PF13632 Glycosyl transferase family group 2 TQ38_RS06325 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TQ38_RS06335 PF01925 Sulfite exporter TauE/SafE TQ38_RS06350 PF01554 MatE TQ38_RS06360 PF00133 tRNA synthetases class I (I, L, M and V) TQ38_RS06360 PF10458 Valyl tRNA synthetase tRNA binding arm TQ38_RS06360 PF08264 Anticodon-binding domain of tRNA TQ38_RS06365 PF02405 Permease MlaE TQ38_RS06370 PF00005 ABC transporter TQ38_RS06400 PF13419 Haloacid dehalogenase-like hydrolase TQ38_RS06405 PF01479 S4 domain TQ38_RS06405 PF00849 RNA pseudouridylate synthase TQ38_RS06410 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TQ38_RS06415 PF01165 Ribosomal protein S21 TQ38_RS06425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TQ38_RS06425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TQ38_RS06430 PF02686 Glu-tRNAGln amidotransferase C subunit TQ38_RS06435 PF01425 Amidase TQ38_RS06440 PF02934 GatB/GatE catalytic domain TQ38_RS06440 PF02637 GatB domain TQ38_RS06460 PF17871 AAA lid domain TQ38_RS06460 PF02861 Clp amino terminal domain, pathogenicity island component TQ38_RS06460 PF10431 C-terminal, D2-small domain, of ClpB protein TQ38_RS06460 PF00004 ATPase family associated with various cellular activities (AAA) TQ38_RS06460 PF07724 AAA domain (Cdc48 subfamily) TQ38_RS06470 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS06470 PF00593 TonB dependent receptor TQ38_RS06475 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS06475 PF00593 TonB dependent receptor TQ38_RS06480 PF00106 short chain dehydrogenase TQ38_RS06515 PF13629 Pilus formation protein N terminal region TQ38_RS06515 PF00263 Bacterial type II and III secretion system protein TQ38_RS06515 PF04972 BON domain TQ38_RS06535 PF01266 FAD dependent oxidoreductase TQ38_RS06540 PF07411 Domain of unknown function (DUF1508) TQ38_RS06550 PF00075 RNase H TQ38_RS06555 PF01636 Phosphotransferase enzyme family TQ38_RS06560 PF02401 LytB protein TQ38_RS06575 PF01475 Ferric uptake regulator family TQ38_RS06580 PF05443 ROS/MUCR transcriptional regulator protein TQ38_RS06585 PF00814 Glycoprotease family TQ38_RS06585 PF00583 Acetyltransferase (GNAT) family TQ38_RS06590 PF00814 Glycoprotease family TQ38_RS06595 PF01106 NifU-like domain TQ38_RS06600 PF05193 Peptidase M16 inactive domain TQ38_RS06600 PF00675 Insulinase (Peptidase family M16) TQ38_RS06605 PF01474 Class-II DAHP synthetase family TQ38_RS06610 PF04279 Intracellular septation protein A TQ38_RS06615 PF00448 SRP54-type protein, GTPase domain TQ38_RS06615 PF02881 SRP54-type protein, helical bundle domain TQ38_RS06620 PF04055 Radical SAM superfamily TQ38_RS06620 PF00919 Uncharacterized protein family UPF0004 TQ38_RS06625 PF01678 Diaminopimelate epimerase TQ38_RS06660 PF01066 CDP-alcohol phosphatidyltransferase TQ38_RS06665 PF07690 Major Facilitator Superfamily TQ38_RS06670 PF03466 LysR substrate binding domain TQ38_RS06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS06685 PF02938 GAD domain TQ38_RS06685 PF00152 tRNA synthetases class II (D, K and N) TQ38_RS06685 PF01336 OB-fold nucleic acid binding domain TQ38_RS06695 PF00550 Phosphopantetheine attachment site TQ38_RS06700 PF00109 Beta-ketoacyl synthase, N-terminal domain TQ38_RS06700 PF02801 Beta-ketoacyl synthase, C-terminal domain TQ38_RS06705 PF02618 YceG-like family TQ38_RS06735 PF12795 Mechanosensitive ion channel porin domain TQ38_RS06735 PF12794 Mechanosensitive ion channel inner membrane domain 1 TQ38_RS06735 PF00924 Mechanosensitive ion channel TQ38_RS06740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TQ38_RS06740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TQ38_RS06750 PF04393 Protein of unknown function (DUF535) TQ38_RS06760 PF00155 Aminotransferase class I and II TQ38_RS06760 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS06785 PF00480 ROK family TQ38_RS06790 PF00581 Rhodanese-like domain TQ38_RS06790 PF17773 UPF0176 acylphosphatase like domain TQ38_RS06805 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS06815 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS06815 PF00593 TonB dependent receptor TQ38_RS06820 PF00175 Oxidoreductase NAD-binding domain TQ38_RS06820 PF00667 FAD binding domain TQ38_RS06820 PF00258 Flavodoxin TQ38_RS06830 PF02515 CoA-transferase family III TQ38_RS06840 PF13426 PAS domain TQ38_RS06840 PF08448 PAS fold TQ38_RS06840 PF08447 PAS fold TQ38_RS06840 PF05231 MASE1 TQ38_RS06840 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS06840 PF00563 EAL domain TQ38_RS06845 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS06865 PF00561 alpha/beta hydrolase fold TQ38_RS06865 PF00364 Biotin-requiring enzyme TQ38_RS06875 PF01613 Flavin reductase like domain TQ38_RS06880 PF00171 Aldehyde dehydrogenase family TQ38_RS06890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS06890 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS06890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS06895 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS06900 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS06905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TQ38_RS06905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TQ38_RS06915 PF00293 NUDIX domain TQ38_RS06925 PF04536 TPM domain TQ38_RS06935 PF01741 Large-conductance mechanosensitive channel, MscL TQ38_RS06950 PF01274 Malate synthase TQ38_RS06960 PF01638 HxlR-like helix-turn-helix TQ38_RS06965 PF00106 short chain dehydrogenase TQ38_RS06985 PF13577 SnoaL-like domain TQ38_RS07015 PF13439 Glycosyltransferase Family 4 TQ38_RS07015 PF00534 Glycosyl transferases group 1 TQ38_RS07025 PF16326 ABC transporter C-terminal domain TQ38_RS07025 PF00005 ABC transporter TQ38_RS07035 PF00072 Response regulator receiver domain TQ38_RS07035 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS07040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS07050 PF01817 Chorismate mutase type II TQ38_RS07050 PF02153 Prephenate dehydrogenase TQ38_RS07055 PF00348 Polyprenyl synthetase TQ38_RS07065 PF13188 PAS domain TQ38_RS07065 PF00563 EAL domain TQ38_RS07065 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS07065 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS07070 PF00271 Helicase conserved C-terminal domain TQ38_RS07070 PF04408 Helicase associated domain (HA2) TQ38_RS07070 PF00270 DEAD/DEAH box helicase TQ38_RS07070 PF08482 ATP-dependent helicase C-terminal TQ38_RS07085 PF12169 DNA polymerase III subunits gamma and tau domain III TQ38_RS07085 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding TQ38_RS07085 PF12170 DNA polymerase III tau subunit V interacting with alpha TQ38_RS07090 PF02575 YbaB/EbfC DNA-binding family TQ38_RS07095 PF02190 ATP-dependent protease La (LON) substrate-binding domain TQ38_RS07095 PF00004 ATPase family associated with various cellular activities (AAA) TQ38_RS07095 PF05362 Lon protease (S16) C-terminal proteolytic domain TQ38_RS07100 PF04235 Protein of unknown function (DUF418) TQ38_RS07105 PF01118 Semialdehyde dehydrogenase, NAD binding domain TQ38_RS07105 PF02774 Semialdehyde dehydrogenase, dimerisation domain TQ38_RS07135 PF01048 Phosphorylase superfamily TQ38_RS07135 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus TQ38_RS07140 PF03948 Ribosomal protein L9, C-terminal domain TQ38_RS07140 PF01281 Ribosomal protein L9, N-terminal domain TQ38_RS07145 PF01084 Ribosomal protein S18 TQ38_RS07150 PF01250 Ribosomal protein S6 TQ38_RS07155 PF01433 Peptidase family M1 domain TQ38_RS07190 PF01037 Lrp/AsnC ligand binding domain TQ38_RS07200 PF01220 Dehydroquinase class II TQ38_RS07225 PF02699 Preprotein translocase subunit TQ38_RS07230 PF07549 SecD/SecF GG Motif TQ38_RS07230 PF02355 Protein export membrane protein TQ38_RS07235 PF07549 SecD/SecF GG Motif TQ38_RS07235 PF02355 Protein export membrane protein TQ38_RS07240 PF00398 Ribosomal RNA adenine dimethylase TQ38_RS07245 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TQ38_RS07250 PF00639 PPIC-type PPIASE domain TQ38_RS07250 PF09312 SurA N-terminal domain TQ38_RS07255 PF04453 LPS transport system D TQ38_RS07260 PF02789 Cytosol aminopeptidase family, N-terminal domain TQ38_RS07260 PF00883 Cytosol aminopeptidase family, catalytic domain TQ38_RS07270 PF00334 Nucleoside diphosphate kinase TQ38_RS07280 PF00551 Formyl transferase TQ38_RS07285 PF02769 AIR synthase related protein, C-terminal domain TQ38_RS07285 PF00586 AIR synthase related protein, N-terminal domain TQ38_RS07300 PF06426 Serine acetyltransferase, N-terminal TQ38_RS07300 PF00132 Bacterial transferase hexapeptide (six repeats) TQ38_RS07315 PF00106 short chain dehydrogenase TQ38_RS07320 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase TQ38_RS07330 PF00854 POT family TQ38_RS07340 PF01761 3-dehydroquinate synthase TQ38_RS07345 PF01202 Shikimate kinase TQ38_RS07355 PF02899 Phage integrase, N-terminal SAM-like domain TQ38_RS07355 PF00589 Phage integrase family TQ38_RS07375 PF00293 NUDIX domain TQ38_RS07390 PF00654 Voltage gated chloride channel TQ38_RS07400 PF13091 PLD-like domain TQ38_RS07400 PF13396 Phospholipase_D-nuclease N-terminal TQ38_RS07405 PF01227 GTP cyclohydrolase I TQ38_RS07420 PF00106 short chain dehydrogenase TQ38_RS07425 PF08534 Redoxin TQ38_RS07435 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TQ38_RS07435 PF05221 S-adenosyl-L-homocysteine hydrolase TQ38_RS07455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS07455 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS07460 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TQ38_RS07465 PF01636 Phosphotransferase enzyme family TQ38_RS07470 PF12804 MobA-like NTP transferase domain TQ38_RS07480 PF00580 UvrD/REP helicase N-terminal domain TQ38_RS07480 PF13361 UvrD-like helicase C-terminal domain TQ38_RS07480 PF12705 PD-(D/E)XK nuclease superfamily TQ38_RS07485 PF00085 Thioredoxin TQ38_RS07490 PF00459 Inositol monophosphatase family TQ38_RS07495 PF00043 Glutathione S-transferase, C-terminal domain TQ38_RS07495 PF13417 Glutathione S-transferase, N-terminal domain TQ38_RS07500 PF01960 ArgJ family TQ38_RS07515 PF07516 SecA Wing and Scaffold domain TQ38_RS07515 PF01043 SecA preprotein cross-linking domain TQ38_RS07515 PF02810 SEC-C motif TQ38_RS07515 PF07517 SecA DEAD-like domain TQ38_RS07530 PF01494 FAD binding domain TQ38_RS07540 PF04199 Putative cyclase TQ38_RS07555 PF00691 OmpA family TQ38_RS07555 PF00223 Photosystem I psaA/psaB protein TQ38_RS07565 PF01966 HD domain TQ38_RS07565 PF13286 Phosphohydrolase-associated domain TQ38_RS07570 PF01432 Peptidase family M3 TQ38_RS07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS07580 PF03466 LysR substrate binding domain TQ38_RS07590 PF01513 ATP-NAD kinase TQ38_RS07595 PF00563 EAL domain TQ38_RS07595 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS07595 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS07600 PF17757 UvrB interaction domain TQ38_RS07600 PF00271 Helicase conserved C-terminal domain TQ38_RS07600 PF00270 DEAD/DEAH box helicase TQ38_RS07600 PF02559 CarD-like/TRCF domain TQ38_RS07600 PF03461 TRCF domain TQ38_RS07610 PF03937 Flavinator of succinate dehydrogenase TQ38_RS07620 PF00271 Helicase conserved C-terminal domain TQ38_RS07620 PF17191 RecG wedge domain TQ38_RS07620 PF00270 DEAD/DEAH box helicase TQ38_RS07630 PF00303 Thymidylate synthase TQ38_RS07635 PF00676 Dehydrogenase E1 component TQ38_RS07635 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal TQ38_RS07640 PF02780 Transketolase, C-terminal domain TQ38_RS07640 PF02779 Transketolase, pyrimidine binding domain TQ38_RS07645 PF02817 e3 binding domain TQ38_RS07645 PF00364 Biotin-requiring enzyme TQ38_RS07645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TQ38_RS07685 PF00456 Transketolase, thiamine diphosphate binding domain TQ38_RS07685 PF02779 Transketolase, pyrimidine binding domain TQ38_RS07685 PF02780 Transketolase, C-terminal domain TQ38_RS07690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TQ38_RS07690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TQ38_RS07695 PF00162 Phosphoglycerate kinase TQ38_RS07705 PF00274 Fructose-bisphosphate aldolase class-I TQ38_RS07715 PF02581 Thiamine monophosphate synthase TQ38_RS07730 PF01983 Guanylyl transferase CofC like TQ38_RS07740 PF01996 F420-0:Gamma-glutamyl ligase TQ38_RS07740 PF00881 Nitroreductase family TQ38_RS07745 PF01933 Uncharacterised protein family UPF0052 TQ38_RS07750 PF04055 Radical SAM superfamily TQ38_RS07760 PF13181 Tetratricopeptide repeat TQ38_RS07765 PF12833 Helix-turn-helix domain TQ38_RS07775 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS07775 PF00107 Zinc-binding dehydrogenase TQ38_RS07810 PF08207 Elongation factor P (EF-P) KOW-like domain TQ38_RS07810 PF09285 Elongation factor P, C-terminal TQ38_RS07810 PF01132 Elongation factor P (EF-P) OB domain TQ38_RS07820 PF00459 Inositol monophosphatase family TQ38_RS07840 PF02540 NAD synthase TQ38_RS07840 PF00117 Glutamine amidotransferase class-I TQ38_RS07840 PF00958 GMP synthase C terminal domain TQ38_RS07845 PF07687 Peptidase dimerisation domain TQ38_RS07845 PF01546 Peptidase family M20/M25/M40 TQ38_RS07850 PF02397 Bacterial sugar transferase TQ38_RS07855 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS07855 PF02743 Cache domain TQ38_RS07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS07860 PF02954 Bacterial regulatory protein, Fis family TQ38_RS07860 PF00158 Sigma-54 interaction domain TQ38_RS07860 PF00072 Response regulator receiver domain TQ38_RS07870 PF02548 Ketopantoate hydroxymethyltransferase TQ38_RS07875 PF13520 Amino acid permease TQ38_RS07900 PF01368 DHH family TQ38_RS07900 PF02272 DHHA1 domain TQ38_RS07900 PF17768 RecJ OB domain TQ38_RS07935 PF08502 LeuA allosteric (dimerisation) domain TQ38_RS07935 PF00682 HMGL-like TQ38_RS07950 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TQ38_RS07955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TQ38_RS07955 PF02874 ATP synthase alpha/beta family, beta-barrel domain TQ38_RS07960 PF00231 ATP synthase TQ38_RS07965 PF00306 ATP synthase alpha/beta chain, C terminal domain TQ38_RS07965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TQ38_RS07965 PF02874 ATP synthase alpha/beta family, beta-barrel domain TQ38_RS07970 PF00213 ATP synthase delta (OSCP) subunit TQ38_RS07980 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TQ38_RS07980 PF12833 Helix-turn-helix domain TQ38_RS07980 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TQ38_RS07980 PF02805 Metal binding domain of Ada TQ38_RS07990 PF17764 3′ DNA-binding domain (3′BD) TQ38_RS07990 PF18074 Primosomal protein N C-terminal domain TQ38_RS07990 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TQ38_RS07990 PF00270 DEAD/DEAH box helicase TQ38_RS08000 PF00923 Transaldolase/Fructose-6-phosphate aldolase TQ38_RS08005 PF06213 Cobalamin biosynthesis protein CobT TQ38_RS08005 PF11775 Cobalamin biosynthesis protein CobT VWA domain TQ38_RS08010 PF01406 tRNA synthetases class I (C) catalytic domain TQ38_RS08015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TQ38_RS08015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TQ38_RS08015 PF01842 ACT domain TQ38_RS08020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TQ38_RS08020 PF00205 Thiamine pyrophosphate enzyme, central domain TQ38_RS08020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TQ38_RS08040 PF00753 Metallo-beta-lactamase superfamily TQ38_RS08050 PF01783 Ribosomal L32p protein family TQ38_RS08055 PF02504 Fatty acid synthesis protein TQ38_RS08060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TQ38_RS08060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TQ38_RS08065 PF00216 Bacterial DNA-binding protein TQ38_RS08075 PF03193 RsgA GTPase TQ38_RS08085 PF13307 Helicase C-terminal domain TQ38_RS08085 PF04851 Type III restriction enzyme, res subunit TQ38_RS08100 PF01921 tRNA synthetases class I (K) TQ38_RS08125 PF00005 ABC transporter TQ38_RS08125 PF12848 ABC transporter TQ38_RS08140 PF03328 HpcH/HpaI aldolase/citrate lyase family TQ38_RS08145 PF00106 short chain dehydrogenase TQ38_RS08150 PF02780 Transketolase, C-terminal domain TQ38_RS08150 PF02779 Transketolase, pyrimidine binding domain TQ38_RS08150 PF00364 Biotin-requiring enzyme TQ38_RS08155 PF00578 AhpC/TSA family TQ38_RS08160 PF03462 PCRF domain TQ38_RS08160 PF00472 RF-1 domain TQ38_RS08165 PF08241 Methyltransferase domain TQ38_RS08180 PF00909 Ammonium Transporter Family TQ38_RS08185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TQ38_RS08185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TQ38_RS08195 PF00108 Thiolase, N-terminal domain TQ38_RS08195 PF02803 Thiolase, C-terminal domain TQ38_RS08200 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TQ38_RS08205 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TQ38_RS08210 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TQ38_RS08215 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TQ38_RS08235 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TQ38_RS08235 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TQ38_RS08235 PF10531 SLBB domain TQ38_RS08240 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal TQ38_RS08240 PF00384 Molybdopterin oxidoreductase TQ38_RS08240 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TQ38_RS08245 PF00146 NADH dehydrogenase TQ38_RS08250 PF12838 4Fe-4S dicluster domain TQ38_RS08255 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TQ38_RS08260 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TQ38_RS08265 PF00361 Proton-conducting membrane transporter TQ38_RS08265 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TQ38_RS08270 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus TQ38_RS08270 PF00361 Proton-conducting membrane transporter TQ38_RS08275 PF00361 Proton-conducting membrane transporter TQ38_RS08280 PF03099 Biotin/lipoate A/B protein ligase family TQ38_RS08280 PF02237 Biotin protein ligase C terminal domain TQ38_RS08285 PF03309 Type III pantothenate kinase TQ38_RS08290 PF17770 Ribonuclease J C-terminal domain TQ38_RS08290 PF12706 Beta-lactamase superfamily domain TQ38_RS08290 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TQ38_RS08310 PF00872 Transposase, Mutator family TQ38_RS08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS08335 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS08345 PF00285 Citrate synthase, C-terminal domain TQ38_RS08350 PF00749 tRNA synthetases class I (E and Q), catalytic domain TQ38_RS08355 PF03772 Competence protein TQ38_RS08355 PF00753 Metallo-beta-lactamase superfamily TQ38_RS08360 PF00717 Peptidase S24-like TQ38_RS08360 PF01726 LexA DNA binding domain TQ38_RS08365 PF00994 Probable molybdopterin binding domain TQ38_RS08365 PF03453 MoeA N-terminal region (domain I and II) TQ38_RS08365 PF03454 MoeA C-terminal region (domain IV) TQ38_RS08370 PF01967 MoaC family TQ38_RS08375 PF00218 Indole-3-glycerol phosphate synthase TQ38_RS08380 PF00591 Glycosyl transferase family, a/b domain TQ38_RS08380 PF02885 Glycosyl transferase family, helical bundle domain TQ38_RS08385 PF00117 Glutamine amidotransferase class-I TQ38_RS08400 PF00425 chorismate binding enzyme TQ38_RS08400 PF04715 Anthranilate synthase component I, N terminal region TQ38_RS08410 PF00121 Triosephosphate isomerase TQ38_RS08415 PF03840 Preprotein translocase SecG subunit TQ38_RS08420 PF06418 CTP synthase N-terminus TQ38_RS08420 PF00117 Glutamine amidotransferase class-I TQ38_RS08425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TQ38_RS08425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TQ38_RS08430 PF00962 Adenosine/AMP deaminase TQ38_RS08435 PF03547 Membrane transport protein TQ38_RS08440 PF00011 Hsp20/alpha crystallin family TQ38_RS08445 PF00462 Glutaredoxin TQ38_RS08450 PF00795 Carbon-nitrogen hydrolase TQ38_RS08465 PF00270 DEAD/DEAH box helicase TQ38_RS08465 PF00271 Helicase conserved C-terminal domain TQ38_RS08480 PF11412 Disulphide bond corrector protein DsbC TQ38_RS08480 PF02683 Cytochrome C biogenesis protein transmembrane region TQ38_RS08485 PF00578 AhpC/TSA family TQ38_RS08490 PF00106 short chain dehydrogenase TQ38_RS08500 PF01638 HxlR-like helix-turn-helix TQ38_RS08505 PF02129 X-Pro dipeptidyl-peptidase (S15 family) TQ38_RS08510 PF07690 Major Facilitator Superfamily TQ38_RS08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS08515 PF03466 LysR substrate binding domain TQ38_RS08530 PF01227 GTP cyclohydrolase I TQ38_RS08535 PF00291 Pyridoxal-phosphate dependent enzyme TQ38_RS08540 PF13426 PAS domain TQ38_RS08540 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS08545 PF01593 Flavin containing amine oxidoreductase TQ38_RS08555 PF01593 Flavin containing amine oxidoreductase TQ38_RS08560 PF02401 LytB protein TQ38_RS08570 PF07690 Major Facilitator Superfamily TQ38_RS08620 PF00534 Glycosyl transferases group 1 TQ38_RS08620 PF13439 Glycosyltransferase Family 4 TQ38_RS08650 PF13439 Glycosyltransferase Family 4 TQ38_RS08650 PF00534 Glycosyl transferases group 1 TQ38_RS08660 PF01938 TRAM domain TQ38_RS08660 PF05958 tRNA (Uracil-5-)-methyltransferase TQ38_RS08670 PF00106 short chain dehydrogenase TQ38_RS08675 PF00501 AMP-binding enzyme TQ38_RS08675 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS08685 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS08685 PF03472 Autoinducer binding domain TQ38_RS08700 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS08700 PF07729 FCD domain TQ38_RS08710 PF16220 Domain of unknown function (DUF4880) TQ38_RS08710 PF04773 FecR protein TQ38_RS08715 PF00593 TonB dependent receptor TQ38_RS08715 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS08745 PF03743 Bacterial conjugation TrbI-like protein TQ38_RS08755 PF04335 VirB8 protein TQ38_RS08775 PF03135 CagE, TrbE, VirB family, component of type IV transporter system TQ38_RS08790 PF00437 Type II/IV secretion system protein TQ38_RS08855 PF02534 Type IV secretory system Conjugative DNA transfer TQ38_RS08865 PF10145 Phage-related minor tail protein TQ38_RS08865 PF01464 Transglycosylase SLT domain TQ38_RS08865 PF01551 Peptidase family M23 TQ38_RS08910 PF05284 Protein of unknown function (DUF736) TQ38_RS08930 PF02195 ParB-like nuclease domain TQ38_RS08930 PF17762 HTH domain found in ParB protein TQ38_RS08955 PF02322 Cytochrome bd terminal oxidase subunit II TQ38_RS08970 PF04143 Sulphur transport TQ38_RS08975 PF00753 Metallo-beta-lactamase superfamily TQ38_RS08980 PF00689 Cation transporting ATPase, C-terminus TQ38_RS08980 PF00690 Cation transporter/ATPase, N-terminus TQ38_RS08985 PF02525 Flavodoxin-like fold TQ38_RS09000 PF00072 Response regulator receiver domain TQ38_RS09000 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS09005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS09005 PF00072 Response regulator receiver domain TQ38_RS09010 PF00072 Response regulator receiver domain TQ38_RS09010 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS09015 PF00989 PAS fold TQ38_RS09015 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS09020 PF13607 Succinyl-CoA ligase like flavodoxin domain TQ38_RS09020 PF13380 CoA binding domain TQ38_RS09020 PF00583 Acetyltransferase (GNAT) family TQ38_RS09030 PF00690 Cation transporter/ATPase, N-terminus TQ38_RS09030 PF00689 Cation transporting ATPase, C-terminus TQ38_RS09060 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS09060 PF00107 Zinc-binding dehydrogenase TQ38_RS09070 PF00011 Hsp20/alpha crystallin family TQ38_RS09105 PF18073 Rubredoxin metal binding domain TQ38_RS09110 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS09110 PF00072 Response regulator receiver domain TQ38_RS09115 PF13358 DDE superfamily endonuclease TQ38_RS09165 PF02080 TrkA-C domain TQ38_RS09165 PF03600 Citrate transporter TQ38_RS09170 PF06965 Na+/H+ antiporter 1 TQ38_RS09185 PF08281 Sigma-70, region 4 TQ38_RS09185 PF04542 Sigma-70 region 2 TQ38_RS09230 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH TQ38_RS09255 PF03960 ArsC family TQ38_RS09260 PF01758 Sodium Bile acid symporter family TQ38_RS09265 PF03358 NADPH-dependent FMN reductase TQ38_RS09280 PF03050 Transposase IS66 family TQ38_RS09280 PF13007 Transposase C of IS166 homeodomain TQ38_RS09280 PF13005 zinc-finger binding domain of transposase IS66 TQ38_RS09280 PF13817 IS66 C-terminal element TQ38_RS09285 PF05717 IS66 Orf2 like protein TQ38_RS09305 PF00072 Response regulator receiver domain TQ38_RS09305 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS09310 PF00561 alpha/beta hydrolase fold TQ38_RS09315 PF00561 alpha/beta hydrolase fold TQ38_RS09320 PF00072 Response regulator receiver domain TQ38_RS09320 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS09325 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS09325 PF00989 PAS fold TQ38_RS09325 PF08447 PAS fold TQ38_RS09325 PF13426 PAS domain TQ38_RS09325 PF13493 Domain of unknown function (DUF4118) TQ38_RS09325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS09330 PF00593 TonB dependent receptor TQ38_RS09330 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS09340 PF00561 alpha/beta hydrolase fold TQ38_RS09350 PF00561 alpha/beta hydrolase fold TQ38_RS09355 PF00857 Isochorismatase family TQ38_RS09375 PF12728 Helix-turn-helix domain TQ38_RS09380 PF00589 Phage integrase family TQ38_RS09380 PF13356 Arm DNA-binding domain TQ38_RS09390 PF13406 Transglycosylase SLT domain TQ38_RS09395 PF03330 Lytic transglycolase TQ38_RS09395 PF05036 Sporulation related domain TQ38_RS09405 PF02223 Thymidylate kinase TQ38_RS09410 PF09115 DNA polymerase III, delta subunit, C terminal TQ38_RS09415 PF08264 Anticodon-binding domain of tRNA TQ38_RS09415 PF09334 tRNA synthetases class I (M) TQ38_RS09420 PF01026 TatD related DNase TQ38_RS09435 PF03819 MazG nucleotide pyrophosphohydrolase domain TQ38_RS09440 PF13167 GTP-binding GTPase N-terminal TQ38_RS09440 PF01926 50S ribosome-binding GTPase TQ38_RS09440 PF16360 GTP-binding GTPase Middle Region TQ38_RS09445 PF17209 Hfq protein TQ38_RS09450 PF00072 Response regulator receiver domain TQ38_RS09450 PF00158 Sigma-54 interaction domain TQ38_RS09450 PF02954 Bacterial regulatory protein, Fis family TQ38_RS09455 PF00989 PAS fold TQ38_RS09455 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS09455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS09455 PF00672 HAMP domain TQ38_RS09460 PF02954 Bacterial regulatory protein, Fis family TQ38_RS09460 PF00158 Sigma-54 interaction domain TQ38_RS09460 PF00072 Response regulator receiver domain TQ38_RS09465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS09465 PF00989 PAS fold TQ38_RS09465 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS09470 PF01207 Dihydrouridine synthase (Dus) TQ38_RS09475 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TQ38_RS09475 PF02542 YgbB family TQ38_RS09485 PF02464 Competence-damaged protein TQ38_RS09490 PF03364 Polyketide cyclase / dehydrase and lipid transport TQ38_RS09495 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family TQ38_RS09495 PF04055 Radical SAM superfamily TQ38_RS09500 PF00484 Carbonic anhydrase TQ38_RS09510 PF03989 DNA gyrase C-terminal domain, beta-propeller TQ38_RS09510 PF00521 DNA gyrase/topoisomerase IV, subunit A TQ38_RS09525 PF01134 Glucose inhibited division protein A TQ38_RS09540 PF02780 Transketolase, C-terminal domain TQ38_RS09540 PF00364 Biotin-requiring enzyme TQ38_RS09540 PF02779 Transketolase, pyrimidine binding domain TQ38_RS09545 PF00676 Dehydrogenase E1 component TQ38_RS09555 PF00005 ABC transporter TQ38_RS09555 PF12848 ABC transporter TQ38_RS09560 PF03449 Transcription elongation factor, N-terminal TQ38_RS09560 PF01272 Transcription elongation factor, GreA/GreB, C-term TQ38_RS09565 PF00271 Helicase conserved C-terminal domain TQ38_RS09565 PF00270 DEAD/DEAH box helicase TQ38_RS09565 PF03880 DbpA RNA binding domain TQ38_RS09585 PF00535 Glycosyl transferase family 2 TQ38_RS09590 PF16177 Acetyl-coenzyme A synthetase N-terminus TQ38_RS09590 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS09590 PF00501 AMP-binding enzyme TQ38_RS09600 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS09600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TQ38_RS09605 PF03061 Thioesterase superfamily TQ38_RS09615 PF00364 Biotin-requiring enzyme TQ38_RS09615 PF02817 e3 binding domain TQ38_RS09615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TQ38_RS09625 PF17876 Cold shock domain TQ38_RS09625 PF00773 RNB domain TQ38_RS09625 PF08206 Ribonuclease B OB domain TQ38_RS09625 PF00575 S1 RNA binding domain TQ38_RS09625 PF08461 Ribonuclease R winged-helix domain TQ38_RS09635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TQ38_RS09635 PF03129 Anticodon binding domain TQ38_RS09640 PF00293 NUDIX domain TQ38_RS09645 PF05233 PHB accumulation regulatory domain TQ38_RS09645 PF07879 PHB/PHA accumulation regulator DNA-binding domain TQ38_RS09660 PF18073 Rubredoxin metal binding domain TQ38_RS09660 PF06745 KaiC TQ38_RS09665 PF11856 Protein of unknown function (DUF3376) TQ38_RS09665 PF01734 Patatin-like phospholipase TQ38_RS09670 PF00684 DnaJ central domain TQ38_RS09670 PF00226 DnaJ domain TQ38_RS09670 PF01556 DnaJ C terminal domain TQ38_RS09675 PF00012 Hsp70 protein TQ38_RS09685 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) TQ38_RS09685 PF13296 Putative type VI secretion system Rhs element Vgr TQ38_RS09685 PF04717 Type VI secretion system, phage-baseplate injector TQ38_RS09695 PF01025 GrpE TQ38_RS09700 PF01628 HrcA protein C terminal domain TQ38_RS09705 PF03725 3' exoribonuclease family, domain 2 TQ38_RS09705 PF01138 3' exoribonuclease family, domain 1 TQ38_RS09710 PF01725 Ham1 family TQ38_RS09715 PF06969 HemN C-terminal domain TQ38_RS09715 PF04055 Radical SAM superfamily TQ38_RS09720 PF02899 Phage integrase, N-terminal SAM-like domain TQ38_RS09720 PF00589 Phage integrase family TQ38_RS09725 PF09335 SNARE associated Golgi protein TQ38_RS09730 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain TQ38_RS09730 PF02951 Prokaryotic glutathione synthetase, N-terminal domain TQ38_RS09735 PF02021 Uncharacterised protein family UPF0102 TQ38_RS09740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TQ38_RS09750 PF00204 DNA gyrase B TQ38_RS09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS09750 PF01751 Toprim domain TQ38_RS09750 PF00986 DNA gyrase B subunit, carboxyl terminus TQ38_RS09765 PF00004 ATPase family associated with various cellular activities (AAA) TQ38_RS09765 PF17862 AAA+ lid domain TQ38_RS09765 PF01434 Peptidase family M41 TQ38_RS09775 PF05675 Protein of unknown function (DUF817) TQ38_RS09790 PF07075 Protein of unknown function (DUF1343) TQ38_RS09800 PF00579 tRNA synthetases class I (W and Y) TQ38_RS09800 PF01479 S4 domain TQ38_RS09810 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS09810 PF00593 TonB dependent receptor TQ38_RS09815 PF05977 Transmembrane secretion effector TQ38_RS09820 PF00291 Pyridoxal-phosphate dependent enzyme TQ38_RS09825 PF01502 Phosphoribosyl-AMP cyclohydrolase TQ38_RS09830 PF00156 Phosphoribosyl transferase domain TQ38_RS09840 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TQ38_RS09840 PF02896 PEP-utilising enzyme, TIM barrel domain TQ38_RS09840 PF00391 PEP-utilising enzyme, mobile domain TQ38_RS09845 PF02092 Glycyl-tRNA synthetase beta subunit TQ38_RS09845 PF05746 DALR anticodon binding domain TQ38_RS09850 PF02091 Glycyl-tRNA synthetase alpha subunit TQ38_RS09865 PF14693 Ribosomal protein TL5, C-terminal domain TQ38_RS09865 PF01386 Ribosomal L25p family TQ38_RS09870 PF01195 Peptidyl-tRNA hydrolase TQ38_RS09885 PF01926 50S ribosome-binding GTPase TQ38_RS09885 PF06071 Protein of unknown function (DUF933) TQ38_RS09890 PF00376 MerR family regulatory protein TQ38_RS09890 PF09278 MerR, DNA binding TQ38_RS09905 PF01119 DNA mismatch repair protein, C-terminal domain TQ38_RS09905 PF08676 MutL C terminal dimerisation domain TQ38_RS09915 PF04085 rod shape-determining protein MreC TQ38_RS09930 PF01098 Cell cycle protein TQ38_RS09965 PF17243 POTRA domain TamA domain 1 TQ38_RS09965 PF01103 Surface antigen TQ38_RS09965 PF07244 Surface antigen variable number repeat TQ38_RS09970 PF03631 Virulence factor BrkB TQ38_RS09975 PF00106 short chain dehydrogenase TQ38_RS09980 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS09985 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TQ38_RS09985 PF00925 GTP cyclohydrolase II TQ38_RS09990 PF00885 6,7-dimethyl-8-ribityllumazine synthase TQ38_RS10005 PF00113 Enolase, C-terminal TIM barrel domain TQ38_RS10005 PF03952 Enolase, N-terminal domain TQ38_RS10035 PF01272 Transcription elongation factor, GreA/GreB, C-term TQ38_RS10035 PF03449 Transcription elongation factor, N-terminal TQ38_RS10040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TQ38_RS10040 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TQ38_RS10040 PF02142 MGS-like domain TQ38_RS10050 PF00117 Glutamine amidotransferase class-I TQ38_RS10050 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TQ38_RS10055 PF09424 Yqey-like protein TQ38_RS10060 PF01807 CHC2 zinc finger TQ38_RS10060 PF08278 DNA primase DnaG DnaB-binding TQ38_RS10060 PF08275 DNA primase catalytic core, N-terminal domain TQ38_RS10060 PF10410 DnaB-helicase binding domain of primase TQ38_RS10065 PF04546 Sigma-70, non-essential region TQ38_RS10065 PF03979 Sigma-70 factor, region 1.1 TQ38_RS10065 PF04545 Sigma-70, region 4 TQ38_RS10065 PF04542 Sigma-70 region 2 TQ38_RS10065 PF00140 Sigma-70 factor, region 1.2 TQ38_RS10065 PF04539 Sigma-70 region 3 TQ38_RS10075 PF02502 Ribose/Galactose Isomerase TQ38_RS10080 PF00464 Serine hydroxymethyltransferase TQ38_RS10090 PF03477 ATP cone domain TQ38_RS10095 PF00588 SpoU rRNA Methylase family TQ38_RS10105 PF01479 S4 domain TQ38_RS10105 PF00163 Ribosomal protein S4/S9 N-terminal domain TQ38_RS10115 PF07676 WD40-like Beta Propeller Repeat TQ38_RS10115 PF00326 Prolyl oligopeptidase family TQ38_RS10120 PF01702 Queuine tRNA-ribosyltransferase TQ38_RS10130 PF01061 ABC-2 type transporter TQ38_RS10135 PF00005 ABC transporter TQ38_RS10140 PF02547 Queuosine biosynthesis protein TQ38_RS10145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TQ38_RS10150 PF01467 Cytidylyltransferase-like TQ38_RS10155 PF00348 Polyprenyl synthetase TQ38_RS10160 PF02609 Exonuclease VII small subunit TQ38_RS10165 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TQ38_RS10165 PF02769 AIR synthase related protein, C-terminal domain TQ38_RS10165 PF00586 AIR synthase related protein, N-terminal domain TQ38_RS10185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TQ38_RS10185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TQ38_RS10185 PF00205 Thiamine pyrophosphate enzyme, central domain TQ38_RS10190 PF10369 Small subunit of acetolactate synthase TQ38_RS10195 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TQ38_RS10195 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TQ38_RS10205 PF00437 Type II/IV secretion system protein TQ38_RS10215 PF04264 YceI-like domain TQ38_RS10245 PF00266 Aminotransferase class-V TQ38_RS10250 PF02347 Glycine cleavage system P-protein TQ38_RS10255 PF01597 Glycine cleavage H-protein TQ38_RS10260 PF08669 Glycine cleavage T-protein C-terminal barrel domain TQ38_RS10260 PF01571 Aminomethyltransferase folate-binding domain TQ38_RS10270 PF13286 Phosphohydrolase-associated domain TQ38_RS10270 PF01966 HD domain TQ38_RS10280 PF02233 NAD(P) transhydrogenase beta subunit TQ38_RS10285 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch TQ38_RS10290 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TQ38_RS10290 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TQ38_RS10300 PF00158 Sigma-54 interaction domain TQ38_RS10300 PF02954 Bacterial regulatory protein, Fis family TQ38_RS10300 PF00072 Response regulator receiver domain TQ38_RS10310 PF00809 Pterin binding enzyme TQ38_RS10315 PF01555 DNA methylase TQ38_RS10315 PF18755 Restriction Enzyme Adenine Methylase Associated TQ38_RS10320 PF01351 Ribonuclease HII TQ38_RS10325 PF07995 Glucose / Sorbosone dehydrogenase TQ38_RS10340 PF00293 NUDIX domain TQ38_RS10345 PF12626 Polymerase A arginine-rich C-terminus TQ38_RS10345 PF01743 Poly A polymerase head domain TQ38_RS10345 PF12627 Probable RNA and SrmB- binding site of polymerase A TQ38_RS10360 PF03989 DNA gyrase C-terminal domain, beta-propeller TQ38_RS10360 PF00521 DNA gyrase/topoisomerase IV, subunit A TQ38_RS10370 PF00111 2Fe-2S iron-sulfur cluster binding domain TQ38_RS10375 PF00266 Aminotransferase class-V TQ38_RS10380 PF00266 Aminotransferase class-V TQ38_RS10385 PF02129 X-Pro dipeptidyl-peptidase (S15 family) TQ38_RS10405 PF01293 Phosphoenolpyruvate carboxykinase TQ38_RS10410 PF00072 Response regulator receiver domain TQ38_RS10410 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS10415 PF00672 HAMP domain TQ38_RS10415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS10415 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS10415 PF13755 Sensor N-terminal transmembrane domain TQ38_RS10415 PF13756 Stimulus-sensing domain TQ38_RS10425 PF03668 P-loop ATPase protein family TQ38_RS10430 PF03830 PTS system sorbose subfamily IIB component TQ38_RS10430 PF03610 PTS system fructose IIA component TQ38_RS10435 PF00381 PTS HPr component phosphorylation site TQ38_RS10440 PF08032 RNA 2'-O ribose methyltransferase substrate binding TQ38_RS10440 PF00588 SpoU rRNA Methylase family TQ38_RS10450 PF02646 RmuC family TQ38_RS10455 PF01327 Polypeptide deformylase TQ38_RS10460 PF13662 Toprim domain TQ38_RS10460 PF02132 RecR protein TQ38_RS10465 PF02911 Formyl transferase, C-terminal domain TQ38_RS10465 PF00551 Formyl transferase TQ38_RS10475 PF01416 tRNA pseudouridine synthase TQ38_RS10480 PF13426 PAS domain TQ38_RS10480 PF08447 PAS fold TQ38_RS10480 PF07536 HWE histidine kinase TQ38_RS10485 PF12556 Cobaltochelatase CobS subunit N terminal TQ38_RS10485 PF07728 AAA domain (dynein-related subfamily) TQ38_RS10485 PF08406 CbbQ/NirQ/NorQ C-terminal TQ38_RS10490 PF01638 HxlR-like helix-turn-helix TQ38_RS10505 PF07237 Protein of unknown function (DUF1428) TQ38_RS10545 PF01722 BolA-like protein TQ38_RS10550 PF01634 ATP phosphoribosyltransferase TQ38_RS10555 PF00815 Histidinol dehydrogenase TQ38_RS10560 PF01029 NusB family TQ38_RS10565 PF02769 AIR synthase related protein, C-terminal domain TQ38_RS10565 PF00586 AIR synthase related protein, N-terminal domain TQ38_RS10570 PF03030 Inorganic H+ pyrophosphatase TQ38_RS10590 PF03441 FAD binding domain of DNA photolyase TQ38_RS10590 PF00875 DNA photolyase TQ38_RS10595 PF01569 PAP2 superfamily TQ38_RS10605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TQ38_RS10610 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TQ38_RS10610 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TQ38_RS10610 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TQ38_RS10615 PF00293 NUDIX domain TQ38_RS10625 PF01029 NusB family TQ38_RS10625 PF01189 16S rRNA methyltransferase RsmB/F TQ38_RS10630 PF00478 IMP dehydrogenase / GMP reductase domain TQ38_RS10630 PF00571 CBS domain TQ38_RS10635 PF04151 Bacterial pre-peptidase C-terminal domain TQ38_RS10635 PF04389 Peptidase family M28 TQ38_RS10640 PF04228 Putative neutral zinc metallopeptidase TQ38_RS10655 PF01541 GIY-YIG catalytic domain TQ38_RS10655 PF02151 UvrB/uvrC motif TQ38_RS10655 PF08459 UvrC Helix-hairpin-helix N-terminal TQ38_RS10665 PF01176 Translation initiation factor 1A / IF-1 TQ38_RS10670 PF02545 Maf-like protein TQ38_RS10680 PF03884 DNA gyrase inhibitor YacG TQ38_RS10690 PF00529 HlyD membrane-fusion protein of T1SS TQ38_RS10690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TQ38_RS10695 PF00873 AcrB/AcrD/AcrF family TQ38_RS10700 PF02321 Outer membrane efflux protein TQ38_RS10710 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS10710 PF00593 TonB dependent receptor TQ38_RS10715 PF05977 Transmembrane secretion effector TQ38_RS10720 PF02803 Thiolase, C-terminal domain TQ38_RS10720 PF00108 Thiolase, N-terminal domain TQ38_RS10725 PF01047 MarR family TQ38_RS10735 PF02515 CoA-transferase family III TQ38_RS10745 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS10745 PF00501 AMP-binding enzyme TQ38_RS10760 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS10775 PF00171 Aldehyde dehydrogenase family TQ38_RS10785 PF12802 MarR family TQ38_RS10795 PF00501 AMP-binding enzyme TQ38_RS10795 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS10800 PF00107 Zinc-binding dehydrogenase TQ38_RS10800 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS10810 PF00459 Inositol monophosphatase family TQ38_RS10815 PF00009 Elongation factor Tu GTP binding domain TQ38_RS10820 PF01507 Phosphoadenosine phosphosulfate reductase family TQ38_RS10830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS10830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS10835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS10835 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS10835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS10840 PF00355 Rieske [2Fe-2S] domain TQ38_RS10845 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS10845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS10845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS10850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS10850 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS10850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS10860 PF02779 Transketolase, pyrimidine binding domain TQ38_RS10860 PF02780 Transketolase, C-terminal domain TQ38_RS10865 PF00676 Dehydrogenase E1 component TQ38_RS10875 PF00912 Transglycosylase TQ38_RS10875 PF17092 Penicillin-binding protein OB-like domain TQ38_RS10875 PF00905 Penicillin binding protein transpeptidase domain TQ38_RS10880 PF11741 AMIN domain TQ38_RS10880 PF01520 N-acetylmuramoyl-L-alanine amidase TQ38_RS10885 PF12111 Polyribonucleotide phosphorylase C terminal TQ38_RS10885 PF10150 Ribonuclease E/G family TQ38_RS10885 PF00575 S1 RNA binding domain TQ38_RS10895 PF13085 2Fe-2S iron-sulfur cluster binding domain TQ38_RS10905 PF03969 AFG1-like ATPase TQ38_RS10910 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS10910 PF00563 EAL domain TQ38_RS10910 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS10915 PF13537 Glutamine amidotransferase domain TQ38_RS10915 PF00733 Asparagine synthase TQ38_RS10940 PF13401 AAA domain TQ38_RS10940 PF01471 Putative peptidoglycan binding domain TQ38_RS10965 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TQ38_RS10965 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TQ38_RS10970 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS10970 PF00668 Condensation domain TQ38_RS10970 PF00501 AMP-binding enzyme TQ38_RS10970 PF00550 Phosphopantetheine attachment site TQ38_RS10995 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS11000 PF12697 Alpha/beta hydrolase family TQ38_RS11010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS11010 PF03459 TOBE domain TQ38_RS11020 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS11025 PF00005 ABC transporter TQ38_RS11025 PF03459 TOBE domain TQ38_RS11030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS11030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS11030 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS11040 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS11050 PF00128 Alpha amylase, catalytic domain TQ38_RS11050 PF03714 Bacterial pullanase-associated domain TQ38_RS11050 PF02806 Alpha amylase, C-terminal all-beta domain TQ38_RS11055 PF00128 Alpha amylase, catalytic domain TQ38_RS11060 PF14508 Glycosyl-hydrolase 97 N-terminal TQ38_RS11060 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation TQ38_RS11060 PF10566 Glycoside hydrolase 97 TQ38_RS11085 PF13426 PAS domain TQ38_RS11085 PF07536 HWE histidine kinase TQ38_RS11085 PF08447 PAS fold TQ38_RS11090 PF01451 Low molecular weight phosphotyrosine protein phosphatase TQ38_RS11095 PF00583 Acetyltransferase (GNAT) family TQ38_RS11100 PF01259 SAICAR synthetase TQ38_RS11105 PF05193 Peptidase M16 inactive domain TQ38_RS11105 PF00675 Insulinase (Peptidase family M16) TQ38_RS11120 PF12804 MobA-like NTP transferase domain TQ38_RS11120 PF00132 Bacterial transferase hexapeptide (six repeats) TQ38_RS11120 PF14602 Hexapeptide repeat of succinyl-transferase TQ38_RS11140 PF01380 SIS domain TQ38_RS11145 PF08447 PAS fold TQ38_RS11145 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS11145 PF08448 PAS fold TQ38_RS11145 PF00563 EAL domain TQ38_RS11155 PF09334 tRNA synthetases class I (M) TQ38_RS11155 PF01588 Putative tRNA binding domain TQ38_RS11160 PF02785 Biotin carboxylase C-terminal domain TQ38_RS11160 PF00364 Biotin-requiring enzyme TQ38_RS11160 PF00289 Biotin carboxylase, N-terminal domain TQ38_RS11160 PF18140 Propionyl-coenzyme A carboxylase BT domain TQ38_RS11160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TQ38_RS11170 PF04055 Radical SAM superfamily TQ38_RS11170 PF06968 Biotin and Thiamin Synthesis associated domain TQ38_RS11175 PF01642 Methylmalonyl-CoA mutase TQ38_RS11175 PF02310 B12 binding domain TQ38_RS11185 PF00108 Thiolase, N-terminal domain TQ38_RS11185 PF02803 Thiolase, C-terminal domain TQ38_RS11190 PF01039 Carboxyl transferase domain TQ38_RS11195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TQ38_RS11195 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS11205 PF00342 Phosphoglucose isomerase TQ38_RS11210 PF10502 Signal peptidase, peptidase S26 TQ38_RS11215 PF14622 Ribonuclease-III-like TQ38_RS11215 PF00035 Double-stranded RNA binding motif TQ38_RS11220 PF07650 KH domain TQ38_RS11220 PF01926 50S ribosome-binding GTPase TQ38_RS11245 PF01396 Topoisomerase DNA binding C4 zinc finger TQ38_RS11245 PF13368 Topoisomerase C-terminal repeat TQ38_RS11245 PF01751 Toprim domain TQ38_RS11245 PF01131 DNA topoisomerase TQ38_RS11255 PF17782 DprA winged helix domain TQ38_RS11255 PF02481 DNA recombination-mediator protein A TQ38_RS11260 PF02660 Glycerol-3-phosphate acyltransferase TQ38_RS11265 PF01177 Asp/Glu/Hydantoin racemase TQ38_RS11275 PF00155 Aminotransferase class I and II TQ38_RS11280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TQ38_RS11290 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TQ38_RS11305 PF16653 Saccharopine dehydrogenase C-terminal domain TQ38_RS11305 PF03435 Saccharopine dehydrogenase NADP binding domain TQ38_RS11320 PF00291 Pyridoxal-phosphate dependent enzyme TQ38_RS11320 PF13291 ACT domain TQ38_RS11335 PF05958 tRNA (Uracil-5-)-methyltransferase TQ38_RS11340 PF01256 Carbohydrate kinase TQ38_RS11340 PF03853 YjeF-related protein N-terminus TQ38_RS11345 PF00920 Dehydratase family TQ38_RS11355 PF08544 GHMP kinases C terminal TQ38_RS11370 PF01464 Transglycosylase SLT domain TQ38_RS11370 PF14718 Soluble lytic murein transglycosylase L domain TQ38_RS11375 PF00994 Probable molybdopterin binding domain TQ38_RS11385 PF02446 4-alpha-glucanotransferase TQ38_RS11390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TQ38_RS11390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TQ38_RS11390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TQ38_RS11390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TQ38_RS11395 PF00034 Cytochrome c TQ38_RS11395 PF03150 Di-haem cytochrome c peroxidase TQ38_RS11405 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS11405 PF00593 TonB dependent receptor TQ38_RS11410 PF04002 RadC-like JAB domain TQ38_RS11430 PF06421 GTP-binding protein LepA C-terminus TQ38_RS11430 PF00679 Elongation factor G C-terminus TQ38_RS11430 PF00009 Elongation factor Tu GTP binding domain TQ38_RS11435 PF13188 PAS domain TQ38_RS11435 PF00563 EAL domain TQ38_RS11435 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS11435 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS11440 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS11450 PF00712 DNA polymerase III beta subunit, N-terminal domain TQ38_RS11450 PF02768 DNA polymerase III beta subunit, C-terminal domain TQ38_RS11450 PF02767 DNA polymerase III beta subunit, central domain TQ38_RS11460 PF00698 Acyl transferase domain TQ38_RS11475 PF08245 Mur ligase middle domain TQ38_RS11475 PF02875 Mur ligase family, glutamate ligase domain TQ38_RS11475 PF01225 Mur ligase family, catalytic domain TQ38_RS11480 PF05661 Protein of unknown function (DUF808) TQ38_RS11485 PF00669 Bacterial flagellin N-terminal helical region TQ38_RS11485 PF00700 Bacterial flagellin C-terminal helical region TQ38_RS11485 PF00669 Bacterial flagellin N-terminal helical region TQ38_RS11485 PF00700 Bacterial flagellin C-terminal helical region TQ38_RS11495 PF03167 Uracil DNA glycosylase superfamily TQ38_RS11530 PF16884 N-terminal domain of oxidoreductase TQ38_RS11530 PF00107 Zinc-binding dehydrogenase TQ38_RS11550 PF00672 HAMP domain TQ38_RS11550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS11550 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS11560 PF13091 PLD-like domain TQ38_RS11565 PF02554 Carbon starvation protein CstA TQ38_RS11565 PF13722 5TM C-terminal transporter carbon starvation CstA TQ38_RS11570 PF04328 Selenoprotein, putative TQ38_RS11575 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS11580 PF03060 Nitronate monooxygenase TQ38_RS11590 PF00271 Helicase conserved C-terminal domain TQ38_RS11590 PF00270 DEAD/DEAH box helicase TQ38_RS11600 PF02913 FAD linked oxidases, C-terminal domain TQ38_RS11600 PF01565 FAD binding domain TQ38_RS11615 PF00072 Response regulator receiver domain TQ38_RS11625 PF00180 Isocitrate/isopropylmalate dehydrogenase TQ38_RS11630 PF02668 Taurine catabolism dioxygenase TauD, TfdA family TQ38_RS11650 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS11650 PF00501 AMP-binding enzyme TQ38_RS11655 PF07733 Bacterial DNA polymerase III alpha NTPase domain TQ38_RS11655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TQ38_RS11655 PF14579 Helix-hairpin-helix motif TQ38_RS11655 PF02811 PHP domain TQ38_RS11660 PF00135 Carboxylesterase family TQ38_RS11665 PF00255 Glutathione peroxidase TQ38_RS11675 PF00005 ABC transporter TQ38_RS11680 PF12704 MacB-like periplasmic core domain TQ38_RS11680 PF02687 FtsX-like permease family TQ38_RS11690 PF00156 Phosphoribosyl transferase domain TQ38_RS11690 PF13537 Glutamine amidotransferase domain TQ38_RS11695 PF00106 short chain dehydrogenase TQ38_RS11710 PF03965 Penicillinase repressor TQ38_RS11720 PF02910 Fumarate reductase flavoprotein C-term TQ38_RS11720 PF00890 FAD binding domain TQ38_RS11725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TQ38_RS11730 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TQ38_RS11735 PF00753 Metallo-beta-lactamase superfamily TQ38_RS11755 PF00533 BRCA1 C Terminus (BRCT) domain TQ38_RS11755 PF01653 NAD-dependent DNA ligase adenylation domain TQ38_RS11755 PF03120 NAD-dependent DNA ligase OB-fold domain TQ38_RS11755 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TQ38_RS11755 PF12826 Helix-hairpin-helix motif TQ38_RS11765 PF02463 RecF/RecN/SMC N terminal domain TQ38_RS11770 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS11770 PF00593 TonB dependent receptor TQ38_RS11775 PF13525 Outer membrane lipoprotein TQ38_RS11780 PF00999 Sodium/hydrogen exchanger family TQ38_RS11780 PF02254 TrkA-N domain TQ38_RS11785 PF04960 Glutaminase TQ38_RS11795 PF01411 tRNA synthetases class II (A) TQ38_RS11795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TQ38_RS11795 PF02272 DHHA1 domain TQ38_RS11800 PF00154 recA bacterial DNA recombination protein TQ38_RS11805 PF00072 Response regulator receiver domain TQ38_RS11805 PF13188 PAS domain TQ38_RS11805 PF08448 PAS fold TQ38_RS11805 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS11805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS11815 PF01668 SmpB protein TQ38_RS11820 PF00701 Dihydrodipicolinate synthetase family TQ38_RS11825 PF01464 Transglycosylase SLT domain TQ38_RS11825 PF14718 Soluble lytic murein transglycosylase L domain TQ38_RS11835 PF01272 Transcription elongation factor, GreA/GreB, C-term TQ38_RS11835 PF03449 Transcription elongation factor, N-terminal TQ38_RS11840 PF01925 Sulfite exporter TauE/SafE TQ38_RS11865 PF04055 Radical SAM superfamily TQ38_RS11870 PF03466 LysR substrate binding domain TQ38_RS11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS11875 PF04379 ApaG domain TQ38_RS11880 PF01053 Cys/Met metabolism PLP-dependent enzyme TQ38_RS11900 PF00180 Isocitrate/isopropylmalate dehydrogenase TQ38_RS11905 PF02565 Recombination protein O C terminal TQ38_RS11905 PF11967 Recombination protein O N terminal TQ38_RS11915 PF03073 TspO/MBR family TQ38_RS11920 PF01728 FtsJ-like methyltransferase TQ38_RS11920 PF01479 S4 domain TQ38_RS11930 PF01063 Amino-transferase class IV TQ38_RS11935 PF02798 Glutathione S-transferase, N-terminal domain TQ38_RS11950 PF03389 MobA/MobL family TQ38_RS11950 PF17841 BID domain of Bartonella effector protein (Bep) TQ38_RS11950 PF01443 Viral (Superfamily 1) RNA helicase TQ38_RS11975 PF00072 Response regulator receiver domain TQ38_RS11975 PF13426 PAS domain TQ38_RS11975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS11980 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS11980 PF08448 PAS fold TQ38_RS11980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS11980 PF13188 PAS domain TQ38_RS11980 PF00072 Response regulator receiver domain TQ38_RS11990 PF00561 alpha/beta hydrolase fold TQ38_RS11995 PF00034 Cytochrome c TQ38_RS12000 PF03741 Integral membrane protein TerC family TQ38_RS12005 PF01820 D-ala D-ala ligase N-terminus TQ38_RS12005 PF07478 D-ala D-ala ligase C-terminus TQ38_RS12015 PF03600 Citrate transporter TQ38_RS12030 PF00072 Response regulator receiver domain TQ38_RS12030 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS12035 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS12035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS12050 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain TQ38_RS12050 PF02129 X-Pro dipeptidyl-peptidase (S15 family) TQ38_RS12055 PF02705 K+ potassium transporter TQ38_RS12070 PF08534 Redoxin TQ38_RS12075 PF01578 Cytochrome C assembly protein TQ38_RS12075 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal TQ38_RS12080 PF03100 CcmE TQ38_RS12085 PF01578 Cytochrome C assembly protein TQ38_RS12100 PF00080 Copper/zinc superoxide dismutase (SODC) TQ38_RS12105 PF01197 Ribosomal protein L31 TQ38_RS12110 PF07977 FabA-like domain TQ38_RS12120 PF07244 Surface antigen variable number repeat TQ38_RS12120 PF01103 Surface antigen TQ38_RS12125 PF17820 PDZ domain TQ38_RS12125 PF02163 Peptidase family M50 TQ38_RS12130 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TQ38_RS12130 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TQ38_RS12130 PF13288 DXP reductoisomerase C-terminal domain TQ38_RS12140 PF01255 Putative undecaprenyl diphosphate synthase TQ38_RS12145 PF01765 Ribosome recycling factor TQ38_RS12150 PF00696 Amino acid kinase family TQ38_RS12160 PF00889 Elongation factor TS TQ38_RS12165 PF00318 Ribosomal protein S2 TQ38_RS12175 PF01066 CDP-alcohol phosphatidyltransferase TQ38_RS12180 PF02666 Phosphatidylserine decarboxylase TQ38_RS12190 PF08032 RNA 2'-O ribose methyltransferase substrate binding TQ38_RS12190 PF00588 SpoU rRNA Methylase family TQ38_RS12200 PF00216 Bacterial DNA-binding protein TQ38_RS12205 PF01245 Ribosomal protein L19 TQ38_RS12210 PF01746 tRNA (Guanine-1)-methyltransferase TQ38_RS12215 PF01782 RimM N-terminal domain TQ38_RS12215 PF05239 PRC-barrel domain TQ38_RS12220 PF00886 Ribosomal protein S16 TQ38_RS12225 PF00448 SRP54-type protein, GTPase domain TQ38_RS12225 PF02978 Signal peptide binding domain TQ38_RS12225 PF02881 SRP54-type protein, helical bundle domain TQ38_RS12240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TQ38_RS12245 PF02224 Cytidylate kinase TQ38_RS12260 PF00575 S1 RNA binding domain TQ38_RS12270 PF16123 Hydroxyacylglutathione hydrolase C-terminus TQ38_RS12270 PF00753 Metallo-beta-lactamase superfamily TQ38_RS12280 PF00430 ATP synthase B/B' CF(0) TQ38_RS12285 PF00430 ATP synthase B/B' CF(0) TQ38_RS12290 PF00137 ATP synthase subunit C TQ38_RS12295 PF00119 ATP synthase A chain TQ38_RS12320 PF04002 RadC-like JAB domain TQ38_RS12330 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS12335 PF00206 Lyase TQ38_RS12335 PF10397 Adenylosuccinate lyase C-terminus TQ38_RS12345 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TQ38_RS12360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TQ38_RS12370 PF00291 Pyridoxal-phosphate dependent enzyme TQ38_RS12380 PF00290 Tryptophan synthase alpha chain TQ38_RS12385 PF08245 Mur ligase middle domain TQ38_RS12385 PF02875 Mur ligase family, glutamate ligase domain TQ38_RS12390 PF07690 Major Facilitator Superfamily TQ38_RS12395 PF01479 S4 domain TQ38_RS12395 PF00849 RNA pseudouridylate synthase TQ38_RS12410 PF00580 UvrD/REP helicase N-terminal domain TQ38_RS12410 PF13361 UvrD-like helicase C-terminal domain TQ38_RS12430 PF01641 SelR domain TQ38_RS12435 PF02469 Fasciclin domain TQ38_RS12445 PF04542 Sigma-70 region 2 TQ38_RS12445 PF08281 Sigma-70, region 4 TQ38_RS12450 PF00588 SpoU rRNA Methylase family TQ38_RS12465 PF00871 Acetokinase family TQ38_RS12495 PF02796 Helix-turn-helix domain of resolvase TQ38_RS12495 PF00239 Resolvase, N terminal domain TQ38_RS12520 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TQ38_RS12545 PF00795 Carbon-nitrogen hydrolase TQ38_RS12555 PF01625 Peptide methionine sulfoxide reductase TQ38_RS12565 PF01189 16S rRNA methyltransferase RsmB/F TQ38_RS12565 PF01029 NusB family TQ38_RS12580 PF13533 Biotin-lipoyl like TQ38_RS12590 PF04632 Fusaric acid resistance protein family TQ38_RS12595 PF01047 MarR family TQ38_RS12605 PF00709 Adenylosuccinate synthetase TQ38_RS12610 PF13393 Histidyl-tRNA synthetase TQ38_RS12615 PF00890 FAD binding domain TQ38_RS12620 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS12625 PF09856 Predicted transcriptional regulator (DUF2083) TQ38_RS12625 PF01381 Helix-turn-helix TQ38_RS12625 PF06114 IrrE N-terminal-like domain TQ38_RS12630 PF00463 Isocitrate lyase family TQ38_RS12635 PF13188 PAS domain TQ38_RS12635 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS12635 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS12635 PF00563 EAL domain TQ38_RS12640 PF08448 PAS fold TQ38_RS12640 PF08447 PAS fold TQ38_RS12640 PF00563 EAL domain TQ38_RS12640 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS12645 PF02909 Tetracyclin repressor-like, C-terminal domain TQ38_RS12645 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS12650 PF00111 2Fe-2S iron-sulfur cluster binding domain TQ38_RS12655 PF00067 Cytochrome P450 TQ38_RS12670 PF07690 Major Facilitator Superfamily TQ38_RS12675 PF13533 Biotin-lipoyl like TQ38_RS12680 PF02321 Outer membrane efflux protein TQ38_RS12685 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS12700 PF02567 Phenazine biosynthesis-like protein TQ38_RS12725 PF00764 Arginosuccinate synthase TQ38_RS12730 PF03330 Lytic transglycolase TQ38_RS12735 PF00962 Adenosine/AMP deaminase TQ38_RS12740 PF01979 Amidohydrolase family TQ38_RS12750 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TQ38_RS12750 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TQ38_RS12755 PF03450 CO dehydrogenase flavoprotein C-terminal domain TQ38_RS12755 PF00941 FAD binding domain in molybdopterin dehydrogenase TQ38_RS12760 PF00576 HIUase/Transthyretin family TQ38_RS12765 PF13454 FAD-NAD(P)-binding TQ38_RS12785 PF00266 Aminotransferase class-V TQ38_RS12790 PF07687 Peptidase dimerisation domain TQ38_RS12790 PF01546 Peptidase family M20/M25/M40 TQ38_RS12800 PF01048 Phosphorylase superfamily TQ38_RS12805 PF00860 Permease family TQ38_RS12810 PF01425 Amidase TQ38_RS12820 PF00206 Lyase TQ38_RS12820 PF10415 Fumarase C C-terminus TQ38_RS12825 PF03466 LysR substrate binding domain TQ38_RS12825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS12830 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TQ38_RS12830 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TQ38_RS12835 PF03450 CO dehydrogenase flavoprotein C-terminal domain TQ38_RS12835 PF00941 FAD binding domain in molybdopterin dehydrogenase TQ38_RS12840 PF01799 [2Fe-2S] binding domain TQ38_RS12840 PF00111 2Fe-2S iron-sulfur cluster binding domain TQ38_RS12845 PF00083 Sugar (and other) transporter TQ38_RS12850 PF13404 AsnC-type helix-turn-helix domain TQ38_RS12850 PF01037 Lrp/AsnC ligand binding domain TQ38_RS12855 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TQ38_RS12855 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TQ38_RS12860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS12860 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS12860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS12860 PF12806 Acetyl-CoA dehydrogenase C-terminal like TQ38_RS12865 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS12865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TQ38_RS12865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TQ38_RS12870 PF00108 Thiolase, N-terminal domain TQ38_RS12870 PF02803 Thiolase, C-terminal domain TQ38_RS12885 PF00501 AMP-binding enzyme TQ38_RS12885 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS12890 PF13411 MerR HTH family regulatory protein TQ38_RS12905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS12905 PF12806 Acetyl-CoA dehydrogenase C-terminal like TQ38_RS12905 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS12905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS12915 PF00155 Aminotransferase class I and II TQ38_RS12945 PF04542 Sigma-70 region 2 TQ38_RS12945 PF08281 Sigma-70, region 4 TQ38_RS12955 PF00535 Glycosyl transferase family 2 TQ38_RS12965 PF13807 G-rich domain on putative tyrosine kinase TQ38_RS12965 PF13614 AAA domain TQ38_RS12965 PF02706 Chain length determinant protein TQ38_RS12990 PF00535 Glycosyl transferase family 2 TQ38_RS12995 PF00722 Glycosyl hydrolases family 16 TQ38_RS13000 PF00083 Sugar (and other) transporter TQ38_RS13010 PF00722 Glycosyl hydrolases family 16 TQ38_RS13010 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) TQ38_RS13020 PF04230 Polysaccharide pyruvyl transferase TQ38_RS13030 PF02563 Polysaccharide biosynthesis/export protein TQ38_RS13045 PF02321 Outer membrane efflux protein TQ38_RS13050 PF00664 ABC transporter transmembrane region TQ38_RS13050 PF00005 ABC transporter TQ38_RS13055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TQ38_RS13055 PF00529 HlyD membrane-fusion protein of T1SS TQ38_RS13060 PF02397 Bacterial sugar transferase TQ38_RS13065 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TQ38_RS13065 PF18390 Glycogen debranching enzyme C-terminal domain TQ38_RS13065 PF00128 Alpha amylase, catalytic domain TQ38_RS13070 PF00534 Glycosyl transferases group 1 TQ38_RS13070 PF08323 Starch synthase catalytic domain TQ38_RS13075 PF00483 Nucleotidyl transferase TQ38_RS13080 PF00128 Alpha amylase, catalytic domain TQ38_RS13080 PF02806 Alpha amylase, C-terminal all-beta domain TQ38_RS13080 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TQ38_RS13085 PF00343 Carbohydrate phosphorylase TQ38_RS13095 PF07729 FCD domain TQ38_RS13095 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS13100 PF00795 Carbon-nitrogen hydrolase TQ38_RS13100 PF00583 Acetyltransferase (GNAT) family TQ38_RS13110 PF14489 QueF-like protein TQ38_RS13125 PF01053 Cys/Met metabolism PLP-dependent enzyme TQ38_RS13130 PF05552 Conserved TM helix TQ38_RS13130 PF00924 Mechanosensitive ion channel TQ38_RS13135 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS13135 PF05231 MASE1 TQ38_RS13135 PF08447 PAS fold TQ38_RS13135 PF08448 PAS fold TQ38_RS13135 PF13426 PAS domain TQ38_RS13135 PF00563 EAL domain TQ38_RS13145 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TQ38_RS13145 PF10414 Sirohaem synthase dimerisation region TQ38_RS13145 PF14824 Sirohaem biosynthesis protein central TQ38_RS13165 PF01507 Phosphoadenosine phosphosulfate reductase family TQ38_RS13170 PF07690 Major Facilitator Superfamily TQ38_RS13180 PF14850 DNA-binding domain of Proline dehydrogenase TQ38_RS13180 PF00171 Aldehyde dehydrogenase family TQ38_RS13180 PF01619 Proline dehydrogenase TQ38_RS13180 PF18327 Proline utilization A proline dehydrogenase N-terminal domain TQ38_RS13185 PF01037 Lrp/AsnC ligand binding domain TQ38_RS13200 PF02634 FdhD/NarQ family TQ38_RS13205 PF17848 Acetyl-coA carboxylase zinc finger domain TQ38_RS13205 PF01039 Carboxyl transferase domain TQ38_RS13210 PF00364 Biotin-requiring enzyme TQ38_RS13215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TQ38_RS13215 PF02785 Biotin carboxylase C-terminal domain TQ38_RS13215 PF00289 Biotin carboxylase, N-terminal domain TQ38_RS13220 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TQ38_RS13240 PF01322 Cytochrome C' TQ38_RS13250 PF00860 Permease family TQ38_RS13255 PF01979 Amidohydrolase family TQ38_RS13265 PF00593 TonB dependent receptor TQ38_RS13265 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS13265 PF07660 Secretin and TonB N terminus short domain TQ38_RS13280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS13280 PF03466 LysR substrate binding domain TQ38_RS13285 PF00156 Phosphoribosyl transferase domain TQ38_RS13290 PF03641 Possible lysine decarboxylase TQ38_RS13295 PF17760 UvrA interaction domain TQ38_RS13295 PF17755 UvrA DNA-binding domain TQ38_RS13310 PF03109 ABC1 family TQ38_RS13315 PF05036 Sporulation related domain TQ38_RS13315 PF03330 Lytic transglycolase TQ38_RS13320 PF00005 ABC transporter TQ38_RS13325 PF01032 FecCD transport family TQ38_RS13335 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS13335 PF00593 TonB dependent receptor TQ38_RS13350 PF00056 lactate/malate dehydrogenase, NAD binding domain TQ38_RS13350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TQ38_RS13355 PF00549 CoA-ligase TQ38_RS13355 PF02629 CoA binding domain TQ38_RS13360 PF16870 2-oxoglutarate dehydrogenase C-terminal TQ38_RS13360 PF02779 Transketolase, pyrimidine binding domain TQ38_RS13360 PF00676 Dehydrogenase E1 component TQ38_RS13360 PF16078 2-oxoglutarate dehydrogenase N-terminus TQ38_RS13365 PF00364 Biotin-requiring enzyme TQ38_RS13365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TQ38_RS13365 PF02817 e3 binding domain TQ38_RS13370 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS13370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TQ38_RS13380 PF00107 Zinc-binding dehydrogenase TQ38_RS13380 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS13390 PF03458 UPF0126 domain TQ38_RS13400 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TQ38_RS13400 PF00326 Prolyl oligopeptidase family TQ38_RS13405 PF01196 Ribosomal protein L17 TQ38_RS13410 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TQ38_RS13410 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TQ38_RS13410 PF01000 RNA polymerase Rpb3/RpoA insert domain TQ38_RS13415 PF00411 Ribosomal protein S11 TQ38_RS13420 PF00416 Ribosomal protein S13/S18 TQ38_RS13430 PF05191 Adenylate kinase, active site lid TQ38_RS13435 PF00344 SecY translocase TQ38_RS13440 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TQ38_RS13450 PF00327 Ribosomal protein L30p/L7e TQ38_RS13455 PF00333 Ribosomal protein S5, N-terminal domain TQ38_RS13455 PF03719 Ribosomal protein S5, C-terminal domain TQ38_RS13460 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TQ38_RS13465 PF00347 Ribosomal protein L6 TQ38_RS13470 PF00410 Ribosomal protein S8 TQ38_RS13475 PF00253 Ribosomal protein S14p/S29e TQ38_RS13480 PF00281 Ribosomal protein L5 TQ38_RS13480 PF00673 ribosomal L5P family C-terminus TQ38_RS13485 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TQ38_RS13485 PF00467 KOW motif TQ38_RS13490 PF00238 Ribosomal protein L14p/L23e TQ38_RS13495 PF00366 Ribosomal protein S17 TQ38_RS13500 PF00831 Ribosomal L29 protein TQ38_RS13505 PF00252 Ribosomal protein L16p/L10e TQ38_RS13510 PF07650 KH domain TQ38_RS13510 PF00189 Ribosomal protein S3, C-terminal domain TQ38_RS13515 PF00237 Ribosomal protein L22p/L17e TQ38_RS13520 PF00203 Ribosomal protein S19 TQ38_RS13525 PF03947 Ribosomal Proteins L2, C-terminal domain TQ38_RS13525 PF00181 Ribosomal Proteins L2, RNA binding domain TQ38_RS13530 PF00276 Ribosomal protein L23 TQ38_RS13535 PF00573 Ribosomal protein L4/L1 family TQ38_RS13540 PF00297 Ribosomal protein L3 TQ38_RS13545 PF00338 Ribosomal protein S10p/S20e TQ38_RS13555 PF03143 Elongation factor Tu C-terminal domain TQ38_RS13555 PF03144 Elongation factor Tu domain 2 TQ38_RS13555 PF00009 Elongation factor Tu GTP binding domain TQ38_RS13560 PF00009 Elongation factor Tu GTP binding domain TQ38_RS13560 PF00679 Elongation factor G C-terminus TQ38_RS13560 PF03144 Elongation factor Tu domain 2 TQ38_RS13560 PF14492 Elongation Factor G, domain II TQ38_RS13560 PF03764 Elongation factor G, domain IV TQ38_RS13565 PF00177 Ribosomal protein S7p/S5e TQ38_RS13570 PF00164 Ribosomal protein S12/S23 TQ38_RS13595 PF00355 Rieske [2Fe-2S] domain TQ38_RS13595 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TQ38_RS13615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS13615 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS13615 PF01590 GAF domain TQ38_RS13615 PF08446 PAS fold TQ38_RS13615 PF00360 Phytochrome region TQ38_RS13625 PF02417 Chromate transporter TQ38_RS13630 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS13630 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS13630 PF00563 EAL domain TQ38_RS13635 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS13635 PF00072 Response regulator receiver domain TQ38_RS13640 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS13640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS13640 PF00989 PAS fold TQ38_RS13645 PF17763 Glutaminase/Asparaginase C-terminal domain TQ38_RS13645 PF00710 Asparaginase, N-terminal TQ38_RS13650 PF07690 Major Facilitator Superfamily TQ38_RS13675 PF00072 Response regulator receiver domain TQ38_RS13680 PF08281 Sigma-70, region 4 TQ38_RS13680 PF04542 Sigma-70 region 2 TQ38_RS13685 PF00072 Response regulator receiver domain TQ38_RS13695 PF13426 PAS domain TQ38_RS13695 PF07536 HWE histidine kinase TQ38_RS13695 PF13581 Histidine kinase-like ATPase domain TQ38_RS13700 PF04542 Sigma-70 region 2 TQ38_RS13700 PF08281 Sigma-70, region 4 TQ38_RS13710 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TQ38_RS13710 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TQ38_RS13730 PF02082 Transcriptional regulator TQ38_RS13740 PF01925 Sulfite exporter TauE/SafE TQ38_RS13775 PF13593 SBF-like CPA transporter family (DUF4137) TQ38_RS13785 PF00696 Amino acid kinase family TQ38_RS13785 PF01472 PUA domain TQ38_RS13790 PF01018 GTP1/OBG TQ38_RS13790 PF01926 50S ribosome-binding GTPase TQ38_RS13805 PF01027 Inhibitor of apoptosis-promoting Bax1 TQ38_RS13810 PF14748 Pyrroline-5-carboxylate reductase dimerisation TQ38_RS13810 PF03807 NADP oxidoreductase coenzyme F420-dependent TQ38_RS13825 PF00091 Tubulin/FtsZ family, GTPase domain TQ38_RS13825 PF12327 FtsZ family, C-terminal domain TQ38_RS13830 PF02491 SHS2 domain inserted in FTSA TQ38_RS13835 PF08478 POTRA domain, FtsQ-type TQ38_RS13835 PF03799 Cell division protein FtsQ TQ38_RS13840 PF01820 D-ala D-ala ligase N-terminus TQ38_RS13840 PF07478 D-ala D-ala ligase C-terminus TQ38_RS13850 PF01565 FAD binding domain TQ38_RS13850 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TQ38_RS13855 PF02875 Mur ligase family, glutamate ligase domain TQ38_RS13855 PF08245 Mur ligase middle domain TQ38_RS13855 PF01225 Mur ligase family, catalytic domain TQ38_RS13860 PF03033 Glycosyltransferase family 28 N-terminal domain TQ38_RS13860 PF04101 Glycosyltransferase family 28 C-terminal domain TQ38_RS13865 PF01098 Cell cycle protein TQ38_RS13870 PF02875 Mur ligase family, glutamate ligase domain TQ38_RS13870 PF08245 Mur ligase middle domain TQ38_RS13875 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TQ38_RS13875 PF00953 Glycosyl transferase family 4 TQ38_RS13880 PF08245 Mur ligase middle domain TQ38_RS13880 PF02875 Mur ligase family, glutamate ligase domain TQ38_RS13880 PF01225 Mur ligase family, catalytic domain TQ38_RS13885 PF01225 Mur ligase family, catalytic domain TQ38_RS13885 PF08245 Mur ligase middle domain TQ38_RS13885 PF02875 Mur ligase family, glutamate ligase domain TQ38_RS13890 PF00905 Penicillin binding protein transpeptidase domain TQ38_RS13890 PF03717 Penicillin-binding Protein dimerisation domain TQ38_RS13900 PF01795 MraW methylase family TQ38_RS13920 PF00291 Pyridoxal-phosphate dependent enzyme TQ38_RS13920 PF00571 CBS domain TQ38_RS13925 PF00111 2Fe-2S iron-sulfur cluster binding domain TQ38_RS13930 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain TQ38_RS13930 PF00730 HhH-GPD superfamily base excision DNA repair protein TQ38_RS13935 PF01329 Pterin 4 alpha carbinolamine dehydratase TQ38_RS13940 PF00005 ABC transporter TQ38_RS13945 PF03379 CcmB protein TQ38_RS13960 PF08379 Bacterial transglutaminase-like N-terminal region TQ38_RS13960 PF01841 Transglutaminase-like superfamily TQ38_RS13965 PF04168 A predicted alpha-helical domain with a conserved ER motif. TQ38_RS13965 PF14403 Circularly permuted ATP-grasp type 2 TQ38_RS13975 PF02503 Polyphosphate kinase middle domain TQ38_RS13975 PF17941 Polyphosphate kinase C-terminal domain 1 TQ38_RS13975 PF13089 Polyphosphate kinase N-terminal domain TQ38_RS13975 PF13090 Polyphosphate kinase C-terminal domain 2 TQ38_RS13980 PF02541 Ppx/GppA phosphatase family TQ38_RS13985 PF00437 Type II/IV secretion system protein TQ38_RS13990 PF03743 Bacterial conjugation TrbI-like protein TQ38_RS13995 PF03524 Conjugal transfer protein TQ38_RS14005 PF03135 CagE, TrbE, VirB family, component of type IV transporter system TQ38_RS14035 PF01169 Uncharacterized protein family UPF0016 TQ38_RS14040 PF00072 Response regulator receiver domain TQ38_RS14040 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS14050 PF00534 Glycosyl transferases group 1 TQ38_RS14050 PF13439 Glycosyltransferase Family 4 TQ38_RS14055 PF01614 Bacterial transcriptional regulator TQ38_RS14055 PF09339 IclR helix-turn-helix domain TQ38_RS14060 PF00296 Luciferase-like monooxygenase TQ38_RS14065 PF00072 Response regulator receiver domain TQ38_RS14065 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS14070 PF01895 PhoU domain TQ38_RS14075 PF00005 ABC transporter TQ38_RS14080 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS14085 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS14095 PF07396 Phosphate-selective porin O and P TQ38_RS14100 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS14100 PF00989 PAS fold TQ38_RS14100 PF11808 Phosphate regulon sensor protein PhoR TQ38_RS14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS14105 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain TQ38_RS14105 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain TQ38_RS14110 PF00920 Dehydratase family TQ38_RS14115 PF02685 Glucokinase TQ38_RS14120 PF01081 KDPG and KHG aldolase TQ38_RS14130 PF03060 Nitronate monooxygenase TQ38_RS14135 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TQ38_RS14135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TQ38_RS14145 PF00171 Aldehyde dehydrogenase family TQ38_RS14155 PF04958 Arginine N-succinyltransferase beta subunit TQ38_RS14160 PF04996 Succinylarginine dihydrolase TQ38_RS14165 PF13419 Haloacid dehalogenase-like hydrolase TQ38_RS14170 PF13417 Glutathione S-transferase, N-terminal domain TQ38_RS14175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TQ38_RS14180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TQ38_RS14185 PF00351 Biopterin-dependent aromatic amino acid hydroxylase TQ38_RS14190 PF13404 AsnC-type helix-turn-helix domain TQ38_RS14190 PF01037 Lrp/AsnC ligand binding domain TQ38_RS14195 PF05088 Bacterial NAD-glutamate dehydrogenase TQ38_RS14200 PF00480 ROK family TQ38_RS14205 PF02435 Levansucrase/Invertase TQ38_RS14215 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS14220 PF00012 Hsp70 protein TQ38_RS14230 PF01625 Peptide methionine sulfoxide reductase TQ38_RS14245 PF03169 OPT oligopeptide transporter protein TQ38_RS14250 PF12804 MobA-like NTP transferase domain TQ38_RS14250 PF00132 Bacterial transferase hexapeptide (six repeats) TQ38_RS14250 PF14602 Hexapeptide repeat of succinyl-transferase TQ38_RS14255 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS14255 PF00593 TonB dependent receptor TQ38_RS14265 PF02668 Taurine catabolism dioxygenase TauD, TfdA family TQ38_RS14270 PF00296 Luciferase-like monooxygenase TQ38_RS14275 PF00296 Luciferase-like monooxygenase TQ38_RS14285 PF05995 Cysteine dioxygenase type I TQ38_RS14290 PF00005 ABC transporter TQ38_RS14295 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS14300 PF03466 LysR substrate binding domain TQ38_RS14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS14320 PF01218 Coproporphyrinogen III oxidase TQ38_RS14325 PF00083 Sugar (and other) transporter TQ38_RS14330 PF00296 Luciferase-like monooxygenase TQ38_RS14335 PF00561 alpha/beta hydrolase fold TQ38_RS14340 PF01042 Endoribonuclease L-PSP TQ38_RS14345 PF00857 Isochorismatase family TQ38_RS14355 PF04607 Region found in RelA / SpoT proteins TQ38_RS14355 PF13291 ACT domain TQ38_RS14355 PF02824 TGS domain TQ38_RS14380 PF05198 Translation initiation factor IF-3, N-terminal domain TQ38_RS14380 PF00707 Translation initiation factor IF-3, C-terminal domain TQ38_RS14385 PF01556 DnaJ C terminal domain TQ38_RS14385 PF00684 DnaJ central domain TQ38_RS14385 PF00226 DnaJ domain TQ38_RS14390 PF00691 OmpA family TQ38_RS14395 PF04052 TolB amino-terminal domain TQ38_RS14395 PF07676 WD40-like Beta Propeller Repeat TQ38_RS14415 PF02472 Biopolymer transport protein ExbD/TolR TQ38_RS14420 PF01618 MotA/TolQ/ExbB proton channel family TQ38_RS14425 PF03061 Thioesterase superfamily TQ38_RS14430 PF01230 HIT domain TQ38_RS14435 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TQ38_RS14445 PF00977 Histidine biosynthesis protein TQ38_RS14455 PF00977 Histidine biosynthesis protein TQ38_RS14460 PF00117 Glutamine amidotransferase class-I TQ38_RS14470 PF00475 Imidazoleglycerol-phosphate dehydratase TQ38_RS14485 PF00625 Guanylate kinase TQ38_RS14490 PF00132 Bacterial transferase hexapeptide (six repeats) TQ38_RS14490 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal TQ38_RS14490 PF14602 Hexapeptide repeat of succinyl-transferase TQ38_RS14520 PF00732 GMC oxidoreductase TQ38_RS14520 PF05199 GMC oxidoreductase TQ38_RS14535 PF16193 AAA C-terminal domain TQ38_RS14535 PF12002 MgsA AAA+ ATPase C terminal TQ38_RS14535 PF00004 ATPase family associated with various cellular activities (AAA) TQ38_RS14560 PF00268 Ribonucleotide reductase, small chain TQ38_RS14565 PF13417 Glutathione S-transferase, N-terminal domain TQ38_RS14565 PF00043 Glutathione S-transferase, C-terminal domain TQ38_RS14575 PF03061 Thioesterase superfamily TQ38_RS14585 PF00561 alpha/beta hydrolase fold TQ38_RS14585 PF07021 Methionine biosynthesis protein MetW TQ38_RS14595 PF00561 alpha/beta hydrolase fold TQ38_RS14600 PF00155 Aminotransferase class I and II TQ38_RS14605 PF02153 Prephenate dehydrogenase TQ38_RS14610 PF01841 Transglutaminase-like superfamily TQ38_RS14610 PF08379 Bacterial transglutaminase-like N-terminal region TQ38_RS14630 PF00005 ABC transporter TQ38_RS14635 PF13717 zinc-ribbon domain TQ38_RS14650 PF00664 ABC transporter transmembrane region TQ38_RS14650 PF00005 ABC transporter TQ38_RS14655 PF02563 Polysaccharide biosynthesis/export protein TQ38_RS14660 PF13614 AAA domain TQ38_RS14660 PF13807 G-rich domain on putative tyrosine kinase TQ38_RS14660 PF02706 Chain length determinant protein TQ38_RS14680 PF01943 Polysaccharide biosynthesis protein TQ38_RS14700 PF00534 Glycosyl transferases group 1 TQ38_RS14705 PF00535 Glycosyl transferase family 2 TQ38_RS14735 PF13439 Glycosyltransferase Family 4 TQ38_RS14735 PF00534 Glycosyl transferases group 1 TQ38_RS14740 PF02397 Bacterial sugar transferase TQ38_RS14765 PF00733 Asparagine synthase TQ38_RS14765 PF13537 Glutamine amidotransferase domain TQ38_RS14770 PF05175 Methyltransferase small domain TQ38_RS14790 PF14579 Helix-hairpin-helix motif TQ38_RS14790 PF01336 OB-fold nucleic acid binding domain TQ38_RS14790 PF07733 Bacterial DNA polymerase III alpha NTPase domain TQ38_RS14790 PF02811 PHP domain TQ38_RS14790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TQ38_RS14805 PF00072 Response regulator receiver domain TQ38_RS14805 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS14810 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS14810 PF13755 Sensor N-terminal transmembrane domain TQ38_RS14810 PF13756 Stimulus-sensing domain TQ38_RS14810 PF00672 HAMP domain TQ38_RS14810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS14815 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS14815 PF00593 TonB dependent receptor TQ38_RS14835 PF00171 Aldehyde dehydrogenase family TQ38_RS14865 PF01476 LysM domain TQ38_RS14865 PF03734 L,D-transpeptidase catalytic domain TQ38_RS14870 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TQ38_RS14875 PF03448 MgtE intracellular N domain TQ38_RS14875 PF01769 Divalent cation transporter TQ38_RS14875 PF00571 CBS domain TQ38_RS14885 PF09297 NADH pyrophosphatase zinc ribbon domain TQ38_RS14885 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain TQ38_RS14885 PF00293 NUDIX domain TQ38_RS14890 PF00144 Beta-lactamase TQ38_RS14895 PF00633 Helix-hairpin-helix motif TQ38_RS14895 PF00730 HhH-GPD superfamily base excision DNA repair protein TQ38_RS14895 PF14815 NUDIX domain TQ38_RS14895 PF10576 Iron-sulfur binding domain of endonuclease III TQ38_RS14915 PF02463 RecF/RecN/SMC N terminal domain TQ38_RS14920 PF09278 MerR, DNA binding TQ38_RS14920 PF00376 MerR family regulatory protein TQ38_RS14930 PF01040 UbiA prenyltransferase family TQ38_RS14935 PF04452 RNA methyltransferase TQ38_RS14940 PF04107 Glutamate-cysteine ligase family 2(GCS2) TQ38_RS14970 PF02696 Uncharacterized ACR, YdiU/UPF0061 family TQ38_RS14975 PF00171 Aldehyde dehydrogenase family TQ38_RS14990 PF00892 EamA-like transporter family TQ38_RS15015 PF02678 Pirin TQ38_RS15015 PF17954 Quercetinase C-terminal cupin domain TQ38_RS15020 PF03466 LysR substrate binding domain TQ38_RS15020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS15025 PF01571 Aminomethyltransferase folate-binding domain TQ38_RS15040 PF01016 Ribosomal L27 protein TQ38_RS15045 PF00829 Ribosomal prokaryotic L21 protein TQ38_RS15055 PF02391 MoaE protein TQ38_RS15065 PF06463 Molybdenum Cofactor Synthesis C TQ38_RS15065 PF04055 Radical SAM superfamily TQ38_RS15085 PF00291 Pyridoxal-phosphate dependent enzyme TQ38_RS15085 PF14821 Threonine synthase N terminus TQ38_RS15095 PF00510 Cytochrome c oxidase subunit III TQ38_RS15100 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 TQ38_RS15105 PF01040 UbiA prenyltransferase family TQ38_RS15110 PF00115 Cytochrome C and Quinol oxidase polypeptide I TQ38_RS15115 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TQ38_RS15115 PF02790 Cytochrome C oxidase subunit II, transmembrane domain TQ38_RS15120 PF00156 Phosphoribosyl transferase domain TQ38_RS15125 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ TQ38_RS15130 PF01648 4'-phosphopantetheinyl transferase superfamily TQ38_RS15135 PF10502 Signal peptidase, peptidase S26 TQ38_RS15140 PF01594 AI-2E family transporter TQ38_RS15150 PF03652 Holliday junction resolvase TQ38_RS15170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TQ38_RS15170 PF14824 Sirohaem biosynthesis protein central TQ38_RS15170 PF10414 Sirohaem synthase dimerisation region TQ38_RS15175 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TQ38_RS15175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TQ38_RS15185 PF00206 Lyase TQ38_RS15185 PF14698 Argininosuccinate lyase C-terminal TQ38_RS15190 PF08534 Redoxin TQ38_RS15195 PF01810 LysE type translocator TQ38_RS15205 PF00355 Rieske [2Fe-2S] domain TQ38_RS15205 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TQ38_RS15230 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS15240 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS15245 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain TQ38_RS15245 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain TQ38_RS15250 PF03328 HpcH/HpaI aldolase/citrate lyase family TQ38_RS15255 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS15255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS15255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS15260 PF02515 CoA-transferase family III TQ38_RS15265 PF00205 Thiamine pyrophosphate enzyme, central domain TQ38_RS15265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TQ38_RS15265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TQ38_RS15270 PF00171 Aldehyde dehydrogenase family TQ38_RS15295 PF01638 HxlR-like helix-turn-helix TQ38_RS15335 PF02867 Ribonucleotide reductase, barrel domain TQ38_RS15335 PF03477 ATP cone domain TQ38_RS15335 PF00317 Ribonucleotide reductase, all-alpha domain TQ38_RS15345 PF00890 FAD binding domain TQ38_RS15345 PF02910 Fumarate reductase flavoprotein C-term TQ38_RS15350 PF00005 ABC transporter TQ38_RS15355 PF01638 HxlR-like helix-turn-helix TQ38_RS15360 PF02525 Flavodoxin-like fold TQ38_RS15370 PF01523 Putative modulator of DNA gyrase TQ38_RS15385 PF04333 MlaA lipoprotein TQ38_RS15390 PF00583 Acetyltransferase (GNAT) family TQ38_RS15395 PF00117 Glutamine amidotransferase class-I TQ38_RS15395 PF02540 NAD synthase TQ38_RS15395 PF00958 GMP synthase C terminal domain TQ38_RS15400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS15400 PF01751 Toprim domain TQ38_RS15400 PF00986 DNA gyrase B subunit, carboxyl terminus TQ38_RS15400 PF00204 DNA gyrase B TQ38_RS15405 PF00593 TonB dependent receptor TQ38_RS15405 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS15410 PF01156 Inosine-uridine preferring nucleoside hydrolase TQ38_RS15420 PF00750 tRNA synthetases class I (R) TQ38_RS15420 PF00133 tRNA synthetases class I (I, L, M and V) TQ38_RS15420 PF03485 Arginyl tRNA synthetase N terminal domain TQ38_RS15420 PF05746 DALR anticodon binding domain TQ38_RS15425 PF04055 Radical SAM superfamily TQ38_RS15425 PF01938 TRAM domain TQ38_RS15425 PF00919 Uncharacterized protein family UPF0004 TQ38_RS15440 PF02562 PhoH-like protein TQ38_RS15445 PF02130 Uncharacterized protein family UPF0054 TQ38_RS15450 PF00571 CBS domain TQ38_RS15450 PF03471 Transporter associated domain TQ38_RS15455 PF03466 LysR substrate binding domain TQ38_RS15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS15465 PF00155 Aminotransferase class I and II TQ38_RS15475 PF13649 Methyltransferase domain TQ38_RS15485 PF00202 Aminotransferase class-III TQ38_RS15490 PF00557 Metallopeptidase family M24 TQ38_RS15500 PF02789 Cytosol aminopeptidase family, N-terminal domain TQ38_RS15500 PF00883 Cytosol aminopeptidase family, catalytic domain TQ38_RS15510 PF01118 Semialdehyde dehydrogenase, NAD binding domain TQ38_RS15515 PF00543 Nitrogen regulatory protein P-II TQ38_RS15520 PF00120 Glutamine synthetase, catalytic domain TQ38_RS15520 PF03951 Glutamine synthetase, beta-Grasp domain TQ38_RS15535 PF01740 STAS domain TQ38_RS15535 PF00916 Sulfate permease family TQ38_RS15540 PF04376 Arginine-tRNA-protein transferase, N terminus TQ38_RS15540 PF04377 Arginine-tRNA-protein transferase, C terminus TQ38_RS15545 PF00291 Pyridoxal-phosphate dependent enzyme TQ38_RS15545 PF13291 ACT domain TQ38_RS15550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TQ38_RS15550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TQ38_RS15555 PF01979 Amidohydrolase family TQ38_RS15560 PF00902 Sec-independent protein translocase protein (TatC) TQ38_RS15570 PF02416 mttA/Hcf106 family TQ38_RS15575 PF04079 Segregation and condensation complex subunit ScpB TQ38_RS15580 PF02616 Segregation and condensation protein ScpA TQ38_RS15585 PF00933 Glycosyl hydrolase family 3 N terminal domain TQ38_RS15605 PF00171 Aldehyde dehydrogenase family TQ38_RS15620 PF00149 Calcineurin-like phosphoesterase TQ38_RS15635 PF01790 Prolipoprotein diacylglyceryl transferase TQ38_RS15640 PF08335 GlnD PII-uridylyltransferase TQ38_RS15640 PF01966 HD domain TQ38_RS15655 PF01118 Semialdehyde dehydrogenase, NAD binding domain TQ38_RS15655 PF02774 Semialdehyde dehydrogenase, dimerisation domain TQ38_RS15660 PF00749 tRNA synthetases class I (E and Q), catalytic domain TQ38_RS15665 PF03594 Benzoate membrane transport protein TQ38_RS15680 PF00795 Carbon-nitrogen hydrolase TQ38_RS15680 PF02540 NAD synthase TQ38_RS15685 PF08241 Methyltransferase domain TQ38_RS15690 PF02219 Methylenetetrahydrofolate reductase TQ38_RS15695 PF00809 Pterin binding enzyme TQ38_RS15695 PF02574 Homocysteine S-methyltransferase TQ38_RS15695 PF02965 Vitamin B12 dependent methionine synthase, activation domain TQ38_RS15695 PF02607 B12 binding domain TQ38_RS15695 PF02310 B12 binding domain TQ38_RS15705 PF02310 B12 binding domain TQ38_RS15705 PF02607 B12 binding domain TQ38_RS15705 PF00809 Pterin binding enzyme TQ38_RS15705 PF02965 Vitamin B12 dependent methionine synthase, activation domain TQ38_RS15705 PF02574 Homocysteine S-methyltransferase TQ38_RS15715 PF00570 HRDC domain TQ38_RS15715 PF00271 Helicase conserved C-terminal domain TQ38_RS15715 PF09382 RQC domain TQ38_RS15715 PF00270 DEAD/DEAH box helicase TQ38_RS15715 PF16124 RecQ zinc-binding TQ38_RS15735 PF00694 Aconitase C-terminal domain TQ38_RS15735 PF00330 Aconitase family (aconitate hydratase) TQ38_RS15750 PF17864 RuvB AAA lid domain TQ38_RS15750 PF05491 RuvB C-terminal winged helix domain TQ38_RS15750 PF05496 Holliday junction DNA helicase RuvB P-loop domain TQ38_RS15755 PF07499 RuvA, C-terminal domain TQ38_RS15755 PF01330 RuvA N terminal domain TQ38_RS15765 PF13491 4TM region of DNA translocase FtsK/SpoIIIE TQ38_RS15765 PF01580 FtsK/SpoIIIE family TQ38_RS15765 PF17854 FtsK alpha domain TQ38_RS15765 PF09397 Ftsk gamma domain TQ38_RS15775 PF01168 Alanine racemase, N-terminal domain TQ38_RS15780 PF02887 Pyruvate kinase, alpha/beta domain TQ38_RS15780 PF00224 Pyruvate kinase, barrel domain TQ38_RS15790 PF00893 Small Multidrug Resistance protein TQ38_RS15795 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) TQ38_RS15805 PF01906 Putative heavy-metal-binding TQ38_RS15810 PF01709 Transcriptional regulator TQ38_RS15815 PF02075 Crossover junction endodeoxyribonuclease RuvC TQ38_RS15820 PF02254 TrkA-N domain TQ38_RS15820 PF00999 Sodium/hydrogen exchanger family TQ38_RS15830 PF00326 Prolyl oligopeptidase family TQ38_RS15830 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TQ38_RS15850 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS15850 PF00072 Response regulator receiver domain TQ38_RS15855 PF00672 HAMP domain TQ38_RS15855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS15855 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS15860 PF05872 Bacterial protein of unknown function (DUF853) TQ38_RS15865 PF00117 Glutamine amidotransferase class-I TQ38_RS15865 PF00425 chorismate binding enzyme TQ38_RS15865 PF04715 Anthranilate synthase component I, N terminal region TQ38_RS15870 PF00155 Aminotransferase class I and II TQ38_RS15875 PF00849 RNA pseudouridylate synthase TQ38_RS15905 PF01258 Prokaryotic dksA/traR C4-type zinc finger TQ38_RS15940 PF00072 Response regulator receiver domain TQ38_RS15945 PF00550 Phosphopantetheine attachment site TQ38_RS15950 PF00155 Aminotransferase class I and II TQ38_RS15960 PF03358 NADPH-dependent FMN reductase TQ38_RS15965 PF06233 Usg-like family TQ38_RS15985 PF04860 Phage portal protein TQ38_RS16065 PF06508 Queuosine biosynthesis protein QueC TQ38_RS16075 PF01430 Hsp33 protein TQ38_RS16080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TQ38_RS16080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TQ38_RS16085 PF00202 Aminotransferase class-III TQ38_RS16090 PF00313 'Cold-shock' DNA-binding domain TQ38_RS16100 PF00543 Nitrogen regulatory protein P-II TQ38_RS16105 PF00909 Ammonium Transporter Family TQ38_RS16110 PF00543 Nitrogen regulatory protein P-II TQ38_RS16120 PF00009 Elongation factor Tu GTP binding domain TQ38_RS16120 PF03144 Elongation factor Tu domain 2 TQ38_RS16120 PF16658 Class II release factor RF3, C-terminal domain TQ38_RS16125 PF00270 DEAD/DEAH box helicase TQ38_RS16125 PF00271 Helicase conserved C-terminal domain TQ38_RS16125 PF08494 DEAD/H associated TQ38_RS16130 PF02472 Biopolymer transport protein ExbD/TolR TQ38_RS16135 PF02472 Biopolymer transport protein ExbD/TolR TQ38_RS16140 PF01618 MotA/TolQ/ExbB proton channel family TQ38_RS16155 PF03447 Homoserine dehydrogenase, NAD binding domain TQ38_RS16155 PF00742 Homoserine dehydrogenase TQ38_RS16155 PF01842 ACT domain TQ38_RS16165 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded TQ38_RS16170 PF14572 Phosphoribosyl synthetase-associated domain TQ38_RS16170 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TQ38_RS16180 PF00459 Inositol monophosphatase family TQ38_RS16190 PF01632 Ribosomal protein L35 TQ38_RS16195 PF00453 Ribosomal protein L20 TQ38_RS16205 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TQ38_RS16205 PF01409 tRNA synthetases class II core domain (F) TQ38_RS16210 PF03484 tRNA synthetase B5 domain TQ38_RS16210 PF03147 Ferredoxin-fold anticodon binding domain TQ38_RS16210 PF03483 B3/4 domain TQ38_RS16210 PF01588 Putative tRNA binding domain TQ38_RS16210 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TQ38_RS16215 PF01263 Aldose 1-epimerase TQ38_RS16220 PF00106 short chain dehydrogenase TQ38_RS16225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TQ38_RS16225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TQ38_RS16225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TQ38_RS16225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TQ38_RS16235 PF13614 AAA domain TQ38_RS16240 PF02569 Pantoate-beta-alanine ligase TQ38_RS16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS16250 PF03466 LysR substrate binding domain TQ38_RS16255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TQ38_RS16275 PF02796 Helix-turn-helix domain of resolvase TQ38_RS16275 PF00239 Resolvase, N terminal domain TQ38_RS16285 PF02384 N-6 DNA Methylase TQ38_RS16300 PF18766 SWI2/SNF2 ATPase TQ38_RS16300 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TQ38_RS16300 PF11867 Domain of unknown function (DUF3387) TQ38_RS16330 PF02796 Helix-turn-helix domain of resolvase TQ38_RS16330 PF00239 Resolvase, N terminal domain TQ38_RS16365 PF00156 Phosphoribosyl transferase domain TQ38_RS16370 PF00032 Cytochrome b(C-terminal)/b6/petD TQ38_RS16370 PF00033 Cytochrome b/b6/petB TQ38_RS16370 PF02167 Cytochrome C1 family TQ38_RS16375 PF00033 Cytochrome b/b6/petB TQ38_RS16375 PF00032 Cytochrome b(C-terminal)/b6/petD TQ38_RS16380 PF00355 Rieske [2Fe-2S] domain TQ38_RS16380 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TQ38_RS16385 PF02578 Multi-copper polyphenol oxidoreductase laccase TQ38_RS16390 PF17432 Domain of unknown function (DUF3458_C) ARM repeats TQ38_RS16390 PF01433 Peptidase family M1 domain TQ38_RS16390 PF11940 Domain of unknown function (DUF3458) Ig-like fold TQ38_RS16405 PF01212 Beta-eliminating lyase TQ38_RS16415 PF01943 Polysaccharide biosynthesis protein TQ38_RS16420 PF00483 Nucleotidyl transferase TQ38_RS16445 PF02348 Cytidylyltransferase TQ38_RS16455 PF00834 Ribulose-phosphate 3 epimerase family TQ38_RS16465 PF02142 MGS-like domain TQ38_RS16465 PF01808 AICARFT/IMPCHase bienzyme TQ38_RS16480 PF02780 Transketolase, C-terminal domain TQ38_RS16480 PF02779 Transketolase, pyrimidine binding domain TQ38_RS16480 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TQ38_RS16485 PF12146 Serine aminopeptidase, S33 TQ38_RS16495 PF01979 Amidohydrolase family TQ38_RS16500 PF00854 POT family TQ38_RS16505 PF00216 Bacterial DNA-binding protein TQ38_RS16520 PF01641 SelR domain TQ38_RS16530 PF13732 Domain of unknown function (DUF4162) TQ38_RS16530 PF00005 ABC transporter TQ38_RS16535 PF08331 Domain of unknown function (DUF1730) TQ38_RS16540 PF14759 Reductase C-terminal TQ38_RS16540 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS16545 PF00296 Luciferase-like monooxygenase TQ38_RS16575 PF02824 TGS domain TQ38_RS16575 PF03129 Anticodon binding domain TQ38_RS16575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TQ38_RS16575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TQ38_RS16585 PF01062 Bestrophin, RFP-TM, chloride channel TQ38_RS16595 PF04371 Porphyromonas-type peptidyl-arginine deiminase TQ38_RS16605 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS16605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS16625 PF00199 Catalase TQ38_RS16665 PF03070 TENA/THI-4/PQQC family TQ38_RS16670 PF16655 PhoD-like phosphatase, N-terminal domain TQ38_RS16670 PF09423 PhoD-like phosphatase TQ38_RS16675 PF08713 DNA alkylation repair enzyme TQ38_RS16685 PF00216 Bacterial DNA-binding protein TQ38_RS16695 PF01553 Acyltransferase TQ38_RS16695 PF00501 AMP-binding enzyme TQ38_RS16700 PF17151 Periplasmic sensor domain TQ38_RS16700 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS16705 PF01979 Amidohydrolase family TQ38_RS16710 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS16710 PF00593 TonB dependent receptor TQ38_RS16715 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS16715 PF17874 MalT-like TPR region TQ38_RS16740 PF01425 Amidase TQ38_RS16745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TQ38_RS16745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TQ38_RS16745 PF02785 Biotin carboxylase C-terminal domain TQ38_RS16745 PF00289 Biotin carboxylase, N-terminal domain TQ38_RS16745 PF00364 Biotin-requiring enzyme TQ38_RS16745 PF00289 Biotin carboxylase, N-terminal domain TQ38_RS16745 PF00364 Biotin-requiring enzyme TQ38_RS16745 PF02785 Biotin carboxylase C-terminal domain TQ38_RS16760 PF01402 Ribbon-helix-helix protein, copG family TQ38_RS16760 PF08753 NikR C terminal nickel binding domain TQ38_RS16765 PF00005 ABC transporter TQ38_RS16770 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS16780 PF08753 NikR C terminal nickel binding domain TQ38_RS16780 PF01402 Ribbon-helix-helix protein, copG family TQ38_RS16805 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS16805 PF00593 TonB dependent receptor TQ38_RS16810 PF13181 Tetratricopeptide repeat TQ38_RS16820 PF06751 Ethanolamine ammonia lyase large subunit (EutB) TQ38_RS16825 PF05985 Ethanolamine ammonia-lyase light chain (EutC) TQ38_RS16840 PF01432 Peptidase family M3 TQ38_RS16845 PF01841 Transglutaminase-like superfamily TQ38_RS16845 PF08379 Bacterial transglutaminase-like N-terminal region TQ38_RS16860 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS16860 PF08447 PAS fold TQ38_RS16860 PF00563 EAL domain TQ38_RS16860 PF08448 PAS fold TQ38_RS16865 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS16865 PF08447 PAS fold TQ38_RS16865 PF08448 PAS fold TQ38_RS16865 PF00563 EAL domain TQ38_RS16870 PF13360 PQQ-like domain TQ38_RS16900 PF04773 FecR protein TQ38_RS16900 PF16220 Domain of unknown function (DUF4880) TQ38_RS16915 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS16915 PF00593 TonB dependent receptor TQ38_RS16930 PF00593 TonB dependent receptor TQ38_RS16930 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS16935 PF12852 Cupin TQ38_RS16935 PF12833 Helix-turn-helix domain TQ38_RS16940 PF00106 short chain dehydrogenase TQ38_RS16945 PF00149 Calcineurin-like phosphoesterase TQ38_RS16950 PF00106 short chain dehydrogenase TQ38_RS16955 PF17754 MftR C-terminal domain TQ38_RS16955 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS16960 PF00593 TonB dependent receptor TQ38_RS16960 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS16975 PF09335 SNARE associated Golgi protein TQ38_RS16980 PF03741 Integral membrane protein TerC family TQ38_RS16980 PF03471 Transporter associated domain TQ38_RS16990 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS16990 PF00672 HAMP domain TQ38_RS16995 PF00593 TonB dependent receptor TQ38_RS16995 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS17010 PF01226 Formate/nitrite transporter TQ38_RS17030 PF12951 Passenger-associated-transport-repeat TQ38_RS17050 PF00550 Phosphopantetheine attachment site TQ38_RS17055 PF00109 Beta-ketoacyl synthase, N-terminal domain TQ38_RS17055 PF02801 Beta-ketoacyl synthase, C-terminal domain TQ38_RS17060 PF02797 Chalcone and stilbene synthases, C-terminal domain TQ38_RS17060 PF00195 Chalcone and stilbene synthases, N-terminal domain TQ38_RS17065 PF01494 FAD binding domain TQ38_RS17075 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS17080 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS17085 PF17850 CysA C-terminal regulatory domain TQ38_RS17085 PF00005 ABC transporter TQ38_RS17085 PF12857 TOBE-like domain TQ38_RS17095 PF00593 TonB dependent receptor TQ38_RS17095 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS17100 PF00884 Sulfatase TQ38_RS17120 PF00890 FAD binding domain TQ38_RS17125 PF07859 alpha/beta hydrolase fold TQ38_RS17130 PF01645 Conserved region in glutamate synthase TQ38_RS17135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TQ38_RS17135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TQ38_RS17135 PF00205 Thiamine pyrophosphate enzyme, central domain TQ38_RS17140 PF00005 ABC transporter TQ38_RS17155 PF00593 TonB dependent receptor TQ38_RS17155 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS17175 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS17205 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS17205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS17205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS17210 PF02817 e3 binding domain TQ38_RS17210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TQ38_RS17210 PF00364 Biotin-requiring enzyme TQ38_RS17215 PF02779 Transketolase, pyrimidine binding domain TQ38_RS17215 PF02780 Transketolase, C-terminal domain TQ38_RS17220 PF00676 Dehydrogenase E1 component TQ38_RS17225 PF00355 Rieske [2Fe-2S] domain TQ38_RS17225 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TQ38_RS17235 PF00501 AMP-binding enzyme TQ38_RS17235 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS17255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TQ38_RS17255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TQ38_RS17260 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS17265 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS17265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS17265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS17270 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TQ38_RS17270 PF00355 Rieske [2Fe-2S] domain TQ38_RS17275 PF00355 Rieske [2Fe-2S] domain TQ38_RS17275 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TQ38_RS17300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TQ38_RS17300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TQ38_RS17305 PF01266 FAD dependent oxidoreductase TQ38_RS17305 PF16901 C-terminal domain of alpha-glycerophosphate oxidase TQ38_RS17310 PF03601 Conserved hypothetical protein 698 TQ38_RS17325 PF00665 Integrase core domain TQ38_RS17330 PF00593 TonB dependent receptor TQ38_RS17330 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS17335 PF01055 Glycosyl hydrolases family 31 TQ38_RS17340 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS17345 PF00248 Aldo/keto reductase family TQ38_RS17350 PF00296 Luciferase-like monooxygenase TQ38_RS17355 PF13426 PAS domain TQ38_RS17355 PF00072 Response regulator receiver domain TQ38_RS17355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS17365 PF00672 HAMP domain TQ38_RS17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS17365 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS17365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TQ38_RS17365 PF00072 Response regulator receiver domain TQ38_RS17365 PF01627 Hpt domain TQ38_RS17370 PF00072 Response regulator receiver domain TQ38_RS17370 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS17375 PF00873 AcrB/AcrD/AcrF family TQ38_RS17405 PF00593 TonB dependent receptor TQ38_RS17405 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS17410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TQ38_RS17420 PF01266 FAD dependent oxidoreductase TQ38_RS17430 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS17435 PF12911 N-terminal TM domain of oligopeptide transport permease C TQ38_RS17435 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS17440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TQ38_RS17440 PF00005 ABC transporter TQ38_RS17450 PF01593 Flavin containing amine oxidoreductase TQ38_RS17455 PF01266 FAD dependent oxidoreductase TQ38_RS17460 PF00171 Aldehyde dehydrogenase family TQ38_RS17470 PF00171 Aldehyde dehydrogenase family TQ38_RS17475 PF00180 Isocitrate/isopropylmalate dehydrogenase TQ38_RS17480 PF00202 Aminotransferase class-III TQ38_RS17485 PF01037 Lrp/AsnC ligand binding domain TQ38_RS17490 PF07687 Peptidase dimerisation domain TQ38_RS17490 PF01546 Peptidase family M20/M25/M40 TQ38_RS17495 PF05275 Copper resistance protein B precursor (CopB) TQ38_RS17500 PF07732 Multicopper oxidase TQ38_RS17500 PF00394 Multicopper oxidase TQ38_RS17500 PF07731 Multicopper oxidase TQ38_RS17505 PF04542 Sigma-70 region 2 TQ38_RS17505 PF08281 Sigma-70, region 4 TQ38_RS17525 PF05425 Copper resistance protein D TQ38_RS17570 PF00128 Alpha amylase, catalytic domain TQ38_RS17570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TQ38_RS17575 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TQ38_RS17575 PF11941 Domain of unknown function (DUF3459) TQ38_RS17575 PF00128 Alpha amylase, catalytic domain TQ38_RS17580 PF00128 Alpha amylase, catalytic domain TQ38_RS17585 PF02867 Ribonucleotide reductase, barrel domain TQ38_RS17585 PF03477 ATP cone domain TQ38_RS17585 PF00317 Ribonucleotide reductase, all-alpha domain TQ38_RS17595 PF02321 Outer membrane efflux protein TQ38_RS17600 PF00873 AcrB/AcrD/AcrF family TQ38_RS17605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TQ38_RS17605 PF00529 HlyD membrane-fusion protein of T1SS TQ38_RS17620 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS17620 PF00672 HAMP domain TQ38_RS17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS17620 PF16527 Two-component sensor protein CpxA, periplasmic domain TQ38_RS17625 PF00072 Response regulator receiver domain TQ38_RS17625 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS17630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TQ38_RS17635 PF00005 ABC transporter TQ38_RS17635 PF02687 FtsX-like permease family TQ38_RS17635 PF12704 MacB-like periplasmic core domain TQ38_RS17640 PF02321 Outer membrane efflux protein TQ38_RS17645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TQ38_RS17645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TQ38_RS17660 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS17690 PF13298 DNA polymerase Ligase (LigD) TQ38_RS17690 PF01068 ATP dependent DNA ligase domain TQ38_RS17690 PF04679 ATP dependent DNA ligase C terminal region TQ38_RS17695 PF02735 Ku70/Ku80 beta-barrel domain TQ38_RS17710 PF13493 Domain of unknown function (DUF4118) TQ38_RS17710 PF08447 PAS fold TQ38_RS17710 PF00989 PAS fold TQ38_RS17710 PF13426 PAS domain TQ38_RS17710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS17710 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS17720 PF13426 PAS domain TQ38_RS17720 PF08447 PAS fold TQ38_RS17720 PF13493 Domain of unknown function (DUF4118) TQ38_RS17720 PF00989 PAS fold TQ38_RS17720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS17720 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS17725 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS17725 PF00072 Response regulator receiver domain TQ38_RS17735 PF03009 Glycerophosphoryl diester phosphodiesterase family TQ38_RS17745 PF00480 ROK family TQ38_RS17755 PF13817 IS66 C-terminal element TQ38_RS17755 PF13005 zinc-finger binding domain of transposase IS66 TQ38_RS17755 PF03050 Transposase IS66 family TQ38_RS17755 PF13007 Transposase C of IS166 homeodomain TQ38_RS17760 PF05717 IS66 Orf2 like protein TQ38_RS17770 PF00480 ROK family TQ38_RS17775 PF00501 AMP-binding enzyme TQ38_RS17775 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS17780 PF06434 Aconitate hydratase 2 N-terminus TQ38_RS17780 PF00330 Aconitase family (aconitate hydratase) TQ38_RS17780 PF11791 Aconitate B N-terminal domain TQ38_RS17785 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS17790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS17790 PF03466 LysR substrate binding domain TQ38_RS17800 PF00732 GMC oxidoreductase TQ38_RS17800 PF05199 GMC oxidoreductase TQ38_RS17805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TQ38_RS17805 PF00034 Cytochrome c TQ38_RS17820 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS17825 PF00480 ROK family TQ38_RS17825 PF01047 MarR family TQ38_RS17830 PF00593 TonB dependent receptor TQ38_RS17830 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS17850 PF02837 Glycosyl hydrolases family 2, sugar binding domain TQ38_RS17850 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TQ38_RS17850 PF00703 Glycosyl hydrolases family 2 TQ38_RS17850 PF02929 Beta galactosidase small chain TQ38_RS17850 PF16353 Domain of unknown function(DUF4981) TQ38_RS17855 PF16859 Tetracyclin repressor-like, C-terminal domain TQ38_RS17855 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS17870 PF01229 Glycosyl hydrolases family 39 TQ38_RS17905 PF10417 C-terminal domain of 1-Cys peroxiredoxin TQ38_RS17905 PF00578 AhpC/TSA family TQ38_RS17910 PF01327 Polypeptide deformylase TQ38_RS17915 PF00296 Luciferase-like monooxygenase TQ38_RS17925 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS17925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS17925 PF08028 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS17930 PF00664 ABC transporter transmembrane region TQ38_RS17930 PF00005 ABC transporter TQ38_RS17935 PF00005 ABC transporter TQ38_RS17935 PF00664 ABC transporter transmembrane region TQ38_RS17940 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS17940 PF00593 TonB dependent receptor TQ38_RS17950 PF00158 Sigma-54 interaction domain TQ38_RS17955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TQ38_RS17955 PF00005 ABC transporter TQ38_RS17960 PF12911 N-terminal TM domain of oligopeptide transport permease C TQ38_RS17960 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS17965 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS17970 PF00296 Luciferase-like monooxygenase TQ38_RS17985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TQ38_RS17990 PF00296 Luciferase-like monooxygenase TQ38_RS18010 PF00881 Nitroreductase family TQ38_RS18015 PF00296 Luciferase-like monooxygenase TQ38_RS18025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TQ38_RS18035 PF00664 ABC transporter transmembrane region TQ38_RS18035 PF00005 ABC transporter TQ38_RS18035 PF08021 Siderophore-interacting FAD-binding domain TQ38_RS18035 PF04954 Siderophore-interacting protein TQ38_RS18045 PF00296 Luciferase-like monooxygenase TQ38_RS18055 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS18060 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS18065 PF00005 ABC transporter TQ38_RS18075 PF00296 Luciferase-like monooxygenase TQ38_RS18080 PF00296 Luciferase-like monooxygenase TQ38_RS18095 PF00158 Sigma-54 interaction domain TQ38_RS18100 PF00593 TonB dependent receptor TQ38_RS18100 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS18100 PF07660 Secretin and TonB N terminus short domain TQ38_RS18105 PF00296 Luciferase-like monooxygenase TQ38_RS18115 PF01546 Peptidase family M20/M25/M40 TQ38_RS18120 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS18120 PF00593 TonB dependent receptor TQ38_RS18135 PF00101 Ribulose bisphosphate carboxylase, small chain TQ38_RS18140 PF04679 ATP dependent DNA ligase C terminal region TQ38_RS18140 PF13298 DNA polymerase Ligase (LigD) TQ38_RS18140 PF01068 ATP dependent DNA ligase domain TQ38_RS18160 PF00583 Acetyltransferase (GNAT) family TQ38_RS18165 PF00216 Bacterial DNA-binding protein TQ38_RS18185 PF01336 OB-fold nucleic acid binding domain TQ38_RS18185 PF02811 PHP domain TQ38_RS18185 PF14579 Helix-hairpin-helix motif TQ38_RS18185 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TQ38_RS18185 PF07733 Bacterial DNA polymerase III alpha NTPase domain TQ38_RS18210 PF00106 short chain dehydrogenase TQ38_RS18220 PF01370 NAD dependent epimerase/dehydratase family TQ38_RS18230 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS18240 PF00072 Response regulator receiver domain TQ38_RS18240 PF02954 Bacterial regulatory protein, Fis family TQ38_RS18240 PF00158 Sigma-54 interaction domain TQ38_RS18245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS18270 PF04134 Protein of unknown function, DUF393 TQ38_RS18295 PF13361 UvrD-like helicase C-terminal domain TQ38_RS18295 PF00570 HRDC domain TQ38_RS18310 PF05443 ROS/MUCR transcriptional regulator protein TQ38_RS18325 PF00589 Phage integrase family TQ38_RS18325 PF02899 Phage integrase, N-terminal SAM-like domain TQ38_RS18335 PF00144 Beta-lactamase TQ38_RS18335 PF11954 Domain of unknown function (DUF3471) TQ38_RS18350 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS18350 PF00593 TonB dependent receptor TQ38_RS18355 PF07729 FCD domain TQ38_RS18355 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS18370 PF00072 Response regulator receiver domain TQ38_RS18380 PF05532 CsbD-like TQ38_RS18385 PF00072 Response regulator receiver domain TQ38_RS18385 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS18390 PF08447 PAS fold TQ38_RS18390 PF00989 PAS fold TQ38_RS18390 PF13426 PAS domain TQ38_RS18390 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS18390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS18390 PF13493 Domain of unknown function (DUF4118) TQ38_RS18400 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS18400 PF07660 Secretin and TonB N terminus short domain TQ38_RS18400 PF00593 TonB dependent receptor TQ38_RS18405 PF00593 TonB dependent receptor TQ38_RS18405 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS18425 PF00375 Sodium:dicarboxylate symporter family TQ38_RS18435 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS18435 PF00501 AMP-binding enzyme TQ38_RS18450 PF00083 Sugar (and other) transporter TQ38_RS18465 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS18465 PF00593 TonB dependent receptor TQ38_RS18470 PF01546 Peptidase family M20/M25/M40 TQ38_RS18470 PF07687 Peptidase dimerisation domain TQ38_RS18490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TQ38_RS18490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TQ38_RS18495 PF03825 Nucleoside H+ symporter TQ38_RS18510 PF09278 MerR, DNA binding TQ38_RS18510 PF00376 MerR family regulatory protein TQ38_RS18515 PF01545 Cation efflux family TQ38_RS18515 PF16916 Dimerisation domain of Zinc Transporter TQ38_RS18520 PF01925 Sulfite exporter TauE/SafE TQ38_RS18525 PF03466 LysR substrate binding domain TQ38_RS18525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS18530 PF08241 Methyltransferase domain TQ38_RS18535 PF01925 Sulfite exporter TauE/SafE TQ38_RS18550 PF01695 IstB-like ATP binding protein TQ38_RS18570 PF02899 Phage integrase, N-terminal SAM-like domain TQ38_RS18570 PF00589 Phage integrase family TQ38_RS18575 PF01443 Viral (Superfamily 1) RNA helicase TQ38_RS18575 PF17841 BID domain of Bartonella effector protein (Bep) TQ38_RS18575 PF03389 MobA/MobL family TQ38_RS18585 PF06412 Conjugal transfer protein TraD TQ38_RS18620 PF18818 Metallopeptidase superfamily domain TQ38_RS18620 PF08401 Domain of unknown function (DUF1738) TQ38_RS18620 PF13362 Toprim domain TQ38_RS18625 PF05930 Prophage CP4-57 regulatory protein (AlpA) TQ38_RS18630 PF00589 Phage integrase family TQ38_RS18630 PF13356 Arm DNA-binding domain TQ38_RS18680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TQ38_RS18680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TQ38_RS18860 PF01557 Fumarylacetoacetate (FAA) hydrolase family TQ38_RS18865 PF07883 Cupin domain TQ38_RS18870 PF00795 Carbon-nitrogen hydrolase TQ38_RS18875 PF01613 Flavin reductase like domain TQ38_RS18890 PF04324 BFD-like [2Fe-2S] binding domain TQ38_RS18890 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS18900 PF01266 FAD dependent oxidoreductase TQ38_RS18905 PF00701 Dihydrodipicolinate synthetase family TQ38_RS18920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS18920 PF03466 LysR substrate binding domain TQ38_RS18925 PF01915 Glycosyl hydrolase family 3 C-terminal domain TQ38_RS18925 PF00933 Glycosyl hydrolase family 3 N terminal domain TQ38_RS18925 PF14310 Fibronectin type III-like domain TQ38_RS18925 PF07691 PA14 domain TQ38_RS18960 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS18975 PF00248 Aldo/keto reductase family TQ38_RS18980 PF07690 Major Facilitator Superfamily TQ38_RS19000 PF00890 FAD binding domain TQ38_RS19000 PF14537 Cytochrome c3 TQ38_RS19005 PF00890 FAD binding domain TQ38_RS19010 PF05199 GMC oxidoreductase TQ38_RS19010 PF00732 GMC oxidoreductase TQ38_RS19020 PF00501 AMP-binding enzyme TQ38_RS19020 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS19035 PF16295 Tetracyclin repressor-like, C-terminal domain TQ38_RS19035 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS19055 PF02515 CoA-transferase family III TQ38_RS19070 PF01261 Xylose isomerase-like TIM barrel TQ38_RS19075 PF00596 Class II Aldolase and Adducin N-terminal domain TQ38_RS19085 PF06379 L-rhamnose-proton symport protein (RhaT) TQ38_RS19090 PF00455 DeoR C terminal sensor domain TQ38_RS19090 PF08220 DeoR-like helix-turn-helix domain TQ38_RS19110 PF13378 Enolase C-terminal domain-like TQ38_RS19110 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TQ38_RS19120 PF05336 L-rhamnose mutarotase TQ38_RS19135 PF02515 CoA-transferase family III TQ38_RS19145 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS19155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TQ38_RS19155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TQ38_RS19160 PF00485 Phosphoribulokinase / Uridine kinase family TQ38_RS19165 PF01070 FMN-dependent dehydrogenase TQ38_RS19175 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TQ38_RS19175 PF16355 Domain of unknown function (DUF4982) TQ38_RS19175 PF02837 Glycosyl hydrolases family 2, sugar binding domain TQ38_RS19175 PF00703 Glycosyl hydrolases family 2 TQ38_RS19175 PF13287 Fn3 associated TQ38_RS19180 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain TQ38_RS19180 PF08531 Alpha-L-rhamnosidase N-terminal domain TQ38_RS19180 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain TQ38_RS19180 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain TQ38_RS19195 PF01557 Fumarylacetoacetate (FAA) hydrolase family TQ38_RS19200 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) TQ38_RS19200 PF12708 Pectate lyase superfamily protein TQ38_RS19200 PF13229 Right handed beta helix region TQ38_RS19205 PF04909 Amidohydrolase TQ38_RS19210 PF00248 Aldo/keto reductase family TQ38_RS19215 PF08946 Osmosensory transporter coiled coil TQ38_RS19215 PF00083 Sugar (and other) transporter TQ38_RS19220 PF07690 Major Facilitator Superfamily TQ38_RS19225 PF13840 ACT domain TQ38_RS19225 PF00696 Amino acid kinase family TQ38_RS19230 PF05721 Phytanoyl-CoA dioxygenase (PhyH) TQ38_RS19235 PF06339 Ectoine synthase TQ38_RS19240 PF00202 Aminotransferase class-III TQ38_RS19245 PF00583 Acetyltransferase (GNAT) family TQ38_RS19250 PF01047 MarR family TQ38_RS19255 PF03979 Sigma-70 factor, region 1.1 TQ38_RS19255 PF04546 Sigma-70, non-essential region TQ38_RS19255 PF04542 Sigma-70 region 2 TQ38_RS19255 PF04539 Sigma-70 region 3 TQ38_RS19255 PF00140 Sigma-70 factor, region 1.2 TQ38_RS19255 PF04545 Sigma-70, region 4 TQ38_RS19260 PF00313 'Cold-shock' DNA-binding domain TQ38_RS19270 PF12833 Helix-turn-helix domain TQ38_RS19270 PF14525 AraC-binding-like domain TQ38_RS19275 PF01494 FAD binding domain TQ38_RS19290 PF02837 Glycosyl hydrolases family 2, sugar binding domain TQ38_RS19295 PF00232 Glycosyl hydrolase family 1 TQ38_RS19300 PF07859 alpha/beta hydrolase fold TQ38_RS19310 PF00593 TonB dependent receptor TQ38_RS19310 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS19315 PF01557 Fumarylacetoacetate (FAA) hydrolase family TQ38_RS19330 PF01494 FAD binding domain TQ38_RS19340 PF03466 LysR substrate binding domain TQ38_RS19340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS19345 PF05443 ROS/MUCR transcriptional regulator protein TQ38_RS19350 PF01594 AI-2E family transporter TQ38_RS19365 PF01541 GIY-YIG catalytic domain TQ38_RS19365 PF08459 UvrC Helix-hairpin-helix N-terminal TQ38_RS19365 PF02151 UvrB/uvrC motif TQ38_RS19370 PF17757 UvrB interaction domain TQ38_RS19370 PF02559 CarD-like/TRCF domain TQ38_RS19370 PF00270 DEAD/DEAH box helicase TQ38_RS19370 PF03461 TRCF domain TQ38_RS19370 PF00271 Helicase conserved C-terminal domain TQ38_RS19380 PF13823 Alcohol dehydrogenase GroES-associated TQ38_RS19380 PF00107 Zinc-binding dehydrogenase TQ38_RS19380 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS19385 PF00106 short chain dehydrogenase TQ38_RS19435 PF02668 Taurine catabolism dioxygenase TauD, TfdA family TQ38_RS19445 PF03466 LysR substrate binding domain TQ38_RS19445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS19450 PF12411 Choline sulfatase enzyme C terminal TQ38_RS19450 PF00884 Sulfatase TQ38_RS19470 PF00296 Luciferase-like monooxygenase TQ38_RS19475 PF00043 Glutathione S-transferase, C-terminal domain TQ38_RS19475 PF02798 Glutathione S-transferase, N-terminal domain TQ38_RS19480 PF00375 Sodium:dicarboxylate symporter family TQ38_RS19500 PF00593 TonB dependent receptor TQ38_RS19500 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS19505 PF00296 Luciferase-like monooxygenase TQ38_RS19510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TQ38_RS19515 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS19520 PF00528 Binding-protein-dependent transport system inner membrane component TQ38_RS19520 PF12911 N-terminal TM domain of oligopeptide transport permease C TQ38_RS19525 PF00005 ABC transporter TQ38_RS19525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TQ38_RS19530 PF00296 Luciferase-like monooxygenase TQ38_RS19540 PF07660 Secretin and TonB N terminus short domain TQ38_RS19540 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS19540 PF00593 TonB dependent receptor TQ38_RS19585 PF01695 IstB-like ATP binding protein TQ38_RS19595 PF12728 Helix-turn-helix domain TQ38_RS19595 PF02661 Fic/DOC family TQ38_RS19600 PF00872 Transposase, Mutator family TQ38_RS19605 PF00596 Class II Aldolase and Adducin N-terminal domain TQ38_RS19610 PF00034 Cytochrome c TQ38_RS19615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TQ38_RS19615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TQ38_RS19615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TQ38_RS19615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TQ38_RS19620 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TQ38_RS19630 PF00355 Rieske [2Fe-2S] domain TQ38_RS19645 PF00596 Class II Aldolase and Adducin N-terminal domain TQ38_RS19650 PF00043 Glutathione S-transferase, C-terminal domain TQ38_RS19650 PF02798 Glutathione S-transferase, N-terminal domain TQ38_RS19660 PF01738 Dienelactone hydrolase family TQ38_RS19665 PF03466 LysR substrate binding domain TQ38_RS19665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS19680 PF13404 AsnC-type helix-turn-helix domain TQ38_RS19680 PF01037 Lrp/AsnC ligand binding domain TQ38_RS19685 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TQ38_RS19685 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TQ38_RS19690 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TQ38_RS19690 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TQ38_RS19695 PF00551 Formyl transferase TQ38_RS19705 PF01571 Aminomethyltransferase folate-binding domain TQ38_RS19705 PF08669 Glycine cleavage T-protein C-terminal barrel domain TQ38_RS19705 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS19705 PF17806 Sarcosine oxidase A3 domain TQ38_RS19710 PF04267 Sarcosine oxidase, delta subunit family TQ38_RS19715 PF01266 FAD dependent oxidoreductase TQ38_RS19720 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS19735 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS19735 PF00593 TonB dependent receptor TQ38_RS19740 PF00593 TonB dependent receptor TQ38_RS19740 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS19750 PF07690 Major Facilitator Superfamily TQ38_RS19755 PF02913 FAD linked oxidases, C-terminal domain TQ38_RS19755 PF01565 FAD binding domain TQ38_RS19780 PF01695 IstB-like ATP binding protein TQ38_RS19805 PF01979 Amidohydrolase family TQ38_RS19810 PF07690 Major Facilitator Superfamily TQ38_RS19830 PF01070 FMN-dependent dehydrogenase TQ38_RS19835 PF01381 Helix-turn-helix TQ38_RS19835 PF07883 Cupin domain TQ38_RS19865 PF01156 Inosine-uridine preferring nucleoside hydrolase TQ38_RS19870 PF12832 MFS_1 like family TQ38_RS19895 PF03328 HpcH/HpaI aldolase/citrate lyase family TQ38_RS19900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS19900 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS19900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS19905 PF03466 LysR substrate binding domain TQ38_RS19905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS19910 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS19910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TQ38_RS19915 PF02817 e3 binding domain TQ38_RS19915 PF00364 Biotin-requiring enzyme TQ38_RS19915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TQ38_RS19920 PF02780 Transketolase, C-terminal domain TQ38_RS19920 PF02779 Transketolase, pyrimidine binding domain TQ38_RS19925 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal TQ38_RS19925 PF00676 Dehydrogenase E1 component TQ38_RS19930 PF01037 Lrp/AsnC ligand binding domain TQ38_RS19930 PF13404 AsnC-type helix-turn-helix domain TQ38_RS19955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TQ38_RS19955 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS19960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TQ38_RS19960 PF00364 Biotin-requiring enzyme TQ38_RS19960 PF02817 e3 binding domain TQ38_RS19965 PF02780 Transketolase, C-terminal domain TQ38_RS19965 PF02779 Transketolase, pyrimidine binding domain TQ38_RS19970 PF00676 Dehydrogenase E1 component TQ38_RS19970 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal TQ38_RS19980 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TQ38_RS19980 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TQ38_RS19985 PF13404 AsnC-type helix-turn-helix domain TQ38_RS19985 PF01037 Lrp/AsnC ligand binding domain TQ38_RS20010 PF05378 Hydantoinase/oxoprolinase N-terminal region TQ38_RS20010 PF01968 Hydantoinase/oxoprolinase TQ38_RS20015 PF00842 Alanine racemase, C-terminal domain TQ38_RS20015 PF01168 Alanine racemase, N-terminal domain TQ38_RS20020 PF00593 TonB dependent receptor TQ38_RS20020 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS20025 PF07690 Major Facilitator Superfamily TQ38_RS20030 PF00815 Histidinol dehydrogenase TQ38_RS20045 PF01063 Amino-transferase class IV TQ38_RS20065 PF12833 Helix-turn-helix domain TQ38_RS20080 PF05199 GMC oxidoreductase TQ38_RS20080 PF00732 GMC oxidoreductase TQ38_RS20085 PF00144 Beta-lactamase TQ38_RS20090 PF07690 Major Facilitator Superfamily TQ38_RS20100 PF07364 Metallopeptidase family M81 TQ38_RS20100 PF07171 MlrC C-terminus TQ38_RS20105 PF01266 FAD dependent oxidoreductase TQ38_RS20110 PF00171 Aldehyde dehydrogenase family TQ38_RS20115 PF00144 Beta-lactamase TQ38_RS20115 PF07930 D-aminopeptidase, domain B TQ38_RS20130 PF00491 Arginase family TQ38_RS20150 PF00202 Aminotransferase class-III TQ38_RS20165 PF12852 Cupin TQ38_RS20165 PF12833 Helix-turn-helix domain TQ38_RS20170 PF07690 Major Facilitator Superfamily TQ38_RS20175 PF02371 Transposase IS116/IS110/IS902 family TQ38_RS20175 PF01548 Transposase TQ38_RS20195 PF12728 Helix-turn-helix domain TQ38_RS20195 PF02661 Fic/DOC family TQ38_RS20200 PF06441 Epoxide hydrolase N terminus TQ38_RS20205 PF00999 Sodium/hydrogen exchanger family TQ38_RS20210 PF00210 Ferritin-like domain TQ38_RS20215 PF06628 Catalase-related immune-responsive TQ38_RS20215 PF00199 Catalase TQ38_RS20230 PF00107 Zinc-binding dehydrogenase TQ38_RS20230 PF08659 KR domain TQ38_RS20230 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS20230 PF14765 Polyketide synthase dehydratase TQ38_RS20230 PF00698 Acyl transferase domain TQ38_RS20230 PF16197 Ketoacyl-synthetase C-terminal extension TQ38_RS20230 PF00550 Phosphopantetheine attachment site TQ38_RS20230 PF02801 Beta-ketoacyl synthase, C-terminal domain TQ38_RS20230 PF00109 Beta-ketoacyl synthase, N-terminal domain TQ38_RS20245 PF12848 ABC transporter TQ38_RS20245 PF16326 ABC transporter C-terminal domain TQ38_RS20245 PF00005 ABC transporter TQ38_RS20250 PF07690 Major Facilitator Superfamily TQ38_RS20260 PF00561 alpha/beta hydrolase fold TQ38_RS20270 PF07690 Major Facilitator Superfamily TQ38_RS20275 PF06441 Epoxide hydrolase N terminus TQ38_RS20285 PF02566 OsmC-like protein TQ38_RS20290 PF06441 Epoxide hydrolase N terminus TQ38_RS20295 PF02683 Cytochrome C biogenesis protein transmembrane region TQ38_RS20295 PF17991 Thioredoxin like C-terminal domain TQ38_RS20295 PF00578 AhpC/TSA family TQ38_RS20315 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS20320 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TQ38_RS20330 PF01548 Transposase TQ38_RS20330 PF02371 Transposase IS116/IS110/IS902 family TQ38_RS20335 PF01022 Bacterial regulatory protein, arsR family TQ38_RS20365 PF00872 Transposase, Mutator family TQ38_RS20460 PF07690 Major Facilitator Superfamily TQ38_RS20475 PF01126 Heme oxygenase TQ38_RS20490 PF00593 TonB dependent receptor TQ38_RS20490 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS20500 PF04542 Sigma-70 region 2 TQ38_RS20500 PF12680 SnoaL-like domain TQ38_RS20500 PF08281 Sigma-70, region 4 TQ38_RS20510 PF01695 IstB-like ATP binding protein TQ38_RS20520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TQ38_RS20520 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS20530 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS20530 PF02909 Tetracyclin repressor-like, C-terminal domain TQ38_RS20535 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS20535 PF00593 TonB dependent receptor TQ38_RS20540 PF00171 Aldehyde dehydrogenase family TQ38_RS20545 PF13360 PQQ-like domain TQ38_RS20545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TQ38_RS20550 PF00067 Cytochrome P450 TQ38_RS20565 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS20565 PF00501 AMP-binding enzyme TQ38_RS20615 PF00375 Sodium:dicarboxylate symporter family TQ38_RS20625 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS20625 PF00593 TonB dependent receptor TQ38_RS20660 PF00884 Sulfatase TQ38_RS20665 PF00171 Aldehyde dehydrogenase family TQ38_RS20670 PF00920 Dehydratase family TQ38_RS20690 PF00083 Sugar (and other) transporter TQ38_RS20700 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS20705 PF03648 Glycosyl hydrolase family 67 N-terminus TQ38_RS20705 PF07488 Glycosyl hydrolase family 67 middle domain TQ38_RS20705 PF07477 Glycosyl hydrolase family 67 C-terminus TQ38_RS20710 PF14310 Fibronectin type III-like domain TQ38_RS20710 PF00933 Glycosyl hydrolase family 3 N terminal domain TQ38_RS20710 PF01915 Glycosyl hydrolase family 3 C-terminal domain TQ38_RS20715 PF13378 Enolase C-terminal domain-like TQ38_RS20715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TQ38_RS20720 PF07690 Major Facilitator Superfamily TQ38_RS20725 PF02614 Glucuronate isomerase TQ38_RS20730 PF01232 Mannitol dehydrogenase Rossmann domain TQ38_RS20730 PF08125 Mannitol dehydrogenase C-terminal domain TQ38_RS20750 PF04616 Glycosyl hydrolases family 43 TQ38_RS20795 PF01593 Flavin containing amine oxidoreductase TQ38_RS20825 PF00999 Sodium/hydrogen exchanger family TQ38_RS20825 PF02254 TrkA-N domain TQ38_RS20830 PF00593 TonB dependent receptor TQ38_RS20830 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS20840 PF00593 TonB dependent receptor TQ38_RS20840 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS20845 PF00005 ABC transporter TQ38_RS20860 PF00561 alpha/beta hydrolase fold TQ38_RS20865 PF07690 Major Facilitator Superfamily TQ38_RS20870 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS20875 PF00331 Glycosyl hydrolase family 10 TQ38_RS20875 PF00404 Dockerin type I domain TQ38_RS20875 PF00756 Putative esterase TQ38_RS20875 PF03422 Carbohydrate binding module (family 6) TQ38_RS20890 PF01965 DJ-1/PfpI family TQ38_RS20905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS20905 PF03466 LysR substrate binding domain TQ38_RS20925 PF00183 Hsp90 protein TQ38_RS20930 PF00850 Histone deacetylase domain TQ38_RS20940 PF11799 impB/mucB/samB family C-terminal domain TQ38_RS20940 PF11798 IMS family HHH motif TQ38_RS20940 PF00817 impB/mucB/samB family TQ38_RS20955 PF07687 Peptidase dimerisation domain TQ38_RS20955 PF01546 Peptidase family M20/M25/M40 TQ38_RS20960 PF00375 Sodium:dicarboxylate symporter family TQ38_RS20970 PF00501 AMP-binding enzyme TQ38_RS20970 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS20985 PF00083 Sugar (and other) transporter TQ38_RS21000 PF01590 GAF domain TQ38_RS21000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS21000 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS21000 PF08446 PAS fold TQ38_RS21000 PF00360 Phytochrome region TQ38_RS21015 PF12796 Ankyrin repeats (3 copies) TQ38_RS21025 PF00106 short chain dehydrogenase TQ38_RS21030 PF13823 Alcohol dehydrogenase GroES-associated TQ38_RS21030 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS21030 PF00107 Zinc-binding dehydrogenase TQ38_RS21065 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS21080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TQ38_RS21080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TQ38_RS21085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TQ38_RS21085 PF13378 Enolase C-terminal domain-like TQ38_RS21090 PF07690 Major Facilitator Superfamily TQ38_RS21095 PF01229 Glycosyl hydrolases family 39 TQ38_RS21105 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS21105 PF07729 FCD domain TQ38_RS21110 PF07995 Glucose / Sorbosone dehydrogenase TQ38_RS21115 PF00072 Response regulator receiver domain TQ38_RS21115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS21115 PF13426 PAS domain TQ38_RS21135 PF00701 Dihydrodipicolinate synthetase family TQ38_RS21140 PF05544 Proline racemase TQ38_RS21145 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region TQ38_RS21145 PF00326 Prolyl oligopeptidase family TQ38_RS21150 PF16353 Domain of unknown function(DUF4981) TQ38_RS21150 PF02837 Glycosyl hydrolases family 2, sugar binding domain TQ38_RS21150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TQ38_RS21150 PF00703 Glycosyl hydrolases family 2 TQ38_RS21150 PF02929 Beta galactosidase small chain TQ38_RS21155 PF00593 TonB dependent receptor TQ38_RS21155 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS21160 PF01544 CorA-like Mg2+ transporter protein TQ38_RS21180 PF00593 TonB dependent receptor TQ38_RS21180 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS21195 PF16220 Domain of unknown function (DUF4880) TQ38_RS21195 PF04773 FecR protein TQ38_RS21230 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS21230 PF07660 Secretin and TonB N terminus short domain TQ38_RS21230 PF00593 TonB dependent receptor TQ38_RS21260 PF06224 Winged helix DNA-binding domain TQ38_RS21295 PF01095 Pectinesterase TQ38_RS21315 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TQ38_RS21330 PF10503 Esterase PHB depolymerase TQ38_RS21345 PF18011 C-terminal domain found in long catalases TQ38_RS21345 PF06628 Catalase-related immune-responsive TQ38_RS21345 PF00199 Catalase TQ38_RS21350 PF13439 Glycosyltransferase Family 4 TQ38_RS21350 PF00534 Glycosyl transferases group 1 TQ38_RS21390 PF01258 Prokaryotic dksA/traR C4-type zinc finger TQ38_RS21415 PF00781 Diacylglycerol kinase catalytic domain TQ38_RS21415 PF02142 MGS-like domain TQ38_RS21420 PF00459 Inositol monophosphatase family TQ38_RS21430 PF01590 GAF domain TQ38_RS21430 PF00563 EAL domain TQ38_RS21430 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS21430 PF00989 PAS fold TQ38_RS21475 PF03109 ABC1 family TQ38_RS21495 PF02371 Transposase IS116/IS110/IS902 family TQ38_RS21495 PF01548 Transposase TQ38_RS21500 PF05443 ROS/MUCR transcriptional regulator protein TQ38_RS21530 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS21530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS21530 PF13188 PAS domain TQ38_RS21530 PF08448 PAS fold TQ38_RS21530 PF00072 Response regulator receiver domain TQ38_RS21555 PF00216 Bacterial DNA-binding protein TQ38_RS21580 PF01548 Transposase TQ38_RS21580 PF02371 Transposase IS116/IS110/IS902 family TQ38_RS21600 PF00665 Integrase core domain TQ38_RS21600 PF13936 Helix-turn-helix domain TQ38_RS21615 PF00216 Bacterial DNA-binding protein TQ38_RS21635 PF05717 IS66 Orf2 like protein TQ38_RS21645 PF00665 Integrase core domain TQ38_RS21645 PF13936 Helix-turn-helix domain TQ38_RS21655 PF01613 Flavin reductase like domain TQ38_RS21680 PF03992 Antibiotic biosynthesis monooxygenase TQ38_RS21695 PF00862 Sucrose synthase TQ38_RS21695 PF00534 Glycosyl transferases group 1 TQ38_RS21700 PF00128 Alpha amylase, catalytic domain TQ38_RS21710 PF13439 Glycosyltransferase Family 4 TQ38_RS21710 PF00534 Glycosyl transferases group 1 TQ38_RS21725 PF02371 Transposase IS116/IS110/IS902 family TQ38_RS21725 PF01548 Transposase TQ38_RS21745 PF02899 Phage integrase, N-terminal SAM-like domain TQ38_RS21745 PF00589 Phage integrase family TQ38_RS21750 PF03389 MobA/MobL family TQ38_RS21750 PF01443 Viral (Superfamily 1) RNA helicase TQ38_RS21750 PF17841 BID domain of Bartonella effector protein (Bep) TQ38_RS21800 PF08401 Domain of unknown function (DUF1738) TQ38_RS21800 PF18818 Metallopeptidase superfamily domain TQ38_RS21805 PF05930 Prophage CP4-57 regulatory protein (AlpA) TQ38_RS21810 PF00589 Phage integrase family TQ38_RS21810 PF13356 Arm DNA-binding domain TQ38_RS21845 PF00563 EAL domain TQ38_RS21845 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS21845 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS21845 PF13188 PAS domain TQ38_RS21865 PF00106 short chain dehydrogenase TQ38_RS21870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS21870 PF03466 LysR substrate binding domain TQ38_RS21875 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS21875 PF00593 TonB dependent receptor TQ38_RS21885 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS21885 PF00593 TonB dependent receptor TQ38_RS21915 PF04955 HupE / UreJ protein TQ38_RS21920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS21920 PF00672 HAMP domain TQ38_RS21920 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS21925 PF00072 Response regulator receiver domain TQ38_RS21925 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS21930 PF02321 Outer membrane efflux protein TQ38_RS21935 PF00873 AcrB/AcrD/AcrF family TQ38_RS21955 PF08281 Sigma-70, region 4 TQ38_RS21955 PF04542 Sigma-70 region 2 TQ38_RS21960 PF04773 FecR protein TQ38_RS21960 PF16220 Domain of unknown function (DUF4880) TQ38_RS21965 PF00593 TonB dependent receptor TQ38_RS21965 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS21975 PF05506 Domain of unknown function (DUF756) TQ38_RS21975 PF04185 Phosphoesterase family TQ38_RS21995 PF07683 Cobalamin synthesis protein cobW C-terminal domain TQ38_RS21995 PF02492 CobW/HypB/UreG, nucleotide-binding domain TQ38_RS22000 PF02514 CobN/Magnesium Chelatase TQ38_RS22005 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TQ38_RS22010 PF00881 Nitroreductase family TQ38_RS22020 PF01032 FecCD transport family TQ38_RS22025 PF00005 ABC transporter TQ38_RS22045 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS22045 PF00593 TonB dependent receptor TQ38_RS22050 PF00355 Rieske [2Fe-2S] domain TQ38_RS22050 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TQ38_RS22060 PF00912 Transglycosylase TQ38_RS22060 PF00905 Penicillin binding protein transpeptidase domain TQ38_RS22070 PF00384 Molybdopterin oxidoreductase TQ38_RS22075 PF02583 Metal-sensitive transcriptional repressor TQ38_RS22080 PF01545 Cation efflux family TQ38_RS22105 PF13614 AAA domain TQ38_RS22115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS22115 PF03466 LysR substrate binding domain TQ38_RS22120 PF00873 AcrB/AcrD/AcrF family TQ38_RS22130 PF02321 Outer membrane efflux protein TQ38_RS22165 PF03466 LysR substrate binding domain TQ38_RS22165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS22170 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS22170 PF00107 Zinc-binding dehydrogenase TQ38_RS22175 PF00756 Putative esterase TQ38_RS22220 PF00989 PAS fold TQ38_RS22220 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS22220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS22235 PF00263 Bacterial type II and III secretion system protein TQ38_RS22235 PF03958 Bacterial type II/III secretion system short domain TQ38_RS22245 PF00437 Type II/IV secretion system protein TQ38_RS22285 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS22285 PF00072 Response regulator receiver domain TQ38_RS22290 PF00563 EAL domain TQ38_RS22290 PF01590 GAF domain TQ38_RS22290 PF00360 Phytochrome region TQ38_RS22290 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS22295 PF00106 short chain dehydrogenase TQ38_RS22300 PF03466 LysR substrate binding domain TQ38_RS22300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS22320 PF01425 Amidase TQ38_RS22325 PF00296 Luciferase-like monooxygenase TQ38_RS22330 PF00933 Glycosyl hydrolase family 3 N terminal domain TQ38_RS22330 PF14310 Fibronectin type III-like domain TQ38_RS22330 PF01915 Glycosyl hydrolase family 3 C-terminal domain TQ38_RS22335 PF02954 Bacterial regulatory protein, Fis family TQ38_RS22335 PF00158 Sigma-54 interaction domain TQ38_RS22335 PF00072 Response regulator receiver domain TQ38_RS22340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS22340 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS22345 PF00375 Sodium:dicarboxylate symporter family TQ38_RS22360 PF01425 Amidase TQ38_RS22365 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS22370 PF00732 GMC oxidoreductase TQ38_RS22370 PF05199 GMC oxidoreductase TQ38_RS22385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TQ38_RS22385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TQ38_RS22395 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS22395 PF00593 TonB dependent receptor TQ38_RS22400 PF06719 AraC-type transcriptional regulator N-terminus TQ38_RS22400 PF12833 Helix-turn-helix domain TQ38_RS22405 PF00106 short chain dehydrogenase TQ38_RS22415 PF00294 pfkB family carbohydrate kinase TQ38_RS22420 PF02668 Taurine catabolism dioxygenase TauD, TfdA family TQ38_RS22430 PF01979 Amidohydrolase family TQ38_RS22435 PF00857 Isochorismatase family TQ38_RS22440 PF00296 Luciferase-like monooxygenase TQ38_RS22450 PF03069 Acetamidase/Formamidase family TQ38_RS22455 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TQ38_RS22455 PF00355 Rieske [2Fe-2S] domain TQ38_RS22465 PF03069 Acetamidase/Formamidase family TQ38_RS22470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS22470 PF13426 PAS domain TQ38_RS22470 PF00072 Response regulator receiver domain TQ38_RS22475 PF07690 Major Facilitator Superfamily TQ38_RS22490 PF01425 Amidase TQ38_RS22495 PF01979 Amidohydrolase family TQ38_RS22500 PF02668 Taurine catabolism dioxygenase TauD, TfdA family TQ38_RS22505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TQ38_RS22510 PF07729 FCD domain TQ38_RS22510 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS22525 PF00171 Aldehyde dehydrogenase family TQ38_RS22575 PF00593 TonB dependent receptor TQ38_RS22575 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS22580 PF01126 Heme oxygenase TQ38_RS22585 PF00563 EAL domain TQ38_RS22585 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS22585 PF13188 PAS domain TQ38_RS22585 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS22590 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS22590 PF00107 Zinc-binding dehydrogenase TQ38_RS22595 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS22595 PF00072 Response regulator receiver domain TQ38_RS22600 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS22600 PF00989 PAS fold TQ38_RS22600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS22610 PF09924 Uncharacterised conserved protein (DUF2156) TQ38_RS22610 PF03706 Lysylphosphatidylglycerol synthase TM region TQ38_RS22625 PF01522 Polysaccharide deacetylase TQ38_RS22630 PF08450 SMP-30/Gluconolactonase/LRE-like region TQ38_RS22635 PF00920 Dehydratase family TQ38_RS22640 PF01263 Aldose 1-epimerase TQ38_RS22645 PF07690 Major Facilitator Superfamily TQ38_RS22650 PF07729 FCD domain TQ38_RS22650 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS22655 PF00171 Aldehyde dehydrogenase family TQ38_RS22665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TQ38_RS22670 PF06964 Alpha-L-arabinofuranosidase C-terminal domain TQ38_RS22675 PF04616 Glycosyl hydrolases family 43 TQ38_RS22680 PF04616 Glycosyl hydrolases family 43 TQ38_RS22680 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain TQ38_RS22730 PF01322 Cytochrome C' TQ38_RS22745 PF16859 Tetracyclin repressor-like, C-terminal domain TQ38_RS22745 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS22750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS22750 PF03466 LysR substrate binding domain TQ38_RS22760 PF13419 Haloacid dehalogenase-like hydrolase TQ38_RS22770 PF00593 TonB dependent receptor TQ38_RS22770 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS22775 PF05506 Domain of unknown function (DUF756) TQ38_RS22775 PF04185 Phosphoesterase family TQ38_RS22790 PF07702 UTRA domain TQ38_RS22790 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS22795 PF01928 CYTH domain TQ38_RS22800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TQ38_RS22800 PF01568 Molydopterin dinucleotide binding domain TQ38_RS22800 PF00384 Molybdopterin oxidoreductase TQ38_RS22805 PF08376 Nitrate and nitrite sensing TQ38_RS22805 PF03861 ANTAR domain TQ38_RS22810 PF00005 ABC transporter TQ38_RS22815 PF07690 Major Facilitator Superfamily TQ38_RS22825 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS22825 PF04324 BFD-like [2Fe-2S] binding domain TQ38_RS22825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TQ38_RS22825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TQ38_RS22825 PF18267 Rubredoxin NAD+ reductase C-terminal domain TQ38_RS22830 PF00355 Rieske [2Fe-2S] domain TQ38_RS22835 PF10414 Sirohaem synthase dimerisation region TQ38_RS22835 PF14824 Sirohaem biosynthesis protein central TQ38_RS22835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TQ38_RS22840 PF00994 Probable molybdopterin binding domain TQ38_RS22840 PF03453 MoeA N-terminal region (domain I and II) TQ38_RS22840 PF03454 MoeA C-terminal region (domain IV) TQ38_RS22845 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS22850 PF00703 Glycosyl hydrolases family 2 TQ38_RS22850 PF02837 Glycosyl hydrolases family 2, sugar binding domain TQ38_RS22850 PF02929 Beta galactosidase small chain TQ38_RS22850 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TQ38_RS22850 PF16353 Domain of unknown function(DUF4981) TQ38_RS22870 PF07690 Major Facilitator Superfamily TQ38_RS22875 PF04244 Deoxyribodipyrimidine photo-lyase-related protein TQ38_RS22880 PF06745 KaiC TQ38_RS22885 PF13426 PAS domain TQ38_RS22885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS22885 PF00072 Response regulator receiver domain TQ38_RS22895 PF01925 Sulfite exporter TauE/SafE TQ38_RS22900 PF00593 TonB dependent receptor TQ38_RS22900 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS22905 PF01053 Cys/Met metabolism PLP-dependent enzyme TQ38_RS22910 PF01037 Lrp/AsnC ligand binding domain TQ38_RS22915 PF03737 Aldolase/RraA TQ38_RS22925 PF00795 Carbon-nitrogen hydrolase TQ38_RS22935 PF07690 Major Facilitator Superfamily TQ38_RS22940 PF01979 Amidohydrolase family TQ38_RS22950 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS22950 PF07729 FCD domain TQ38_RS22965 PF02913 FAD linked oxidases, C-terminal domain TQ38_RS22965 PF01565 FAD binding domain TQ38_RS22980 PF00135 Carboxylesterase family TQ38_RS22985 PF00067 Cytochrome P450 TQ38_RS22995 PF02515 CoA-transferase family III TQ38_RS23005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS23005 PF03466 LysR substrate binding domain TQ38_RS23010 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS23025 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS23025 PF00593 TonB dependent receptor TQ38_RS23040 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS23040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS23040 PF00072 Response regulator receiver domain TQ38_RS23040 PF13188 PAS domain TQ38_RS23040 PF08448 PAS fold TQ38_RS23050 PF07690 Major Facilitator Superfamily TQ38_RS23060 PF13378 Enolase C-terminal domain-like TQ38_RS23060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TQ38_RS23065 PF00701 Dihydrodipicolinate synthetase family TQ38_RS23080 PF05035 2-keto-3-deoxy-galactonokinase TQ38_RS23090 PF00171 Aldehyde dehydrogenase family TQ38_RS23100 PF00593 TonB dependent receptor TQ38_RS23100 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS23110 PF01425 Amidase TQ38_RS23115 PF02423 Ornithine cyclodeaminase/mu-crystallin family TQ38_RS23125 PF13382 Adenine deaminase C-terminal domain TQ38_RS23125 PF13382 Adenine deaminase C-terminal domain TQ38_RS23125 PF01979 Amidohydrolase family TQ38_RS23125 PF01979 Amidohydrolase family TQ38_RS23130 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS23130 PF00155 Aminotransferase class I and II TQ38_RS23135 PF00593 TonB dependent receptor TQ38_RS23135 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS23140 PF00593 TonB dependent receptor TQ38_RS23140 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS23145 PF04226 Transglycosylase associated protein TQ38_RS23155 PF02570 Precorrin-8X methylmutase TQ38_RS23160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TQ38_RS23165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TQ38_RS23170 PF02571 Precorrin-6x reductase CbiJ/CobK TQ38_RS23175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TQ38_RS23185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TQ38_RS23190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TQ38_RS23215 PF03466 LysR substrate binding domain TQ38_RS23215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS23220 PF00296 Luciferase-like monooxygenase TQ38_RS23230 PF00756 Putative esterase TQ38_RS23230 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase TQ38_RS23235 PF07859 alpha/beta hydrolase fold TQ38_RS23235 PF13472 GDSL-like Lipase/Acylhydrolase family TQ38_RS23240 PF14310 Fibronectin type III-like domain TQ38_RS23240 PF00933 Glycosyl hydrolase family 3 N terminal domain TQ38_RS23240 PF01915 Glycosyl hydrolase family 3 C-terminal domain TQ38_RS23240 PF07691 PA14 domain TQ38_RS23255 PF00034 Cytochrome c TQ38_RS23280 PF13847 Methyltransferase domain TQ38_RS23285 PF00296 Luciferase-like monooxygenase TQ38_RS23315 PF12697 Alpha/beta hydrolase family TQ38_RS23340 PF00296 Luciferase-like monooxygenase TQ38_RS23345 PF00561 alpha/beta hydrolase fold TQ38_RS23350 PF01494 FAD binding domain TQ38_RS23365 PF00296 Luciferase-like monooxygenase TQ38_RS23385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TQ38_RS23385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TQ38_RS23390 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS23390 PF00593 TonB dependent receptor TQ38_RS23400 PF00857 Isochorismatase family TQ38_RS23405 PF00694 Aconitase C-terminal domain TQ38_RS23410 PF00330 Aconitase family (aconitate hydratase) TQ38_RS23415 PF00561 alpha/beta hydrolase fold TQ38_RS23415 PF08386 TAP-like protein TQ38_RS23420 PF12697 Alpha/beta hydrolase family TQ38_RS23435 PF12697 Alpha/beta hydrolase family TQ38_RS23440 PF01593 Flavin containing amine oxidoreductase TQ38_RS23450 PF01494 FAD binding domain TQ38_RS23455 PF00171 Aldehyde dehydrogenase family TQ38_RS23460 PF09339 IclR helix-turn-helix domain TQ38_RS23460 PF01614 Bacterial transcriptional regulator TQ38_RS23465 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS23465 PF00107 Zinc-binding dehydrogenase TQ38_RS23475 PF02538 Hydantoinase B/oxoprolinase TQ38_RS23480 PF01968 Hydantoinase/oxoprolinase TQ38_RS23480 PF05378 Hydantoinase/oxoprolinase N-terminal region TQ38_RS23485 PF00171 Aldehyde dehydrogenase family TQ38_RS23490 PF01494 FAD binding domain TQ38_RS23500 PF02515 CoA-transferase family III TQ38_RS23505 PF00682 HMGL-like TQ38_RS23510 PF00694 Aconitase C-terminal domain TQ38_RS23515 PF00330 Aconitase family (aconitate hydratase) TQ38_RS23520 PF00107 Zinc-binding dehydrogenase TQ38_RS23520 PF16884 N-terminal domain of oxidoreductase TQ38_RS23530 PF00890 FAD binding domain TQ38_RS23530 PF04205 FMN-binding domain TQ38_RS23585 PF07690 Major Facilitator Superfamily TQ38_RS23595 PF07690 Major Facilitator Superfamily TQ38_RS23605 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS23605 PF00107 Zinc-binding dehydrogenase TQ38_RS23620 PF00857 Isochorismatase family TQ38_RS23625 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS23625 PF00593 TonB dependent receptor TQ38_RS23655 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS23655 PF00593 TonB dependent receptor TQ38_RS23660 PF03315 Serine dehydratase beta chain TQ38_RS23660 PF03313 Serine dehydratase alpha chain TQ38_RS23685 PF03466 LysR substrate binding domain TQ38_RS23685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS23690 PF07690 Major Facilitator Superfamily TQ38_RS23695 PF00248 Aldo/keto reductase family TQ38_RS23710 PF01915 Glycosyl hydrolase family 3 C-terminal domain TQ38_RS23710 PF14310 Fibronectin type III-like domain TQ38_RS23710 PF00933 Glycosyl hydrolase family 3 N terminal domain TQ38_RS23715 PF00999 Sodium/hydrogen exchanger family TQ38_RS23720 PF14310 Fibronectin type III-like domain TQ38_RS23720 PF01915 Glycosyl hydrolase family 3 C-terminal domain TQ38_RS23720 PF00933 Glycosyl hydrolase family 3 N terminal domain TQ38_RS23725 PF04820 Tryptophan halogenase TQ38_RS23730 PF00593 TonB dependent receptor TQ38_RS23730 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS23735 PF07690 Major Facilitator Superfamily TQ38_RS23740 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS23745 PF00083 Sugar (and other) transporter TQ38_RS23745 PF08946 Osmosensory transporter coiled coil TQ38_RS23750 PF08281 Sigma-70, region 4 TQ38_RS23750 PF04542 Sigma-70 region 2 TQ38_RS23760 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS23760 PF07660 Secretin and TonB N terminus short domain TQ38_RS23760 PF00593 TonB dependent receptor TQ38_RS23765 PF12697 Alpha/beta hydrolase family TQ38_RS23770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS23770 PF03466 LysR substrate binding domain TQ38_RS23775 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TQ38_RS23775 PF00326 Prolyl oligopeptidase family TQ38_RS23785 PF13195 Protein of unknown function (DUF4011) TQ38_RS23785 PF13195 Protein of unknown function (DUF4011) TQ38_RS23785 PF13087 AAA domain TQ38_RS23785 PF13087 AAA domain TQ38_RS23785 PF13086 AAA domain TQ38_RS23785 PF13086 AAA domain TQ38_RS23790 PF02342 TerD domain TQ38_RS23795 PF02342 TerD domain TQ38_RS23805 PF02342 TerD domain TQ38_RS23810 PF02342 TerD domain TQ38_RS23855 PF05726 Pirin C-terminal cupin domain TQ38_RS23855 PF02678 Pirin TQ38_RS23885 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS23885 PF00072 Response regulator receiver domain TQ38_RS23890 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS23890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS23890 PF00672 HAMP domain TQ38_RS23915 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS23915 PF07729 FCD domain TQ38_RS23935 PF07690 Major Facilitator Superfamily TQ38_RS23940 PF05426 Alginate lyase TQ38_RS23940 PF07940 Heparinase II/III-like protein TQ38_RS23945 PF14592 Chondroitinase B TQ38_RS23960 PF13350 Tyrosine phosphatase family TQ38_RS23985 PF00326 Prolyl oligopeptidase family TQ38_RS23985 PF07676 WD40-like Beta Propeller Repeat TQ38_RS23990 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS23990 PF07729 FCD domain TQ38_RS24000 PF02615 Malate/L-lactate dehydrogenase TQ38_RS24005 PF04616 Glycosyl hydrolases family 43 TQ38_RS24020 PF00701 Dihydrodipicolinate synthetase family TQ38_RS24025 PF05544 Proline racemase TQ38_RS24030 PF16499 Alpha galactosidase A TQ38_RS24030 PF17801 Alpha galactosidase C-terminal beta sandwich domain TQ38_RS24035 PF13520 Amino acid permease TQ38_RS24040 PF07729 FCD domain TQ38_RS24040 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS24050 PF00557 Metallopeptidase family M24 TQ38_RS24050 PF01321 Creatinase/Prolidase N-terminal domain TQ38_RS24055 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain TQ38_RS24060 PF08501 Shikimate dehydrogenase substrate binding domain TQ38_RS24065 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS24070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TQ38_RS24070 PF00381 PTS HPr component phosphorylation site TQ38_RS24070 PF02896 PEP-utilising enzyme, TIM barrel domain TQ38_RS24070 PF00391 PEP-utilising enzyme, mobile domain TQ38_RS24070 PF05524 PEP-utilising enzyme, N-terminal TQ38_RS24075 PF00294 pfkB family carbohydrate kinase TQ38_RS24080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TQ38_RS24085 PF04966 Carbohydrate-selective porin, OprB family TQ38_RS24090 PF08666 SAF domain TQ38_RS24090 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus TQ38_RS24095 PF02614 Glucuronate isomerase TQ38_RS24100 PF08125 Mannitol dehydrogenase C-terminal domain TQ38_RS24100 PF01232 Mannitol dehydrogenase Rossmann domain TQ38_RS24105 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS24110 PF04616 Glycosyl hydrolases family 43 TQ38_RS24110 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain TQ38_RS24115 PF00593 TonB dependent receptor TQ38_RS24115 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS24125 PF03466 LysR substrate binding domain TQ38_RS24125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS24130 PF00593 TonB dependent receptor TQ38_RS24130 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS24135 PF01156 Inosine-uridine preferring nucleoside hydrolase TQ38_RS24140 PF00860 Permease family TQ38_RS24145 PF00962 Adenosine/AMP deaminase TQ38_RS24170 PF00135 Carboxylesterase family TQ38_RS24185 PF04962 KduI/IolB family TQ38_RS24190 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS24200 PF07690 Major Facilitator Superfamily TQ38_RS24205 PF04616 Glycosyl hydrolases family 43 TQ38_RS24220 PF07690 Major Facilitator Superfamily TQ38_RS24230 PF03466 LysR substrate binding domain TQ38_RS24230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS24235 PF00701 Dihydrodipicolinate synthetase family TQ38_RS24240 PF02321 Outer membrane efflux protein TQ38_RS24245 PF00873 AcrB/AcrD/AcrF family TQ38_RS24250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TQ38_RS24280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS24280 PF13426 PAS domain TQ38_RS24280 PF00072 Response regulator receiver domain TQ38_RS24285 PF05532 CsbD-like TQ38_RS24290 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain TQ38_RS24290 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain TQ38_RS24295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS24295 PF03466 LysR substrate binding domain TQ38_RS24300 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS24305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TQ38_RS24315 PF00296 Luciferase-like monooxygenase TQ38_RS24335 PF00296 Luciferase-like monooxygenase TQ38_RS24340 PF12697 Alpha/beta hydrolase family TQ38_RS24345 PF03466 LysR substrate binding domain TQ38_RS24345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS24350 PF12697 Alpha/beta hydrolase family TQ38_RS24355 PF07690 Major Facilitator Superfamily TQ38_RS24365 PF00355 Rieske [2Fe-2S] domain TQ38_RS24365 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TQ38_RS24370 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS24370 PF00593 TonB dependent receptor TQ38_RS24380 PF00106 short chain dehydrogenase TQ38_RS24385 PF16884 N-terminal domain of oxidoreductase TQ38_RS24385 PF00107 Zinc-binding dehydrogenase TQ38_RS24390 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TQ38_RS24390 PF00355 Rieske [2Fe-2S] domain TQ38_RS24395 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS24395 PF03472 Autoinducer binding domain TQ38_RS24400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TQ38_RS24400 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS24405 PF03466 LysR substrate binding domain TQ38_RS24405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS24410 PF00561 alpha/beta hydrolase fold TQ38_RS24435 PF00328 Histidine phosphatase superfamily (branch 2) TQ38_RS24445 PF12833 Helix-turn-helix domain TQ38_RS24450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS24450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS24450 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS24455 PF00501 AMP-binding enzyme TQ38_RS24455 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS24465 PF00067 Cytochrome P450 TQ38_RS24470 PF00171 Aldehyde dehydrogenase family TQ38_RS24485 PF00107 Zinc-binding dehydrogenase TQ38_RS24485 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS24495 PF00106 short chain dehydrogenase TQ38_RS24500 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS24500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS24500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS24510 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS24515 PF02803 Thiolase, C-terminal domain TQ38_RS24515 PF00108 Thiolase, N-terminal domain TQ38_RS24520 PF03060 Nitronate monooxygenase TQ38_RS24525 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS24530 PF03466 LysR substrate binding domain TQ38_RS24530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS24535 PF00296 Luciferase-like monooxygenase TQ38_RS24545 PF00296 Luciferase-like monooxygenase TQ38_RS24555 PF00296 Luciferase-like monooxygenase TQ38_RS24570 PF00561 alpha/beta hydrolase fold TQ38_RS24580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS24580 PF03466 LysR substrate binding domain TQ38_RS24590 PF00296 Luciferase-like monooxygenase TQ38_RS24600 PF01047 MarR family TQ38_RS24610 PF00175 Oxidoreductase NAD-binding domain TQ38_RS24610 PF00970 Oxidoreductase FAD-binding domain TQ38_RS24610 PF00042 Globin TQ38_RS24630 PF00583 Acetyltransferase (GNAT) family TQ38_RS24650 PF16347 Domain of unknown function (DUF4976) TQ38_RS24650 PF00884 Sulfatase TQ38_RS24655 PF07694 5TMR of 5TMR-LYT TQ38_RS24655 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS24660 PF00248 Aldo/keto reductase family TQ38_RS24665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS24665 PF03466 LysR substrate binding domain TQ38_RS24675 PF07995 Glucose / Sorbosone dehydrogenase TQ38_RS24680 PF00593 TonB dependent receptor TQ38_RS24680 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS24685 PF00480 ROK family TQ38_RS24690 PF07969 Amidohydrolase family TQ38_RS24695 PF01979 Amidohydrolase family TQ38_RS24700 PF02163 Peptidase family M50 TQ38_RS24705 PF00106 short chain dehydrogenase TQ38_RS24710 PF02515 CoA-transferase family III TQ38_RS24715 PF00106 short chain dehydrogenase TQ38_RS24720 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term TQ38_RS24720 PF12833 Helix-turn-helix domain TQ38_RS24725 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS24725 PF00593 TonB dependent receptor TQ38_RS24730 PF13577 SnoaL-like domain TQ38_RS24745 PF00326 Prolyl oligopeptidase family TQ38_RS24775 PF01266 FAD dependent oxidoreductase TQ38_RS24780 PF03928 Haem-degrading TQ38_RS24790 PF00230 Major intrinsic protein TQ38_RS24795 PF03960 ArsC family TQ38_RS24815 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS24815 PF00593 TonB dependent receptor TQ38_RS24820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TQ38_RS24820 PF13360 PQQ-like domain TQ38_RS24830 PF13977 BetI-type transcriptional repressor, C-terminal TQ38_RS24830 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS24835 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS24835 PF00593 TonB dependent receptor TQ38_RS24865 PF00557 Metallopeptidase family M24 TQ38_RS24870 PF00676 Dehydrogenase E1 component TQ38_RS24875 PF02779 Transketolase, pyrimidine binding domain TQ38_RS24875 PF02780 Transketolase, C-terminal domain TQ38_RS24880 PF02817 e3 binding domain TQ38_RS24880 PF00364 Biotin-requiring enzyme TQ38_RS24880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TQ38_RS24885 PF01011 PQQ enzyme repeat TQ38_RS24890 PF13091 PLD-like domain TQ38_RS24890 PF13396 Phospholipase_D-nuclease N-terminal TQ38_RS24900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS24900 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS24900 PF00672 HAMP domain TQ38_RS24905 PF00072 Response regulator receiver domain TQ38_RS24905 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS24920 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TQ38_RS24920 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TQ38_RS24945 PF00970 Oxidoreductase FAD-binding domain TQ38_RS24945 PF00175 Oxidoreductase NAD-binding domain TQ38_RS24970 PF00534 Glycosyl transferases group 1 TQ38_RS24970 PF13439 Glycosyltransferase Family 4 TQ38_RS24985 PF00534 Glycosyl transferases group 1 TQ38_RS24985 PF13439 Glycosyltransferase Family 4 TQ38_RS24995 PF00999 Sodium/hydrogen exchanger family TQ38_RS25005 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS25010 PF00248 Aldo/keto reductase family TQ38_RS25015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TQ38_RS25020 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase TQ38_RS25025 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit TQ38_RS25030 PF04909 Amidohydrolase TQ38_RS25040 PF03466 LysR substrate binding domain TQ38_RS25040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS25045 PF03737 Aldolase/RraA TQ38_RS25050 PF04303 PrpF protein TQ38_RS25055 PF04909 Amidohydrolase TQ38_RS25060 PF05506 Domain of unknown function (DUF756) TQ38_RS25060 PF04185 Phosphoesterase family TQ38_RS25065 PF05443 ROS/MUCR transcriptional regulator protein TQ38_RS25075 PF05726 Pirin C-terminal cupin domain TQ38_RS25075 PF02678 Pirin TQ38_RS25080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS25080 PF03466 LysR substrate binding domain TQ38_RS25085 PF02678 Pirin TQ38_RS25085 PF17954 Quercetinase C-terminal cupin domain TQ38_RS25100 PF07690 Major Facilitator Superfamily TQ38_RS25110 PF00313 'Cold-shock' DNA-binding domain TQ38_RS25125 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS25125 PF07702 UTRA domain TQ38_RS25130 PF13580 SIS domain TQ38_RS25140 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS25140 PF00593 TonB dependent receptor TQ38_RS25145 PF03702 Anhydro-N-acetylmuramic acid kinase TQ38_RS25155 PF01380 SIS domain TQ38_RS25160 PF01979 Amidohydrolase family TQ38_RS25170 PF01565 FAD binding domain TQ38_RS25170 PF09330 D-lactate dehydrogenase, membrane binding TQ38_RS25175 PF01869 BadF/BadG/BcrA/BcrD ATPase family TQ38_RS25180 PF01204 Trehalase TQ38_RS25190 PF03976 Polyphosphate kinase 2 (PPK2) TQ38_RS25205 PF01370 NAD dependent epimerase/dehydratase family TQ38_RS25215 PF03883 Peroxide stress protein YaaA TQ38_RS25220 PF01544 CorA-like Mg2+ transporter protein TQ38_RS25225 PF01384 Phosphate transporter family TQ38_RS25230 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS25230 PF00593 TonB dependent receptor TQ38_RS25235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TQ38_RS25250 PF07690 Major Facilitator Superfamily TQ38_RS25255 PF13533 Biotin-lipoyl like TQ38_RS25260 PF00593 TonB dependent receptor TQ38_RS25260 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS25265 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS25265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS25265 PF00672 HAMP domain TQ38_RS25270 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS25270 PF00072 Response regulator receiver domain TQ38_RS25285 PF04966 Carbohydrate-selective porin, OprB family TQ38_RS25290 PF13360 PQQ-like domain TQ38_RS25290 PF01011 PQQ enzyme repeat TQ38_RS25295 PF00593 TonB dependent receptor TQ38_RS25295 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS25300 PF16655 PhoD-like phosphatase, N-terminal domain TQ38_RS25300 PF09423 PhoD-like phosphatase TQ38_RS25325 PF00872 Transposase, Mutator family TQ38_RS25345 PF02397 Bacterial sugar transferase TQ38_RS25360 PF00698 Acyl transferase domain TQ38_RS25360 PF00668 Condensation domain TQ38_RS25360 PF00550 Phosphopantetheine attachment site TQ38_RS25360 PF02801 Beta-ketoacyl synthase, C-terminal domain TQ38_RS25360 PF16197 Ketoacyl-synthetase C-terminal extension TQ38_RS25360 PF00109 Beta-ketoacyl synthase, N-terminal domain TQ38_RS25365 PF00668 Condensation domain TQ38_RS25365 PF00550 Phosphopantetheine attachment site TQ38_RS25365 PF00501 AMP-binding enzyme TQ38_RS25365 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS25380 PF00534 Glycosyl transferases group 1 TQ38_RS25380 PF13439 Glycosyltransferase Family 4 TQ38_RS25385 PF00534 Glycosyl transferases group 1 TQ38_RS25385 PF13439 Glycosyltransferase Family 4 TQ38_RS25390 PF00534 Glycosyl transferases group 1 TQ38_RS25425 PF03808 Glycosyl transferase WecB/TagA/CpsF family TQ38_RS25430 PF10531 SLBB domain TQ38_RS25430 PF02563 Polysaccharide biosynthesis/export protein TQ38_RS25445 PF13614 AAA domain TQ38_RS25450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TQ38_RS25460 PF01925 Sulfite exporter TauE/SafE TQ38_RS25525 PF00037 4Fe-4S binding domain TQ38_RS25525 PF11953 Domain of unknown function (DUF3470) TQ38_RS25555 PF07969 Amidohydrolase family TQ38_RS25560 PF00328 Histidine phosphatase superfamily (branch 2) TQ38_RS25590 PF04333 MlaA lipoprotein TQ38_RS25595 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS25595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS25595 PF07689 KaiB domain TQ38_RS25605 PF00072 Response regulator receiver domain TQ38_RS25605 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS25610 PF00072 Response regulator receiver domain TQ38_RS25610 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS25645 PF00916 Sulfate permease family TQ38_RS25645 PF01740 STAS domain TQ38_RS25660 PF01638 HxlR-like helix-turn-helix TQ38_RS25665 PF00557 Metallopeptidase family M24 TQ38_RS25675 PF03009 Glycerophosphoryl diester phosphodiesterase family TQ38_RS25695 PF07995 Glucose / Sorbosone dehydrogenase TQ38_RS25705 PF00872 Transposase, Mutator family TQ38_RS25710 PF07729 FCD domain TQ38_RS25710 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS25715 PF02515 CoA-transferase family III TQ38_RS25720 PF00682 HMGL-like TQ38_RS25725 PF00857 Isochorismatase family TQ38_RS25740 PF01081 KDPG and KHG aldolase TQ38_RS25745 PF05035 2-keto-3-deoxy-galactonokinase TQ38_RS25750 PF00474 Sodium:solute symporter family TQ38_RS25760 PF01943 Polysaccharide biosynthesis protein TQ38_RS25775 PF00072 Response regulator receiver domain TQ38_RS25775 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS25830 PF00011 Hsp20/alpha crystallin family TQ38_RS25835 PF02735 Ku70/Ku80 beta-barrel domain TQ38_RS25900 PF00534 Glycosyl transferases group 1 TQ38_RS25900 PF13439 Glycosyltransferase Family 4 TQ38_RS25905 PF18011 C-terminal domain found in long catalases TQ38_RS25905 PF00199 Catalase TQ38_RS25905 PF06628 Catalase-related immune-responsive TQ38_RS25925 PF00270 DEAD/DEAH box helicase TQ38_RS25925 PF00271 Helicase conserved C-terminal domain TQ38_RS25925 PF03461 TRCF domain TQ38_RS25925 PF02559 CarD-like/TRCF domain TQ38_RS25925 PF17757 UvrB interaction domain TQ38_RS25935 PF13823 Alcohol dehydrogenase GroES-associated TQ38_RS25935 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS25935 PF00107 Zinc-binding dehydrogenase TQ38_RS25960 PF11799 impB/mucB/samB family C-terminal domain TQ38_RS25960 PF11798 IMS family HHH motif TQ38_RS25960 PF00817 impB/mucB/samB family TQ38_RS25970 PF00850 Histone deacetylase domain TQ38_RS25975 PF00183 Hsp90 protein TQ38_RS26015 PF12697 Alpha/beta hydrolase family TQ38_RS26025 PF05443 ROS/MUCR transcriptional regulator protein TQ38_RS26060 PF00072 Response regulator receiver domain TQ38_RS26065 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS26065 PF00072 Response regulator receiver domain TQ38_RS26070 PF18073 Rubredoxin metal binding domain TQ38_RS26085 PF05717 IS66 Orf2 like protein TQ38_RS26090 PF01527 Transposase TQ38_RS26095 PF00072 Response regulator receiver domain TQ38_RS26095 PF13188 PAS domain TQ38_RS26095 PF08448 PAS fold TQ38_RS26095 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS26095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS26115 PF01695 IstB-like ATP binding protein TQ38_RS26140 PF04545 Sigma-70, region 4 TQ38_RS26140 PF04542 Sigma-70 region 2 TQ38_RS26140 PF00140 Sigma-70 factor, region 1.2 TQ38_RS26240 PF02371 Transposase IS116/IS110/IS902 family TQ38_RS26240 PF01548 Transposase TQ38_RS26255 PF00216 Bacterial DNA-binding protein TQ38_RS26260 PF04546 Sigma-70, non-essential region TQ38_RS26260 PF00140 Sigma-70 factor, region 1.2 TQ38_RS26260 PF04542 Sigma-70 region 2 TQ38_RS26260 PF04539 Sigma-70 region 3 TQ38_RS26260 PF04545 Sigma-70, region 4 TQ38_RS26260 PF03979 Sigma-70 factor, region 1.1 TQ38_RS26305 PF18340 DNA relaxase TraI 2B/2B-like domain TQ38_RS26305 PF18272 single-stranded DNA binding TraI N-terminal subdomain TQ38_RS26305 PF07057 DNA helicase TraI TQ38_RS26305 PF08751 TrwC relaxase TQ38_RS26305 PF18272 single-stranded DNA binding TraI N-terminal subdomain TQ38_RS26305 PF07057 DNA helicase TraI TQ38_RS26305 PF18340 DNA relaxase TraI 2B/2B-like domain TQ38_RS26305 PF08751 TrwC relaxase TQ38_RS26325 PF00216 Bacterial DNA-binding protein TQ38_RS26340 PF02811 PHP domain TQ38_RS26340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TQ38_RS26340 PF14579 Helix-hairpin-helix motif TQ38_RS26340 PF07733 Bacterial DNA polymerase III alpha NTPase domain TQ38_RS26350 PF00933 Glycosyl hydrolase family 3 N terminal domain TQ38_RS26350 PF14310 Fibronectin type III-like domain TQ38_RS26350 PF01915 Glycosyl hydrolase family 3 C-terminal domain TQ38_RS26355 PF03328 HpcH/HpaI aldolase/citrate lyase family TQ38_RS26360 PF00593 TonB dependent receptor TQ38_RS26360 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS26365 PF07690 Major Facilitator Superfamily TQ38_RS26370 PF02913 FAD linked oxidases, C-terminal domain TQ38_RS26370 PF01565 FAD binding domain TQ38_RS26380 PF00296 Luciferase-like monooxygenase TQ38_RS26385 PF00753 Metallo-beta-lactamase superfamily TQ38_RS26400 PF07676 WD40-like Beta Propeller Repeat TQ38_RS26410 PF07729 FCD domain TQ38_RS26410 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS26420 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS26420 PF00593 TonB dependent receptor TQ38_RS26430 PF01695 IstB-like ATP binding protein TQ38_RS26445 PF13700 Domain of unknown function (DUF4158) TQ38_RS26445 PF01526 Tn3 transposase DDE domain TQ38_RS26455 PF00135 Carboxylesterase family TQ38_RS26460 PF07519 Tannase and feruloyl esterase TQ38_RS26490 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TQ38_RS26515 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS26515 PF00672 HAMP domain TQ38_RS26515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS26520 PF00072 Response regulator receiver domain TQ38_RS26520 PF00486 Transcriptional regulatory protein, C terminal TQ38_RS26530 PF02673 Bacitracin resistance protein BacA TQ38_RS26535 PF09335 SNARE associated Golgi protein TQ38_RS26540 PF03741 Integral membrane protein TerC family TQ38_RS26540 PF03471 Transporter associated domain TQ38_RS26595 PF13614 AAA domain TQ38_RS26610 PF01695 IstB-like ATP binding protein TQ38_RS26615 PF00665 Integrase core domain TQ38_RS26630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS26630 PF08447 PAS fold TQ38_RS26630 PF13426 PAS domain TQ38_RS26630 PF00989 PAS fold TQ38_RS26630 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS26630 PF13493 Domain of unknown function (DUF4118) TQ38_RS26635 PF00072 Response regulator receiver domain TQ38_RS26635 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS26640 PF00171 Aldehyde dehydrogenase family TQ38_RS26645 PF03466 LysR substrate binding domain TQ38_RS26645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS26750 PF01022 Bacterial regulatory protein, arsR family TQ38_RS26755 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS26755 PF13977 BetI-type transcriptional repressor, C-terminal TQ38_RS26760 PF00501 AMP-binding enzyme TQ38_RS26760 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS26775 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS26775 PF00593 TonB dependent receptor TQ38_RS26795 PF03824 High-affinity nickel-transport protein TQ38_RS26810 PF00005 ABC transporter TQ38_RS26815 PF01032 FecCD transport family TQ38_RS26825 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS26825 PF00593 TonB dependent receptor TQ38_RS26840 PF01717 Cobalamin-independent synthase, Catalytic domain TQ38_RS26840 PF08267 Cobalamin-independent synthase, N-terminal domain TQ38_RS26850 PF00330 Aconitase family (aconitate hydratase) TQ38_RS26850 PF00694 Aconitase C-terminal domain TQ38_RS26855 PF04303 PrpF protein TQ38_RS26865 PF00285 Citrate synthase, C-terminal domain TQ38_RS26875 PF00330 Aconitase family (aconitate hydratase) TQ38_RS26875 PF00694 Aconitase C-terminal domain TQ38_RS26880 PF06114 IrrE N-terminal-like domain TQ38_RS26880 PF01381 Helix-turn-helix TQ38_RS26880 PF09856 Predicted transcriptional regulator (DUF2083) TQ38_RS26910 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS26910 PF00593 TonB dependent receptor TQ38_RS26915 PF00326 Prolyl oligopeptidase family TQ38_RS26920 PF00733 Asparagine synthase TQ38_RS26920 PF13537 Glutamine amidotransferase domain TQ38_RS26955 PF08401 Domain of unknown function (DUF1738) TQ38_RS26955 PF18818 Metallopeptidase superfamily domain TQ38_RS26965 PF17762 HTH domain found in ParB protein TQ38_RS26965 PF02195 ParB-like nuclease domain TQ38_RS26985 PF10412 Type IV secretion-system coupling protein DNA-binding domain TQ38_RS26985 PF12615 F sex factor protein N terminal TQ38_RS26990 PF18272 single-stranded DNA binding TraI N-terminal subdomain TQ38_RS26990 PF08751 TrwC relaxase TQ38_RS26990 PF18340 DNA relaxase TraI 2B/2B-like domain TQ38_RS26990 PF07057 DNA helicase TraI TQ38_RS27005 PF00216 Bacterial DNA-binding protein TQ38_RS27020 PF00501 AMP-binding enzyme TQ38_RS27020 PF16177 Acetyl-coenzyme A synthetase N-terminus TQ38_RS27020 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS27025 PF01636 Phosphotransferase enzyme family TQ38_RS27035 PF00501 AMP-binding enzyme TQ38_RS27035 PF13193 AMP-binding enzyme C-terminal domain TQ38_RS27060 PF00890 FAD binding domain TQ38_RS27070 PF00593 TonB dependent receptor TQ38_RS27070 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS27080 PF13577 SnoaL-like domain TQ38_RS27090 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS27090 PF00593 TonB dependent receptor TQ38_RS27110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TQ38_RS27110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TQ38_RS27130 PF00107 Zinc-binding dehydrogenase TQ38_RS27130 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS27140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TQ38_RS27150 PF00890 FAD binding domain TQ38_RS27155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TQ38_RS27155 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS27160 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS27160 PF00107 Zinc-binding dehydrogenase TQ38_RS27180 PF07859 alpha/beta hydrolase fold TQ38_RS27190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS27190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS27190 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS27195 PF02803 Thiolase, C-terminal domain TQ38_RS27195 PF00108 Thiolase, N-terminal domain TQ38_RS27200 PF02136 Nuclear transport factor 2 (NTF2) domain TQ38_RS27205 PF01575 MaoC like domain TQ38_RS27215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS27215 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS27215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS27220 PF00106 short chain dehydrogenase TQ38_RS27230 PF00132 Bacterial transferase hexapeptide (six repeats) TQ38_RS27235 PF02803 Thiolase, C-terminal domain TQ38_RS27235 PF00108 Thiolase, N-terminal domain TQ38_RS27240 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS27240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS27240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS27245 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS27245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS27245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS27250 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS27255 PF03060 Nitronate monooxygenase TQ38_RS27260 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS27270 PF01144 Coenzyme A transferase TQ38_RS27275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TQ38_RS27280 PF08028 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS27280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS27285 PF00561 alpha/beta hydrolase fold TQ38_RS27290 PF01613 Flavin reductase like domain TQ38_RS27295 PF01557 Fumarylacetoacetate (FAA) hydrolase family TQ38_RS27300 PF01118 Semialdehyde dehydrogenase, NAD binding domain TQ38_RS27300 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation TQ38_RS27305 PF07836 DmpG-like communication domain TQ38_RS27305 PF00682 HMGL-like TQ38_RS27325 PF00248 Aldo/keto reductase family TQ38_RS27345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TQ38_RS27345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TQ38_RS27350 PF02515 CoA-transferase family III TQ38_RS27355 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS27360 PF03466 LysR substrate binding domain TQ38_RS27360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS27365 PF02770 Acyl-CoA dehydrogenase, middle domain TQ38_RS27365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TQ38_RS27365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TQ38_RS27375 PF00171 Aldehyde dehydrogenase family TQ38_RS27405 PF00111 2Fe-2S iron-sulfur cluster binding domain TQ38_RS27405 PF00355 Rieske [2Fe-2S] domain TQ38_RS27445 PF00106 short chain dehydrogenase TQ38_RS27460 PF00732 GMC oxidoreductase TQ38_RS27460 PF05199 GMC oxidoreductase TQ38_RS27480 PF00067 Cytochrome P450 TQ38_RS27485 PF00743 Flavin-binding monooxygenase-like TQ38_RS27490 PF03060 Nitronate monooxygenase TQ38_RS27495 PF00378 Enoyl-CoA hydratase/isomerase TQ38_RS27525 PF00108 Thiolase, N-terminal domain TQ38_RS27525 PF02803 Thiolase, C-terminal domain TQ38_RS27540 PF16859 Tetracyclin repressor-like, C-terminal domain TQ38_RS27540 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS27560 PF17932 Tetracyclin repressor-like, C-terminal domain TQ38_RS27560 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS27575 PF00356 Bacterial regulatory proteins, lacI family TQ38_RS27580 PF00455 DeoR C terminal sensor domain TQ38_RS27580 PF08220 DeoR-like helix-turn-helix domain TQ38_RS27585 PF06379 L-rhamnose-proton symport protein (RhaT) TQ38_RS27590 PF01070 FMN-dependent dehydrogenase TQ38_RS27600 PF00596 Class II Aldolase and Adducin N-terminal domain TQ38_RS27605 PF01261 Xylose isomerase-like TIM barrel TQ38_RS27620 PF02371 Transposase IS116/IS110/IS902 family TQ38_RS27620 PF01548 Transposase TQ38_RS27635 PF02321 Outer membrane efflux protein TQ38_RS27645 PF00873 AcrB/AcrD/AcrF family TQ38_RS27650 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS27650 PF00593 TonB dependent receptor TQ38_RS27665 PF00933 Glycosyl hydrolase family 3 N terminal domain TQ38_RS27665 PF01915 Glycosyl hydrolase family 3 C-terminal domain TQ38_RS27665 PF14310 Fibronectin type III-like domain TQ38_RS27670 PF13007 Transposase C of IS166 homeodomain TQ38_RS27670 PF13005 zinc-finger binding domain of transposase IS66 TQ38_RS27670 PF03050 Transposase IS66 family TQ38_RS27670 PF13817 IS66 C-terminal element TQ38_RS27675 PF05717 IS66 Orf2 like protein TQ38_RS27685 PF00440 Bacterial regulatory proteins, tetR family TQ38_RS27685 PF08362 YcdC-like protein, C-terminal region TQ38_RS27690 PF00890 FAD binding domain TQ38_RS27690 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) TQ38_RS27710 PF03050 Transposase IS66 family TQ38_RS27710 PF13817 IS66 C-terminal element TQ38_RS27710 PF13007 Transposase C of IS166 homeodomain TQ38_RS27710 PF13005 zinc-finger binding domain of transposase IS66 TQ38_RS27715 PF05717 IS66 Orf2 like protein TQ38_RS27765 PF01654 Cytochrome bd terminal oxidase subunit I TQ38_RS27780 PF06628 Catalase-related immune-responsive TQ38_RS27780 PF00199 Catalase TQ38_RS27785 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain TQ38_RS27785 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain TQ38_RS27790 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS27795 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS27795 PF00989 PAS fold TQ38_RS27795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS27805 PF00072 Response regulator receiver domain TQ38_RS27805 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS27820 PF00043 Glutathione S-transferase, C-terminal domain TQ38_RS27820 PF13417 Glutathione S-transferase, N-terminal domain TQ38_RS27830 PF00171 Aldehyde dehydrogenase family TQ38_RS27835 PF00248 Aldo/keto reductase family TQ38_RS27840 PF00171 Aldehyde dehydrogenase family TQ38_RS27850 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS27850 PF00107 Zinc-binding dehydrogenase TQ38_RS27855 PF00072 Response regulator receiver domain TQ38_RS27855 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS27860 PF01799 [2Fe-2S] binding domain TQ38_RS27860 PF00111 2Fe-2S iron-sulfur cluster binding domain TQ38_RS27865 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TQ38_RS27870 PF00034 Cytochrome c TQ38_RS27870 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TQ38_RS27870 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TQ38_RS27875 PF02627 Carboxymuconolactone decarboxylase family TQ38_RS27885 PF04224 Protein of unknown function, DUF417 TQ38_RS27890 PF00155 Aminotransferase class I and II TQ38_RS27905 PF00144 Beta-lactamase TQ38_RS27910 PF00106 short chain dehydrogenase TQ38_RS27920 PF00106 short chain dehydrogenase TQ38_RS27925 PF01965 DJ-1/PfpI family TQ38_RS27925 PF12833 Helix-turn-helix domain TQ38_RS27930 PF00072 Response regulator receiver domain TQ38_RS27930 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS27935 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS27935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TQ38_RS27935 PF00403 Heavy-metal-associated domain TQ38_RS27940 PF07992 Pyridine nucleotide-disulphide oxidoreductase TQ38_RS27945 PF12697 Alpha/beta hydrolase family TQ38_RS27945 PF08241 Methyltransferase domain TQ38_RS27950 PF05726 Pirin C-terminal cupin domain TQ38_RS27950 PF02678 Pirin TQ38_RS27955 PF01638 HxlR-like helix-turn-helix TQ38_RS27970 PF13533 Biotin-lipoyl like TQ38_RS27975 PF02321 Outer membrane efflux protein TQ38_RS27980 PF02954 Bacterial regulatory protein, Fis family TQ38_RS27980 PF00158 Sigma-54 interaction domain TQ38_RS27980 PF00072 Response regulator receiver domain TQ38_RS27985 PF13426 PAS domain TQ38_RS27985 PF08447 PAS fold TQ38_RS27985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS27985 PF00989 PAS fold TQ38_RS27985 PF13493 Domain of unknown function (DUF4118) TQ38_RS27985 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS27990 PF00989 PAS fold TQ38_RS27990 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS27990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS28000 PF01638 HxlR-like helix-turn-helix TQ38_RS28005 PF00107 Zinc-binding dehydrogenase TQ38_RS28005 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS28020 PF12697 Alpha/beta hydrolase family TQ38_RS28025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS28025 PF13493 Domain of unknown function (DUF4118) TQ38_RS28025 PF13426 PAS domain TQ38_RS28025 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS28025 PF00989 PAS fold TQ38_RS28025 PF08447 PAS fold TQ38_RS28035 PF00561 alpha/beta hydrolase fold TQ38_RS28045 PF03928 Haem-degrading TQ38_RS28050 PF02525 Flavodoxin-like fold TQ38_RS28055 PF02254 TrkA-N domain TQ38_RS28055 PF00999 Sodium/hydrogen exchanger family TQ38_RS28105 PF00593 TonB dependent receptor TQ38_RS28105 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS28115 PF00248 Aldo/keto reductase family TQ38_RS28120 PF00108 Thiolase, N-terminal domain TQ38_RS28120 PF02803 Thiolase, C-terminal domain TQ38_RS28125 PF01554 MatE TQ38_RS28140 PF00561 alpha/beta hydrolase fold TQ38_RS28145 PF00216 Bacterial DNA-binding protein TQ38_RS28150 PF13635 Domain of unknown function (DUF4143) TQ38_RS28150 PF13173 AAA domain TQ38_RS28195 PF00589 Phage integrase family TQ38_RS28195 PF13356 Arm DNA-binding domain TQ38_RS28215 PF06986 Type-1V conjugative transfer system mating pair stabilisation TQ38_RS28230 PF06834 TraU protein TQ38_RS28325 PF05721 Phytanoyl-CoA dioxygenase (PhyH) TQ38_RS28350 PF01526 Tn3 transposase DDE domain TQ38_RS28350 PF13700 Domain of unknown function (DUF4158) TQ38_RS28355 PF00583 Acetyltransferase (GNAT) family TQ38_RS28360 PF00216 Bacterial DNA-binding protein TQ38_RS28375 PF01494 FAD binding domain TQ38_RS28380 PF04909 Amidohydrolase TQ38_RS28385 PF04303 PrpF protein TQ38_RS28390 PF03737 Aldolase/RraA TQ38_RS28405 PF04909 Amidohydrolase TQ38_RS28410 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit TQ38_RS28415 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase TQ38_RS28420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TQ38_RS28445 PF07519 Tannase and feruloyl esterase TQ38_RS28455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TQ38_RS28460 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) TQ38_RS28465 PF04199 Putative cyclase TQ38_RS28480 PF14310 Fibronectin type III-like domain TQ38_RS28480 PF01915 Glycosyl hydrolase family 3 C-terminal domain TQ38_RS28480 PF00933 Glycosyl hydrolase family 3 N terminal domain TQ38_RS28485 PF04616 Glycosyl hydrolases family 43 TQ38_RS28485 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain TQ38_RS28490 PF01156 Inosine-uridine preferring nucleoside hydrolase TQ38_RS28495 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS28495 PF00593 TonB dependent receptor TQ38_RS28510 PF00933 Glycosyl hydrolase family 3 N terminal domain TQ38_RS28510 PF07691 PA14 domain TQ38_RS28510 PF01915 Glycosyl hydrolase family 3 C-terminal domain TQ38_RS28510 PF14310 Fibronectin type III-like domain TQ38_RS28515 PF03358 NADPH-dependent FMN reductase TQ38_RS28520 PF00296 Luciferase-like monooxygenase TQ38_RS28530 PF00111 2Fe-2S iron-sulfur cluster binding domain TQ38_RS28530 PF00175 Oxidoreductase NAD-binding domain TQ38_RS28550 PF14765 Polyketide synthase dehydratase TQ38_RS28550 PF08659 KR domain TQ38_RS28550 PF02801 Beta-ketoacyl synthase, C-terminal domain TQ38_RS28550 PF00109 Beta-ketoacyl synthase, N-terminal domain TQ38_RS28550 PF00107 Zinc-binding dehydrogenase TQ38_RS28550 PF00550 Phosphopantetheine attachment site TQ38_RS28550 PF08240 Alcohol dehydrogenase GroES-like domain TQ38_RS28550 PF16197 Ketoacyl-synthetase C-terminal extension TQ38_RS28550 PF00698 Acyl transferase domain TQ38_RS28555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TQ38_RS28555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TQ38_RS28560 PF01261 Xylose isomerase-like TIM barrel TQ38_RS28595 PF04199 Putative cyclase TQ38_RS28600 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) TQ38_RS28605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TQ38_RS28610 PF01494 FAD binding domain TQ38_RS28615 PF03466 LysR substrate binding domain TQ38_RS28615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TQ38_RS28620 PF00732 GMC oxidoreductase TQ38_RS28620 PF05199 GMC oxidoreductase TQ38_RS28625 PF07690 Major Facilitator Superfamily TQ38_RS28635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TQ38_RS28635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TQ38_RS28640 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain TQ38_RS28640 PF04616 Glycosyl hydrolases family 43 TQ38_RS28655 PF00232 Glycosyl hydrolase family 1 TQ38_RS28660 PF02837 Glycosyl hydrolases family 2, sugar binding domain TQ38_RS28675 PF00239 Resolvase, N terminal domain TQ38_RS28680 PF11954 Domain of unknown function (DUF3471) TQ38_RS28680 PF00144 Beta-lactamase TQ38_RS28695 PF00593 TonB dependent receptor TQ38_RS28695 PF07715 TonB-dependent Receptor Plug Domain TQ38_RS28700 PF07729 FCD domain TQ38_RS28700 PF00392 Bacterial regulatory proteins, gntR family TQ38_RS28735 PF02371 Transposase IS116/IS110/IS902 family TQ38_RS28735 PF01548 Transposase TQ38_RS28740 PF00654 Voltage gated chloride channel TQ38_RS28770 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TQ38_RS28770 PF00355 Rieske [2Fe-2S] domain TQ38_RS28795 PF14760 Rnk N-terminus TQ38_RS28795 PF01272 Transcription elongation factor, GreA/GreB, C-term TQ38_RS28805 PF05443 ROS/MUCR transcriptional regulator protein TQ38_RS28810 PF04546 Sigma-70, non-essential region TQ38_RS28810 PF04542 Sigma-70 region 2 TQ38_RS28810 PF00140 Sigma-70 factor, region 1.2 TQ38_RS28810 PF04539 Sigma-70 region 3 TQ38_RS28810 PF03979 Sigma-70 factor, region 1.1 TQ38_RS28810 PF04545 Sigma-70, region 4 TQ38_RS28815 PF00563 EAL domain TQ38_RS28815 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS28815 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS28825 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS28825 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS28825 PF00563 EAL domain TQ38_RS28830 PF00970 Oxidoreductase FAD-binding domain TQ38_RS28830 PF00042 Globin TQ38_RS28830 PF00175 Oxidoreductase NAD-binding domain TQ38_RS28835 PF02082 Transcriptional regulator TQ38_RS28860 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS28875 PF05443 ROS/MUCR transcriptional regulator protein TQ38_RS28880 PF08447 PAS fold TQ38_RS28880 PF13426 PAS domain TQ38_RS28880 PF07536 HWE histidine kinase TQ38_RS28885 PF00011 Hsp20/alpha crystallin family TQ38_RS28910 PF01850 PIN domain TQ38_RS28930 PF12792 CSS motif domain associated with EAL TQ38_RS28930 PF00563 EAL domain TQ38_RS28975 PF01370 NAD dependent epimerase/dehydratase family TQ38_RS28980 PF08751 TrwC relaxase TQ38_RS28980 PF18272 single-stranded DNA binding TraI N-terminal subdomain TQ38_RS28980 PF07057 DNA helicase TraI TQ38_RS28980 PF18340 DNA relaxase TraI 2B/2B-like domain TQ38_RS28980 PF08751 TrwC relaxase TQ38_RS28980 PF18272 single-stranded DNA binding TraI N-terminal subdomain TQ38_RS28980 PF18340 DNA relaxase TraI 2B/2B-like domain TQ38_RS28980 PF07057 DNA helicase TraI TQ38_RS29020 PF01050 Mannose-6-phosphate isomerase TQ38_RS29020 PF00483 Nucleotidyl transferase TQ38_RS29030 PF01238 Phosphomannose isomerase type I TQ38_RS29040 PF01381 Helix-turn-helix TQ38_RS29060 PF08401 Domain of unknown function (DUF1738) TQ38_RS29060 PF18818 Metallopeptidase superfamily domain TQ38_RS29060 PF13362 Toprim domain TQ38_RS29085 PF02397 Bacterial sugar transferase TQ38_RS29095 PF07015 VirC1 protein TQ38_RS29135 PF16363 GDP-mannose 4,6 dehydratase TQ38_RS29140 PF01370 NAD dependent epimerase/dehydratase family TQ38_RS29145 PF13579 Glycosyl transferase 4-like domain TQ38_RS29145 PF00534 Glycosyl transferases group 1 TQ38_RS29160 PF00239 Resolvase, N terminal domain TQ38_RS29160 PF07508 Recombinase TQ38_RS29160 PF13408 Recombinase zinc beta ribbon domain TQ38_RS29185 PF13180 PDZ domain TQ38_RS29185 PF17820 PDZ domain TQ38_RS29200 PF13807 G-rich domain on putative tyrosine kinase TQ38_RS29200 PF13614 AAA domain TQ38_RS29200 PF02706 Chain length determinant protein TQ38_RS29210 PF13005 zinc-finger binding domain of transposase IS66 TQ38_RS29210 PF13007 Transposase C of IS166 homeodomain TQ38_RS29210 PF13817 IS66 C-terminal element TQ38_RS29210 PF03050 Transposase IS66 family TQ38_RS29215 PF05717 IS66 Orf2 like protein TQ38_RS29220 PF01527 Transposase TQ38_RS29235 PF13439 Glycosyltransferase Family 4 TQ38_RS29235 PF00534 Glycosyl transferases group 1 TQ38_RS29255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TQ38_RS29255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TQ38_RS29265 PF01565 FAD binding domain TQ38_RS29265 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TQ38_RS29270 PF00132 Bacterial transferase hexapeptide (six repeats) TQ38_RS29275 PF00535 Glycosyl transferase family 2 TQ38_RS29285 PF01609 Transposase DDE domain TQ38_RS29285 PF13006 Insertion element 4 transposase N-terminal TQ38_RS29325 PF13229 Right handed beta helix region TQ38_RS29325 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) TQ38_RS29325 PF12708 Pectate lyase superfamily protein TQ38_RS29330 PF02563 Polysaccharide biosynthesis/export protein TQ38_RS29340 PF01061 ABC-2 type transporter TQ38_RS29345 PF00005 ABC transporter TQ38_RS29355 PF00793 DAHP synthetase I family TQ38_RS29395 PF00535 Glycosyl transferase family 2 TQ38_RS29400 PF02348 Cytidylyltransferase TQ38_RS29405 PF01380 SIS domain TQ38_RS29405 PF00571 CBS domain TQ38_RS29410 PF00459 Inositol monophosphatase family TQ38_RS29415 PF05159 Capsule polysaccharide biosynthesis protein TQ38_RS29425 PF00106 short chain dehydrogenase TQ38_RS29455 PF05159 Capsule polysaccharide biosynthesis protein TQ38_RS29485 PF12419 SNF2 Helicase protein TQ38_RS29485 PF00176 SNF2 family N-terminal domain TQ38_RS29485 PF00271 Helicase conserved C-terminal domain TQ38_RS29490 PF02661 Fic/DOC family TQ38_RS29490 PF12728 Helix-turn-helix domain TQ38_RS29495 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS29495 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS29495 PF00563 EAL domain TQ38_RS29500 PF08448 PAS fold TQ38_RS29500 PF08447 PAS fold TQ38_RS29500 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS29500 PF00563 EAL domain TQ38_RS29505 PF00589 Phage integrase family TQ38_RS29575 PF00989 PAS fold TQ38_RS29575 PF00512 His Kinase A (phospho-acceptor) domain TQ38_RS29575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TQ38_RS29580 PF00072 Response regulator receiver domain TQ38_RS29580 PF00196 Bacterial regulatory proteins, luxR family TQ38_RS29585 PF00669 Bacterial flagellin N-terminal helical region TQ38_RS29585 PF00700 Bacterial flagellin C-terminal helical region TQ38_RS29585 PF00669 Bacterial flagellin N-terminal helical region TQ38_RS29585 PF00700 Bacterial flagellin C-terminal helical region TQ38_RS29595 PF13700 Domain of unknown function (DUF4158) TQ38_RS29595 PF01526 Tn3 transposase DDE domain TQ38_RS29695 PF00239 Resolvase, N terminal domain TQ38_RS29695 PF02796 Helix-turn-helix domain of resolvase TQ38_RS29710 PF05717 IS66 Orf2 like protein TQ38_RS29740 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS29775 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TQ38_RS29785 PF08448 PAS fold TQ38_RS29785 PF03705 CheR methyltransferase, all-alpha domain TQ38_RS29785 PF01739 CheR methyltransferase, SAM binding domain TQ38_RS29785 PF01339 CheB methylesterase TQ38_RS29805 PF00216 Bacterial DNA-binding protein TQ38_RS29815 PF00563 EAL domain TQ38_RS29815 PF00990 Diguanylate cyclase, GGDEF domain TQ38_RS29815 PF03707 Bacterial signalling protein N terminal repeat TQ38_RS29820 PF12697 Alpha/beta hydrolase family