locus-tag	class	description
TQ38_RS00005	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
TQ38_RS00010	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
TQ38_RS00015	COG2833	Protein of unknown function (DUF455)
TQ38_RS00020	COG0739	heme binding
TQ38_RS00030	COG0635	Involved in the biosynthesis of porphyrin-containing compound
TQ38_RS00080	COG3047	cAMP biosynthetic process
TQ38_RS00090	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
TQ38_RS00095	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
TQ38_RS00110	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
TQ38_RS00115	COG1845	cytochrome c oxidase, subunit III
TQ38_RS00120	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
TQ38_RS00125	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
TQ38_RS00130	COG0477	Major facilitator Superfamily
TQ38_RS00140	COG3328	transposase activity
TQ38_RS00190	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
TQ38_RS00195	COG2943	transferase activity, transferring hexosyl groups
TQ38_RS00205	COG4206	TonB-dependent receptor
TQ38_RS00215	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
TQ38_RS00225	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
TQ38_RS00240	COG1492	cobalamin metabolic process
TQ38_RS00260	COG0513	Belongs to the DEAD box helicase family
TQ38_RS00275	COG2814	Major facilitator Superfamily
TQ38_RS00285	COG0501	Belongs to the peptidase M48B family
TQ38_RS00295	COG3275	phosphorelay sensor kinase activity
TQ38_RS00300	COG3279	Response regulator of the LytR AlgR family
TQ38_RS00315	COG0590	tRNA wobble adenosine to inosine editing
TQ38_RS00320	COG0227	Belongs to the bacterial ribosomal protein bL28 family
TQ38_RS00340	COG1570	exodeoxyribonuclease VII activity
TQ38_RS00345	COG0151	Belongs to the GarS family
TQ38_RS00360	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
TQ38_RS00375	COG0259	pyridoxamine-phosphate oxidase activity
TQ38_RS00380	COG0484	heat shock protein binding
TQ38_RS00385	COG1295	ribonuclease BN
TQ38_RS00390	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
TQ38_RS00395	COG0730	response to heat
TQ38_RS00405	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
TQ38_RS00410	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
TQ38_RS00415	COG0793	Belongs to the peptidase S41A family
TQ38_RS00430	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
TQ38_RS00435	COG0799	negative regulation of ribosome biogenesis
TQ38_RS00440	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
TQ38_RS00445	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
TQ38_RS00450	COG0739	heme binding
TQ38_RS00465	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
TQ38_RS00465	COG0604	alcohol dehydrogenase
TQ38_RS00465	COG4221	oxidoreductase activity
TQ38_RS00465	COG3321	synthase
TQ38_RS00485	COG1793	dna ligase
TQ38_RS00490	COG1872	DUF167
TQ38_RS00495	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
TQ38_RS00510	COG0113	porphobilinogen synthase activity
TQ38_RS00515	COG0739	heme binding
TQ38_RS00530	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
TQ38_RS00535	COG1329	Transcriptional regulator
TQ38_RS00545	COG0009	L-threonylcarbamoyladenylate synthase
TQ38_RS00560	COG1956	GAF domain-containing protein
TQ38_RS00580	COG0357	Ribosomal RNA small subunit methyltransferase G
TQ38_RS00585	COG0445	tRNA wobble uridine modification
TQ38_RS00590	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
TQ38_RS00610	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
TQ38_RS00620	COG1981	membrane
TQ38_RS00625	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
TQ38_RS00630	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
TQ38_RS00635	COG0424	maF-like protein
TQ38_RS00640	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
TQ38_RS00645	COG0237	dephospho-CoA kinase activity
TQ38_RS00650	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
TQ38_RS00655	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
TQ38_RS00660	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
TQ38_RS00685	COG0316	Belongs to the HesB IscA family
TQ38_RS00720	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
TQ38_RS00725	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
TQ38_RS00725	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
TQ38_RS00730	COG0583	DNA-binding transcription factor activity
TQ38_RS00735	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
TQ38_RS00755	COG2972	Histidine kinase
TQ38_RS00815	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
TQ38_RS00820	COG1210	Utp--glucose-1-phosphate uridylyltransferase
TQ38_RS00825	COG0196	riboflavin kinase activity
TQ38_RS00835	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
TQ38_RS00840	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
TQ38_RS00845	COG0588	phosphoglycerate mutase activity
TQ38_RS00865	COG0739	heme binding
TQ38_RS00865	COG1196	nuclear chromosome segregation
TQ38_RS00865	COG0741	lytic transglycosylase activity
TQ38_RS00870	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
TQ38_RS00875	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
TQ38_RS00885	COG1253	flavin adenine dinucleotide binding
TQ38_RS00890	COG2885	chlorophyll binding
TQ38_RS00900	COG1218	3'(2'),5'-bisphosphate nucleotidase
TQ38_RS00905	COG0045	succinate-CoA ligase (ADP-forming) activity
TQ38_RS00910	COG2086	electron transfer activity
TQ38_RS00930	COG2733	membrane
TQ38_RS00955	COG0482	sulfurtransferase activity
TQ38_RS00970	COG0316	Belongs to the HesB IscA family
TQ38_RS00980	COG2151	metal-sulfur cluster biosynthetic enzyme
TQ38_RS00990	COG0719	Fe-S assembly protein
TQ38_RS00995	COG0396	ATPase activity
TQ38_RS01000	COG2852	Protein conserved in bacteria
TQ38_RS01005	COG0719	Fe-S assembly protein
TQ38_RS01015	COG0167	dihydroorotate dehydrogenase activity
TQ38_RS01020	COG0405	Gamma-glutamyltransferase
TQ38_RS01025	COG1022	Amp-dependent synthetase and ligase
TQ38_RS01030	COG0387	Pfam Sodium calcium exchanger
TQ38_RS01045	COG2022	thiamine diphosphate biosynthetic process
TQ38_RS01060	COG1612	heme a metabolic process
TQ38_RS01065	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
TQ38_RS01080	COG5006	permease, DMT superfamily
TQ38_RS01100	COG0495	leucyl-tRNA aminoacylation
TQ38_RS01145	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
TQ38_RS01160	COG0070	glutamate synthase
TQ38_RS01160	COG0069	glutamate synthase activity
TQ38_RS01160	COG0067	glutamate synthase
TQ38_RS01170	COG0438	transferase activity, transferring glycosyl groups
TQ38_RS01195	COG1380	Effector of murein hydrolase LrgA
TQ38_RS01200	COG0220	tRNA (guanine-N7-)-methyltransferase activity
TQ38_RS01205	COG0281	malic enzyme
TQ38_RS01205	COG0280	phosphate acetyltransferase
TQ38_RS01210	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
TQ38_RS01225	COG1250	3-hydroxyacyl-CoA dehydrogenase
TQ38_RS01230	COG2096	Adenosyltransferase
TQ38_RS01240	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
TQ38_RS01260	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
TQ38_RS01265	COG3813	Protein conserved in bacteria
TQ38_RS01270	COG0351	phosphomethylpyrimidine kinase
TQ38_RS01275	COG1611	Belongs to the LOG family
TQ38_RS01315	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
TQ38_RS01320	COG0477	Major facilitator Superfamily
TQ38_RS01325	COG4771	TonB-dependent receptor
TQ38_RS01330	COG0583	DNA-binding transcription factor activity
TQ38_RS01355	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
TQ38_RS01360	COG2204	response regulator
TQ38_RS01365	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
TQ38_RS01375	COG2885	chlorophyll binding
TQ38_RS01385	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
TQ38_RS01390	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
TQ38_RS01405	COG2197	response regulator
TQ38_RS01435	COG1706	bacterial-type flagellum-dependent cell motility
TQ38_RS01445	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
TQ38_RS01450	COG1684	flagellar biosynthetic protein fliR
TQ38_RS01460	COG1677	Flagellar hook-basal body complex protein FliE
TQ38_RS01465	COG1558	bacterial-type flagellum-dependent cell motility
TQ38_RS01470	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
TQ38_RS01475	COG3190	flagellar
TQ38_RS01480	COG1338	Plays a role in the flagellum-specific transport system
TQ38_RS01500	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
TQ38_RS01505	COG5442	Flagellar protein FlaF
TQ38_RS01585	COG4786	Flagellar basal body rod
TQ38_RS01590	COG4786	Flagellar basal body rod
TQ38_RS01600	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
TQ38_RS01605	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
TQ38_RS01615	COG0582	viral genome integration into host DNA
TQ38_RS01630	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
TQ38_RS01640	COG0077	Prephenate dehydratase
TQ38_RS01655	COG0714	Associated with various cellular activities
TQ38_RS01675	COG0454	-acetyltransferase
TQ38_RS01680	COG0456	acetyltransferase
TQ38_RS01690	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
TQ38_RS01695	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
TQ38_RS01700	COG0085	RNA polymerase activity
TQ38_RS01715	COG3655	Transcriptional regulator
TQ38_RS01725	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
TQ38_RS01730	COG0222	ribosome binding
TQ38_RS01740	COG0386	Belongs to the glutathione peroxidase family
TQ38_RS01765	COG0583	DNA-binding transcription factor activity
TQ38_RS01785	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
TQ38_RS01790	COG0459	protein refolding
TQ38_RS01805	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
TQ38_RS01805	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
TQ38_RS01815	COG1278	Cold shock
TQ38_RS01825	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
TQ38_RS01835	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TQ38_RS01845	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
TQ38_RS01855	COG0124	histidyl-tRNA synthetase
TQ38_RS01860	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
TQ38_RS01865	COG2890	protein-(glutamine-N5) methyltransferase activity
TQ38_RS01875	COG0815	Transfers the fatty acyl group on membrane lipoproteins
TQ38_RS01880	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
TQ38_RS01885	COG1164	Oligoendopeptidase f
TQ38_RS01930	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS01965	COG4251	negative regulation of phosphorylation
TQ38_RS01965	COG3706	GGDEF domain
TQ38_RS01965	COG2203	Gaf domain
TQ38_RS01965	COG5001	Diguanylate cyclase
TQ38_RS01975	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
TQ38_RS01980	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
TQ38_RS02000	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
TQ38_RS02005	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
TQ38_RS02010	COG0717	Belongs to the dCTP deaminase family
TQ38_RS02025	COG2205	protein histidine kinase activity
TQ38_RS02030	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
TQ38_RS02035	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
TQ38_RS02040	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
TQ38_RS02055	COG3158	transport of potassium into the cell
TQ38_RS02060	COG3273	potassium ion transport
TQ38_RS02060	COG0471	metal ion transport
TQ38_RS02085	COG3750	Belongs to the UPF0335 family
TQ38_RS02285	COG4695	Portal protein
TQ38_RS02315	COG4774	siderophore transport
TQ38_RS02330	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
TQ38_RS02335	COG1262	PFAM Formylglycine-generating sulfatase enzyme
TQ38_RS02360	COG1574	metal-dependent hydrolase with the TIM-barrel fold
TQ38_RS02385	COG0582	viral genome integration into host DNA
TQ38_RS02425	COG3550	peptidyl-serine autophosphorylation
TQ38_RS02445	COG0542	response to heat
TQ38_RS02455	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
TQ38_RS02455	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
TQ38_RS02465	COG1525	nuclease
TQ38_RS02490	COG1396	sequence-specific DNA binding
TQ38_RS02495	COG3040	lipid binding
TQ38_RS02500	COG3311	Transcriptional regulator
TQ38_RS02505	COG4227	nucleotidyltransferase activity
TQ38_RS02545	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
TQ38_RS02555	COG3311	Transcriptional regulator
TQ38_RS02630	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
TQ38_RS02635	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TQ38_RS02670	COG5000	phosphorelay sensor kinase activity
TQ38_RS02695	COG3011	Protein conserved in bacteria
TQ38_RS02715	COG1595	DNA-templated transcription, initiation
TQ38_RS02770	COG2205	protein histidine kinase activity
TQ38_RS02790	COG3634	alkyl hydroperoxide reductase activity
TQ38_RS02795	COG0450	alkyl hydroperoxide reductase
TQ38_RS02800	COG1671	Belongs to the UPF0178 family
TQ38_RS02810	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
TQ38_RS02820	COG1393	Belongs to the ArsC family
TQ38_RS02835	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
TQ38_RS02840	COG0527	aspartate kinase activity
TQ38_RS02845	COG0753	catalase activity
TQ38_RS02855	COG2070	2-Nitropropane dioxygenase
TQ38_RS02905	COG0861	Integral membrane protein TerC family
TQ38_RS02925	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
TQ38_RS02965	COG0037	tRNA processing
TQ38_RS02975	COG1309	transcriptional regulator
TQ38_RS02985	COG2945	thiolester hydrolase activity
TQ38_RS02985	COG0596	Alpha beta hydrolase
TQ38_RS02990	COG2814	Major facilitator Superfamily
TQ38_RS03005	COG2226	methyltransferase
TQ38_RS03010	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
TQ38_RS03020	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
TQ38_RS03025	COG0756	dUTP diphosphatase activity
TQ38_RS03045	COG2258	MOSC domain
TQ38_RS03050	COG0180	Tryptophanyl-tRNA synthetase
TQ38_RS03060	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
TQ38_RS03085	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
TQ38_RS03085	COG0662	Cupin 2, conserved barrel domain protein
TQ38_RS03090	COG1482	cell wall glycoprotein biosynthetic process
TQ38_RS03100	COG4221	oxidoreductase activity
TQ38_RS03120	COG0436	Aminotransferase
TQ38_RS03130	COG4566	intracellular signal transduction
TQ38_RS03155	COG1987	bacterial-type flagellum assembly
TQ38_RS03195	COG1157	protein secretion by the type III secretion system
TQ38_RS03215	COG1677	Flagellar hook-basal body complex protein FliE
TQ38_RS03245	COG1360	Flagellar Motor Protein
TQ38_RS03260	COG4786	Flagellar basal body rod
TQ38_RS03260	COG1256	bacterial-type flagellum assembly
TQ38_RS03270	COG1706	bacterial-type flagellum-dependent cell motility
TQ38_RS03275	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
TQ38_RS03290	COG4786	Flagellar basal body rod
TQ38_RS03310	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
TQ38_RS03350	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
TQ38_RS03365	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TQ38_RS03395	COG1132	(ABC) transporter
TQ38_RS03400	COG3590	peptidase
TQ38_RS03405	COG1968	undecaprenyl-diphosphatase activity
TQ38_RS03415	COG0267	Belongs to the bacterial ribosomal protein bL33 family
TQ38_RS03425	COG0708	Exodeoxyribonuclease III
TQ38_RS03435	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
TQ38_RS03440	COG0268	Binds directly to 16S ribosomal RNA
TQ38_RS03445	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
TQ38_RS03460	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
TQ38_RS03465	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
TQ38_RS03470	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
TQ38_RS03475	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
TQ38_RS03485	COG1301	dicarboxylic acid transport
TQ38_RS03490	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
TQ38_RS03500	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
TQ38_RS03505	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
TQ38_RS03525	COG0489	protein tyrosine kinase activity
TQ38_RS03530	COG2010	Cytochrome c
TQ38_RS03530	COG1529	Aldehyde oxidase and xanthine dehydrogenase
TQ38_RS03535	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
TQ38_RS03550	COG0746	molybdenum cofactor guanylyltransferase activity
TQ38_RS03560	COG0436	Aminotransferase
TQ38_RS03565	COG3243	poly(R)-hydroxyalkanoic acid synthase
TQ38_RS03575	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
TQ38_RS03630	COG0363	glucosamine-6-phosphate deaminase activity
TQ38_RS03635	COG0783	Belongs to the Dps family
TQ38_RS03650	COG1877	trehalose-phosphatase activity
TQ38_RS03655	COG3387	PFAM Glycoside hydrolase 15-related
TQ38_RS03660	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
TQ38_RS03675	COG0321	lipoyl(octanoyl) transferase activity
TQ38_RS03690	COG1393	Belongs to the ArsC family
TQ38_RS03695	COG2080	2 iron, 2 sulfur cluster binding
TQ38_RS03710	COG1678	Uncharacterized ACR, COG1678
TQ38_RS03725	COG0181	hydroxymethylbilane synthase activity
TQ38_RS03730	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
TQ38_RS03735	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
TQ38_RS03750	COG3743	rRNA binding
TQ38_RS03750	COG0261	This protein binds to 23S rRNA in the presence of protein L20
TQ38_RS03760	COG0556	nucleotide-excision repair
TQ38_RS03770	COG2226	methyltransferase
TQ38_RS03770	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TQ38_RS03770	COG0596	Alpha beta hydrolase
TQ38_RS03790	COG0230	Belongs to the bacterial ribosomal protein bL34 family
TQ38_RS03795	COG0594	ribonuclease P activity
TQ38_RS03800	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
TQ38_RS03805	COG0706	membrane insertase activity
TQ38_RS03810	COG0218	Necessary for normal cell division and for the maintenance of normal septation
TQ38_RS03815	COG1392	Phosphate transport regulator
TQ38_RS03820	COG0306	phosphate transporter
TQ38_RS03825	COG0625	glutathione transferase activity
TQ38_RS03840	COG4221	oxidoreductase activity
TQ38_RS03845	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
TQ38_RS03855	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
TQ38_RS03870	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
TQ38_RS03880	COG2095	MarC family integral membrane protein
TQ38_RS03885	COG1742	UPF0060 membrane protein
TQ38_RS03920	COG2226	methyltransferase
TQ38_RS03925	COG0312	modulator of DNA gyrase
TQ38_RS03935	COG1137	ATPase activity
TQ38_RS03940	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
TQ38_RS04005	COG1573	uracil-dna glycosylase
TQ38_RS04015	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
TQ38_RS04075	COG2824	Alkylphosphonate utilization operon protein PhnA
TQ38_RS04080	COG1764	response to oxidative stress
TQ38_RS04090	COG0438	transferase activity, transferring glycosyl groups
TQ38_RS04125	COG0659	secondary active sulfate transmembrane transporter activity
TQ38_RS04140	COG1217	gtp-binding protein TYPA
TQ38_RS04145	COG4771	TonB-dependent receptor
TQ38_RS04150	COG3152	Membrane
TQ38_RS04160	COG4181	ATPase activity
TQ38_RS04170	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
TQ38_RS04205	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
TQ38_RS04225	COG0066	3-isopropylmalate dehydratase activity
TQ38_RS04235	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
TQ38_RS04255	COG2832	Protein of unknown function (DUF454)
TQ38_RS04260	COG2166	iron-sulfur cluster assembly
TQ38_RS04290	COG1842	Phage shock protein A
TQ38_RS04300	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
TQ38_RS04310	COG0779	Required for maturation of 30S ribosomal subunits
TQ38_RS04325	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
TQ38_RS04340	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
TQ38_RS04350	COG1435	thymidine kinase activity
TQ38_RS04360	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
TQ38_RS04365	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
TQ38_RS04370	COG1185	polyribonucleotide nucleotidyltransferase activity
TQ38_RS04390	COG0842	Transport permease protein
TQ38_RS04395	COG3300	MHYT domain
TQ38_RS04395	COG5001	Diguanylate cyclase
TQ38_RS04410	COG0582	viral genome integration into host DNA
TQ38_RS04415	COG5001	Diguanylate cyclase
TQ38_RS04415	COG3300	MHYT domain
TQ38_RS04420	COG1262	PFAM Formylglycine-generating sulfatase enzyme
TQ38_RS04425	COG3119	arylsulfatase activity
TQ38_RS04430	COG3119	arylsulfatase activity
TQ38_RS04435	COG3119	arylsulfatase activity
TQ38_RS04440	COG3119	arylsulfatase activity
TQ38_RS04455	COG4771	TonB-dependent receptor
TQ38_RS04460	COG1472	Belongs to the glycosyl hydrolase 3 family
TQ38_RS04470	COG3119	arylsulfatase activity
TQ38_RS04485	COG2948	multi-organism process
TQ38_RS04500	COG3846	protein secretion by the type IV secretion system
TQ38_RS04510	COG3451	type IV secretory pathway VirB4
TQ38_RS04525	COG4962	Type ii secretion system protein e
TQ38_RS04565	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TQ38_RS04610	COG1506	peptidase
TQ38_RS04610	COG0823	Involved in the tonB-independent uptake of proteins
TQ38_RS04680	COG5489	Protein of unknown function (DUF736)
TQ38_RS04695	COG0741	lytic transglycosylase activity
TQ38_RS04695	COG0739	heme binding
TQ38_RS04695	COG1196	nuclear chromosome segregation
TQ38_RS04715	COG3727	T/G mismatch-specific endonuclease activity
TQ38_RS04740	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
TQ38_RS04765	COG4974	Belongs to the 'phage' integrase family
TQ38_RS04770	COG0517	IMP dehydrogenase activity
TQ38_RS04810	COG0582	viral genome integration into host DNA
TQ38_RS04820	COG4957	zinc ion binding
TQ38_RS04825	COG1609	Transcriptional regulator
TQ38_RS04835	COG2271	Major facilitator Superfamily
TQ38_RS04860	COG1309	transcriptional regulator
TQ38_RS04865	COG3328	transposase activity
TQ38_RS04895	COG0288	reversible hydration of carbon dioxide
TQ38_RS04925	COG2080	2 iron, 2 sulfur cluster binding
TQ38_RS04930	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
TQ38_RS04935	COG1529	Aldehyde oxidase and xanthine dehydrogenase
TQ38_RS04955	COG0656	L-ascorbic acid biosynthetic process
TQ38_RS04960	COG0667	Aldo Keto reductase
TQ38_RS04975	COG4774	siderophore transport
TQ38_RS04985	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS04990	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS05000	COG2130	NADP-dependent
TQ38_RS05005	COG2365	Tyrosine phosphatase family
TQ38_RS05040	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ38_RS05050	COG2223	nitrite transmembrane transporter activity
TQ38_RS05065	COG0129	dihydroxy-acid dehydratase activity
TQ38_RS05070	COG3250	beta-galactosidase activity
TQ38_RS05075	COG3250	beta-galactosidase activity
TQ38_RS05090	COG0288	reversible hydration of carbon dioxide
TQ38_RS05140	COG4529	Protein conserved in bacteria
TQ38_RS05170	COG0753	catalase activity
TQ38_RS05175	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS05200	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
TQ38_RS05205	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
TQ38_RS05205	COG2010	Cytochrome c
TQ38_RS05215	COG0784	Response regulator, receiver
TQ38_RS05220	COG3920	Histidine kinase
TQ38_RS05225	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
TQ38_RS05235	COG2267	carboxylic ester hydrolase activity
TQ38_RS05240	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS05250	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS05255	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
TQ38_RS05265	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS05270	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
TQ38_RS05275	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
TQ38_RS05275	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
TQ38_RS05290	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS05310	COG0583	DNA-binding transcription factor activity
TQ38_RS05315	COG2850	peptidyl-arginine hydroxylation
TQ38_RS05330	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
TQ38_RS05365	COG0280	phosphate acetyltransferase
TQ38_RS05365	COG0281	malic enzyme
TQ38_RS05370	COG0443	Heat shock 70 kDa protein
TQ38_RS05385	COG0251	oxidation-reduction process
TQ38_RS05390	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TQ38_RS05400	COG1522	sequence-specific DNA binding
TQ38_RS05410	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
TQ38_RS05420	COG2205	protein histidine kinase activity
TQ38_RS05430	COG0297	glycogen (starch) synthase activity
TQ38_RS05450	COG3128	pkhd-type hydroxylase
TQ38_RS05485	COG0784	Response regulator, receiver
TQ38_RS05485	COG4191	Histidine kinase
TQ38_RS05495	COG1262	PFAM Formylglycine-generating sulfatase enzyme
TQ38_RS05500	COG0189	ligase activity
TQ38_RS05520	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TQ38_RS05520	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TQ38_RS05535	COG2983	Belongs to the UPF0260 family
TQ38_RS05540	COG1999	signal sequence binding
TQ38_RS05565	COG0629	single-stranded DNA binding
TQ38_RS05590	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
TQ38_RS05595	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
TQ38_RS05625	COG5265	(ABC) transporter
TQ38_RS05685	COG2130	NADP-dependent
TQ38_RS05700	COG3590	peptidase
TQ38_RS05710	COG2130	NADP-dependent
TQ38_RS05720	COG1278	Cold shock
TQ38_RS05730	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS05735	COG4771	TonB-dependent receptor
TQ38_RS05740	COG2130	NADP-dependent
TQ38_RS05745	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS05755	COG4221	oxidoreductase activity
TQ38_RS05760	COG0318	PFAM AMP-dependent synthetase and ligase
TQ38_RS05765	COG4638	Rieske (2fe-2S)
TQ38_RS05810	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS05825	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
TQ38_RS05835	COG0183	Belongs to the thiolase family
TQ38_RS05840	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS05845	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
TQ38_RS05850	COG0022	dehydrogenase e1 component
TQ38_RS05875	COG1758	RNA polymerase activity
TQ38_RS05880	COG1192	Involved in chromosome partitioning
TQ38_RS05890	COG2172	sigma factor antagonist activity
TQ38_RS05895	COG0436	Aminotransferase
TQ38_RS05905	COG2076	Multidrug Resistance protein
TQ38_RS05910	COG0305	Participates in initiation and elongation during chromosome replication
TQ38_RS05915	COG5328	Belongs to the UPF0262 family
TQ38_RS05925	COG0295	cytidine deaminase activity
TQ38_RS05935	COG2866	Carboxypeptidase
TQ38_RS05950	COG0257	Belongs to the bacterial ribosomal protein bL36 family
TQ38_RS05960	COG2308	Evidence 4 Homologs of previously reported genes of
TQ38_RS06000	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
TQ38_RS06015	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
TQ38_RS06015	COG0662	Cupin 2, conserved barrel domain protein
TQ38_RS06020	COG1482	cell wall glycoprotein biosynthetic process
TQ38_RS06065	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
TQ38_RS06085	COG0250	Participates in transcription elongation, termination and antitermination
TQ38_RS06090	COG0456	acetyltransferase
TQ38_RS06100	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
TQ38_RS06105	COG0081	regulation of translation
TQ38_RS06120	COG1546	Belongs to the CinA family
TQ38_RS06120	COG1058	Belongs to the CinA family
TQ38_RS06125	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TQ38_RS06145	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
TQ38_RS06150	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
TQ38_RS06170	COG1160	GTP binding
TQ38_RS06175	COG0628	permease
TQ38_RS06180	COG2193	ferroxidase activity
TQ38_RS06190	COG2311	Membrane
TQ38_RS06200	COG1192	Involved in chromosome partitioning
TQ38_RS06210	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
TQ38_RS06215	COG0540	Belongs to the ATCase OTCase family
TQ38_RS06220	COG0616	signal peptide processing
TQ38_RS06230	COG0544	peptidyl-prolyl cis-trans isomerase activity
TQ38_RS06235	COG2020	methyltransferase activity
TQ38_RS06240	COG0154	amidase activity
TQ38_RS06245	COG0740	serine-type endopeptidase activity
TQ38_RS06250	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
TQ38_RS06275	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
TQ38_RS06280	COG0564	pseudouridine synthase activity
TQ38_RS06295	COG3023	N-Acetylmuramoyl-L-alanine amidase
TQ38_RS06305	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
TQ38_RS06325	COG1215	transferase activity, transferring glycosyl groups
TQ38_RS06335	COG0730	response to heat
TQ38_RS06350	COG0534	Mate efflux family protein
TQ38_RS06360	COG0525	valine-tRNA ligase activity
TQ38_RS06365	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
TQ38_RS06400	COG0546	phosphoglycolate phosphatase activity
TQ38_RS06410	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
TQ38_RS06415	COG0828	Belongs to the bacterial ribosomal protein bS21 family
TQ38_RS06425	COG0545	Peptidyl-prolyl cis-trans isomerase
TQ38_RS06430	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
TQ38_RS06435	COG0154	amidase activity
TQ38_RS06440	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
TQ38_RS06460	COG0542	response to heat
TQ38_RS06470	COG4771	TonB-dependent receptor
TQ38_RS06475	COG4206	TonB-dependent receptor
TQ38_RS06515	COG4964	Belongs to the GSP D family
TQ38_RS06540	COG3422	double-strand break repair
TQ38_RS06550	COG0328	RNA-DNA hybrid ribonuclease activity
TQ38_RS06555	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
TQ38_RS06560	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
TQ38_RS06580	COG4957	zinc ion binding
TQ38_RS06585	COG1214	PFAM Peptidase M22, glycoprotease
TQ38_RS06585	COG0456	acetyltransferase
TQ38_RS06595	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
TQ38_RS06600	COG0612	Peptidase, M16
TQ38_RS06605	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
TQ38_RS06610	COG2917	probably involved in intracellular septation
TQ38_RS06615	COG0552	protein localization to endoplasmic reticulum
TQ38_RS06620	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TQ38_RS06625	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
TQ38_RS06660	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
TQ38_RS06665	COG2814	Major facilitator Superfamily
TQ38_RS06670	COG0583	DNA-binding transcription factor activity
TQ38_RS06685	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
TQ38_RS06695	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TQ38_RS06700	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
TQ38_RS06705	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
TQ38_RS06735	COG3264	Mechanosensitive ion channel
TQ38_RS06735	COG1196	nuclear chromosome segregation
TQ38_RS06740	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TQ38_RS06750	COG2990	Protein conserved in bacteria
TQ38_RS06760	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
TQ38_RS06765	COG2211	Major facilitator Superfamily
TQ38_RS06785	COG1940	carbohydrate kinase activity
TQ38_RS06790	COG1054	Belongs to the UPF0176 family
TQ38_RS06805	COG4774	siderophore transport
TQ38_RS06805	COG1629	transport
TQ38_RS06815	COG4771	TonB-dependent receptor
TQ38_RS06820	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
TQ38_RS06830	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ38_RS06835	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS06840	COG3447	MASE1 domain protein
TQ38_RS06840	COG5001	Diguanylate cyclase
TQ38_RS06840	COG5002	protein histidine kinase activity
TQ38_RS06845	COG1609	Transcriptional regulator
TQ38_RS06880	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS06890	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS06895	COG1024	Enoyl-CoA hydratase
TQ38_RS06900	COG1024	Enoyl-CoA hydratase
TQ38_RS06925	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
TQ38_RS06935	COG1970	mechanosensitive ion channel activity
TQ38_RS06950	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
TQ38_RS06960	COG1733	regulation of RNA biosynthetic process
TQ38_RS06965	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
TQ38_RS06985	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
TQ38_RS07025	COG0488	(ABC) transporter
TQ38_RS07050	COG0287	Prephenate dehydrogenase
TQ38_RS07050	COG1605	Chorismate mutase
TQ38_RS07055	COG0142	geranyltranstransferase activity
TQ38_RS07065	COG5001	Diguanylate cyclase
TQ38_RS07065	COG3300	MHYT domain
TQ38_RS07070	COG1643	Atp-dependent helicase
TQ38_RS07090	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
TQ38_RS07100	COG2311	Membrane
TQ38_RS07105	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
TQ38_RS07135	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
TQ38_RS07140	COG0359	binds to the 23S rRNA
TQ38_RS07145	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
TQ38_RS07150	COG0360	Binds together with S18 to 16S ribosomal RNA
TQ38_RS07190	COG1522	sequence-specific DNA binding
TQ38_RS07200	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
TQ38_RS07225	COG1862	Preprotein translocase
TQ38_RS07230	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
TQ38_RS07235	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
TQ38_RS07240	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
TQ38_RS07245	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
TQ38_RS07250	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
TQ38_RS07255	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
TQ38_RS07260	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
TQ38_RS07270	COG0105	UTP biosynthetic process
TQ38_RS07280	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
TQ38_RS07285	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
TQ38_RS07300	COG1045	serine acetyltransferase
TQ38_RS07315	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS07320	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
TQ38_RS07325	COG0047	phosphoribosylformylglycinamidine synthase activity
TQ38_RS07330	COG3104	oligopeptide transport
TQ38_RS07340	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
TQ38_RS07345	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
TQ38_RS07355	COG4974	Belongs to the 'phage' integrase family
TQ38_RS07375	COG0494	nUDIX hydrolase
TQ38_RS07405	COG0302	gtp cyclohydrolase
TQ38_RS07425	COG0678	peroxiredoxin activity
TQ38_RS07435	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
TQ38_RS07455	COG2205	protein histidine kinase activity
TQ38_RS07460	COG0802	atpase or kinase
TQ38_RS07465	COG3178	'Phosphotransferase
TQ38_RS07470	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
TQ38_RS07480	COG1074	ATP-dependent DNA helicase activity
TQ38_RS07495	COG0625	glutathione transferase activity
TQ38_RS07500	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
TQ38_RS07515	COG0653	protein targeting
TQ38_RS07520	COG0824	Thioesterase
TQ38_RS07540	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
TQ38_RS07555	COG2885	chlorophyll binding
TQ38_RS07565	COG0232	Belongs to the dGTPase family. Type 2 subfamily
TQ38_RS07575	COG2367	Beta-lactamase
TQ38_RS07590	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
TQ38_RS07600	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
TQ38_RS07610	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
TQ38_RS07620	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
TQ38_RS07630	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
TQ38_RS07685	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
TQ38_RS07690	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
TQ38_RS07695	COG0126	phosphoglycerate kinase activity
TQ38_RS07705	COG3588	fructose-bisphosphate aldolase
TQ38_RS07715	COG0352	thiamine-phosphate diphosphorylase activity
TQ38_RS07730	COG1920	GTP binding
TQ38_RS07740	COG0778	Nitroreductase
TQ38_RS07740	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
TQ38_RS07745	COG0391	Required for morphogenesis under gluconeogenic growth conditions
TQ38_RS07760	COG0457	Tetratricopeptide repeat
TQ38_RS07770	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS07775	COG1063	alcohol dehydrogenase
TQ38_RS07785	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS07810	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
TQ38_RS07820	COG0483	inositol monophosphate 1-phosphatase activity
TQ38_RS07850	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
TQ38_RS07855	COG4191	Histidine kinase
TQ38_RS07860	COG2204	response regulator
TQ38_RS07870	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
TQ38_RS07875	COG0531	amino acid
TQ38_RS07900	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
TQ38_RS07935	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
TQ38_RS07950	COG0355	proton-transporting ATP synthase activity, rotational mechanism
TQ38_RS07955	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
TQ38_RS07960	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
TQ38_RS07965	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
TQ38_RS07970	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
TQ38_RS07980	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
TQ38_RS07980	COG2169	Transcriptional regulator
TQ38_RS08000	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
TQ38_RS08010	COG0215	cysteine-tRNA ligase activity
TQ38_RS08015	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
TQ38_RS08020	COG0028	Belongs to the TPP enzyme family
TQ38_RS08040	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TQ38_RS08050	COG0333	Belongs to the bacterial ribosomal protein bL32 family
TQ38_RS08055	COG0416	fatty acid biosynthetic process
TQ38_RS08060	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
TQ38_RS08065	COG0776	regulation of translation
TQ38_RS08075	COG1162	GTPase activity
TQ38_RS08085	COG1199	ATP-dependent helicase activity
TQ38_RS08150	COG0508	dehydrogenase complex catalyzes the overall conversion of
TQ38_RS08150	COG0022	dehydrogenase e1 component
TQ38_RS08155	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
TQ38_RS08165	COG2226	methyltransferase
TQ38_RS08180	COG0004	ammonium transporteR
TQ38_RS08185	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TQ38_RS08195	COG0183	Belongs to the thiolase family
TQ38_RS08200	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
TQ38_RS08205	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
TQ38_RS08210	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
TQ38_RS08215	COG0649	NAD binding
TQ38_RS08230	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
TQ38_RS08235	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
TQ38_RS08245	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
TQ38_RS08250	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
TQ38_RS08260	COG0713	ATP synthesis coupled electron transport
TQ38_RS08275	COG1007	ATP synthesis coupled electron transport
TQ38_RS08285	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
TQ38_RS08310	COG3328	transposase activity
TQ38_RS08335	COG2205	protein histidine kinase activity
TQ38_RS08345	COG0372	Belongs to the citrate synthase family
TQ38_RS08350	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
TQ38_RS08355	COG0658	competence protein
TQ38_RS08355	COG2333	competence protein COMEC
TQ38_RS08360	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
TQ38_RS08365	COG0303	'Molybdopterin
TQ38_RS08370	COG0315	cyclic pyranopterin monophosphate synthase activity
TQ38_RS08375	COG0134	indole-3-glycerol-phosphate synthase activity
TQ38_RS08380	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
TQ38_RS08400	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
TQ38_RS08410	COG0149	triose-phosphate isomerase activity
TQ38_RS08420	COG0504	CTP synthase activity
TQ38_RS08425	COG0673	inositol 2-dehydrogenase activity
TQ38_RS08435	COG0679	Auxin Efflux Carrier
TQ38_RS08440	COG0071	Belongs to the small heat shock protein (HSP20) family
TQ38_RS08450	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TQ38_RS08465	COG0513	Belongs to the DEAD box helicase family
TQ38_RS08500	COG1733	regulation of RNA biosynthetic process
TQ38_RS08530	COG0302	gtp cyclohydrolase
TQ38_RS08535	COG0133	tryptophan synthase activity
TQ38_RS08540	COG4566	intracellular signal transduction
TQ38_RS08545	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
TQ38_RS08560	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
TQ38_RS08620	COG0438	transferase activity, transferring glycosyl groups
TQ38_RS08650	COG0438	transferase activity, transferring glycosyl groups
TQ38_RS08660	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
TQ38_RS08670	COG0300	oxidoreductase activity
TQ38_RS08675	COG0318	PFAM AMP-dependent synthetase and ligase
TQ38_RS08685	COG2197	response regulator
TQ38_RS08710	COG3712	iron ion homeostasis
TQ38_RS08755	COG3701	Conjugal transfer protein
TQ38_RS08775	COG3451	type IV secretory pathway VirB4
TQ38_RS08790	COG4962	Type ii secretion system protein e
TQ38_RS08865	COG0741	lytic transglycosylase activity
TQ38_RS08865	COG0739	heme binding
TQ38_RS08865	COG1196	nuclear chromosome segregation
TQ38_RS08910	COG5489	Protein of unknown function (DUF736)
TQ38_RS08930	COG1475	DNA binding
TQ38_RS08955	COG1294	oxidase, subunit
TQ38_RS08965	COG2391	methyltransferase activity
TQ38_RS08980	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
TQ38_RS08985	COG2249	NAD(P)H dehydrogenase (quinone) activity
TQ38_RS09000	COG4566	intracellular signal transduction
TQ38_RS09005	COG0784	Response regulator, receiver
TQ38_RS09005	COG2205	protein histidine kinase activity
TQ38_RS09010	COG4566	intracellular signal transduction
TQ38_RS09015	COG4191	Histidine kinase
TQ38_RS09020	COG0045	succinate-CoA ligase (ADP-forming) activity
TQ38_RS09020	COG1042	CoA-binding domain protein
TQ38_RS09020	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
TQ38_RS09030	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
TQ38_RS09060	COG1063	alcohol dehydrogenase
TQ38_RS09070	COG0071	Belongs to the small heat shock protein (HSP20) family
TQ38_RS09110	COG0745	RESPONSE REGULATOR receiver
TQ38_RS09115	COG3335	DDE superfamily endonuclease
TQ38_RS09165	COG0471	metal ion transport
TQ38_RS09165	COG3273	potassium ion transport
TQ38_RS09170	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
TQ38_RS09230	COG3609	addiction module antidote protein, CC2985 family
TQ38_RS09260	COG0798	PFAM Bile acid sodium symporter
TQ38_RS09280	COG2433	Pfam Transposase IS66
TQ38_RS09285	COG3436	PFAM IS66 Orf2 family protein
TQ38_RS09305	COG4566	intracellular signal transduction
TQ38_RS09320	COG4566	intracellular signal transduction
TQ38_RS09325	COG4191	Histidine kinase
TQ38_RS09330	COG4771	TonB-dependent receptor
TQ38_RS09350	COG0596	Alpha beta hydrolase
TQ38_RS09355	COG1335	isochorismatase
TQ38_RS09380	COG0582	viral genome integration into host DNA
TQ38_RS09390	COG2951	lytic endotransglycosylase activity
TQ38_RS09405	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
TQ38_RS09415	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TQ38_RS09420	COG0084	hydrolase, TatD family'
TQ38_RS09435	COG3956	TIGRFAM MazG family protein
TQ38_RS09440	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
TQ38_RS09450	COG2204	response regulator
TQ38_RS09455	COG5000	phosphorelay sensor kinase activity
TQ38_RS09460	COG2204	response regulator
TQ38_RS09475	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
TQ38_RS09475	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
TQ38_RS09485	COG1546	Belongs to the CinA family
TQ38_RS09490	COG2867	negative regulation of translational initiation
TQ38_RS09495	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
TQ38_RS09510	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
TQ38_RS09525	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
TQ38_RS09540	COG0508	dehydrogenase complex catalyzes the overall conversion of
TQ38_RS09540	COG0022	dehydrogenase e1 component
TQ38_RS09545	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
TQ38_RS09555	COG0488	(ABC) transporter
TQ38_RS09560	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
TQ38_RS09565	COG0513	Belongs to the DEAD box helicase family
TQ38_RS09585	COG1215	transferase activity, transferring glycosyl groups
TQ38_RS09590	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
TQ38_RS09600	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TQ38_RS09605	COG1607	acyl-coa hydrolase
TQ38_RS09615	COG0508	dehydrogenase complex catalyzes the overall conversion of
TQ38_RS09625	COG0557	exoribonuclease II activity
TQ38_RS09635	COG0442	prolyl-tRNA aminoacylation
TQ38_RS09640	COG0494	nUDIX hydrolase
TQ38_RS09645	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
TQ38_RS09665	COG1752	Esterase of the alpha-beta hydrolase superfamily
TQ38_RS09670	COG0484	heat shock protein binding
TQ38_RS09675	COG0443	Heat shock 70 kDa protein
TQ38_RS09695	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
TQ38_RS09700	COG1420	regulation of RNA biosynthetic process
TQ38_RS09705	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
TQ38_RS09710	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
TQ38_RS09715	COG0635	Involved in the biosynthesis of porphyrin-containing compound
TQ38_RS09720	COG4974	Belongs to the 'phage' integrase family
TQ38_RS09725	COG0586	Pfam SNARE associated Golgi protein
TQ38_RS09730	COG0189	ligase activity
TQ38_RS09735	COG0792	nuclease activity
TQ38_RS09740	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
TQ38_RS09750	COG0187	DNA topoisomerase II activity
TQ38_RS09765	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TQ38_RS09775	COG3739	integral membrane protein
TQ38_RS09790	COG3876	Protein conserved in bacteria
TQ38_RS09800	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
TQ38_RS09825	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
TQ38_RS09830	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
TQ38_RS09840	COG0574	Belongs to the PEP-utilizing enzyme family
TQ38_RS09840	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
TQ38_RS09845	COG0751	glycine-tRNA ligase activity
TQ38_RS09850	COG0752	glycyl-tRNA synthetase alpha subunit
TQ38_RS09865	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
TQ38_RS09870	COG0193	aminoacyl-tRNA hydrolase activity
TQ38_RS09885	COG0012	GTP binding
TQ38_RS09905	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
TQ38_RS09930	COG0772	Belongs to the SEDS family
TQ38_RS09970	COG1295	ribonuclease BN
TQ38_RS09970	COG1959	2 iron, 2 sulfur cluster binding
TQ38_RS09980	COG1024	Enoyl-CoA hydratase
TQ38_RS09985	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
TQ38_RS09985	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
TQ38_RS09990	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
TQ38_RS10005	COG0148	phosphopyruvate hydratase activity
TQ38_RS10035	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
TQ38_RS10050	COG0505	Belongs to the CarA family
TQ38_RS10055	COG1610	YqeY-like protein
TQ38_RS10065	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
TQ38_RS10075	COG0698	ribose 5-phosphate isomerase
TQ38_RS10080	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
TQ38_RS10090	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
TQ38_RS10105	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
TQ38_RS10115	COG1506	peptidase
TQ38_RS10115	COG4946	Tricorn protease homolog
TQ38_RS10115	COG0823	Involved in the tonB-independent uptake of proteins
TQ38_RS10120	COG0343	queuine tRNA-ribosyltransferase activity
TQ38_RS10130	COG0842	Transport permease protein
TQ38_RS10135	COG1131	(ABC) transporter
TQ38_RS10140	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
TQ38_RS10150	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
TQ38_RS10155	COG0142	geranyltranstransferase activity
TQ38_RS10160	COG1722	exodeoxyribonuclease VII activity
TQ38_RS10165	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
TQ38_RS10180	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
TQ38_RS10185	COG0028	Belongs to the TPP enzyme family
TQ38_RS10195	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
TQ38_RS10215	COG2353	YceI-like domain
TQ38_RS10245	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
TQ38_RS10250	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
TQ38_RS10255	COG0509	glycine decarboxylation via glycine cleavage system
TQ38_RS10260	COG0404	The glycine cleavage system catalyzes the degradation of glycine
TQ38_RS10270	COG0232	Belongs to the dGTPase family. Type 2 subfamily
TQ38_RS10310	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
TQ38_RS10315	COG2189	Belongs to the N(4) N(6)-methyltransferase family
TQ38_RS10320	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
TQ38_RS10325	COG2133	pyrroloquinoline quinone binding
TQ38_RS10340	COG0494	nUDIX hydrolase
TQ38_RS10345	COG0617	tRNA 3'-terminal CCA addition
TQ38_RS10360	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
TQ38_RS10375	COG1104	cysteine desulfurase activity
TQ38_RS10380	COG1104	cysteine desulfurase activity
TQ38_RS10385	COG2945	thiolester hydrolase activity
TQ38_RS10405	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
TQ38_RS10410	COG0745	RESPONSE REGULATOR receiver
TQ38_RS10415	COG0642	Histidine kinase
TQ38_RS10425	COG1660	Displays ATPase and GTPase activities
TQ38_RS10440	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
TQ38_RS10450	COG1322	Protein conserved in bacteria
TQ38_RS10455	COG0242	peptide deformylase activity
TQ38_RS10460	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
TQ38_RS10465	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
TQ38_RS10475	COG0101	tRNA pseudouridine synthase activity
TQ38_RS10480	COG2202	Pas domain
TQ38_RS10480	COG3920	Histidine kinase
TQ38_RS10505	COG5507	3-demethylubiquinone-9 3-methyltransferase
TQ38_RS10545	COG0271	Belongs to the BolA IbaG family
TQ38_RS10550	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
TQ38_RS10555	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
TQ38_RS10560	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
TQ38_RS10570	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
TQ38_RS10585	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
TQ38_RS10590	COG0415	Belongs to the DNA photolyase family
TQ38_RS10595	COG0671	phosphoesterase, PA-phosphatase related
TQ38_RS10605	COG1013	pyruvate-flavodoxin oxidoreductase activity
TQ38_RS10610	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
TQ38_RS10610	COG0674	pyruvate-flavodoxin oxidoreductase activity
TQ38_RS10615	COG1051	belongs to the nudix hydrolase family
TQ38_RS10625	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
TQ38_RS10625	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
TQ38_RS10640	COG2321	neutral zinc metallopeptidase
TQ38_RS10655	COG0322	excinuclease ABC activity
TQ38_RS10665	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
TQ38_RS10670	COG0424	maF-like protein
TQ38_RS10680	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
TQ38_RS10690	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TQ38_RS10695	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TQ38_RS10700	COG1538	Outer membrane efflux protein
TQ38_RS10715	COG2814	Major facilitator Superfamily
TQ38_RS10720	COG0183	Belongs to the thiolase family
TQ38_RS10725	COG1846	Transcriptional regulator
TQ38_RS10745	COG0318	PFAM AMP-dependent synthetase and ligase
TQ38_RS10760	COG1024	Enoyl-CoA hydratase
TQ38_RS10775	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS10780	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS10795	COG0318	PFAM AMP-dependent synthetase and ligase
TQ38_RS10800	COG0604	alcohol dehydrogenase
TQ38_RS10810	COG1218	3'(2'),5'-bisphosphate nucleotidase
TQ38_RS10820	COG0175	sulfate reduction
TQ38_RS10830	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS10835	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS10845	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS10860	COG0022	dehydrogenase e1 component
TQ38_RS10865	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
TQ38_RS10875	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
TQ38_RS10885	COG1530	ribonuclease E activity
TQ38_RS10890	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS10895	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
TQ38_RS10905	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
TQ38_RS10910	COG3300	MHYT domain
TQ38_RS10910	COG5001	Diguanylate cyclase
TQ38_RS10915	COG0367	asparagine synthase
TQ38_RS10940	COG3267	Type II secretory pathway component ExeA
TQ38_RS10940	COG3409	Peptidoglycan-binding domain 1 protein
TQ38_RS10965	COG0019	diaminopimelate decarboxylase activity
TQ38_RS10995	COG0492	ferredoxin-NADP+ reductase activity
TQ38_RS11015	COG0725	ABC transporter, periplasmic molybdate-binding protein
TQ38_RS11020	COG4149	molybdate abc transporter
TQ38_RS11025	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
TQ38_RS11030	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS11040	COG1609	Transcriptional regulator
TQ38_RS11055	COG0366	Alpha amylase catalytic
TQ38_RS11060	COG1082	Xylose isomerase domain protein TIM barrel
TQ38_RS11090	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
TQ38_RS11095	COG0456	acetyltransferase
TQ38_RS11100	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
TQ38_RS11105	COG0612	Peptidase, M16
TQ38_RS11110	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
TQ38_RS11120	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
TQ38_RS11140	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
TQ38_RS11145	COG5001	Diguanylate cyclase
TQ38_RS11155	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TQ38_RS11155	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TQ38_RS11160	COG4770	biotin carboxylase activity
TQ38_RS11170	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
TQ38_RS11175	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
TQ38_RS11175	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
TQ38_RS11180	COG0346	lactoylglutathione lyase activity
TQ38_RS11185	COG0183	Belongs to the thiolase family
TQ38_RS11190	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
TQ38_RS11205	COG0166	Belongs to the GPI family
TQ38_RS11210	COG0681	Belongs to the peptidase S26 family
TQ38_RS11215	COG0571	ribonuclease III activity
TQ38_RS11220	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
TQ38_RS11245	COG1754	DNA topoisomerase type I activity
TQ38_RS11245	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
TQ38_RS11255	COG0758	DNA mediated transformation
TQ38_RS11265	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
TQ38_RS11275	COG0156	8-amino-7-oxononanoate synthase activity
TQ38_RS11280	COG1902	pentaerythritol trinitrate reductase activity
TQ38_RS11305	COG1748	Saccharopine dehydrogenase
TQ38_RS11315	COG4106	trans-aconitate 2-methyltransferase activity
TQ38_RS11320	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
TQ38_RS11335	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
TQ38_RS11340	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
TQ38_RS11340	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
TQ38_RS11345	COG0129	dihydroxy-acid dehydratase activity
TQ38_RS11355	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
TQ38_RS11370	COG0741	lytic transglycosylase activity
TQ38_RS11375	COG0521	Mo-molybdopterin cofactor biosynthetic process
TQ38_RS11390	COG0033	Phosphoglucomutase
TQ38_RS11395	COG1858	cytochrome C peroxidase
TQ38_RS11405	COG4771	TonB-dependent receptor
TQ38_RS11430	COG0481	GTPase activity
TQ38_RS11435	COG3300	MHYT domain
TQ38_RS11435	COG5001	Diguanylate cyclase
TQ38_RS11440	COG0493	'glutamate synthase
TQ38_RS11460	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
TQ38_RS11475	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
TQ38_RS11480	COG2354	Protein conserved in bacteria
TQ38_RS11495	COG1573	uracil-dna glycosylase
TQ38_RS11530	COG2130	NADP-dependent
TQ38_RS11560	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
TQ38_RS11565	COG1966	Carbon starvation protein
TQ38_RS11570	COG2879	small protein
TQ38_RS11575	COG1024	Enoyl-CoA hydratase
TQ38_RS11625	COG0538	isocitrate dehydrogenase activity
TQ38_RS11650	COG0318	PFAM AMP-dependent synthetase and ligase
TQ38_RS11665	COG0386	Belongs to the glutathione peroxidase family
TQ38_RS11675	COG1136	(ABC) transporter
TQ38_RS11690	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
TQ38_RS11695	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS11710	COG3682	Transcriptional regulator
TQ38_RS11725	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
TQ38_RS11740	COG2264	protein methyltransferase activity
TQ38_RS11755	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
TQ38_RS11765	COG0497	DNA recombination
TQ38_RS11770	COG4774	siderophore transport
TQ38_RS11775	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
TQ38_RS11785	COG2066	Belongs to the glutaminase family
TQ38_RS11795	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
TQ38_RS11800	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
TQ38_RS11815	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
TQ38_RS11820	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TQ38_RS11825	COG0741	lytic transglycosylase activity
TQ38_RS11865	COG0820	rRNA (adenine-C2-)-methyltransferase activity
TQ38_RS11870	COG0583	DNA-binding transcription factor activity
TQ38_RS11875	COG2967	ApaG domain
TQ38_RS11900	COG0473	3-isopropylmalate dehydrogenase activity
TQ38_RS11905	COG1381	Involved in DNA repair and RecF pathway recombination
TQ38_RS11915	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
TQ38_RS11920	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
TQ38_RS11930	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
TQ38_RS11935	COG0625	glutathione transferase activity
TQ38_RS11950	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
TQ38_RS11975	COG0784	Response regulator, receiver
TQ38_RS11975	COG4191	Histidine kinase
TQ38_RS12000	COG0861	Integral membrane protein TerC family
TQ38_RS12005	COG1181	Belongs to the D-alanine--D-alanine ligase family
TQ38_RS12015	COG2851	Citrate transporter
TQ38_RS12040	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS12055	COG3158	transport of potassium into the cell
TQ38_RS12070	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
TQ38_RS12075	COG1138	Cytochrome C-type biogenesis protein
TQ38_RS12080	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
TQ38_RS12085	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
TQ38_RS12100	COG2032	superoxide dismutase activity
TQ38_RS12105	COG0254	rRNA binding
TQ38_RS12110	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
TQ38_RS12120	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
TQ38_RS12125	COG0750	zinc metalloprotease
TQ38_RS12130	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
TQ38_RS12140	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
TQ38_RS12145	COG0233	cytoplasmic translational termination
TQ38_RS12150	COG0528	UMP kinase activity
TQ38_RS12160	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
TQ38_RS12165	COG0052	Belongs to the universal ribosomal protein uS2 family
TQ38_RS12180	COG0688	phosphatidylethanolamine metabolic process
TQ38_RS12190	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
TQ38_RS12200	COG0776	regulation of translation
TQ38_RS12205	COG0335	large ribosomal subunit rRNA binding
TQ38_RS12210	COG0336	Belongs to the RNA methyltransferase TrmD family
TQ38_RS12215	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
TQ38_RS12220	COG0228	four-way junction DNA binding
TQ38_RS12225	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
TQ38_RS12240	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
TQ38_RS12245	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
TQ38_RS12260	COG0539	negative regulation of cytoplasmic translation
TQ38_RS12270	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TQ38_RS12280	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
TQ38_RS12285	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
TQ38_RS12290	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
TQ38_RS12295	COG0356	it plays a direct role in the translocation of protons across the membrane
TQ38_RS12320	COG2003	Belongs to the UPF0758 family
TQ38_RS12335	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
TQ38_RS12345	COG0284	orotidine-5'-phosphate decarboxylase activity
TQ38_RS12370	COG0133	tryptophan synthase activity
TQ38_RS12380	COG0159	tryptophan synthase activity
TQ38_RS12385	COG0285	dihydrofolate synthase activity
TQ38_RS12395	COG1187	pseudouridine synthase activity
TQ38_RS12400	COG0742	ribosomal rna small subunit methyltransferase
TQ38_RS12410	COG0210	DNA helicase
TQ38_RS12430	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
TQ38_RS12435	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
TQ38_RS12445	COG1595	DNA-templated transcription, initiation
TQ38_RS12450	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
TQ38_RS12465	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
TQ38_RS12495	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
TQ38_RS12520	COG3344	reverse transcriptase
TQ38_RS12545	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TQ38_RS12555	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
TQ38_RS12565	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
TQ38_RS12565	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
TQ38_RS12605	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
TQ38_RS12610	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
TQ38_RS12615	COG1053	succinate dehydrogenase
TQ38_RS12635	COG3300	MHYT domain
TQ38_RS12635	COG5001	Diguanylate cyclase
TQ38_RS12640	COG5001	Diguanylate cyclase
TQ38_RS12670	COG2814	Major facilitator Superfamily
TQ38_RS12685	COG1309	transcriptional regulator
TQ38_RS12700	COG0384	phenazine biosynthesis protein PhzF
TQ38_RS12720	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
TQ38_RS12725	COG0137	argininosuccinate synthase activity
TQ38_RS12730	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
TQ38_RS12740	COG0402	S-adenosylhomocysteine deaminase activity
TQ38_RS12750	COG1529	Aldehyde oxidase and xanthine dehydrogenase
TQ38_RS12760	COG2351	hydroxyisourate hydrolase activity
TQ38_RS12765	COG2072	flavoprotein involved in K transport
TQ38_RS12785	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
TQ38_RS12800	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
TQ38_RS12805	COG2252	PERMEase
TQ38_RS12820	COG0114	fumarate hydratase activity
TQ38_RS12825	COG0583	DNA-binding transcription factor activity
TQ38_RS12830	COG1529	Aldehyde oxidase and xanthine dehydrogenase
TQ38_RS12835	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
TQ38_RS12840	COG2080	2 iron, 2 sulfur cluster binding
TQ38_RS12845	COG0477	Major facilitator Superfamily
TQ38_RS12850	COG1522	sequence-specific DNA binding
TQ38_RS12855	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
TQ38_RS12860	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS12865	COG1250	3-hydroxyacyl-CoA dehydrogenase
TQ38_RS12865	COG1024	Enoyl-CoA hydratase
TQ38_RS12870	COG0183	Belongs to the thiolase family
TQ38_RS12885	COG0318	PFAM AMP-dependent synthetase and ligase
TQ38_RS12895	COG1946	Acyl-CoA thioesterase
TQ38_RS12905	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS12915	COG1448	Aminotransferase
TQ38_RS12945	COG1595	DNA-templated transcription, initiation
TQ38_RS12955	COG1215	transferase activity, transferring glycosyl groups
TQ38_RS12960	COG0438	transferase activity, transferring glycosyl groups
TQ38_RS12965	COG0489	protein tyrosine kinase activity
TQ38_RS12965	COG3206	protein involved in exopolysaccharide biosynthesis
TQ38_RS12990	COG1216	Glycosyl transferase, family 2
TQ38_RS13010	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
TQ38_RS13010	COG2273	Hydrolase Family 16
TQ38_RS13020	COG2327	Polysaccharide pyruvyl transferase
TQ38_RS13030	COG1596	polysaccharide export
TQ38_RS13050	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
TQ38_RS13055	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TQ38_RS13060	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
TQ38_RS13065	COG1523	belongs to the glycosyl hydrolase 13 family
TQ38_RS13070	COG0297	glycogen (starch) synthase activity
TQ38_RS13075	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
TQ38_RS13080	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
TQ38_RS13085	COG0058	SHG alpha-glucan phosphorylase activity
TQ38_RS13095	COG2186	Transcriptional regulator
TQ38_RS13100	COG3153	acetyltransferase
TQ38_RS13100	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TQ38_RS13110	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
TQ38_RS13125	COG0626	cystathionine gamma-synthase activity
TQ38_RS13135	COG5001	Diguanylate cyclase
TQ38_RS13135	COG5002	protein histidine kinase activity
TQ38_RS13135	COG3447	MASE1 domain protein
TQ38_RS13145	COG1648	precorrin-2 dehydrogenase activity
TQ38_RS13145	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
TQ38_RS13165	COG0175	sulfate reduction
TQ38_RS13170	COG2814	Major facilitator Superfamily
TQ38_RS13185	COG1522	sequence-specific DNA binding
TQ38_RS13200	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
TQ38_RS13205	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
TQ38_RS13210	COG0511	ligase activity, forming carbon-carbon bonds
TQ38_RS13215	COG0439	Biotin carboxylase
TQ38_RS13220	COG0825	malonyl-CoA metabolic process
TQ38_RS13280	COG0583	DNA-binding transcription factor activity
TQ38_RS13285	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
TQ38_RS13295	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
TQ38_RS13310	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
TQ38_RS13320	COG1120	ATPase activity
TQ38_RS13350	COG0039	L-malate dehydrogenase activity
TQ38_RS13360	COG0567	Dehydrogenase, E1 component
TQ38_RS13365	COG0508	dehydrogenase complex catalyzes the overall conversion of
TQ38_RS13370	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TQ38_RS13390	COG2860	membrane
TQ38_RS13400	COG1505	serine-type exopeptidase activity
TQ38_RS13405	COG0203	ribosomal protein L17
TQ38_RS13410	COG0202	RNA polymerase activity
TQ38_RS13415	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
TQ38_RS13420	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
TQ38_RS13430	COG0563	adenylate kinase activity
TQ38_RS13435	COG0201	protein transport
TQ38_RS13440	COG0200	Binds to the 23S rRNA
TQ38_RS13450	COG1841	ribosomal large subunit assembly
TQ38_RS13455	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
TQ38_RS13460	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
TQ38_RS13465	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
TQ38_RS13470	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
TQ38_RS13475	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
TQ38_RS13480	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
TQ38_RS13485	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
TQ38_RS13490	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
TQ38_RS13495	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
TQ38_RS13500	COG0255	Belongs to the universal ribosomal protein uL29 family
TQ38_RS13505	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
TQ38_RS13510	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
TQ38_RS13515	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
TQ38_RS13520	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
TQ38_RS13525	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
TQ38_RS13530	COG0089	rRNA binding
TQ38_RS13535	COG0088	Forms part of the polypeptide exit tunnel
TQ38_RS13540	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
TQ38_RS13545	COG0051	transcription antitermination factor activity, RNA binding
TQ38_RS13555	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
TQ38_RS13560	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
TQ38_RS13565	COG0049	tRNA binding
TQ38_RS13570	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
TQ38_RS13595	COG4638	Rieske (2fe-2S)
TQ38_RS13615	COG4251	negative regulation of phosphorylation
TQ38_RS13635	COG2197	response regulator
TQ38_RS13645	COG0252	asparaginase activity
TQ38_RS13650	COG2223	nitrite transmembrane transporter activity
TQ38_RS13675	COG0784	Response regulator, receiver
TQ38_RS13685	COG0784	Response regulator, receiver
TQ38_RS13695	COG3920	Histidine kinase
TQ38_RS13710	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
TQ38_RS13730	COG1959	2 iron, 2 sulfur cluster binding
TQ38_RS13740	COG0730	response to heat
TQ38_RS13785	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
TQ38_RS13790	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
TQ38_RS13805	COG0670	Belongs to the BI1 family
TQ38_RS13810	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
TQ38_RS13830	COG0849	cell division
TQ38_RS13835	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
TQ38_RS13840	COG1181	Belongs to the D-alanine--D-alanine ligase family
TQ38_RS13850	COG0812	UDP-N-acetylmuramate dehydrogenase activity
TQ38_RS13855	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
TQ38_RS13860	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
TQ38_RS13870	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
TQ38_RS13875	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
TQ38_RS13880	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
TQ38_RS13885	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
TQ38_RS13900	COG0275	rRNA processing
TQ38_RS13930	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
TQ38_RS13935	COG2154	pterin-4-alpha-carbinolamine dehydratase
TQ38_RS13940	COG4133	protoheme IX ABC transporter activity
TQ38_RS13945	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
TQ38_RS13965	COG2308	Evidence 4 Homologs of previously reported genes of
TQ38_RS13965	COG2307	Protein conserved in bacteria
TQ38_RS13975	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
TQ38_RS13980	COG0248	Ppx GppA phosphatase
TQ38_RS13985	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
TQ38_RS13990	COG2948	multi-organism process
TQ38_RS14005	COG3451	type IV secretory pathway VirB4
TQ38_RS14035	COG2119	membrane
TQ38_RS14040	COG0745	RESPONSE REGULATOR receiver
TQ38_RS14055	COG1414	Transcriptional regulator
TQ38_RS14060	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS14065	COG0745	RESPONSE REGULATOR receiver
TQ38_RS14070	COG0704	Plays a role in the regulation of phosphate uptake
TQ38_RS14075	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
TQ38_RS14085	COG0573	inorganic phosphate transmembrane transporter activity
TQ38_RS14095	COG3746	phosphate-selective porin O and P
TQ38_RS14105	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
TQ38_RS14110	COG0129	dihydroxy-acid dehydratase activity
TQ38_RS14115	COG0837	glucose binding
TQ38_RS14120	COG0800	Aldolase
TQ38_RS14130	COG2070	2-Nitropropane dioxygenase
TQ38_RS14145	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS14160	COG3724	N-succinylarginine dihydrolase activity
TQ38_RS14165	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
TQ38_RS14175	COG0346	lactoylglutathione lyase activity
TQ38_RS14185	COG3186	Phenylalanine-4-hydroxylase
TQ38_RS14190	COG1522	sequence-specific DNA binding
TQ38_RS14195	COG2902	Dehydrogenase
TQ38_RS14200	COG1940	carbohydrate kinase activity
TQ38_RS14205	COG1621	beta-fructofuranosidase activity
TQ38_RS14220	COG0443	Heat shock 70 kDa protein
TQ38_RS14230	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
TQ38_RS14235	COG2081	HI0933 family
TQ38_RS14240	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
TQ38_RS14245	COG1297	OPT oligopeptide transporter protein
TQ38_RS14250	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
TQ38_RS14255	COG4206	TonB-dependent receptor
TQ38_RS14265	COG2175	clavaminate synthase activity
TQ38_RS14270	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS14275	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS14290	COG1116	anion transmembrane transporter activity
TQ38_RS14295	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
TQ38_RS14300	COG0583	DNA-binding transcription factor activity
TQ38_RS14320	COG0408	coproporphyrinogen oxidase activity
TQ38_RS14325	COG0477	Major facilitator Superfamily
TQ38_RS14330	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS14335	COG2267	carboxylic ester hydrolase activity
TQ38_RS14340	COG0251	oxidation-reduction process
TQ38_RS14345	COG1335	isochorismatase
TQ38_RS14380	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
TQ38_RS14385	COG0484	heat shock protein binding
TQ38_RS14390	COG2885	chlorophyll binding
TQ38_RS14395	COG0823	Involved in the tonB-independent uptake of proteins
TQ38_RS14425	COG0824	Thioesterase
TQ38_RS14435	COG0140	phosphoribosyl-ATP diphosphatase activity
TQ38_RS14445	COG0107	imidazoleglycerol-phosphate synthase activity
TQ38_RS14455	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
TQ38_RS14460	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
TQ38_RS14470	COG0131	Imidazoleglycerol-phosphate dehydratase
TQ38_RS14485	COG0194	GDP metabolic process
TQ38_RS14490	COG2171	N-acyltransferase activity
TQ38_RS14535	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
TQ38_RS14560	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
TQ38_RS14575	COG1607	acyl-coa hydrolase
TQ38_RS14585	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TQ38_RS14585	COG2813	Specifically methylates the guanine in position
TQ38_RS14595	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TQ38_RS14600	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
TQ38_RS14605	COG0287	Prephenate dehydrogenase
TQ38_RS14610	COG1305	Transglutaminase-like
TQ38_RS14630	COG2884	Cell division ATP-binding protein ftsE
TQ38_RS14650	COG1132	(ABC) transporter
TQ38_RS14655	COG1596	polysaccharide export
TQ38_RS14680	COG2244	polysaccharide biosynthetic process
TQ38_RS14705	COG1215	transferase activity, transferring glycosyl groups
TQ38_RS14740	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
TQ38_RS14770	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
TQ38_RS14810	COG2205	protein histidine kinase activity
TQ38_RS14815	COG4773	Receptor
TQ38_RS14835	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS14865	COG1376	ErfK ybiS ycfS ynhG family protein
TQ38_RS14875	COG2239	Acts as a magnesium transporter
TQ38_RS14885	COG2816	NAD+ diphosphatase activity
TQ38_RS14895	COG1194	a g-specific adenine glycosylase
TQ38_RS14920	COG0789	Transcriptional regulator
TQ38_RS14930	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
TQ38_RS14970	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
TQ38_RS14975	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS15020	COG0583	DNA-binding transcription factor activity
TQ38_RS15025	COG0354	folic acid binding
TQ38_RS15040	COG0211	Belongs to the bacterial ribosomal protein bL27 family
TQ38_RS15045	COG0261	This protein binds to 23S rRNA in the presence of protein L20
TQ38_RS15055	COG0314	molybdopterin synthase activity
TQ38_RS15065	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
TQ38_RS15105	COG0109	protoheme IX farnesyltransferase activity
TQ38_RS15110	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
TQ38_RS15115	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
TQ38_RS15120	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
TQ38_RS15125	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
TQ38_RS15130	COG0736	holo-[acyl-carrier-protein] synthase activity
TQ38_RS15135	COG0681	Belongs to the peptidase S26 family
TQ38_RS15140	COG0628	permease
TQ38_RS15150	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
TQ38_RS15170	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
TQ38_RS15170	COG1648	precorrin-2 dehydrogenase activity
TQ38_RS15175	COG0019	diaminopimelate decarboxylase activity
TQ38_RS15185	COG0165	Argininosuccinate lyase
TQ38_RS15190	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
TQ38_RS15195	COG1280	lysine exporter protein (LysE YggA)
TQ38_RS15225	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS15230	COG2072	flavoprotein involved in K transport
TQ38_RS15240	COG1024	Enoyl-CoA hydratase
TQ38_RS15245	COG0427	acetyl-CoA hydrolase
TQ38_RS15255	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS15260	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ38_RS15295	COG1733	regulation of RNA biosynthetic process
TQ38_RS15335	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
TQ38_RS15335	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
TQ38_RS15350	COG1131	(ABC) transporter
TQ38_RS15355	COG1733	regulation of RNA biosynthetic process
TQ38_RS15360	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
TQ38_RS15370	COG0312	modulator of DNA gyrase
TQ38_RS15385	COG2853	Lipoprotein
TQ38_RS15395	COG0519	Catalyzes the synthesis of GMP from XMP
TQ38_RS15395	COG0518	GMP synthase (glutamine-hydrolyzing) activity
TQ38_RS15405	COG4774	siderophore transport
TQ38_RS15420	COG0018	arginyl-trna synthetase
TQ38_RS15425	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TQ38_RS15445	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
TQ38_RS15450	COG1253	flavin adenine dinucleotide binding
TQ38_RS15455	COG0583	DNA-binding transcription factor activity
TQ38_RS15465	COG0156	8-amino-7-oxononanoate synthase activity
TQ38_RS15475	COG4106	trans-aconitate 2-methyltransferase activity
TQ38_RS15475	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
TQ38_RS15480	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
TQ38_RS15485	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
TQ38_RS15490	COG0024	Methionine aminopeptidase
TQ38_RS15500	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
TQ38_RS15515	COG0347	Belongs to the P(II) protein family
TQ38_RS15520	COG0174	glutamine synthetase
TQ38_RS15535	COG0659	secondary active sulfate transmembrane transporter activity
TQ38_RS15540	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
TQ38_RS15545	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
TQ38_RS15550	COG2084	Dehydrogenase
TQ38_RS15555	COG0402	S-adenosylhomocysteine deaminase activity
TQ38_RS15560	COG0805	protein transport
TQ38_RS15565	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
TQ38_RS15570	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
TQ38_RS15575	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
TQ38_RS15580	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
TQ38_RS15585	COG1472	Belongs to the glycosyl hydrolase 3 family
TQ38_RS15595	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS15605	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS15635	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
TQ38_RS15640	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
TQ38_RS15650	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS15660	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
TQ38_RS15665	COG3135	benzoate transporter
TQ38_RS15715	COG0514	ATP-dependent DNA helicase (RecQ)
TQ38_RS15735	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
TQ38_RS15750	COG2255	four-way junction helicase activity
TQ38_RS15755	COG0632	four-way junction helicase activity
TQ38_RS15775	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
TQ38_RS15780	COG0469	pyruvate kinase activity
TQ38_RS15795	COG3750	Belongs to the UPF0335 family
TQ38_RS15805	COG0393	Putative heavy-metal-binding
TQ38_RS15810	COG0217	transcriptional regulatory protein
TQ38_RS15815	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
TQ38_RS15820	COG0475	glutathione-regulated potassium exporter activity
TQ38_RS15820	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
TQ38_RS15855	COG2205	protein histidine kinase activity
TQ38_RS15860	COG0433	COG0433 Predicted ATPase
TQ38_RS15875	COG0564	pseudouridine synthase activity
TQ38_RS15945	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TQ38_RS15965	COG5425	PFAM Usg family protein
TQ38_RS15985	COG4695	Portal protein
TQ38_RS16065	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
TQ38_RS16080	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
TQ38_RS16085	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
TQ38_RS16090	COG1278	Cold shock
TQ38_RS16100	COG0347	Belongs to the P(II) protein family
TQ38_RS16105	COG0004	ammonium transporteR
TQ38_RS16110	COG0347	Belongs to the P(II) protein family
TQ38_RS16120	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
TQ38_RS16125	COG1201	RNA secondary structure unwinding
TQ38_RS16165	COG1494	fructose-1,6-bisphosphatase
TQ38_RS16190	COG0291	Belongs to the bacterial ribosomal protein bL35 family
TQ38_RS16195	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
TQ38_RS16205	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
TQ38_RS16210	COG0072	phenylalanine-tRNA ligase activity
TQ38_RS16220	COG4221	oxidoreductase activity
TQ38_RS16235	COG1192	Involved in chromosome partitioning
TQ38_RS16240	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
TQ38_RS16250	COG0583	DNA-binding transcription factor activity
TQ38_RS16255	COG1902	pentaerythritol trinitrate reductase activity
TQ38_RS16285	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
TQ38_RS16300	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
TQ38_RS16365	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
TQ38_RS16370	COG2857	Cytochrome c1
TQ38_RS16370	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
TQ38_RS16385	COG1496	oxidoreductase activity
TQ38_RS16390	COG0308	aminopeptidase N
TQ38_RS16415	COG2244	polysaccharide biosynthetic process
TQ38_RS16420	COG1213	nucleotidyl transferase
TQ38_RS16445	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
TQ38_RS16465	COG0138	bifunctional purine biosynthesis protein purh
TQ38_RS16480	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
TQ38_RS16485	COG1073	alpha beta
TQ38_RS16495	COG1228	amidohydrolase
TQ38_RS16500	COG3104	oligopeptide transport
TQ38_RS16505	COG0776	regulation of translation
TQ38_RS16520	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
TQ38_RS16530	COG4152	abc transporter atp-binding protein
TQ38_RS16535	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
TQ38_RS16545	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS16575	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
TQ38_RS16585	COG3781	membrane
TQ38_RS16595	COG2957	Belongs to the agmatine deiminase family
TQ38_RS16625	COG0753	catalase activity
TQ38_RS16665	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
TQ38_RS16670	COG3540	Alkaline phosphatase
TQ38_RS16675	COG4335	DNA alkylation repair
TQ38_RS16705	COG1228	amidohydrolase
TQ38_RS16715	COG2909	trisaccharide binding
TQ38_RS16760	COG0864	Transcriptional regulator
TQ38_RS16765	COG1116	anion transmembrane transporter activity
TQ38_RS16780	COG0864	Transcriptional regulator
TQ38_RS16810	COG0457	Tetratricopeptide repeat
TQ38_RS16820	COG4303	Ethanolamine ammonia lyase large subunit
TQ38_RS16825	COG4302	ethanolamine ammonia-lyase activity
TQ38_RS16860	COG5001	Diguanylate cyclase
TQ38_RS16865	COG5001	Diguanylate cyclase
TQ38_RS16870	COG4993	Dehydrogenase
TQ38_RS16900	COG3712	iron ion homeostasis
TQ38_RS16940	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS16945	COG1408	metallophosphoesterase
TQ38_RS16960	COG4774	siderophore transport
TQ38_RS16975	COG0586	Pfam SNARE associated Golgi protein
TQ38_RS16980	COG1253	flavin adenine dinucleotide binding
TQ38_RS16990	COG2205	protein histidine kinase activity
TQ38_RS17010	COG2116	formate transmembrane transporter activity
TQ38_RS17050	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TQ38_RS17060	COG3424	synthase
TQ38_RS17065	COG0644	oxidoreductase
TQ38_RS17070	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
TQ38_RS17080	COG4208	sulfate ABC transporter
TQ38_RS17085	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
TQ38_RS17095	COG4771	TonB-dependent receptor
TQ38_RS17120	COG1053	succinate dehydrogenase
TQ38_RS17125	COG0657	acetylesterase activity
TQ38_RS17130	COG0069	glutamate synthase activity
TQ38_RS17135	COG0028	Belongs to the TPP enzyme family
TQ38_RS17140	COG0488	(ABC) transporter
TQ38_RS17175	COG1024	Enoyl-CoA hydratase
TQ38_RS17185	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS17195	COG1946	Acyl-CoA thioesterase
TQ38_RS17210	COG0508	dehydrogenase complex catalyzes the overall conversion of
TQ38_RS17215	COG0022	dehydrogenase e1 component
TQ38_RS17220	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
TQ38_RS17230	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS17235	COG0318	PFAM AMP-dependent synthetase and ligase
TQ38_RS17245	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS17260	COG1024	Enoyl-CoA hydratase
TQ38_RS17265	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS17270	COG4638	Rieske (2fe-2S)
TQ38_RS17275	COG4638	Rieske (2fe-2S)
TQ38_RS17300	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
TQ38_RS17325	COG4584	PFAM Integrase catalytic
TQ38_RS17330	COG4771	TonB-dependent receptor
TQ38_RS17335	COG1501	Belongs to the glycosyl hydrolase 31 family
TQ38_RS17340	COG1609	Transcriptional regulator
TQ38_RS17345	COG4989	oxidoreductase activity
TQ38_RS17355	COG4191	Histidine kinase
TQ38_RS17355	COG0784	Response regulator, receiver
TQ38_RS17410	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
TQ38_RS17420	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TQ38_RS17430	COG0601	transmembrane transport
TQ38_RS17435	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ38_RS17455	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TQ38_RS17460	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS17475	COG0473	3-isopropylmalate dehydrogenase activity
TQ38_RS17480	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
TQ38_RS17485	COG1522	sequence-specific DNA binding
TQ38_RS17490	COG1473	amidohydrolase
TQ38_RS17500	COG2132	Multicopper oxidase
TQ38_RS17575	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
TQ38_RS17585	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
TQ38_RS17605	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TQ38_RS17620	COG2205	protein histidine kinase activity
TQ38_RS17625	COG0745	RESPONSE REGULATOR receiver
TQ38_RS17630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TQ38_RS17635	COG1136	(ABC) transporter
TQ38_RS17635	COG0577	efflux transmembrane transporter activity
TQ38_RS17645	COG2084	Dehydrogenase
TQ38_RS17655	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS17660	COG1309	transcriptional regulator
TQ38_RS17695	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
TQ38_RS17710	COG4191	Histidine kinase
TQ38_RS17720	COG4191	Histidine kinase
TQ38_RS17725	COG4566	intracellular signal transduction
TQ38_RS17735	COG0584	glycerophosphoryl diester phosphodiesterase
TQ38_RS17745	COG1940	carbohydrate kinase activity
TQ38_RS17755	COG2433	Pfam Transposase IS66
TQ38_RS17760	COG3436	PFAM IS66 Orf2 family protein
TQ38_RS17770	COG1940	carbohydrate kinase activity
TQ38_RS17770	COG1846	Transcriptional regulator
TQ38_RS17780	COG1049	propionate catabolic process, 2-methylcitrate cycle
TQ38_RS17785	COG1252	NADH dehydrogenase
TQ38_RS17825	COG1940	carbohydrate kinase activity
TQ38_RS17825	COG1846	Transcriptional regulator
TQ38_RS17830	COG4771	TonB-dependent receptor
TQ38_RS17850	COG3250	beta-galactosidase activity
TQ38_RS17855	COG1309	transcriptional regulator
TQ38_RS17905	COG0450	alkyl hydroperoxide reductase
TQ38_RS17910	COG0242	peptide deformylase activity
TQ38_RS17915	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS17930	COG1132	(ABC) transporter
TQ38_RS17935	COG1132	(ABC) transporter
TQ38_RS17955	COG4172	Belongs to the ABC transporter superfamily
TQ38_RS17960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ38_RS17970	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS17990	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS18015	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS18035	COG2375	cellular response to nickel ion
TQ38_RS18035	COG1132	(ABC) transporter
TQ38_RS18045	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS18055	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
TQ38_RS18060	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
TQ38_RS18065	COG1116	anion transmembrane transporter activity
TQ38_RS18075	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS18080	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS18115	COG1473	amidohydrolase
TQ38_RS18135	COG4451	ribulose bisphosphate carboxylase, small
TQ38_RS18185	COG0587	DNA-directed DNA polymerase activity
TQ38_RS18210	COG4221	oxidoreductase activity
TQ38_RS18240	COG2204	response regulator
TQ38_RS18245	COG2205	protein histidine kinase activity
TQ38_RS18270	COG3011	Protein conserved in bacteria
TQ38_RS18295	COG0210	DNA helicase
TQ38_RS18310	COG4957	zinc ion binding
TQ38_RS18335	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
TQ38_RS18350	COG4771	TonB-dependent receptor
TQ38_RS18370	COG0784	Response regulator, receiver
TQ38_RS18380	COG3237	CsbD-like
TQ38_RS18385	COG4566	intracellular signal transduction
TQ38_RS18390	COG4191	Histidine kinase
TQ38_RS18425	COG1301	dicarboxylic acid transport
TQ38_RS18435	COG0318	PFAM AMP-dependent synthetase and ligase
TQ38_RS18465	COG4771	TonB-dependent receptor
TQ38_RS18490	COG0673	inositol 2-dehydrogenase activity
TQ38_RS18495	COG2211	Major facilitator Superfamily
TQ38_RS18520	COG0730	response to heat
TQ38_RS18525	COG0583	DNA-binding transcription factor activity
TQ38_RS18530	COG2226	methyltransferase
TQ38_RS18535	COG0730	response to heat
TQ38_RS18570	COG4974	Belongs to the 'phage' integrase family
TQ38_RS18625	COG3311	Transcriptional regulator
TQ38_RS18630	COG0582	viral genome integration into host DNA
TQ38_RS18680	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
TQ38_RS18860	COG0179	Fumarylacetoacetate (FAA) hydrolase
TQ38_RS18870	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TQ38_RS18875	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
TQ38_RS18900	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TQ38_RS18965	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS18975	COG0667	Aldo Keto reductase
TQ38_RS18980	COG2814	Major facilitator Superfamily
TQ38_RS19005	COG1053	succinate dehydrogenase
TQ38_RS19070	COG4952	isomerase
TQ38_RS19075	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS19075	COG3347	Dehydrogenase
TQ38_RS19090	COG1349	DNA-binding transcription factor activity
TQ38_RS19105	COG2211	Major facilitator Superfamily
TQ38_RS19110	COG4948	Mandelate Racemase Muconate Lactonizing
TQ38_RS19120	COG3254	rhamnose metabolic process
TQ38_RS19130	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS19135	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ38_RS19145	COG1024	Enoyl-CoA hydratase
TQ38_RS19155	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TQ38_RS19160	COG0572	uridine kinase
TQ38_RS19165	COG1304	FMN binding
TQ38_RS19175	COG3250	beta-galactosidase activity
TQ38_RS19180	COG3250	beta-galactosidase activity
TQ38_RS19190	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS19195	COG0179	Fumarylacetoacetate (FAA) hydrolase
TQ38_RS19205	COG3618	amidohydrolase
TQ38_RS19215	COG0477	Major facilitator Superfamily
TQ38_RS19220	COG2814	Major facilitator Superfamily
TQ38_RS19225	COG0527	aspartate kinase activity
TQ38_RS19230	COG5285	phytanoyl-CoA dioxygenase
TQ38_RS19235	COG1917	Cupin 2, conserved barrel domain protein
TQ38_RS19240	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
TQ38_RS19245	COG0456	acetyltransferase
TQ38_RS19250	COG1846	Transcriptional regulator
TQ38_RS19255	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
TQ38_RS19260	COG1278	Cold shock
TQ38_RS19290	COG3940	Belongs to the glycosyl hydrolase 43 family
TQ38_RS19295	COG2723	6-phospho-beta-galactosidase activity
TQ38_RS19300	COG0657	acetylesterase activity
TQ38_RS19310	COG4206	TonB-dependent receptor
TQ38_RS19315	COG0179	Fumarylacetoacetate (FAA) hydrolase
TQ38_RS19330	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TQ38_RS19345	COG4957	zinc ion binding
TQ38_RS19350	COG0628	permease
TQ38_RS19365	COG0322	excinuclease ABC activity
TQ38_RS19370	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
TQ38_RS19385	COG0300	oxidoreductase activity
TQ38_RS19445	COG0583	DNA-binding transcription factor activity
TQ38_RS19450	COG3119	arylsulfatase activity
TQ38_RS19470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS19475	COG0625	glutathione transferase activity
TQ38_RS19480	COG1823	symporter activity
TQ38_RS19505	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS19515	COG0601	transmembrane transport
TQ38_RS19520	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ38_RS19525	COG4172	Belongs to the ABC transporter superfamily
TQ38_RS19530	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS19595	COG3177	Filamentation induced by cAMP protein fic
TQ38_RS19600	COG3328	transposase activity
TQ38_RS19605	COG0235	Class ii aldolase
TQ38_RS19610	COG3474	cytochrome
TQ38_RS19615	COG0028	Belongs to the TPP enzyme family
TQ38_RS19615	COG0028	Belongs to the TPP enzyme family
TQ38_RS19620	COG2010	Cytochrome c
TQ38_RS19645	COG0235	Class ii aldolase
TQ38_RS19650	COG0625	glutathione transferase activity
TQ38_RS19660	COG0412	Dienelactone hydrolase
TQ38_RS19665	COG0583	DNA-binding transcription factor activity
TQ38_RS19680	COG1522	sequence-specific DNA binding
TQ38_RS19685	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
TQ38_RS19690	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
TQ38_RS19705	COG0446	pyridine nucleotide-disulphide oxidoreductase
TQ38_RS19705	COG0404	The glycine cleavage system catalyzes the degradation of glycine
TQ38_RS19715	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TQ38_RS19735	COG4774	siderophore transport
TQ38_RS19740	COG4771	TonB-dependent receptor
TQ38_RS19750	COG0477	Major facilitator Superfamily
TQ38_RS19755	COG0277	FAD linked oxidase domain protein
TQ38_RS19805	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
TQ38_RS19810	COG2814	Major facilitator Superfamily
TQ38_RS19900	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS19905	COG0583	DNA-binding transcription factor activity
TQ38_RS19930	COG1522	sequence-specific DNA binding
TQ38_RS19955	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TQ38_RS19970	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
TQ38_RS19985	COG1522	sequence-specific DNA binding
TQ38_RS20015	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
TQ38_RS20020	COG4771	TonB-dependent receptor
TQ38_RS20025	COG2814	Major facilitator Superfamily
TQ38_RS20030	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
TQ38_RS20035	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS20045	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
TQ38_RS20085	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
TQ38_RS20090	COG2814	Major facilitator Superfamily
TQ38_RS20110	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS20150	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
TQ38_RS20165	COG2207	Transcriptional regulator
TQ38_RS20195	COG3177	Filamentation induced by cAMP protein fic
TQ38_RS20200	COG0596	Alpha beta hydrolase
TQ38_RS20215	COG0753	catalase activity
TQ38_RS20230	COG3321	synthase
TQ38_RS20230	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS20230	COG0604	alcohol dehydrogenase
TQ38_RS20245	COG0488	(ABC) transporter
TQ38_RS20250	COG2814	Major facilitator Superfamily
TQ38_RS20270	COG0738	Major facilitator superfamily
TQ38_RS20275	COG0596	Alpha beta hydrolase
TQ38_RS20285	COG1764	response to oxidative stress
TQ38_RS20290	COG0596	Alpha beta hydrolase
TQ38_RS20310	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS20315	COG1309	transcriptional regulator
TQ38_RS20320	COG3344	reverse transcriptase
TQ38_RS20330	COG3547	Transposase (IS116 IS110 IS902 family)
TQ38_RS20335	COG0640	Transcriptional regulator
TQ38_RS20365	COG3328	transposase activity
TQ38_RS20460	COG2814	Major facilitator Superfamily
TQ38_RS20490	COG4771	TonB-dependent receptor
TQ38_RS20500	COG1595	DNA-templated transcription, initiation
TQ38_RS20525	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS20540	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS20550	COG2124	cytochrome p450
TQ38_RS20565	COG0318	PFAM AMP-dependent synthetase and ligase
TQ38_RS20580	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS20615	COG1301	dicarboxylic acid transport
TQ38_RS20625	COG4771	TonB-dependent receptor
TQ38_RS20670	COG0129	dihydroxy-acid dehydratase activity
TQ38_RS20690	COG0477	Major facilitator Superfamily
TQ38_RS20700	COG1609	Transcriptional regulator
TQ38_RS20705	COG3661	Belongs to the glycosyl hydrolase 67 family
TQ38_RS20710	COG1472	Belongs to the glycosyl hydrolase 3 family
TQ38_RS20715	COG4948	Mandelate Racemase Muconate Lactonizing
TQ38_RS20720	COG2271	Major facilitator Superfamily
TQ38_RS20725	COG1904	glucuronate isomerase
TQ38_RS20730	COG0246	Mannitol dehydrogenase
TQ38_RS20795	COG1231	oxidoreductase activity
TQ38_RS20825	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
TQ38_RS20825	COG4651	solute:proton antiporter activity
TQ38_RS20845	COG1131	(ABC) transporter
TQ38_RS20860	COG0596	Alpha beta hydrolase
TQ38_RS20865	COG2814	Major facilitator Superfamily
TQ38_RS20870	COG1309	transcriptional regulator
TQ38_RS20875	COG3693	PFAM glycoside hydrolase, family 10
TQ38_RS20875	COG3507	Belongs to the glycosyl hydrolase 43 family
TQ38_RS20875	COG2382	esterase
TQ38_RS20890	COG0693	protein deglycase activity
TQ38_RS20905	COG0583	DNA-binding transcription factor activity
TQ38_RS20925	COG0326	Molecular chaperone. Has ATPase activity
TQ38_RS20930	COG0123	including yeast histone deacetylase and acetoin utilization protein
TQ38_RS20960	COG1301	dicarboxylic acid transport
TQ38_RS20970	COG0318	PFAM AMP-dependent synthetase and ligase
TQ38_RS21015	COG0666	response to abiotic stimulus
TQ38_RS21025	COG0300	oxidoreductase activity
TQ38_RS21065	COG0492	ferredoxin-NADP+ reductase activity
TQ38_RS21080	COG2084	Dehydrogenase
TQ38_RS21085	COG4948	Mandelate Racemase Muconate Lactonizing
TQ38_RS21090	COG2271	Major facilitator Superfamily
TQ38_RS21105	COG2186	Transcriptional regulator
TQ38_RS21115	COG4191	Histidine kinase
TQ38_RS21115	COG0784	Response regulator, receiver
TQ38_RS21135	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TQ38_RS21140	COG3938	Belongs to the proline racemase family
TQ38_RS21145	COG1506	peptidase
TQ38_RS21145	COG0823	Involved in the tonB-independent uptake of proteins
TQ38_RS21150	COG3250	beta-galactosidase activity
TQ38_RS21155	COG4206	TonB-dependent receptor
TQ38_RS21160	COG0598	Magnesium transport protein CorA
TQ38_RS21180	COG4774	siderophore transport
TQ38_RS21195	COG3712	iron ion homeostasis
TQ38_RS21260	COG3214	Protein conserved in bacteria
TQ38_RS21295	COG4677	pectinesterase activity
TQ38_RS21315	COG3344	reverse transcriptase
TQ38_RS21345	COG0753	catalase activity
TQ38_RS21350	COG0297	glycogen (starch) synthase activity
TQ38_RS21390	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
TQ38_RS21415	COG1597	lipid kinase activity
TQ38_RS21415	COG1803	Methylglyoxal synthase
TQ38_RS21420	COG0483	inositol monophosphate 1-phosphatase activity
TQ38_RS21430	COG2200	EAL domain
TQ38_RS21430	COG2199	diguanylate cyclase activity
TQ38_RS21430	COG2203	Gaf domain
TQ38_RS21475	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
TQ38_RS21500	COG4957	zinc ion binding
TQ38_RS21555	COG0776	regulation of translation
TQ38_RS21580	COG3547	Transposase (IS116 IS110 IS902 family)
TQ38_RS21600	COG2826	transposase and inactivated derivatives, IS30 family
TQ38_RS21615	COG0776	regulation of translation
TQ38_RS21635	COG3436	PFAM IS66 Orf2 family protein
TQ38_RS21645	COG2826	transposase and inactivated derivatives, IS30 family
TQ38_RS21680	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
TQ38_RS21695	COG0438	transferase activity, transferring glycosyl groups
TQ38_RS21700	COG0366	Alpha amylase catalytic
TQ38_RS21710	COG0297	glycogen (starch) synthase activity
TQ38_RS21745	COG4974	Belongs to the 'phage' integrase family
TQ38_RS21800	COG4227	nucleotidyltransferase activity
TQ38_RS21805	COG3311	Transcriptional regulator
TQ38_RS21810	COG0582	viral genome integration into host DNA
TQ38_RS21845	COG5001	Diguanylate cyclase
TQ38_RS21845	COG3300	MHYT domain
TQ38_RS21865	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS21870	COG0583	DNA-binding transcription factor activity
TQ38_RS21885	COG4771	TonB-dependent receptor
TQ38_RS21900	COG0561	phosphatase activity
TQ38_RS21920	COG0642	Histidine kinase
TQ38_RS21925	COG0745	RESPONSE REGULATOR receiver
TQ38_RS21955	COG1595	DNA-templated transcription, initiation
TQ38_RS21960	COG3712	iron ion homeostasis
TQ38_RS21965	COG4774	siderophore transport
TQ38_RS22010	COG0778	Nitroreductase
TQ38_RS22020	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
TQ38_RS22025	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
TQ38_RS22045	COG4772	TonB-dependent receptor
TQ38_RS22060	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
TQ38_RS22070	COG0243	molybdopterin cofactor binding
TQ38_RS22080	COG1230	cation diffusion facilitator family transporter
TQ38_RS22085	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS22105	COG1192	Involved in chromosome partitioning
TQ38_RS22115	COG0583	DNA-binding transcription factor activity
TQ38_RS22120	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TQ38_RS22150	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS22165	COG0583	DNA-binding transcription factor activity
TQ38_RS22170	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
TQ38_RS22175	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
TQ38_RS22290	COG4251	negative regulation of phosphorylation
TQ38_RS22290	COG5001	Diguanylate cyclase
TQ38_RS22290	COG3706	GGDEF domain
TQ38_RS22290	COG2203	Gaf domain
TQ38_RS22295	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS22300	COG0583	DNA-binding transcription factor activity
TQ38_RS22320	COG0154	amidase activity
TQ38_RS22325	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS22335	COG2204	response regulator
TQ38_RS22340	COG4191	Histidine kinase
TQ38_RS22360	COG0154	amidase activity
TQ38_RS22365	COG1609	Transcriptional regulator
TQ38_RS22370	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
TQ38_RS22385	COG0673	inositol 2-dehydrogenase activity
TQ38_RS22400	COG2207	Transcriptional regulator
TQ38_RS22415	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
TQ38_RS22420	COG2175	clavaminate synthase activity
TQ38_RS22430	COG0402	S-adenosylhomocysteine deaminase activity
TQ38_RS22435	COG1335	isochorismatase
TQ38_RS22440	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS22470	COG0784	Response regulator, receiver
TQ38_RS22470	COG4191	Histidine kinase
TQ38_RS22475	COG2271	Major facilitator Superfamily
TQ38_RS22495	COG0402	S-adenosylhomocysteine deaminase activity
TQ38_RS22500	COG2175	clavaminate synthase activity
TQ38_RS22510	COG2186	Transcriptional regulator
TQ38_RS22575	COG4771	TonB-dependent receptor
TQ38_RS22585	COG3300	MHYT domain
TQ38_RS22585	COG5001	Diguanylate cyclase
TQ38_RS22590	COG1064	alcohol dehydrogenase
TQ38_RS22595	COG0745	RESPONSE REGULATOR receiver
TQ38_RS22635	COG0129	dihydroxy-acid dehydratase activity
TQ38_RS22650	COG2186	Transcriptional regulator
TQ38_RS22680	COG3940	Belongs to the glycosyl hydrolase 43 family
TQ38_RS22750	COG0583	DNA-binding transcription factor activity
TQ38_RS22760	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
TQ38_RS22770	COG4206	TonB-dependent receptor
TQ38_RS22775	COG3511	phospholipase C
TQ38_RS22795	COG3025	triphosphatase activity
TQ38_RS22800	COG0243	molybdopterin cofactor binding
TQ38_RS22805	COG3707	response regulator
TQ38_RS22810	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
TQ38_RS22810	COG1116	anion transmembrane transporter activity
TQ38_RS22815	COG2223	nitrite transmembrane transporter activity
TQ38_RS22825	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
TQ38_RS22835	COG1648	precorrin-2 dehydrogenase activity
TQ38_RS22835	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
TQ38_RS22840	COG0303	'Molybdopterin
TQ38_RS22845	COG1609	Transcriptional regulator
TQ38_RS22850	COG3250	beta-galactosidase activity
TQ38_RS22870	COG2271	Major facilitator Superfamily
TQ38_RS22875	COG3046	protein related to deoxyribodipyrimidine photolyase
TQ38_RS22880	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
TQ38_RS22885	COG4191	Histidine kinase
TQ38_RS22885	COG0784	Response regulator, receiver
TQ38_RS22895	COG0730	response to heat
TQ38_RS22905	COG0626	cystathionine gamma-synthase activity
TQ38_RS22910	COG1522	sequence-specific DNA binding
TQ38_RS22915	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
TQ38_RS22940	COG1228	amidohydrolase
TQ38_RS22950	COG2186	Transcriptional regulator
TQ38_RS22965	COG0277	FAD linked oxidase domain protein
TQ38_RS22975	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS22995	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ38_RS23005	COG0583	DNA-binding transcription factor activity
TQ38_RS23010	COG1024	Enoyl-CoA hydratase
TQ38_RS23025	COG4774	siderophore transport
TQ38_RS23060	COG4948	Mandelate Racemase Muconate Lactonizing
TQ38_RS23065	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TQ38_RS23075	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS23080	COG3734	2-keto-3-deoxy-galactonokinase
TQ38_RS23090	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS23110	COG0154	amidase activity
TQ38_RS23130	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
TQ38_RS23170	COG2099	Precorrin-6x reductase
TQ38_RS23185	COG2875	Belongs to the precorrin methyltransferase family
TQ38_RS23200	COG2211	Major facilitator Superfamily
TQ38_RS23215	COG0583	DNA-binding transcription factor activity
TQ38_RS23220	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS23230	COG2382	esterase
TQ38_RS23235	COG0657	acetylesterase activity
TQ38_RS23235	COG2755	lipolytic protein G-D-S-L family
TQ38_RS23255	COG3474	cytochrome
TQ38_RS23280	COG4106	trans-aconitate 2-methyltransferase activity
TQ38_RS23285	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS23315	COG2267	carboxylic ester hydrolase activity
TQ38_RS23320	COG2211	Major facilitator Superfamily
TQ38_RS23340	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS23350	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TQ38_RS23390	COG4771	TonB-dependent receptor
TQ38_RS23395	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS23400	COG1335	isochorismatase
TQ38_RS23405	COG0066	3-isopropylmalate dehydratase activity
TQ38_RS23410	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
TQ38_RS23415	COG2267	carboxylic ester hydrolase activity
TQ38_RS23435	COG2267	carboxylic ester hydrolase activity
TQ38_RS23440	COG1231	oxidoreductase activity
TQ38_RS23450	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TQ38_RS23455	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS23460	COG1414	Transcriptional regulator
TQ38_RS23465	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
TQ38_RS23475	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
TQ38_RS23485	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS23505	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
TQ38_RS23515	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
TQ38_RS23520	COG2130	NADP-dependent
TQ38_RS23530	COG1053	succinate dehydrogenase
TQ38_RS23530	COG3976	FMN-binding domain protein
TQ38_RS23550	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS23585	COG2814	Major facilitator Superfamily
TQ38_RS23595	COG2814	Major facilitator Superfamily
TQ38_RS23620	COG1335	isochorismatase
TQ38_RS23625	COG4774	siderophore transport
TQ38_RS23645	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS23650	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS23660	COG1760	l-serine dehydratase
TQ38_RS23695	COG0667	Aldo Keto reductase
TQ38_RS23710	COG1472	Belongs to the glycosyl hydrolase 3 family
TQ38_RS23715	COG0475	glutathione-regulated potassium exporter activity
TQ38_RS23720	COG1472	Belongs to the glycosyl hydrolase 3 family
TQ38_RS23730	COG4773	Receptor
TQ38_RS23740	COG1609	Transcriptional regulator
TQ38_RS23745	COG0477	Major facilitator Superfamily
TQ38_RS23750	COG1595	DNA-templated transcription, initiation
TQ38_RS23775	COG1505	serine-type exopeptidase activity
TQ38_RS23785	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
TQ38_RS23785	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
TQ38_RS23815	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
TQ38_RS23855	COG1741	Belongs to the pirin family
TQ38_RS23890	COG2205	protein histidine kinase activity
TQ38_RS23915	COG2186	Transcriptional regulator
TQ38_RS23935	COG2271	Major facilitator Superfamily
TQ38_RS23985	COG1506	peptidase
TQ38_RS23985	COG4946	Tricorn protease homolog
TQ38_RS23985	COG0823	Involved in the tonB-independent uptake of proteins
TQ38_RS23990	COG2186	Transcriptional regulator
TQ38_RS24005	COG3507	Belongs to the glycosyl hydrolase 43 family
TQ38_RS24020	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TQ38_RS24025	COG3938	Belongs to the proline racemase family
TQ38_RS24030	COG3345	alpha-galactosidase
TQ38_RS24035	COG0531	amino acid
TQ38_RS24055	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
TQ38_RS24060	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
TQ38_RS24065	COG1609	Transcriptional regulator
TQ38_RS24070	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
TQ38_RS24070	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
TQ38_RS24075	COG1105	Belongs to the carbohydrate kinase PfkB family
TQ38_RS24080	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
TQ38_RS24080	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
TQ38_RS24085	COG3659	wide pore channel activity
TQ38_RS24090	COG2721	sulfolactate sulfo-lyase activity
TQ38_RS24095	COG1904	glucuronate isomerase
TQ38_RS24100	COG0246	Mannitol dehydrogenase
TQ38_RS24105	COG1609	Transcriptional regulator
TQ38_RS24110	COG3507	Belongs to the glycosyl hydrolase 43 family
TQ38_RS24125	COG0583	DNA-binding transcription factor activity
TQ38_RS24140	COG2252	PERMEase
TQ38_RS24145	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
TQ38_RS24170	COG2272	Belongs to the type-B carboxylesterase lipase family
TQ38_RS24180	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS24185	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
TQ38_RS24190	COG1609	Transcriptional regulator
TQ38_RS24200	COG2271	Major facilitator Superfamily
TQ38_RS24220	COG2271	Major facilitator Superfamily
TQ38_RS24230	COG0583	DNA-binding transcription factor activity
TQ38_RS24235	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TQ38_RS24280	COG4191	Histidine kinase
TQ38_RS24280	COG0784	Response regulator, receiver
TQ38_RS24285	COG3237	CsbD-like
TQ38_RS24295	COG0583	DNA-binding transcription factor activity
TQ38_RS24300	COG1024	Enoyl-CoA hydratase
TQ38_RS24305	COG1902	pentaerythritol trinitrate reductase activity
TQ38_RS24315	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS24345	COG0583	DNA-binding transcription factor activity
TQ38_RS24350	COG2267	carboxylic ester hydrolase activity
TQ38_RS24355	COG0477	Major facilitator Superfamily
TQ38_RS24365	COG4638	Rieske (2fe-2S)
TQ38_RS24370	COG4771	TonB-dependent receptor
TQ38_RS24385	COG2130	NADP-dependent
TQ38_RS24405	COG0583	DNA-binding transcription factor activity
TQ38_RS24410	COG0596	Alpha beta hydrolase
TQ38_RS24450	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS24470	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS24480	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS24510	COG1024	Enoyl-CoA hydratase
TQ38_RS24515	COG0183	Belongs to the thiolase family
TQ38_RS24535	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS24545	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS24555	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS24590	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS24600	COG1846	Transcriptional regulator
TQ38_RS24610	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
TQ38_RS24610	COG1017	nitric oxide dioxygenase activity
TQ38_RS24635	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
TQ38_RS24650	COG3119	arylsulfatase activity
TQ38_RS24655	COG3706	GGDEF domain
TQ38_RS24660	COG0667	Aldo Keto reductase
TQ38_RS24675	COG2133	pyrroloquinoline quinone binding
TQ38_RS24685	COG1940	carbohydrate kinase activity
TQ38_RS24690	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
TQ38_RS24695	COG0418	dihydroorotase activity
TQ38_RS24700	COG1994	Peptidase M50
TQ38_RS24710	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ38_RS24730	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
TQ38_RS24735	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS24740	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS24745	COG0823	Involved in the tonB-independent uptake of proteins
TQ38_RS24745	COG1506	peptidase
TQ38_RS24780	COG3193	protein, possibly involved in utilization of glycolate and propanediol
TQ38_RS24815	COG4774	siderophore transport
TQ38_RS24835	COG4771	TonB-dependent receptor
TQ38_RS24865	COG0024	Methionine aminopeptidase
TQ38_RS24870	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
TQ38_RS24875	COG0022	dehydrogenase e1 component
TQ38_RS24880	COG0508	dehydrogenase complex catalyzes the overall conversion of
TQ38_RS24885	COG4993	Dehydrogenase
TQ38_RS24890	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
TQ38_RS24900	COG2205	protein histidine kinase activity
TQ38_RS24905	COG0745	RESPONSE REGULATOR receiver
TQ38_RS24920	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
TQ38_RS24970	COG0438	transferase activity, transferring glycosyl groups
TQ38_RS24985	COG0438	transferase activity, transferring glycosyl groups
TQ38_RS24995	COG0025	NhaP-type Na H and K H
TQ38_RS25010	COG0667	Aldo Keto reductase
TQ38_RS25030	COG2159	amidohydrolase
TQ38_RS25040	COG0583	DNA-binding transcription factor activity
TQ38_RS25045	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
TQ38_RS25055	COG3618	amidohydrolase
TQ38_RS25075	COG1741	Belongs to the pirin family
TQ38_RS25080	COG0583	DNA-binding transcription factor activity
TQ38_RS25085	COG1741	Belongs to the pirin family
TQ38_RS25100	COG0477	Major facilitator Superfamily
TQ38_RS25110	COG1278	Cold shock
TQ38_RS25125	COG2188	Transcriptional regulator
TQ38_RS25130	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
TQ38_RS25140	COG4206	TonB-dependent receptor
TQ38_RS25145	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
TQ38_RS25155	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
TQ38_RS25160	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
TQ38_RS25170	COG0277	FAD linked oxidase domain protein
TQ38_RS25175	COG2971	BadF BadG BcrA BcrD
TQ38_RS25215	COG3022	response to hydroperoxide
TQ38_RS25225	COG0306	phosphate transporter
TQ38_RS25230	COG4771	TonB-dependent receptor
TQ38_RS25235	COG1902	pentaerythritol trinitrate reductase activity
TQ38_RS25265	COG2205	protein histidine kinase activity
TQ38_RS25270	COG0745	RESPONSE REGULATOR receiver
TQ38_RS25290	COG4993	Dehydrogenase
TQ38_RS25295	COG4771	TonB-dependent receptor
TQ38_RS25325	COG3328	transposase activity
TQ38_RS25380	COG0438	transferase activity, transferring glycosyl groups
TQ38_RS25385	COG0438	transferase activity, transferring glycosyl groups
TQ38_RS25425	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
TQ38_RS25445	COG0489	protein tyrosine kinase activity
TQ38_RS25460	COG0730	response to heat
TQ38_RS25525	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
TQ38_RS25555	COG1574	metal-dependent hydrolase with the TIM-barrel fold
TQ38_RS25590	COG2853	Lipoprotein
TQ38_RS25595	COG2205	protein histidine kinase activity
TQ38_RS25605	COG0745	RESPONSE REGULATOR receiver
TQ38_RS25660	COG1733	regulation of RNA biosynthetic process
TQ38_RS25665	COG0024	Methionine aminopeptidase
TQ38_RS25675	COG0584	glycerophosphoryl diester phosphodiesterase
TQ38_RS25705	COG3328	transposase activity
TQ38_RS25710	COG1802	Transcriptional regulator
TQ38_RS25715	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ38_RS25720	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
TQ38_RS25725	COG1335	isochorismatase
TQ38_RS25740	COG0800	Aldolase
TQ38_RS25745	COG3734	2-keto-3-deoxy-galactonokinase
TQ38_RS25760	COG2244	polysaccharide biosynthetic process
TQ38_RS25765	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
TQ38_RS25770	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
TQ38_RS25815	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS25830	COG0071	Belongs to the small heat shock protein (HSP20) family
TQ38_RS25835	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
TQ38_RS25900	COG0297	glycogen (starch) synthase activity
TQ38_RS25905	COG0753	catalase activity
TQ38_RS25925	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
TQ38_RS25960	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
TQ38_RS25970	COG0123	including yeast histone deacetylase and acetoin utilization protein
TQ38_RS25975	COG0326	Molecular chaperone. Has ATPase activity
TQ38_RS26015	COG2267	carboxylic ester hydrolase activity
TQ38_RS26025	COG4957	zinc ion binding
TQ38_RS26060	COG0784	Response regulator, receiver
TQ38_RS26065	COG0745	RESPONSE REGULATOR receiver
TQ38_RS26085	COG3436	PFAM IS66 Orf2 family protein
TQ38_RS26090	COG2963	transposase activity
TQ38_RS26140	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
TQ38_RS26240	COG3547	Transposase (IS116 IS110 IS902 family)
TQ38_RS26255	COG0776	regulation of translation
TQ38_RS26260	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
TQ38_RS26325	COG0776	regulation of translation
TQ38_RS26350	COG1472	Belongs to the glycosyl hydrolase 3 family
TQ38_RS26370	COG0277	FAD linked oxidase domain protein
TQ38_RS26380	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ38_RS26390	COG2211	Major facilitator Superfamily
TQ38_RS26400	COG0823	Involved in the tonB-independent uptake of proteins
TQ38_RS26420	COG4771	TonB-dependent receptor
TQ38_RS26455	COG2272	Belongs to the type-B carboxylesterase lipase family
TQ38_RS26460	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
TQ38_RS26490	COG3344	reverse transcriptase
TQ38_RS26515	COG2205	protein histidine kinase activity
TQ38_RS26520	COG0745	RESPONSE REGULATOR receiver
TQ38_RS26530	COG1968	undecaprenyl-diphosphatase activity
TQ38_RS26535	COG0586	Pfam SNARE associated Golgi protein
TQ38_RS26540	COG1253	flavin adenine dinucleotide binding
TQ38_RS26595	COG1192	Involved in chromosome partitioning
TQ38_RS26610	COG1484	DNA-dependent DNA replication
TQ38_RS26615	COG4584	PFAM Integrase catalytic
TQ38_RS26630	COG4191	Histidine kinase
TQ38_RS26635	COG4566	intracellular signal transduction
TQ38_RS26645	COG0583	DNA-binding transcription factor activity
TQ38_RS26750	COG0640	Transcriptional regulator
TQ38_RS26755	COG1309	transcriptional regulator
TQ38_RS26760	COG0318	PFAM AMP-dependent synthetase and ligase
TQ38_RS26775	COG4771	TonB-dependent receptor
TQ38_RS26795	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
TQ38_RS26810	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
TQ38_RS26870	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
TQ38_RS26880	COG3800	Transcriptional regulator
TQ38_RS26880	COG1396	sequence-specific DNA binding
TQ38_RS26915	COG0823	Involved in the tonB-independent uptake of proteins
TQ38_RS26915	COG1506	peptidase
TQ38_RS26920	COG0367	asparagine synthase
TQ38_RS26955	COG4227	nucleotidyltransferase activity
TQ38_RS26965	COG1475	DNA binding
TQ38_RS27020	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
TQ38_RS27060	COG1053	succinate dehydrogenase
TQ38_RS27070	COG4774	siderophore transport
TQ38_RS27110	COG0673	inositol 2-dehydrogenase activity
TQ38_RS27130	COG1063	alcohol dehydrogenase
TQ38_RS27140	COG1902	pentaerythritol trinitrate reductase activity
TQ38_RS27160	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
TQ38_RS27190	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS27195	COG0183	Belongs to the thiolase family
TQ38_RS27210	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS27215	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS27220	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS27240	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS27245	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS27250	COG1024	Enoyl-CoA hydratase
TQ38_RS27260	COG1024	Enoyl-CoA hydratase
TQ38_RS27275	COG0346	lactoylglutathione lyase activity
TQ38_RS27280	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS27300	COG4569	acetaldehyde dehydrogenase (acetylating) activity
TQ38_RS27305	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
TQ38_RS27325	COG0656	L-ascorbic acid biosynthetic process
TQ38_RS27345	COG2084	Dehydrogenase
TQ38_RS27355	COG1024	Enoyl-CoA hydratase
TQ38_RS27360	COG0583	DNA-binding transcription factor activity
TQ38_RS27365	COG1960	acyl-CoA dehydrogenase activity
TQ38_RS27390	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS27440	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS27445	COG0300	oxidoreductase activity
TQ38_RS27480	COG2124	cytochrome p450
TQ38_RS27495	COG1024	Enoyl-CoA hydratase
TQ38_RS27505	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS27525	COG0183	Belongs to the thiolase family
TQ38_RS27540	COG1309	transcriptional regulator
TQ38_RS27545	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS27550	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS27560	COG1309	transcriptional regulator
TQ38_RS27580	COG1349	DNA-binding transcription factor activity
TQ38_RS27590	COG1304	FMN binding
TQ38_RS27600	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS27600	COG3347	Dehydrogenase
TQ38_RS27605	COG4952	isomerase
TQ38_RS27620	COG3547	Transposase (IS116 IS110 IS902 family)
TQ38_RS27650	COG4771	TonB-dependent receptor
TQ38_RS27670	COG4372	Transposase
TQ38_RS27675	COG3436	PFAM IS66 Orf2 family protein
TQ38_RS27685	COG1309	transcriptional regulator
TQ38_RS27690	COG2072	flavoprotein involved in K transport
TQ38_RS27710	COG2433	Pfam Transposase IS66
TQ38_RS27715	COG3436	PFAM IS66 Orf2 family protein
TQ38_RS27765	COG1271	oxidase subunit
TQ38_RS27780	COG0753	catalase activity
TQ38_RS27805	COG4566	intracellular signal transduction
TQ38_RS27830	COG1012	belongs to the aldehyde dehydrogenase family
TQ38_RS27835	COG0667	Aldo Keto reductase
TQ38_RS27855	COG4566	intracellular signal transduction
TQ38_RS27870	COG1529	Aldehyde oxidase and xanthine dehydrogenase
TQ38_RS27870	COG2010	Cytochrome c
TQ38_RS27885	COG3059	membrane
TQ38_RS27890	COG0156	8-amino-7-oxononanoate synthase activity
TQ38_RS27910	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
TQ38_RS27920	COG4221	oxidoreductase activity
TQ38_RS27930	COG4566	intracellular signal transduction
TQ38_RS27935	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TQ38_RS27945	COG0596	Alpha beta hydrolase
TQ38_RS27945	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TQ38_RS27945	COG2226	methyltransferase
TQ38_RS27955	COG1733	regulation of RNA biosynthetic process
TQ38_RS27985	COG4191	Histidine kinase
TQ38_RS28000	COG1733	regulation of RNA biosynthetic process
TQ38_RS28005	COG0604	alcohol dehydrogenase
TQ38_RS28025	COG4191	Histidine kinase
TQ38_RS28105	COG4206	TonB-dependent receptor
TQ38_RS28115	COG0667	Aldo Keto reductase
TQ38_RS28120	COG0183	Belongs to the thiolase family
TQ38_RS28125	COG0534	Mate efflux family protein
TQ38_RS28140	COG2267	carboxylic ester hydrolase activity
TQ38_RS28145	COG0776	regulation of translation
TQ38_RS28195	COG0582	viral genome integration into host DNA
TQ38_RS28380	COG3618	amidohydrolase
TQ38_RS28390	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
TQ38_RS28405	COG2159	amidohydrolase
TQ38_RS28465	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
TQ38_RS28495	COG4771	TonB-dependent receptor
TQ38_RS28515	COG0431	NADPH-dependent FMN reductase
TQ38_RS28540	COG4584	PFAM Integrase catalytic
TQ38_RS28550	COG3321	synthase
TQ38_RS28550	COG0604	alcohol dehydrogenase
TQ38_RS28550	COG1028	Short-chain dehydrogenase reductase Sdr
TQ38_RS28560	COG3622	Belongs to the hyi family
TQ38_RS28595	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
TQ38_RS28610	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TQ38_RS28615	COG0583	DNA-binding transcription factor activity
TQ38_RS28620	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
TQ38_RS28635	COG0673	inositol 2-dehydrogenase activity
TQ38_RS28660	COG3940	Belongs to the glycosyl hydrolase 43 family
TQ38_RS28675	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
TQ38_RS28680	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
TQ38_RS28695	COG4771	TonB-dependent receptor
TQ38_RS28735	COG3547	Transposase (IS116 IS110 IS902 family)
TQ38_RS28740	COG0038	chloride channel
TQ38_RS28770	COG4638	Rieske (2fe-2S)
TQ38_RS28795	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
TQ38_RS28805	COG4957	zinc ion binding
TQ38_RS28810	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
TQ38_RS28830	COG1017	nitric oxide dioxygenase activity
TQ38_RS28830	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
TQ38_RS28875	COG4957	zinc ion binding
TQ38_RS28880	COG3920	Histidine kinase
TQ38_RS28880	COG2202	Pas domain
TQ38_RS28885	COG0071	Belongs to the small heat shock protein (HSP20) family
TQ38_RS28930	COG4943	cyclic-guanylate-specific phosphodiesterase activity
TQ38_RS29020	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
TQ38_RS29020	COG0662	Cupin 2, conserved barrel domain protein
TQ38_RS29030	COG1482	cell wall glycoprotein biosynthetic process
TQ38_RS29040	COG3093	addiction module antidote protein HigA
TQ38_RS29140	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
TQ38_RS29145	COG0297	glycogen (starch) synthase activity
TQ38_RS29160	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
TQ38_RS29185	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
TQ38_RS29210	COG2433	Pfam Transposase IS66
TQ38_RS29215	COG3436	PFAM IS66 Orf2 family protein
TQ38_RS29220	COG2963	transposase activity
TQ38_RS29235	COG0438	transferase activity, transferring glycosyl groups
TQ38_RS29265	COG0812	UDP-N-acetylmuramate dehydrogenase activity
TQ38_RS29270	COG0110	maltose O-acetyltransferase activity
TQ38_RS29285	COG3385	transposase activity
TQ38_RS29355	COG2877	3-deoxy-8-phosphooctulonate synthase activity
TQ38_RS29395	COG1216	Glycosyl transferase, family 2
TQ38_RS29395	COG0438	transferase activity, transferring glycosyl groups
TQ38_RS29400	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
TQ38_RS29405	COG0517	IMP dehydrogenase activity
TQ38_RS29405	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
TQ38_RS29410	COG0483	inositol monophosphate 1-phosphatase activity
TQ38_RS29425	COG0300	oxidoreductase activity
TQ38_RS29485	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
TQ38_RS29490	COG3177	Filamentation induced by cAMP protein fic
TQ38_RS29495	COG3300	MHYT domain
TQ38_RS29495	COG5001	Diguanylate cyclase
TQ38_RS29500	COG5001	Diguanylate cyclase
TQ38_RS29575	COG4191	Histidine kinase
TQ38_RS29585	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
TQ38_RS29585	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
TQ38_RS29695	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
TQ38_RS29710	COG3436	PFAM IS66 Orf2 family protein
TQ38_RS29775	COG2337	Toxic component of a toxin-antitoxin (TA) module
TQ38_RS29805	COG0776	regulation of translation
TQ38_RS29820	COG0596	Alpha beta hydrolase