locus-tag	class	description
PJDR2_RS00010	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PJDR2_RS00015	COG0592	DNA-directed DNA polymerase activity
PJDR2_RS00020	COG2501	S4 domain
PJDR2_RS00025	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PJDR2_RS00035	COG0187	DNA topoisomerase II activity
PJDR2_RS00045	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PJDR2_RS00050	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
PJDR2_RS00085	COG1982	Orn Lys Arg decarboxylase major
PJDR2_RS00090	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PJDR2_RS00095	COG3870	Protein conserved in bacteria
PJDR2_RS00100	COG1728	Protein conserved in bacteria
PJDR2_RS00105	COG0470	DNA polymerase III
PJDR2_RS00110	COG1774	PSP1 C-terminal conserved region
PJDR2_RS00115	COG4467	Involved in initiation control of chromosome replication
PJDR2_RS00120	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
PJDR2_RS00125	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PJDR2_RS00130	COG2002	toxin-antitoxin pair type II binding
PJDR2_RS00135	COG1078	dGTPase activity
PJDR2_RS00140	COG0084	hydrolase, TatD family'
PJDR2_RS00145	COG3584	3D domain protein
PJDR2_RS00145	COG3583	domain protein
PJDR2_RS00155	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
PJDR2_RS00165	COG4466	Protein conserved in bacteria
PJDR2_RS00175	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PJDR2_RS00180	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PJDR2_RS00185	COG0251	oxidation-reduction process
PJDR2_RS00190	COG2088	sporulation resulting in formation of a cellular spore
PJDR2_RS00195	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PJDR2_RS00200	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PJDR2_RS00205	COG0193	aminoacyl-tRNA hydrolase activity
PJDR2_RS00215	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PJDR2_RS00235	COG2002	toxin-antitoxin pair type II binding
PJDR2_RS00245	COG1486	melibiose metabolic process
PJDR2_RS00255	COG1929	Belongs to the glycerate kinase type-1 family
PJDR2_RS00260	COG3956	TIGRFAM MazG family protein
PJDR2_RS00270	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
PJDR2_RS00280	COG3739	integral membrane protein
PJDR2_RS00300	COG1098	S1 RNA binding domain
PJDR2_RS00305	COG2208	phosphoserine phosphatase activity
PJDR2_RS00310	COG2304	oxidoreductase activity
PJDR2_RS00315	COG0515	serine threonine protein kinase
PJDR2_RS00320	COG0037	tRNA processing
PJDR2_RS00330	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PJDR2_RS00335	COG1744	ABC transporter substrate-binding protein PnrA-like
PJDR2_RS00340	COG3845	ABC transporter
PJDR2_RS00345	COG4603	Belongs to the binding-protein-dependent transport system permease family
PJDR2_RS00350	COG1079	Belongs to the binding-protein-dependent transport system permease family
PJDR2_RS00355	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PJDR2_RS00360	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
PJDR2_RS00365	COG0157	Belongs to the NadC ModD family
PJDR2_RS00370	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PJDR2_RS00375	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PJDR2_RS00380	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
PJDR2_RS00385	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
PJDR2_RS00390	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PJDR2_RS00395	COG0512	Glutamine amidotransferase of anthranilate synthase
PJDR2_RS00400	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
PJDR2_RS00405	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PJDR2_RS00410	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PJDR2_RS00415	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PJDR2_RS00420	COG1396	sequence-specific DNA binding
PJDR2_RS00425	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PJDR2_RS00430	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
PJDR2_RS00435	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
PJDR2_RS00445	COG0463	Glycosyl transferase, family 2
PJDR2_RS00450	COG2246	polysaccharide biosynthetic process
PJDR2_RS00485	COG0516	GMP reductase activity
PJDR2_RS00485	COG0517	IMP dehydrogenase activity
PJDR2_RS00505	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PJDR2_RS00530	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
PJDR2_RS00535	COG3209	COG3209 Rhs family protein
PJDR2_RS00550	COG2011	ABC-type metal ion transport system permease component
PJDR2_RS00580	COG0590	tRNA wobble adenosine to inosine editing
PJDR2_RS00585	COG4191	Histidine kinase
PJDR2_RS00590	COG0702	epimerase
PJDR2_RS00595	COG1187	pseudouridine synthase activity
PJDR2_RS00600	COG1360	Flagellar Motor Protein
PJDR2_RS00605	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
PJDR2_RS00615	COG2200	EAL domain
PJDR2_RS00630	COG0791	NLP P60 protein
PJDR2_RS00650	COG1595	DNA-templated transcription, initiation
PJDR2_RS00670	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PJDR2_RS00685	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PJDR2_RS00700	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PJDR2_RS00705	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PJDR2_RS00720	COG0018	arginyl-trna synthetase
PJDR2_RS00725	COG1404	Belongs to the peptidase S8 family
PJDR2_RS00730	COG3343	RNA polymerase activity
PJDR2_RS00735	COG0504	CTP synthase activity
PJDR2_RS00745	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PJDR2_RS00750	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PJDR2_RS00760	COG0254	rRNA binding
PJDR2_RS00770	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PJDR2_RS00775	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PJDR2_RS00780	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PJDR2_RS00840	COG0431	NADPH-dependent FMN reductase
PJDR2_RS00845	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PJDR2_RS00850	COG2508	Transcriptional regulator
PJDR2_RS00855	COG3842	ATPase activity
PJDR2_RS00860	COG1595	DNA-templated transcription, initiation
PJDR2_RS00870	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PJDR2_RS00880	COG0546	phosphoglycolate phosphatase activity
PJDR2_RS00885	COG0110	maltose O-acetyltransferase activity
PJDR2_RS00890	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PJDR2_RS00895	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
PJDR2_RS00900	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PJDR2_RS00905	COG0131	Imidazoleglycerol-phosphate dehydratase
PJDR2_RS00910	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PJDR2_RS00915	COG0107	imidazoleglycerol-phosphate synthase activity
PJDR2_RS00920	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PJDR2_RS00920	COG0140	phosphoribosyl-ATP diphosphatase activity
PJDR2_RS00925	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
PJDR2_RS00935	COG0457	Tetratricopeptide repeat
PJDR2_RS00945	COG1940	carbohydrate kinase activity
PJDR2_RS00950	COG1660	Displays ATPase and GTPase activities
PJDR2_RS00955	COG0391	Required for morphogenesis under gluconeogenic growth conditions
PJDR2_RS00960	COG1481	regulation of sporulation
PJDR2_RS00965	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
PJDR2_RS00970	COG0740	serine-type endopeptidase activity
PJDR2_RS00990	COG0126	phosphoglycerate kinase activity
PJDR2_RS00995	COG0149	triose-phosphate isomerase activity
PJDR2_RS01000	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PJDR2_RS01005	COG0148	phosphopyruvate hydratase activity
PJDR2_RS01010	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
PJDR2_RS01015	COG0557	exoribonuclease II activity
PJDR2_RS01020	COG1278	Cold shock
PJDR2_RS01025	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PJDR2_RS01110	COG3275	phosphorelay sensor kinase activity
PJDR2_RS01115	COG4753	response regulator
PJDR2_RS01115	COG2207	Transcriptional regulator
PJDR2_RS01130	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS01165	COG1361	Conserved repeat domain
PJDR2_RS01165	COG2911	Protein conserved in bacteria
PJDR2_RS01165	COG3266	domain, Protein
PJDR2_RS01170	COG2205	protein histidine kinase activity
PJDR2_RS01185	COG4209	transmembrane transport
PJDR2_RS01190	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS01205	COG2207	Transcriptional regulator
PJDR2_RS01210	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS01215	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS01220	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS01225	COG2814	Major facilitator Superfamily
PJDR2_RS01230	COG1309	transcriptional regulator
PJDR2_RS01235	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PJDR2_RS01250	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS01255	COG0546	phosphoglycolate phosphatase activity
PJDR2_RS01260	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
PJDR2_RS01265	COG1349	DNA-binding transcription factor activity
PJDR2_RS01275	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PJDR2_RS01285	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS01290	COG0477	Major facilitator Superfamily
PJDR2_RS01295	COG2363	Small membrane protein
PJDR2_RS01305	COG1522	sequence-specific DNA binding
PJDR2_RS01320	COG1472	Belongs to the glycosyl hydrolase 3 family
PJDR2_RS01330	COG0840	transmembrane signaling receptor activity
PJDR2_RS01345	COG0583	DNA-binding transcription factor activity
PJDR2_RS01350	COG2814	Major facilitator Superfamily
PJDR2_RS01355	COG1733	regulation of RNA biosynthetic process
PJDR2_RS01360	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PJDR2_RS01365	COG1733	regulation of RNA biosynthetic process
PJDR2_RS01380	COG0583	DNA-binding transcription factor activity
PJDR2_RS01395	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS01400	COG5002	protein histidine kinase activity
PJDR2_RS01410	COG0463	Glycosyl transferase, family 2
PJDR2_RS01415	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
PJDR2_RS01430	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS01435	COG3708	Transcriptional regulator
PJDR2_RS01435	COG2207	Transcriptional regulator
PJDR2_RS01440	COG4989	oxidoreductase activity
PJDR2_RS01445	COG4667	esterase of the alpha-beta hydrolase superfamily
PJDR2_RS01480	COG4608	Belongs to the ABC transporter superfamily
PJDR2_RS01485	COG0444	Belongs to the ABC transporter superfamily
PJDR2_RS01490	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PJDR2_RS01510	COG4565	transcriptional regulatory protein
PJDR2_RS01515	COG2972	Histidine kinase
PJDR2_RS01520	COG4209	transmembrane transport
PJDR2_RS01525	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS01530	COG1653	transport
PJDR2_RS01540	COG0640	Transcriptional regulator
PJDR2_RS01555	COG0154	amidase activity
PJDR2_RS01565	COG1959	2 iron, 2 sulfur cluster binding
PJDR2_RS01590	COG1178	ABC-type Fe3 transport system permease component
PJDR2_RS01630	COG1061	Type III restriction enzyme res subunit
PJDR2_RS01635	COG0494	nUDIX hydrolase
PJDR2_RS01650	COG3408	Glycogen debranching enzyme
PJDR2_RS01660	COG0084	hydrolase, TatD family'
PJDR2_RS01675	COG1278	Cold shock
PJDR2_RS01690	COG0697	spore germination
PJDR2_RS01695	COG0583	DNA-binding transcription factor activity
PJDR2_RS01745	COG1472	Belongs to the glycosyl hydrolase 3 family
PJDR2_RS01750	COG0531	amino acid
PJDR2_RS01765	COG0656	L-ascorbic acid biosynthetic process
PJDR2_RS01770	COG2814	Major facilitator Superfamily
PJDR2_RS01775	COG1733	regulation of RNA biosynthetic process
PJDR2_RS01790	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PJDR2_RS01795	COG1011	Hydrolase
PJDR2_RS01800	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PJDR2_RS01825	COG1312	Catalyzes the dehydration of D-mannonate
PJDR2_RS01830	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS01835	COG0667	Aldo Keto reductase
PJDR2_RS01865	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS01875	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
PJDR2_RS01880	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PJDR2_RS01890	COG2706	6-phosphogluconolactonase activity
PJDR2_RS01900	COG1309	transcriptional regulator
PJDR2_RS01905	COG0477	Major facilitator Superfamily
PJDR2_RS01915	COG3944	biosynthesis protein
PJDR2_RS01920	COG0489	protein tyrosine kinase activity
PJDR2_RS01925	COG1086	Polysaccharide biosynthesis protein
PJDR2_RS01940	COG0438	transferase activity, transferring glycosyl groups
PJDR2_RS01950	COG0110	maltose O-acetyltransferase activity
PJDR2_RS01965	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
PJDR2_RS01975	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PJDR2_RS01980	COG1210	Utp--glucose-1-phosphate uridylyltransferase
PJDR2_RS01985	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PJDR2_RS02005	COG1595	DNA-templated transcription, initiation
PJDR2_RS02020	COG2267	carboxylic ester hydrolase activity
PJDR2_RS02025	COG1522	sequence-specific DNA binding
PJDR2_RS02030	COG0492	ferredoxin-NADP+ reductase activity
PJDR2_RS02050	COG2267	carboxylic ester hydrolase activity
PJDR2_RS02065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS02070	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS02075	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
PJDR2_RS02080	COG2207	Transcriptional regulator
PJDR2_RS02080	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS02090	COG1175	transmembrane transport
PJDR2_RS02095	COG2972	Histidine kinase
PJDR2_RS02100	COG4753	response regulator
PJDR2_RS02100	COG2207	Transcriptional regulator
PJDR2_RS02130	COG3842	ATPase activity
PJDR2_RS02135	COG1176	ABC-type spermidine putrescine transport system, permease component I
PJDR2_RS02140	COG1177	transmembrane transport
PJDR2_RS02145	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
PJDR2_RS02155	COG3944	biosynthesis protein
PJDR2_RS02160	COG0489	protein tyrosine kinase activity
PJDR2_RS02165	COG1210	Utp--glucose-1-phosphate uridylyltransferase
PJDR2_RS02170	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
PJDR2_RS02175	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
PJDR2_RS02180	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PJDR2_RS02190	COG0110	maltose O-acetyltransferase activity
PJDR2_RS02200	COG1215	transferase activity, transferring glycosyl groups
PJDR2_RS02230	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PJDR2_RS02250	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PJDR2_RS02260	COG0534	Mate efflux family protein
PJDR2_RS02265	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PJDR2_RS02270	COG1132	(ABC) transporter
PJDR2_RS02300	COG2972	Histidine kinase
PJDR2_RS02305	COG4753	response regulator
PJDR2_RS02305	COG2207	Transcriptional regulator
PJDR2_RS02310	COG1653	transport
PJDR2_RS02315	COG4209	transmembrane transport
PJDR2_RS02320	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS02335	COG2814	Major facilitator Superfamily
PJDR2_RS02340	COG0737	Belongs to the 5'-nucleotidase family
PJDR2_RS02345	COG2390	Transcriptional regulator
PJDR2_RS02350	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PJDR2_RS02355	COG0659	secondary active sulfate transmembrane transporter activity
PJDR2_RS02385	COG0667	Aldo Keto reductase
PJDR2_RS02395	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PJDR2_RS02395	COG0456	acetyltransferase
PJDR2_RS02405	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS02410	COG3300	MHYT domain
PJDR2_RS02410	COG5001	Diguanylate cyclase
PJDR2_RS02440	COG2032	superoxide dismutase activity
PJDR2_RS02450	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
PJDR2_RS02460	COG4326	sporulation control protein
PJDR2_RS02475	COG0398	Pfam SNARE associated Golgi protein
PJDR2_RS02480	COG2814	Major facilitator Superfamily
PJDR2_RS02490	COG0667	Aldo Keto reductase
PJDR2_RS02495	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PJDR2_RS02515	COG4209	transmembrane transport
PJDR2_RS02520	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS02530	COG3250	beta-galactosidase activity
PJDR2_RS02550	COG2207	Transcriptional regulator
PJDR2_RS02565	COG0716	FMN binding
PJDR2_RS02590	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
PJDR2_RS02595	COG2086	electron transfer activity
PJDR2_RS02600	COG2181	nitrate reductase activity
PJDR2_RS02600	COG0247	lactate metabolic process
PJDR2_RS02605	COG1250	3-hydroxyacyl-CoA dehydrogenase
PJDR2_RS02605	COG1024	Enoyl-CoA hydratase
PJDR2_RS02610	COG0183	Belongs to the thiolase family
PJDR2_RS02615	COG1960	acyl-CoA dehydrogenase activity
PJDR2_RS02620	COG0318	PFAM AMP-dependent synthetase and ligase
PJDR2_RS02645	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS02650	COG5002	protein histidine kinase activity
PJDR2_RS02670	COG1476	TRANSCRIPTIONal
PJDR2_RS02750	COG3979	chitinase
PJDR2_RS02765	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS02770	COG4209	transmembrane transport
PJDR2_RS02775	COG1609	Transcriptional regulator
PJDR2_RS02805	COG0154	amidase activity
PJDR2_RS02810	COG1595	DNA-templated transcription, initiation
PJDR2_RS02820	COG1408	metallophosphoesterase
PJDR2_RS02825	COG3708	Transcriptional regulator
PJDR2_RS02825	COG2207	Transcriptional regulator
PJDR2_RS02840	COG3103	Sh3 type 3 domain protein
PJDR2_RS02840	COG0366	Alpha amylase catalytic
PJDR2_RS02845	COG2197	response regulator
PJDR2_RS02850	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PJDR2_RS02855	COG1349	DNA-binding transcription factor activity
PJDR2_RS02880	COG0697	spore germination
PJDR2_RS02885	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PJDR2_RS02895	COG3119	arylsulfatase activity
PJDR2_RS02900	COG0668	transmembrane transport
PJDR2_RS02915	COG0657	acetylesterase activity
PJDR2_RS02920	COG1733	regulation of RNA biosynthetic process
PJDR2_RS02925	COG2378	regulation of single-species biofilm formation
PJDR2_RS02930	COG2318	DinB family
PJDR2_RS02935	COG0604	alcohol dehydrogenase
PJDR2_RS02960	COG1137	ATPase activity
PJDR2_RS02970	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS02975	COG1175	transmembrane transport
PJDR2_RS02980	COG2182	Extracellular solute-binding protein
PJDR2_RS02985	COG3459	Glycosyltransferase 36 associated
PJDR2_RS03015	COG0488	(ABC) transporter
PJDR2_RS03025	COG1846	Transcriptional regulator
PJDR2_RS03045	COG1215	transferase activity, transferring glycosyl groups
PJDR2_RS03065	COG2249	NAD(P)H dehydrogenase (quinone) activity
PJDR2_RS03080	COG3119	arylsulfatase activity
PJDR2_RS03085	COG0475	glutathione-regulated potassium exporter activity
PJDR2_RS03090	COG0490	domain, Protein
PJDR2_RS03105	COG0583	DNA-binding transcription factor activity
PJDR2_RS03110	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS03115	COG1309	transcriptional regulator
PJDR2_RS03120	COG1846	Transcriptional regulator
PJDR2_RS03140	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PJDR2_RS03140	COG4451	ribulose bisphosphate carboxylase, small
PJDR2_RS03155	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PJDR2_RS03160	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS03205	COG0583	DNA-binding transcription factor activity
PJDR2_RS03210	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PJDR2_RS03230	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PJDR2_RS03240	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
PJDR2_RS03245	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
PJDR2_RS03255	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
PJDR2_RS03275	COG2059	Chromate
PJDR2_RS03320	COG0386	Belongs to the glutathione peroxidase family
PJDR2_RS03340	COG2207	Transcriptional regulator
PJDR2_RS03340	COG3708	Transcriptional regulator
PJDR2_RS03355	COG0667	Aldo Keto reductase
PJDR2_RS03370	COG3290	protein histidine kinase activity
PJDR2_RS03380	COG1175	transmembrane transport
PJDR2_RS03385	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS03390	COG3119	arylsulfatase activity
PJDR2_RS03410	COG0667	Aldo Keto reductase
PJDR2_RS03430	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS03455	COG4213	ABC transporter substrate-binding protein
PJDR2_RS03465	COG4214	carbohydrate transport
PJDR2_RS03475	COG2972	Histidine kinase
PJDR2_RS03480	COG4753	response regulator
PJDR2_RS03480	COG2207	Transcriptional regulator
PJDR2_RS03485	COG0583	DNA-binding transcription factor activity
PJDR2_RS03510	COG3275	phosphorelay sensor kinase activity
PJDR2_RS03515	COG2207	Transcriptional regulator
PJDR2_RS03515	COG4753	response regulator
PJDR2_RS03525	COG1175	transmembrane transport
PJDR2_RS03540	COG1082	Xylose isomerase domain protein TIM barrel
PJDR2_RS03545	COG1609	Transcriptional regulator
PJDR2_RS03550	COG1653	transport
PJDR2_RS03555	COG1175	transmembrane transport
PJDR2_RS03560	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS03565	COG3940	Belongs to the glycosyl hydrolase 43 family
PJDR2_RS03575	COG2207	Transcriptional regulator
PJDR2_RS03580	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS03580	COG2972	Histidine kinase
PJDR2_RS03585	COG4209	transmembrane transport
PJDR2_RS03590	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS03595	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS03600	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS03605	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS03610	COG2207	Transcriptional regulator
PJDR2_RS03610	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS03615	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS03630	COG1309	transcriptional regulator
PJDR2_RS03635	COG1131	(ABC) transporter
PJDR2_RS03655	COG0438	transferase activity, transferring glycosyl groups
PJDR2_RS03660	COG2814	Major facilitator Superfamily
PJDR2_RS03675	COG0596	Alpha beta hydrolase
PJDR2_RS03685	COG3733	amine oxidase
PJDR2_RS03700	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PJDR2_RS03705	COG1418	mRNA catabolic process
PJDR2_RS03715	COG1131	(ABC) transporter
PJDR2_RS03720	COG0842	Transport permease protein
PJDR2_RS03725	COG4585	Histidine kinase
PJDR2_RS03730	COG2197	response regulator
PJDR2_RS03740	COG0583	DNA-binding transcription factor activity
PJDR2_RS03745	COG1942	4-Oxalocrotonate Tautomerase
PJDR2_RS03765	COG2972	Histidine kinase
PJDR2_RS03770	COG4566	intracellular signal transduction
PJDR2_RS03775	COG1653	transport
PJDR2_RS03780	COG1175	transmembrane transport
PJDR2_RS03790	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PJDR2_RS03805	COG0604	alcohol dehydrogenase
PJDR2_RS03830	COG4977	sequence-specific DNA binding
PJDR2_RS03830	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS03835	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS03840	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS03845	COG2972	Histidine kinase
PJDR2_RS03850	COG2201	protein-glutamate methylesterase activity
PJDR2_RS03855	COG4209	transmembrane transport
PJDR2_RS03860	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS03865	COG1653	transport
PJDR2_RS03870	COG5434	Belongs to the glycosyl hydrolase 28 family
PJDR2_RS03885	COG3507	Belongs to the glycosyl hydrolase 43 family
PJDR2_RS03900	COG0708	Exodeoxyribonuclease III
PJDR2_RS03905	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PJDR2_RS03920	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS03935	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PJDR2_RS03940	COG2175	clavaminate synthase activity
PJDR2_RS03955	COG0800	Aldolase
PJDR2_RS03965	COG0488	(ABC) transporter
PJDR2_RS03970	COG0179	Fumarylacetoacetate (FAA) hydrolase
PJDR2_RS03975	COG0477	Major facilitator Superfamily
PJDR2_RS03980	COG0783	Belongs to the Dps family
PJDR2_RS03985	COG1609	Transcriptional regulator
PJDR2_RS03990	COG2182	Extracellular solute-binding protein
PJDR2_RS03995	COG1175	transmembrane transport
PJDR2_RS04000	COG3833	ABC-type maltose transport systems, permease component
PJDR2_RS04015	COG4753	response regulator
PJDR2_RS04015	COG2207	Transcriptional regulator
PJDR2_RS04020	COG2972	Histidine kinase
PJDR2_RS04045	COG4948	Mandelate Racemase Muconate Lactonizing
PJDR2_RS04060	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS04065	COG5002	protein histidine kinase activity
PJDR2_RS04065	COG3850	Histidine kinase
PJDR2_RS04070	COG1210	Utp--glucose-1-phosphate uridylyltransferase
PJDR2_RS04075	COG1120	ATPase activity
PJDR2_RS04120	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PJDR2_RS04145	COG3557	Belongs to the UPF0374 family
PJDR2_RS04150	COG0681	Belongs to the peptidase S26 family
PJDR2_RS04155	COG0328	RNA-DNA hybrid ribonuclease activity
PJDR2_RS04160	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PJDR2_RS04165	COG3763	UPF0154 protein
PJDR2_RS04170	COG0302	gtp cyclohydrolase
PJDR2_RS04180	COG1414	Transcriptional regulator
PJDR2_RS04185	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PJDR2_RS04195	COG1181	Belongs to the D-alanine--D-alanine ligase family
PJDR2_RS04205	COG4294	response to UV
PJDR2_RS04210	COG0730	response to heat
PJDR2_RS04225	COG4753	response regulator
PJDR2_RS04225	COG2207	Transcriptional regulator
PJDR2_RS04225	COG2207	Transcriptional regulator
PJDR2_RS04225	COG4753	response regulator
PJDR2_RS04230	COG3275	phosphorelay sensor kinase activity
PJDR2_RS04235	COG4209	transmembrane transport
PJDR2_RS04240	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS04245	COG1653	transport
PJDR2_RS04260	COG1316	TRANSCRIPTIONal
PJDR2_RS04265	COG4555	ABC transporter
PJDR2_RS04280	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PJDR2_RS04290	COG0714	Associated with various cellular activities
PJDR2_RS04300	COG1305	Transglutaminase-like
PJDR2_RS04310	COG0518	GMP synthase (glutamine-hydrolyzing) activity
PJDR2_RS04310	COG0519	Catalyzes the synthesis of GMP from XMP
PJDR2_RS04315	COG0662	Cupin 2, conserved barrel domain protein
PJDR2_RS04315	COG2207	Transcriptional regulator
PJDR2_RS04320	COG1472	Belongs to the glycosyl hydrolase 3 family
PJDR2_RS04330	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS04335	COG5000	phosphorelay sensor kinase activity
PJDR2_RS04345	COG4209	transmembrane transport
PJDR2_RS04350	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS04355	COG1653	transport
PJDR2_RS04370	COG2169	Transcriptional regulator
PJDR2_RS04380	COG1486	melibiose metabolic process
PJDR2_RS04385	COG2252	PERMEase
PJDR2_RS04400	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PJDR2_RS04400	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PJDR2_RS04405	COG0778	Nitroreductase
PJDR2_RS04410	COG1846	Transcriptional regulator
PJDR2_RS04415	COG1846	Transcriptional regulator
PJDR2_RS04420	COG2814	Major facilitator Superfamily
PJDR2_RS04430	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PJDR2_RS04435	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PJDR2_RS04440	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PJDR2_RS04445	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
PJDR2_RS04450	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PJDR2_RS04460	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PJDR2_RS04465	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PJDR2_RS04470	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
PJDR2_RS04475	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PJDR2_RS04480	COG0138	bifunctional purine biosynthesis protein purh
PJDR2_RS04485	COG0151	Belongs to the GarS family
PJDR2_RS04495	COG1470	cell adhesion involved in biofilm formation
PJDR2_RS04500	COG1392	Phosphate transport regulator
PJDR2_RS04505	COG0306	phosphate transporter
PJDR2_RS04520	COG4496	protein, YerC YecD
PJDR2_RS04530	COG1597	lipid kinase activity
PJDR2_RS04535	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PJDR2_RS04540	COG2972	Histidine kinase
PJDR2_RS04540	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS04545	COG3279	Response regulator of the LytR AlgR family
PJDR2_RS04560	COG0697	spore germination
PJDR2_RS04585	COG1175	transmembrane transport
PJDR2_RS04595	COG2972	Histidine kinase
PJDR2_RS04615	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PJDR2_RS04620	COG2843	Capsule synthesis protein
PJDR2_RS04630	COG1132	(ABC) transporter
PJDR2_RS04635	COG1132	(ABC) transporter
PJDR2_RS04655	COG2972	Histidine kinase
PJDR2_RS04660	COG1653	transport
PJDR2_RS04665	COG4209	transmembrane transport
PJDR2_RS04670	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS04680	COG0406	alpha-ribazole phosphatase activity
PJDR2_RS04685	COG0628	permease
PJDR2_RS04695	COG0697	spore germination
PJDR2_RS04720	COG2223	nitrite transmembrane transporter activity
PJDR2_RS04735	COG3118	belongs to the thioredoxin family
PJDR2_RS04745	COG1653	transport
PJDR2_RS04750	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS04755	COG4209	transmembrane transport
PJDR2_RS04760	COG2207	Transcriptional regulator
PJDR2_RS04765	COG3420	alginic acid biosynthetic process
PJDR2_RS04770	COG0655	NAD(P)H dehydrogenase (quinone) activity
PJDR2_RS04775	COG2814	Major facilitator Superfamily
PJDR2_RS04800	COG0454	-acetyltransferase
PJDR2_RS04805	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
PJDR2_RS04825	COG3964	amidohydrolase
PJDR2_RS04845	COG2188	Transcriptional regulator
PJDR2_RS04870	COG4753	response regulator
PJDR2_RS04870	COG2207	Transcriptional regulator
PJDR2_RS04875	COG2972	Histidine kinase
PJDR2_RS04880	COG4209	transmembrane transport
PJDR2_RS04885	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS04900	COG1653	transport
PJDR2_RS04905	COG2972	Histidine kinase
PJDR2_RS04910	COG2207	Transcriptional regulator
PJDR2_RS04910	COG4753	response regulator
PJDR2_RS04920	COG1175	transmembrane transport
PJDR2_RS04925	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS04930	COG3119	arylsulfatase activity
PJDR2_RS04935	COG1262	PFAM Formylglycine-generating sulfatase enzyme
PJDR2_RS04940	COG2182	Extracellular solute-binding protein
PJDR2_RS04945	COG1175	transmembrane transport
PJDR2_RS04950	COG3833	ABC-type maltose transport systems, permease component
PJDR2_RS04960	COG1653	transport
PJDR2_RS04965	COG2972	Histidine kinase
PJDR2_RS04965	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS04970	COG4753	response regulator
PJDR2_RS04970	COG2207	Transcriptional regulator
PJDR2_RS04975	COG0697	spore germination
PJDR2_RS04980	COG0531	amino acid
PJDR2_RS05035	COG3275	phosphorelay sensor kinase activity
PJDR2_RS05040	COG2207	Transcriptional regulator
PJDR2_RS05040	COG4753	response regulator
PJDR2_RS05045	COG4213	ABC transporter substrate-binding protein
PJDR2_RS05050	COG4213	ABC transporter substrate-binding protein
PJDR2_RS05055	COG1129	ABC transporter
PJDR2_RS05060	COG4214	carbohydrate transport
PJDR2_RS05075	COG4474	Belongs to the UPF0398 family
PJDR2_RS05140	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS05150	COG2309	aminopeptidase activity
PJDR2_RS05160	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
PJDR2_RS05165	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
PJDR2_RS05170	COG2205	protein histidine kinase activity
PJDR2_RS05195	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS05200	COG2822	iron ion transport
PJDR2_RS05205	COG2837	iron assimilation
PJDR2_RS05210	COG0672	)-iron permease
PJDR2_RS05235	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PJDR2_RS05250	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PJDR2_RS05255	COG2207	Transcriptional regulator
PJDR2_RS05255	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS05260	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PJDR2_RS05265	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
PJDR2_RS05270	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
PJDR2_RS05305	COG3706	GGDEF domain
PJDR2_RS05320	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PJDR2_RS05325	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PJDR2_RS05330	COG0802	atpase or kinase
PJDR2_RS05335	COG1214	PFAM Peptidase M22, glycoprotease
PJDR2_RS05340	COG0456	acetyltransferase
PJDR2_RS05350	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PJDR2_RS05365	COG0142	geranyltranstransferase activity
PJDR2_RS05375	COG4585	Histidine kinase
PJDR2_RS05380	COG2197	response regulator
PJDR2_RS05390	COG0488	(ABC) transporter
PJDR2_RS05395	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PJDR2_RS05400	COG0315	cyclic pyranopterin monophosphate synthase activity
PJDR2_RS05405	COG0521	Mo-molybdopterin cofactor biosynthetic process
PJDR2_RS05415	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PJDR2_RS05420	COG0805	protein transport
PJDR2_RS05425	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PJDR2_RS05430	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PJDR2_RS05435	COG0297	glycogen (starch) synthase activity
PJDR2_RS05445	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS05460	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PJDR2_RS05465	COG0459	protein refolding
PJDR2_RS05475	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PJDR2_RS05490	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
PJDR2_RS05495	COG0765	amino acid transport
PJDR2_RS05500	COG1126	abc transporter atp-binding protein
PJDR2_RS05505	COG1785	Belongs to the alkaline phosphatase family
PJDR2_RS05510	COG2340	Cysteine-rich secretory protein family
PJDR2_RS05515	COG1956	GAF domain-containing protein
PJDR2_RS05520	COG0523	cobalamin synthesis protein
PJDR2_RS05555	COG0252	asparaginase activity
PJDR2_RS05560	COG0252	asparaginase activity
PJDR2_RS05565	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
PJDR2_RS05570	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PJDR2_RS05575	COG0864	Transcriptional regulator
PJDR2_RS05580	COG2337	Toxic component of a toxin-antitoxin (TA) module
PJDR2_RS05595	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
PJDR2_RS05625	COG3402	PFAM membrane-flanked domain
PJDR2_RS05630	COG3428	Bacterial PH domain
PJDR2_RS05640	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PJDR2_RS05645	COG0154	amidase activity
PJDR2_RS05650	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PJDR2_RS05655	COG1285	pathogenesis
PJDR2_RS05665	COG0735	belongs to the Fur family
PJDR2_RS05790	COG0697	spore germination
PJDR2_RS05805	COG0814	amino acid
PJDR2_RS05815	COG1842	Phage shock protein A
PJDR2_RS05820	COG1983	PspC domain protein
PJDR2_RS05825	COG1842	Phage shock protein A
PJDR2_RS05830	COG4585	Histidine kinase
PJDR2_RS05835	COG2197	response regulator
PJDR2_RS05855	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PJDR2_RS05860	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
PJDR2_RS05865	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PJDR2_RS05895	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS05900	COG3454	Phosphonate metabolism
PJDR2_RS05910	COG0569	domain protein
PJDR2_RS05915	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PJDR2_RS05935	COG1793	dna ligase
PJDR2_RS05960	COG0640	Transcriptional regulator
PJDR2_RS05970	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PJDR2_RS05975	COG1846	Transcriptional regulator
PJDR2_RS05980	COG0656	L-ascorbic acid biosynthetic process
PJDR2_RS05985	COG2207	Transcriptional regulator
PJDR2_RS05995	COG0529	Catalyzes the synthesis of activated sulfate
PJDR2_RS06025	COG0667	Aldo Keto reductase
PJDR2_RS06050	COG2226	methyltransferase
PJDR2_RS06055	COG3940	Belongs to the glycosyl hydrolase 43 family
PJDR2_RS06070	COG4753	response regulator
PJDR2_RS06070	COG2207	Transcriptional regulator
PJDR2_RS06075	COG0383	alpha-mannosidase activity
PJDR2_RS06080	COG3275	phosphorelay sensor kinase activity
PJDR2_RS06090	COG3275	phosphorelay sensor kinase activity
PJDR2_RS06095	COG4753	response regulator
PJDR2_RS06095	COG2207	Transcriptional regulator
PJDR2_RS06100	COG4209	transmembrane transport
PJDR2_RS06105	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS06110	COG1653	transport
PJDR2_RS06115	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS06135	COG4196	transglutaminase domain protein
PJDR2_RS06145	COG0534	Mate efflux family protein
PJDR2_RS06150	COG4209	transmembrane transport
PJDR2_RS06155	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS06160	COG1653	transport
PJDR2_RS06165	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS06175	COG1472	Belongs to the glycosyl hydrolase 3 family
PJDR2_RS06180	COG4948	Mandelate Racemase Muconate Lactonizing
PJDR2_RS06185	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
PJDR2_RS06190	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS06195	COG4209	transmembrane transport
PJDR2_RS06200	COG1653	transport
PJDR2_RS06220	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
PJDR2_RS06225	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
PJDR2_RS06230	COG1733	regulation of RNA biosynthetic process
PJDR2_RS06255	COG1940	carbohydrate kinase activity
PJDR2_RS06260	COG1482	cell wall glycoprotein biosynthetic process
PJDR2_RS06265	COG1609	Transcriptional regulator
PJDR2_RS06275	COG1309	transcriptional regulator
PJDR2_RS06280	COG1511	domain protein
PJDR2_RS06285	COG1368	sulfuric ester hydrolase activity
PJDR2_RS06310	COG0739	heme binding
PJDR2_RS06320	COG4470	Protein conserved in bacteria
PJDR2_RS06325	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PJDR2_RS06330	COG3314	Sporulation integral membrane protein YlbJ
PJDR2_RS06335	COG2346	COG2346, Truncated hemoglobins
PJDR2_RS06375	COG1494	fructose-1,6-bisphosphatase
PJDR2_RS06380	COG0105	UTP biosynthetic process
PJDR2_RS06385	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PJDR2_RS06390	COG3944	biosynthesis protein
PJDR2_RS06395	COG1210	Utp--glucose-1-phosphate uridylyltransferase
PJDR2_RS06400	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
PJDR2_RS06405	COG0662	Cupin 2, conserved barrel domain protein
PJDR2_RS06405	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
PJDR2_RS06420	COG0489	protein tyrosine kinase activity
PJDR2_RS06425	COG1216	Glycosyl transferase, family 2
PJDR2_RS06435	COG0438	transferase activity, transferring glycosyl groups
PJDR2_RS06445	COG0438	transferase activity, transferring glycosyl groups
PJDR2_RS06450	COG0438	transferase activity, transferring glycosyl groups
PJDR2_RS06455	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PJDR2_RS06455	COG0438	transferase activity, transferring glycosyl groups
PJDR2_RS06480	COG1132	(ABC) transporter
PJDR2_RS06535	COG1090	epimerase
PJDR2_RS06555	COG0788	formyltetrahydrofolate deformylase activity
PJDR2_RS06565	COG3123	guanosine phosphorylase activity
PJDR2_RS06570	COG2084	Dehydrogenase
PJDR2_RS06575	COG0166	Belongs to the GPI family
PJDR2_RS06580	COG1739	Uncharacterized protein family UPF0029
PJDR2_RS06585	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
PJDR2_RS06590	COG4208	sulfate ABC transporter
PJDR2_RS06595	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
PJDR2_RS06600	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
PJDR2_RS06605	COG0561	phosphatase activity
PJDR2_RS06610	COG0793	Belongs to the peptidase S41A family
PJDR2_RS06610	COG3409	Peptidoglycan-binding domain 1 protein
PJDR2_RS06620	COG1528	Iron-storage protein
PJDR2_RS06625	COG0210	DNA helicase
PJDR2_RS06640	COG0735	belongs to the Fur family
PJDR2_RS06650	COG1657	PFAM Prenyltransferase squalene oxidase
PJDR2_RS06680	COG1428	Deoxynucleoside kinase
PJDR2_RS06690	COG1940	carbohydrate kinase activity
PJDR2_RS06695	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
PJDR2_RS06700	COG1242	4 iron, 4 sulfur cluster binding
PJDR2_RS06710	COG0220	tRNA (guanine-N7-)-methyltransferase activity
PJDR2_RS06715	COG0671	phosphoesterase, PA-phosphatase related
PJDR2_RS06725	COG1215	transferase activity, transferring glycosyl groups
PJDR2_RS06735	COG0291	Belongs to the bacterial ribosomal protein bL35 family
PJDR2_RS06740	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PJDR2_RS06745	COG2207	Transcriptional regulator
PJDR2_RS06760	COG2972	Histidine kinase
PJDR2_RS06765	COG2201	protein-glutamate methylesterase activity
PJDR2_RS06770	COG4209	transmembrane transport
PJDR2_RS06775	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS06800	COG0028	Belongs to the TPP enzyme family
PJDR2_RS06805	COG0440	acetolactate synthase activity
PJDR2_RS06810	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PJDR2_RS06815	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PJDR2_RS06820	COG0432	Pfam Uncharacterised protein family UPF0047
PJDR2_RS06825	COG0473	3-isopropylmalate dehydrogenase activity
PJDR2_RS06830	COG0450	alkyl hydroperoxide reductase
PJDR2_RS06845	COG0697	spore germination
PJDR2_RS06865	COG1191	sigma factor activity
PJDR2_RS06870	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS06875	COG4191	Histidine kinase
PJDR2_RS06880	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PJDR2_RS06885	COG4753	response regulator
PJDR2_RS06885	COG2207	Transcriptional regulator
PJDR2_RS06890	COG3275	phosphorelay sensor kinase activity
PJDR2_RS06900	COG4209	transmembrane transport
PJDR2_RS06905	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS06920	COG3507	Belongs to the glycosyl hydrolase 43 family
PJDR2_RS06925	COG1902	pentaerythritol trinitrate reductase activity
PJDR2_RS06935	COG2814	Major facilitator Superfamily
PJDR2_RS06945	COG2169	Transcriptional regulator
PJDR2_RS06955	COG0693	protein deglycase activity
PJDR2_RS06960	COG2972	Histidine kinase
PJDR2_RS06970	COG1175	transmembrane transport
PJDR2_RS06975	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS06985	COG1621	beta-fructofuranosidase activity
PJDR2_RS06995	COG2814	Major facilitator Superfamily
PJDR2_RS07000	COG2197	response regulator
PJDR2_RS07005	COG3275	phosphorelay sensor kinase activity
PJDR2_RS07020	COG1609	Transcriptional regulator
PJDR2_RS07025	COG2407	Converts the aldose L-fucose into the corresponding ketose L-fuculose
PJDR2_RS07035	COG1070	Carbohydrate kinase
PJDR2_RS07040	COG4154	Belongs to the RbsD FucU family
PJDR2_RS07060	COG5566	PFAM Mor transcription activator
PJDR2_RS07080	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS07085	COG0626	cystathionine gamma-synthase activity
PJDR2_RS07095	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
PJDR2_RS07100	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
PJDR2_RS07105	COG2733	membrane
PJDR2_RS07110	COG4619	ABC transporter
PJDR2_RS07115	COG0390	transport system, permease component
PJDR2_RS07120	COG1733	regulation of RNA biosynthetic process
PJDR2_RS07125	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PJDR2_RS07135	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PJDR2_RS07140	COG2153	protein acetylation
PJDR2_RS07160	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
PJDR2_RS07165	COG1984	allophanate hydrolase subunit 2
PJDR2_RS07170	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
PJDR2_RS07185	COG0840	transmembrane signaling receptor activity
PJDR2_RS07190	COG2271	Major facilitator Superfamily
PJDR2_RS07200	COG3850	Histidine kinase
PJDR2_RS07205	COG2197	response regulator
PJDR2_RS07210	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PJDR2_RS07220	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PJDR2_RS07225	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS07240	COG1193	negative regulation of DNA recombination
PJDR2_RS07245	COG3766	membrane
PJDR2_RS07255	COG0477	Major facilitator Superfamily
PJDR2_RS07260	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
PJDR2_RS07270	COG5337	Spore coat protein CotH
PJDR2_RS07310	COG1522	sequence-specific DNA binding
PJDR2_RS07315	COG0436	Aminotransferase
PJDR2_RS07320	COG2096	Adenosyltransferase
PJDR2_RS07325	COG0564	pseudouridine synthase activity
PJDR2_RS07330	COG1393	Belongs to the ArsC family
PJDR2_RS07335	COG0436	Aminotransferase
PJDR2_RS07340	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PJDR2_RS07345	COG3266	domain, Protein
PJDR2_RS07345	COG2911	Protein conserved in bacteria
PJDR2_RS07345	COG1361	Conserved repeat domain
PJDR2_RS07395	COG0300	oxidoreductase activity
PJDR2_RS07405	COG1361	Conserved repeat domain
PJDR2_RS07410	COG1131	(ABC) transporter
PJDR2_RS07415	COG4473	ABC transporter
PJDR2_RS07430	COG0688	phosphatidylethanolamine metabolic process
PJDR2_RS07435	COG0438	transferase activity, transferring glycosyl groups
PJDR2_RS07450	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PJDR2_RS07455	COG1215	transferase activity, transferring glycosyl groups
PJDR2_RS07485	COG4641	Protein conserved in bacteria
PJDR2_RS07490	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PJDR2_RS07500	COG2197	response regulator
PJDR2_RS07505	COG0753	catalase activity
PJDR2_RS07510	COG2204	response regulator
PJDR2_RS07515	COG2972	Histidine kinase
PJDR2_RS07520	COG1653	transport
PJDR2_RS07525	COG1175	transmembrane transport
PJDR2_RS07530	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS07555	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
PJDR2_RS07575	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS07580	COG2972	Histidine kinase
PJDR2_RS07590	COG1472	Belongs to the glycosyl hydrolase 3 family
PJDR2_RS07595	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
PJDR2_RS07605	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PJDR2_RS07610	COG0156	8-amino-7-oxononanoate synthase activity
PJDR2_RS07620	COG4106	trans-aconitate 2-methyltransferase activity
PJDR2_RS07625	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PJDR2_RS07655	COG1733	regulation of RNA biosynthetic process
PJDR2_RS07660	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PJDR2_RS07665	COG0583	DNA-binding transcription factor activity
PJDR2_RS07685	COG0667	Aldo Keto reductase
PJDR2_RS07700	COG4209	transmembrane transport
PJDR2_RS07705	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS07715	COG2207	Transcriptional regulator
PJDR2_RS07780	COG5002	protein histidine kinase activity
PJDR2_RS07785	COG0385	Bile acid
PJDR2_RS07790	COG5002	protein histidine kinase activity
PJDR2_RS07795	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS07805	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PJDR2_RS07815	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PJDR2_RS07820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PJDR2_RS07825	COG0322	excinuclease ABC activity
PJDR2_RS07850	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS07850	COG2207	Transcriptional regulator
PJDR2_RS07855	COG1874	Beta-galactosidase
PJDR2_RS07880	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
PJDR2_RS07885	COG0704	Plays a role in the regulation of phosphate uptake
PJDR2_RS07900	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
PJDR2_RS07905	COG1971	Probably functions as a manganese efflux pump
PJDR2_RS07910	COG0237	dephospho-CoA kinase activity
PJDR2_RS07925	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PJDR2_RS08165	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PJDR2_RS08235	COG0305	Participates in initiation and elongation during chromosome replication
PJDR2_RS08245	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PJDR2_RS08300	COG1595	DNA-templated transcription, initiation
PJDR2_RS08360	COG3250	beta-galactosidase activity
PJDR2_RS08365	COG1653	transport
PJDR2_RS08370	COG1175	transmembrane transport
PJDR2_RS08375	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS08390	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PJDR2_RS08395	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PJDR2_RS08400	COG2011	ABC-type metal ion transport system permease component
PJDR2_RS08405	COG1464	Belongs to the NlpA lipoprotein family
PJDR2_RS08415	COG2207	Transcriptional regulator
PJDR2_RS08415	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS08420	COG0667	Aldo Keto reductase
PJDR2_RS08440	COG2226	methyltransferase
PJDR2_RS08445	COG1125	glycine betaine transport
PJDR2_RS08445	COG0517	IMP dehydrogenase activity
PJDR2_RS08450	COG1174	glycine betaine transport
PJDR2_RS08455	COG1732	Glycine betaine
PJDR2_RS08475	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS08480	COG0789	Transcriptional regulator
PJDR2_RS08505	COG2814	Major facilitator Superfamily
PJDR2_RS08565	COG1609	Transcriptional regulator
PJDR2_RS08585	COG1361	Conserved repeat domain
PJDR2_RS08590	COG1653	transport
PJDR2_RS08595	COG1175	transmembrane transport
PJDR2_RS08600	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS08605	COG4753	response regulator
PJDR2_RS08605	COG2207	Transcriptional regulator
PJDR2_RS08610	COG2972	Histidine kinase
PJDR2_RS08615	COG4209	transmembrane transport
PJDR2_RS08620	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS08655	COG3275	phosphorelay sensor kinase activity
PJDR2_RS08660	COG2207	Transcriptional regulator
PJDR2_RS08660	COG4753	response regulator
PJDR2_RS08670	COG1175	transmembrane transport
PJDR2_RS08675	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS08680	COG3250	beta-galactosidase activity
PJDR2_RS08690	COG2207	Transcriptional regulator
PJDR2_RS08690	COG4753	response regulator
PJDR2_RS08695	COG4209	transmembrane transport
PJDR2_RS08700	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS08705	COG1653	transport
PJDR2_RS08715	COG0789	Transcriptional regulator
PJDR2_RS08720	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS08730	COG0300	oxidoreductase activity
PJDR2_RS08735	COG1609	Transcriptional regulator
PJDR2_RS08750	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS08770	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PJDR2_RS08780	COG1595	DNA-templated transcription, initiation
PJDR2_RS08785	COG5662	AntiSigma factor
PJDR2_RS08805	COG3119	arylsulfatase activity
PJDR2_RS08810	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
PJDR2_RS08815	COG0583	DNA-binding transcription factor activity
PJDR2_RS08860	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PJDR2_RS08870	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PJDR2_RS08875	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS08885	COG3940	Belongs to the glycosyl hydrolase 43 family
PJDR2_RS08890	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
PJDR2_RS08895	COG2207	Transcriptional regulator
PJDR2_RS08905	COG4209	transmembrane transport
PJDR2_RS08910	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS08935	COG1285	pathogenesis
PJDR2_RS08970	COG5386	Cell surface protein
PJDR2_RS08975	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS08980	COG5002	protein histidine kinase activity
PJDR2_RS08985	COG1501	Belongs to the glycosyl hydrolase 31 family
PJDR2_RS09005	COG2207	Transcriptional regulator
PJDR2_RS09010	COG4209	transmembrane transport
PJDR2_RS09015	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS09025	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
PJDR2_RS09035	COG1846	Transcriptional regulator
PJDR2_RS09050	COG4209	transmembrane transport
PJDR2_RS09055	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS09065	COG2207	Transcriptional regulator
PJDR2_RS09065	COG4753	response regulator
PJDR2_RS09070	COG3275	phosphorelay sensor kinase activity
PJDR2_RS09080	COG2207	Transcriptional regulator
PJDR2_RS09080	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS09090	COG0667	Aldo Keto reductase
PJDR2_RS09095	COG2972	Histidine kinase
PJDR2_RS09100	COG4753	response regulator
PJDR2_RS09100	COG2207	Transcriptional regulator
PJDR2_RS09115	COG1175	transmembrane transport
PJDR2_RS09120	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS09135	COG2207	Transcriptional regulator
PJDR2_RS09135	COG0662	Cupin 2, conserved barrel domain protein
PJDR2_RS09140	COG3940	Belongs to the glycosyl hydrolase 43 family
PJDR2_RS09150	COG4209	transmembrane transport
PJDR2_RS09155	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS09180	COG3773	Cell wall hydrolase
PJDR2_RS09180	COG3409	Peptidoglycan-binding domain 1 protein
PJDR2_RS09195	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
PJDR2_RS09200	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PJDR2_RS09205	COG1940	carbohydrate kinase activity
PJDR2_RS09215	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS09220	COG1606	tRNA processing
PJDR2_RS09225	COG1070	Carbohydrate kinase
PJDR2_RS09230	COG1691	(AIR) carboxylase
PJDR2_RS09235	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PJDR2_RS09240	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PJDR2_RS09270	COG2207	Transcriptional regulator
PJDR2_RS09275	COG1653	transport
PJDR2_RS09280	COG1653	transport
PJDR2_RS09285	COG4209	transmembrane transport
PJDR2_RS09290	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS09305	COG2814	Major facilitator Superfamily
PJDR2_RS09310	COG2207	Transcriptional regulator
PJDR2_RS09315	COG4209	transmembrane transport
PJDR2_RS09320	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS09335	COG0581	inorganic phosphate transmembrane transporter activity
PJDR2_RS09340	COG0573	inorganic phosphate transmembrane transporter activity
PJDR2_RS09345	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
PJDR2_RS09350	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
PJDR2_RS09355	COG2318	DinB family
PJDR2_RS09390	COG1191	sigma factor activity
PJDR2_RS09395	COG2172	sigma factor antagonist activity
PJDR2_RS09405	COG2205	protein histidine kinase activity
PJDR2_RS09405	COG0784	Response regulator, receiver
PJDR2_RS09405	COG5002	protein histidine kinase activity
PJDR2_RS09410	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
PJDR2_RS09420	COG1070	Carbohydrate kinase
PJDR2_RS09430	COG4209	transmembrane transport
PJDR2_RS09440	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PJDR2_RS09470	COG4185	zeta toxin
PJDR2_RS09515	COG1472	Belongs to the glycosyl hydrolase 3 family
PJDR2_RS09520	COG3266	domain, Protein
PJDR2_RS09520	COG2911	Protein conserved in bacteria
PJDR2_RS09520	COG1361	Conserved repeat domain
PJDR2_RS09530	COG2972	Histidine kinase
PJDR2_RS09530	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS09535	COG2207	Transcriptional regulator
PJDR2_RS09540	COG1653	transport
PJDR2_RS09555	COG4211	Belongs to the binding-protein-dependent transport system permease family
PJDR2_RS09575	COG1366	Belongs to the anti-sigma-factor antagonist family
PJDR2_RS09585	COG2208	phosphoserine phosphatase activity
PJDR2_RS09600	COG0584	glycerophosphoryl diester phosphodiesterase
PJDR2_RS09605	COG1175	transmembrane transport
PJDR2_RS09615	COG1653	transport
PJDR2_RS09640	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
PJDR2_RS09645	COG1960	acyl-CoA dehydrogenase activity
PJDR2_RS09660	COG2814	Major facilitator Superfamily
PJDR2_RS09670	COG1595	DNA-templated transcription, initiation
PJDR2_RS09675	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS09680	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS09695	COG2814	Major facilitator Superfamily
PJDR2_RS09705	COG0572	uridine kinase
PJDR2_RS09710	COG1070	Carbohydrate kinase
PJDR2_RS09725	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
PJDR2_RS09735	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
PJDR2_RS09740	COG1802	Transcriptional regulator
PJDR2_RS09765	COG1131	(ABC) transporter
PJDR2_RS09770	COG1522	sequence-specific DNA binding
PJDR2_RS09775	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
PJDR2_RS09780	COG0596	Alpha beta hydrolase
PJDR2_RS09790	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
PJDR2_RS09800	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS09800	COG3321	synthase
PJDR2_RS09800	COG0604	alcohol dehydrogenase
PJDR2_RS09815	COG0463	Glycosyl transferase, family 2
PJDR2_RS09815	COG0457	Tetratricopeptide repeat
PJDR2_RS09820	COG4977	sequence-specific DNA binding
PJDR2_RS09835	COG1132	(ABC) transporter
PJDR2_RS09845	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS09855	COG0583	DNA-binding transcription factor activity
PJDR2_RS09860	COG1380	Effector of murein hydrolase LrgA
PJDR2_RS09865	COG1346	cytolysis
PJDR2_RS09870	COG0697	spore germination
PJDR2_RS09880	COG2267	carboxylic ester hydrolase activity
PJDR2_RS09905	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
PJDR2_RS09915	COG2207	Transcriptional regulator
PJDR2_RS09915	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS09920	COG1501	Belongs to the glycosyl hydrolase 31 family
PJDR2_RS09925	COG1472	Belongs to the glycosyl hydrolase 3 family
PJDR2_RS09930	COG2972	Histidine kinase
PJDR2_RS09935	COG4753	response regulator
PJDR2_RS09935	COG2207	Transcriptional regulator
PJDR2_RS09940	COG4209	transmembrane transport
PJDR2_RS09945	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS09965	COG2172	sigma factor antagonist activity
PJDR2_RS09970	COG2207	Transcriptional regulator
PJDR2_RS09970	COG4753	response regulator
PJDR2_RS09980	COG1175	transmembrane transport
PJDR2_RS09985	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS09990	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PJDR2_RS10010	COG3962	Belongs to the TPP enzyme family
PJDR2_RS10015	COG1082	Xylose isomerase domain protein TIM barrel
PJDR2_RS10020	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PJDR2_RS10025	COG1012	belongs to the aldehyde dehydrogenase family
PJDR2_RS10030	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS10035	COG3718	enzyme involved in inositol metabolism
PJDR2_RS10040	COG1609	Transcriptional regulator
PJDR2_RS10050	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PJDR2_RS10065	COG3180	Ammonia monooxygenase
PJDR2_RS10095	COG0697	spore germination
PJDR2_RS10135	COG3842	ATPase activity
PJDR2_RS10145	COG2140	Oxalate decarboxylase
PJDR2_RS10165	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS10165	COG2207	Transcriptional regulator
PJDR2_RS10185	COG2207	Transcriptional regulator
PJDR2_RS10185	COG4753	response regulator
PJDR2_RS10185	COG2207	Transcriptional regulator
PJDR2_RS10185	COG4753	response regulator
PJDR2_RS10205	COG4209	transmembrane transport
PJDR2_RS10210	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS10230	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS10245	COG2207	Transcriptional regulator
PJDR2_RS10245	COG4753	response regulator
PJDR2_RS10255	COG1175	transmembrane transport
PJDR2_RS10260	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS10270	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
PJDR2_RS10275	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
PJDR2_RS10275	COG1263	PTS System
PJDR2_RS10275	COG2190	(PTS) system
PJDR2_RS10280	COG1263	PTS System
PJDR2_RS10280	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
PJDR2_RS10280	COG2190	(PTS) system
PJDR2_RS10310	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS10320	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PJDR2_RS10340	COG2972	Histidine kinase
PJDR2_RS10345	COG4753	response regulator
PJDR2_RS10345	COG2207	Transcriptional regulator
PJDR2_RS10350	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
PJDR2_RS10365	COG1054	Belongs to the UPF0176 family
PJDR2_RS10380	COG0583	DNA-binding transcription factor activity
PJDR2_RS10390	COG0861	Integral membrane protein TerC family
PJDR2_RS10395	COG3401	FG-GAP repeat protein
PJDR2_RS10400	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PJDR2_RS10405	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PJDR2_RS10410	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
PJDR2_RS10425	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
PJDR2_RS10445	COG2205	protein histidine kinase activity
PJDR2_RS10450	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS10455	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
PJDR2_RS10460	COG2514	catechol 2,3-dioxygenase activity
PJDR2_RS10465	COG0561	phosphatase activity
PJDR2_RS10470	COG1227	inorganic diphosphatase activity
PJDR2_RS10480	COG0791	NLP P60 protein
PJDR2_RS10485	COG1846	Transcriptional regulator
PJDR2_RS10540	COG1175	transmembrane transport
PJDR2_RS10545	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS10555	COG4753	response regulator
PJDR2_RS10555	COG2207	Transcriptional regulator
PJDR2_RS10560	COG1653	transport
PJDR2_RS10570	COG1653	transport
PJDR2_RS10575	COG4209	transmembrane transport
PJDR2_RS10580	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS10595	COG1653	transport
PJDR2_RS10600	COG4824	toxin secretion phage lysis holin
PJDR2_RS10625	COG2445	Protein of unknown function DUF86
PJDR2_RS10645	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
PJDR2_RS10675	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PJDR2_RS10680	COG1368	sulfuric ester hydrolase activity
PJDR2_RS10685	COG0116	Belongs to the methyltransferase superfamily
PJDR2_RS10690	COG4122	O-methyltransferase activity
PJDR2_RS10715	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PJDR2_RS10725	COG1459	type II secretion system
PJDR2_RS10735	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
PJDR2_RS10750	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PJDR2_RS10755	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
PJDR2_RS10760	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
PJDR2_RS10770	COG0584	glycerophosphoryl diester phosphodiesterase
PJDR2_RS10800	COG1164	Oligoendopeptidase f
PJDR2_RS10845	COG1132	(ABC) transporter
PJDR2_RS10855	COG5002	protein histidine kinase activity
PJDR2_RS10860	COG5002	protein histidine kinase activity
PJDR2_RS10865	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS10870	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PJDR2_RS10885	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PJDR2_RS10890	COG0513	Belongs to the DEAD box helicase family
PJDR2_RS10895	COG5578	integral membrane protein
PJDR2_RS10905	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PJDR2_RS10910	COG0705	Rhomboid family
PJDR2_RS10915	COG0583	DNA-binding transcription factor activity
PJDR2_RS10920	COG2738	Putative neutral zinc metallopeptidase
PJDR2_RS10925	COG0789	Transcriptional regulator
PJDR2_RS10930	COG0004	ammonium transporteR
PJDR2_RS10940	COG2176	DNA-directed DNA polymerase activity
PJDR2_RS10950	COG2814	Major facilitator Superfamily
PJDR2_RS10955	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PJDR2_RS10960	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PJDR2_RS10965	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PJDR2_RS10970	COG1141	Ferredoxin
PJDR2_RS10975	COG0167	dihydroorotate dehydrogenase activity
PJDR2_RS10980	COG2357	RelA SpoT domain protein
PJDR2_RS10985	COG1609	Transcriptional regulator
PJDR2_RS10990	COG2942	2-epimerase
PJDR2_RS10995	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
PJDR2_RS11000	COG3458	cephalosporin-C deacetylase activity
PJDR2_RS11005	COG1846	Transcriptional regulator
PJDR2_RS11010	COG1511	domain protein
PJDR2_RS11015	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PJDR2_RS11020	COG0446	pyridine nucleotide-disulphide oxidoreductase
PJDR2_RS11025	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PJDR2_RS11025	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
PJDR2_RS11030	COG1187	pseudouridine synthase activity
PJDR2_RS11035	COG0561	phosphatase activity
PJDR2_RS11045	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PJDR2_RS11045	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
PJDR2_RS11055	COG4895	conserved protein (DUF2196)
PJDR2_RS11080	COG0095	Lipoate-protein ligase
PJDR2_RS11095	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PJDR2_RS11100	COG0243	molybdopterin cofactor binding
PJDR2_RS11105	COG0746	molybdenum cofactor guanylyltransferase activity
PJDR2_RS11120	COG2205	protein histidine kinase activity
PJDR2_RS11135	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PJDR2_RS11140	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PJDR2_RS11165	COG0495	leucyl-tRNA aminoacylation
PJDR2_RS11170	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PJDR2_RS11190	COG2333	competence protein COMEC
PJDR2_RS11190	COG0658	competence protein
PJDR2_RS11195	COG1595	DNA-templated transcription, initiation
PJDR2_RS11205	COG1466	dna polymerase III delta subunit
PJDR2_RS11210	COG0268	Binds directly to 16S ribosomal RNA
PJDR2_RS11230	COG0481	GTPase activity
PJDR2_RS11235	COG0635	Involved in the biosynthesis of porphyrin-containing compound
PJDR2_RS11240	COG0165	Argininosuccinate lyase
PJDR2_RS11240	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
PJDR2_RS11245	COG1420	regulation of RNA biosynthetic process
PJDR2_RS11270	COG2264	protein methyltransferase activity
PJDR2_RS11275	COG1994	Peptidase M50
PJDR2_RS11280	COG1385	rRNA (uridine-N3-)-methyltransferase activity
PJDR2_RS11285	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PJDR2_RS11295	COG1283	sodium-dependent phosphate transmembrane transporter activity
PJDR2_RS11300	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
PJDR2_RS11310	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
PJDR2_RS11315	COG1074	ATP-dependent DNA helicase activity
PJDR2_RS11330	COG0537	adenosine 5'-monophosphoramidase activity
PJDR2_RS11335	COG0828	Belongs to the bacterial ribosomal protein bS21 family
PJDR2_RS11340	COG1610	YqeY-like protein
PJDR2_RS11345	COG1030	water channel activity
PJDR2_RS11350	COG4864	UPF0365 protein
PJDR2_RS11370	COG1702	phosphate starvation-inducible protein PhoH
PJDR2_RS11375	COG1480	7TM receptor with intracellular HD hydrolase
PJDR2_RS11380	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PJDR2_RS11385	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
PJDR2_RS11395	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PJDR2_RS11400	COG1381	Involved in DNA repair and RecF pathway recombination
PJDR2_RS11405	COG0752	glycyl-tRNA synthetase alpha subunit
PJDR2_RS11410	COG0751	glycine-tRNA ligase activity
PJDR2_RS11415	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
PJDR2_RS11420	COG1671	Belongs to the UPF0178 family
PJDR2_RS11425	COG0358	DNA primase activity
PJDR2_RS11440	COG2384	SAM-dependent methyltransferase
PJDR2_RS11445	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PJDR2_RS11470	COG1119	ATPase activity
PJDR2_RS11480	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PJDR2_RS11485	COG3973	AAA domain
PJDR2_RS11500	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PJDR2_RS11505	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PJDR2_RS11510	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PJDR2_RS11515	COG0297	glycogen (starch) synthase activity
PJDR2_RS11575	COG0803	Belongs to the bacterial solute-binding protein 9 family
PJDR2_RS11575	COG3443	Belongs to the bacterial solute-binding protein 9 family
PJDR2_RS11580	COG1121	(ABC) transporter
PJDR2_RS11585	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PJDR2_RS11590	COG0785	Cytochrome C biogenesis protein
PJDR2_RS11595	COG1321	iron dependent repressor
PJDR2_RS11620	COG1752	Esterase of the alpha-beta hydrolase superfamily
PJDR2_RS11630	COG3872	metal-dependent enzyme
PJDR2_RS11640	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
PJDR2_RS11645	COG0006	proline dipeptidase activity
PJDR2_RS11650	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PJDR2_RS11660	COG2707	UPF0756 membrane protein
PJDR2_RS11665	COG2045	Belongs to the ComB family
PJDR2_RS11670	COG1809	phosphosulfolactate synthase activity
PJDR2_RS11680	COG3854	ATPases associated with a variety of cellular activities
PJDR2_RS11720	COG0511	ligase activity, forming carbon-carbon bonds
PJDR2_RS11725	COG0439	Biotin carboxylase
PJDR2_RS11730	COG1302	Protein conserved in bacteria
PJDR2_RS11745	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PJDR2_RS11755	COG1570	exodeoxyribonuclease VII activity
PJDR2_RS11760	COG1722	exodeoxyribonuclease VII activity
PJDR2_RS11770	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PJDR2_RS11775	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
PJDR2_RS11785	COG1438	arginine binding
PJDR2_RS11790	COG0497	DNA recombination
PJDR2_RS11795	COG0750	zinc metalloprotease
PJDR2_RS11800	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS11810	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PJDR2_RS11815	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
PJDR2_RS11820	COG0022	dehydrogenase e1 component
PJDR2_RS11830	COG0321	lipoyl(octanoyl) transferase activity
PJDR2_RS11835	COG2195	Cleaves the N-terminal amino acid of tripeptides
PJDR2_RS11845	COG1300	Membrane
PJDR2_RS11850	COG0735	belongs to the Fur family
PJDR2_RS11855	COG1404	Belongs to the peptidase S8 family
PJDR2_RS11860	COG0686	Belongs to the AlaDH PNT family
PJDR2_RS11870	COG4974	Belongs to the 'phage' integrase family
PJDR2_RS11875	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PJDR2_RS11895	COG1686	Belongs to the peptidase S11 family
PJDR2_RS11900	COG1366	Belongs to the anti-sigma-factor antagonist family
PJDR2_RS11905	COG2172	sigma factor antagonist activity
PJDR2_RS11915	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PJDR2_RS11935	COG0697	spore germination
PJDR2_RS11940	COG0019	diaminopimelate decarboxylase activity
PJDR2_RS11945	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PJDR2_RS11950	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PJDR2_RS11950	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PJDR2_RS11955	COG0307	riboflavin synthase, alpha
PJDR2_RS11960	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PJDR2_RS11960	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PJDR2_RS11970	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PJDR2_RS11975	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PJDR2_RS11980	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PJDR2_RS11985	COG2011	ABC-type metal ion transport system permease component
PJDR2_RS12000	COG3874	Sporulation protein YtfJ
PJDR2_RS12005	COG1686	Belongs to the peptidase S11 family
PJDR2_RS12010	COG2715	membrane protein required for spore maturation
PJDR2_RS12015	COG0700	Nucleoside recognition
PJDR2_RS12020	COG1187	pseudouridine synthase activity
PJDR2_RS12025	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PJDR2_RS12030	COG1333	cytochrome c biogenesis protein
PJDR2_RS12035	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
PJDR2_RS12040	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS12045	COG5002	protein histidine kinase activity
PJDR2_RS12050	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PJDR2_RS12055	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
PJDR2_RS12060	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PJDR2_RS12070	COG1266	CAAX protease self-immunity
PJDR2_RS12090	COG4862	establishment of competence for transformation
PJDR2_RS12095	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
PJDR2_RS12100	COG2339	peptidase activity
PJDR2_RS12105	COG2959	enzyme of heme biosynthesis
PJDR2_RS12120	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
PJDR2_RS12150	COG1160	GTP binding
PJDR2_RS12155	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
PJDR2_RS12195	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PJDR2_RS12205	COG1129	ABC transporter
PJDR2_RS12210	COG1172	Belongs to the binding-protein-dependent transport system permease family
PJDR2_RS12215	COG0776	regulation of translation
PJDR2_RS12235	COG2226	methyltransferase
PJDR2_RS12240	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
PJDR2_RS12245	COG0163	prenyltransferase activity
PJDR2_RS12250	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
PJDR2_RS12265	COG0105	UTP biosynthetic process
PJDR2_RS12270	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
PJDR2_RS12275	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PJDR2_RS12280	COG4401	Chorismate mutase type I
PJDR2_RS12290	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PJDR2_RS12295	COG0134	indole-3-glycerol-phosphate synthase activity
PJDR2_RS12300	COG0135	phosphoribosylanthranilate isomerase activity
PJDR2_RS12305	COG0133	tryptophan synthase activity
PJDR2_RS12310	COG0159	tryptophan synthase activity
PJDR2_RS12315	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PJDR2_RS12320	COG0287	Prephenate dehydrogenase
PJDR2_RS12360	COG0723	plastoquinol--plastocyanin reductase activity
PJDR2_RS12375	COG4347	Protein of unknown function (DUF1405)
PJDR2_RS12385	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PJDR2_RS12390	COG1694	Mazg nucleotide pyrophosphohydrolase
PJDR2_RS12400	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
PJDR2_RS12405	COG1803	Methylglyoxal synthase
PJDR2_RS12410	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
PJDR2_RS12415	COG0438	transferase activity, transferring glycosyl groups
PJDR2_RS12425	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
PJDR2_RS12425	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
PJDR2_RS12430	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
PJDR2_RS12435	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PJDR2_RS12440	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PJDR2_RS12450	COG1199	ATP-dependent helicase activity
PJDR2_RS12450	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PJDR2_RS12455	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PJDR2_RS12460	COG0402	S-adenosylhomocysteine deaminase activity
PJDR2_RS12475	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PJDR2_RS12480	COG1250	3-hydroxyacyl-CoA dehydrogenase
PJDR2_RS12485	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PJDR2_RS12490	COG3935	DnaD domain protein
PJDR2_RS12495	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS12495	COG2207	Transcriptional regulator
PJDR2_RS12515	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PJDR2_RS12520	COG0235	Class ii aldolase
PJDR2_RS12525	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
PJDR2_RS12530	COG1850	ribulose-bisphosphate carboxylase activity
PJDR2_RS12535	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PJDR2_RS12540	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PJDR2_RS12545	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PJDR2_RS12550	COG0436	Aminotransferase
PJDR2_RS12560	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PJDR2_RS12565	COG0583	DNA-binding transcription factor activity
PJDR2_RS12570	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PJDR2_RS12575	COG0066	3-isopropylmalate dehydratase activity
PJDR2_RS12580	COG0860	N-Acetylmuramoyl-L-alanine amidase
PJDR2_RS12580	COG2247	cell wall binding repeat
PJDR2_RS12595	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PJDR2_RS12605	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PJDR2_RS12610	COG3401	FG-GAP repeat protein
PJDR2_RS12625	COG2814	Major facilitator Superfamily
PJDR2_RS12630	COG1309	transcriptional regulator
PJDR2_RS12645	COG1132	(ABC) transporter
PJDR2_RS12650	COG1132	(ABC) transporter
PJDR2_RS12665	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PJDR2_RS12670	COG1846	Transcriptional regulator
PJDR2_RS12680	COG0564	pseudouridine synthase activity
PJDR2_RS12685	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
PJDR2_RS12685	COG0116	Belongs to the methyltransferase superfamily
PJDR2_RS12690	COG0671	phosphoesterase, PA-phosphatase related
PJDR2_RS12695	COG1396	sequence-specific DNA binding
PJDR2_RS12720	COG1846	Transcriptional regulator
PJDR2_RS12730	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
PJDR2_RS12735	COG0583	DNA-binding transcription factor activity
PJDR2_RS12740	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
PJDR2_RS12745	COG0840	transmembrane signaling receptor activity
PJDR2_RS12755	COG0456	acetyltransferase
PJDR2_RS12760	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PJDR2_RS12765	COG4335	DNA alkylation repair
PJDR2_RS12775	COG0346	lactoylglutathione lyase activity
PJDR2_RS12800	COG1011	Hydrolase
PJDR2_RS12810	COG3250	beta-galactosidase activity
PJDR2_RS12870	COG2972	Histidine kinase
PJDR2_RS12875	COG2201	protein-glutamate methylesterase activity
PJDR2_RS12880	COG1653	transport
PJDR2_RS12885	COG4209	transmembrane transport
PJDR2_RS12890	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS12895	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS12905	COG1653	transport
PJDR2_RS12925	COG2133	pyrroloquinoline quinone binding
PJDR2_RS12925	COG5183	chlorophyll binding
PJDR2_RS12930	COG4753	response regulator
PJDR2_RS12930	COG2207	Transcriptional regulator
PJDR2_RS12935	COG0840	transmembrane signaling receptor activity
PJDR2_RS12950	COG1175	transmembrane transport
PJDR2_RS12955	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS12965	COG0667	Aldo Keto reductase
PJDR2_RS12975	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PJDR2_RS12985	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS12985	COG2207	Transcriptional regulator
PJDR2_RS12990	COG4753	response regulator
PJDR2_RS12990	COG2207	Transcriptional regulator
PJDR2_RS12995	COG3275	phosphorelay sensor kinase activity
PJDR2_RS13000	COG4209	transmembrane transport
PJDR2_RS13005	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS13035	COG0383	alpha-mannosidase activity
PJDR2_RS13070	COG4753	response regulator
PJDR2_RS13070	COG2207	Transcriptional regulator
PJDR2_RS13075	COG2972	Histidine kinase
PJDR2_RS13080	COG1175	transmembrane transport
PJDR2_RS13085	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS13125	COG2226	methyltransferase
PJDR2_RS13130	COG0644	oxidoreductase
PJDR2_RS13140	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
PJDR2_RS13150	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
PJDR2_RS13150	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
PJDR2_RS13150	COG1703	isobutyryl-CoA mutase activity
PJDR2_RS13165	COG1547	Domain of unknown function (DUF309)
PJDR2_RS13170	COG0288	reversible hydration of carbon dioxide
PJDR2_RS13180	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
PJDR2_RS13185	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PJDR2_RS13190	COG1116	anion transmembrane transporter activity
PJDR2_RS13195	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS13215	COG4641	Protein conserved in bacteria
PJDR2_RS13215	COG1388	LysM domain
PJDR2_RS13220	COG4641	Protein conserved in bacteria
PJDR2_RS13220	COG1388	LysM domain
PJDR2_RS13225	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PJDR2_RS13230	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PJDR2_RS13235	COG2521	methyltransferase
PJDR2_RS13235	COG2136	Putative SAM-dependent methyltransferase
PJDR2_RS13245	COG1923	regulation of RNA biosynthetic process
PJDR2_RS13250	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PJDR2_RS13265	COG1434	Gram-negative-bacterium-type cell wall biogenesis
PJDR2_RS13270	COG0464	growth
PJDR2_RS13275	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PJDR2_RS13280	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
PJDR2_RS13285	COG0789	Transcriptional regulator
PJDR2_RS13290	COG0174	glutamine synthetase
PJDR2_RS13295	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PJDR2_RS13315	COG1011	Hydrolase
PJDR2_RS13320	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
PJDR2_RS13325	COG0646	methionine synthase
PJDR2_RS13325	COG1410	methionine synthase
PJDR2_RS13330	COG1234	tRNA 3'-trailer cleavage
PJDR2_RS13335	COG1988	membrane-bound metal-dependent
PJDR2_RS13340	COG1111	helicase
PJDR2_RS13340	COG1205	dead DEAH box helicase
PJDR2_RS13345	COG3359	exonuclease
PJDR2_RS13350	COG0647	UMP catabolic process
PJDR2_RS13355	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
PJDR2_RS13360	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PJDR2_RS13370	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
PJDR2_RS13380	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS13385	COG5002	protein histidine kinase activity
PJDR2_RS13385	COG3850	Histidine kinase
PJDR2_RS13390	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PJDR2_RS13390	COG3153	acetyltransferase
PJDR2_RS13395	COG0456	acetyltransferase
PJDR2_RS13405	COG0321	lipoyl(octanoyl) transferase activity
PJDR2_RS13405	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
PJDR2_RS13410	COG1193	negative regulation of DNA recombination
PJDR2_RS13420	COG2860	membrane
PJDR2_RS13425	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PJDR2_RS13440	COG0022	dehydrogenase e1 component
PJDR2_RS13455	COG1607	acyl-coa hydrolase
PJDR2_RS13465	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PJDR2_RS13470	COG0493	'glutamate synthase
PJDR2_RS13485	COG0551	DNA topoisomerase type I activity
PJDR2_RS13485	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PJDR2_RS13500	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PJDR2_RS13530	COG2258	MOSC domain
PJDR2_RS13550	COG0714	Associated with various cellular activities
PJDR2_RS13565	COG0492	ferredoxin-NADP+ reductase activity
PJDR2_RS13575	COG1132	(ABC) transporter
PJDR2_RS13580	COG1132	(ABC) transporter
PJDR2_RS13585	COG4974	Belongs to the 'phage' integrase family
PJDR2_RS13595	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PJDR2_RS13640	COG2353	YceI-like domain
PJDR2_RS13650	COG1199	ATP-dependent helicase activity
PJDR2_RS13660	COG0583	DNA-binding transcription factor activity
PJDR2_RS13665	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PJDR2_RS13680	COG1051	belongs to the nudix hydrolase family
PJDR2_RS13745	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS13795	COG1201	RNA secondary structure unwinding
PJDR2_RS13800	COG1132	(ABC) transporter
PJDR2_RS13805	COG1132	(ABC) transporter
PJDR2_RS13830	COG0038	chloride channel
PJDR2_RS13840	COG1363	Peptidase, m42
PJDR2_RS13850	COG2197	response regulator
PJDR2_RS13865	COG2199	diguanylate cyclase activity
PJDR2_RS13865	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
PJDR2_RS13870	COG2199	diguanylate cyclase activity
PJDR2_RS13870	COG2203	Gaf domain
PJDR2_RS13880	COG0028	Belongs to the TPP enzyme family
PJDR2_RS13885	COG0584	glycerophosphoryl diester phosphodiesterase
PJDR2_RS13895	COG0477	Major facilitator Superfamily
PJDR2_RS13900	COG0697	spore germination
PJDR2_RS13915	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
PJDR2_RS13935	COG2814	Major facilitator Superfamily
PJDR2_RS13960	COG2720	vancomycin resistance protein
PJDR2_RS13975	COG3599	regulation of cell shape
PJDR2_RS13985	COG0488	(ABC) transporter
PJDR2_RS14010	COG4555	ABC transporter
PJDR2_RS14015	COG0789	Transcriptional regulator
PJDR2_RS14020	COG1960	acyl-CoA dehydrogenase activity
PJDR2_RS14025	COG0183	Belongs to the thiolase family
PJDR2_RS14030	COG1250	3-hydroxyacyl-CoA dehydrogenase
PJDR2_RS14035	COG1960	acyl-CoA dehydrogenase activity
PJDR2_RS14045	COG0372	Belongs to the citrate synthase family
PJDR2_RS14050	COG2079	MmgE PrpD family protein
PJDR2_RS14055	COG0488	(ABC) transporter
PJDR2_RS14065	COG2217	Heavy metal translocating P-type atpase
PJDR2_RS14075	COG0667	Aldo Keto reductase
PJDR2_RS14080	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
PJDR2_RS14085	COG0697	spore germination
PJDR2_RS14105	COG2814	Major facilitator Superfamily
PJDR2_RS14125	COG0697	spore germination
PJDR2_RS14135	COG1279	arginine transmembrane transporter activity
PJDR2_RS14140	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PJDR2_RS14145	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
PJDR2_RS14145	COG2755	lipolytic protein G-D-S-L family
PJDR2_RS14150	COG1595	DNA-templated transcription, initiation
PJDR2_RS14160	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
PJDR2_RS14175	COG3639	organic phosphonate transmembrane transporter activity
PJDR2_RS14185	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PJDR2_RS14190	COG0737	Belongs to the 5'-nucleotidase family
PJDR2_RS14195	COG0531	amino acid
PJDR2_RS14205	COG3665	Urea carboxylase-associated protein
PJDR2_RS14210	COG0439	Biotin carboxylase
PJDR2_RS14250	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PJDR2_RS14255	COG1910	domain protein
PJDR2_RS14260	COG0725	ABC transporter, periplasmic molybdate-binding protein
PJDR2_RS14270	COG0697	spore germination
PJDR2_RS14290	COG2814	Major facilitator Superfamily
PJDR2_RS14305	COG3842	ATPase activity
PJDR2_RS14310	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PJDR2_RS14310	COG0456	acetyltransferase
PJDR2_RS14320	COG0583	DNA-binding transcription factor activity
PJDR2_RS14325	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PJDR2_RS14340	COG1131	(ABC) transporter
PJDR2_RS14360	COG0697	spore germination
PJDR2_RS14365	COG2723	6-phospho-beta-galactosidase activity
PJDR2_RS14370	COG2322	membrane
PJDR2_RS14385	COG2814	Major facilitator Superfamily
PJDR2_RS14405	COG1609	Transcriptional regulator
PJDR2_RS14410	COG1653	transport
PJDR2_RS14415	COG1175	transmembrane transport
PJDR2_RS14475	COG1309	transcriptional regulator
PJDR2_RS14485	COG0667	Aldo Keto reductase
PJDR2_RS14505	COG0860	N-Acetylmuramoyl-L-alanine amidase
PJDR2_RS14510	COG2226	methyltransferase
PJDR2_RS14550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
PJDR2_RS14555	COG0765	amino acid transport
PJDR2_RS14560	COG0765	amino acid transport
PJDR2_RS14565	COG4191	Histidine kinase
PJDR2_RS14570	COG0784	Response regulator, receiver
PJDR2_RS14600	COG0194	GDP metabolic process
PJDR2_RS14620	COG0488	(ABC) transporter
PJDR2_RS14660	COG2814	Major facilitator Superfamily
PJDR2_RS14665	COG0583	DNA-binding transcription factor activity
PJDR2_RS14670	COG1609	Transcriptional regulator
PJDR2_RS14675	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS14680	COG3842	ATPase activity
PJDR2_RS14705	COG0584	glycerophosphoryl diester phosphodiesterase
PJDR2_RS14710	COG0028	Belongs to the TPP enzyme family
PJDR2_RS14715	COG0440	acetolactate synthase activity
PJDR2_RS14730	COG0697	spore germination
PJDR2_RS14755	COG0833	amino acid
PJDR2_RS14780	COG2814	Major facilitator Superfamily
PJDR2_RS14790	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS14795	COG1904	glucuronate isomerase
PJDR2_RS14800	COG0246	Mannitol dehydrogenase
PJDR2_RS14805	COG2721	sulfolactate sulfo-lyase activity
PJDR2_RS14815	COG2807	transmembrane transport
PJDR2_RS14820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PJDR2_RS14825	COG1595	DNA-templated transcription, initiation
PJDR2_RS14830	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PJDR2_RS14840	COG0723	plastoquinol--plastocyanin reductase activity
PJDR2_RS14840	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PJDR2_RS14850	COG1335	isochorismatase
PJDR2_RS14865	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PJDR2_RS14880	COG1695	Transcriptional regulator
PJDR2_RS14895	COG0805	protein transport
PJDR2_RS14900	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PJDR2_RS14910	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PJDR2_RS14915	COG2226	methyltransferase
PJDR2_RS14930	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
PJDR2_RS14940	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
PJDR2_RS14950	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PJDR2_RS14955	COG0412	Dienelactone hydrolase
PJDR2_RS14960	COG0488	(ABC) transporter
PJDR2_RS14965	COG3973	AAA domain
PJDR2_RS14970	COG0583	DNA-binding transcription factor activity
PJDR2_RS14980	COG0730	response to heat
PJDR2_RS14985	COG1335	isochorismatase
PJDR2_RS14990	COG3458	cephalosporin-C deacetylase activity
PJDR2_RS14995	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS15015	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
PJDR2_RS15020	COG0697	spore germination
PJDR2_RS15035	COG0492	ferredoxin-NADP+ reductase activity
PJDR2_RS15040	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
PJDR2_RS15050	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PJDR2_RS15060	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS15060	COG4977	sequence-specific DNA binding
PJDR2_RS15070	COG2972	Histidine kinase
PJDR2_RS15075	COG2207	Transcriptional regulator
PJDR2_RS15075	COG4753	response regulator
PJDR2_RS15080	COG4209	transmembrane transport
PJDR2_RS15085	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS15100	COG2169	Transcriptional regulator
PJDR2_RS15105	COG3408	Glycogen debranching enzyme
PJDR2_RS15110	COG0753	catalase activity
PJDR2_RS15120	COG0583	DNA-binding transcription factor activity
PJDR2_RS15125	COG1473	amidohydrolase
PJDR2_RS15130	COG1288	antiporter activity
PJDR2_RS15135	COG4948	Mandelate Racemase Muconate Lactonizing
PJDR2_RS15140	COG1011	Hydrolase
PJDR2_RS15145	COG5434	Belongs to the glycosyl hydrolase 28 family
PJDR2_RS15150	COG3250	beta-galactosidase activity
PJDR2_RS15180	COG0640	Transcriptional regulator
PJDR2_RS15185	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
PJDR2_RS15195	COG4533	DNA binding
PJDR2_RS15200	COG4632	Exopolysaccharide biosynthesis protein
PJDR2_RS15200	COG5434	Belongs to the glycosyl hydrolase 28 family
PJDR2_RS15225	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS15230	COG5002	protein histidine kinase activity
PJDR2_RS15235	COG1388	LysM domain
PJDR2_RS15255	COG4977	sequence-specific DNA binding
PJDR2_RS15295	COG0714	Associated with various cellular activities
PJDR2_RS15300	COG2425	protein containing a von Willebrand factor type A (vWA) domain
PJDR2_RS15305	COG3552	Protein containing von Willebrand factor type A (VWA) domain
PJDR2_RS15310	COG2244	polysaccharide biosynthetic process
PJDR2_RS15320	COG0667	Aldo Keto reductase
PJDR2_RS15335	COG2205	protein histidine kinase activity
PJDR2_RS15345	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PJDR2_RS15350	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS15360	COG1349	DNA-binding transcription factor activity
PJDR2_RS15365	COG0561	phosphatase activity
PJDR2_RS15370	COG0738	Major facilitator superfamily
PJDR2_RS15380	COG0740	serine-type endopeptidase activity
PJDR2_RS15385	COG1595	DNA-templated transcription, initiation
PJDR2_RS15390	COG0697	spore germination
PJDR2_RS15405	COG2249	NAD(P)H dehydrogenase (quinone) activity
PJDR2_RS15410	COG1733	regulation of RNA biosynthetic process
PJDR2_RS15425	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PJDR2_RS15440	COG0814	amino acid
PJDR2_RS15445	COG0697	spore germination
PJDR2_RS15450	COG1309	transcriptional regulator
PJDR2_RS15455	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS15465	COG2814	Major facilitator Superfamily
PJDR2_RS15470	COG4974	Belongs to the 'phage' integrase family
PJDR2_RS15475	COG1335	isochorismatase
PJDR2_RS15490	COG1121	(ABC) transporter
PJDR2_RS15495	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PJDR2_RS15500	COG0803	Belongs to the bacterial solute-binding protein 9 family
PJDR2_RS15505	COG0523	cobalamin synthesis protein
PJDR2_RS15530	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS15540	COG0697	spore germination
PJDR2_RS15580	COG5002	protein histidine kinase activity
PJDR2_RS15580	COG0784	Response regulator, receiver
PJDR2_RS15580	COG2198	Histidine kinase
PJDR2_RS15585	COG3250	beta-galactosidase activity
PJDR2_RS15620	COG0154	amidase activity
PJDR2_RS15625	COG0477	Major facilitator Superfamily
PJDR2_RS15630	COG0583	DNA-binding transcription factor activity
PJDR2_RS15635	COG2318	DinB family
PJDR2_RS15640	COG0328	RNA-DNA hybrid ribonuclease activity
PJDR2_RS15660	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS15665	COG5002	protein histidine kinase activity
PJDR2_RS15675	COG0640	Transcriptional regulator
PJDR2_RS15690	COG0583	DNA-binding transcription factor activity
PJDR2_RS15710	COG0697	spore germination
PJDR2_RS15715	COG5646	InterPro IPR014922
PJDR2_RS15720	COG2318	DinB family
PJDR2_RS15730	COG1309	transcriptional regulator
PJDR2_RS15750	COG2217	Heavy metal translocating P-type atpase
PJDR2_RS15760	COG2249	NAD(P)H dehydrogenase (quinone) activity
PJDR2_RS15765	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS15775	COG2070	2-Nitropropane dioxygenase
PJDR2_RS15780	COG0583	DNA-binding transcription factor activity
PJDR2_RS15785	COG0477	Major facilitator Superfamily
PJDR2_RS15790	COG0697	spore germination
PJDR2_RS15810	COG0531	amino acid
PJDR2_RS15815	COG3214	Protein conserved in bacteria
PJDR2_RS15820	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS15825	COG5002	protein histidine kinase activity
PJDR2_RS15825	COG3850	Histidine kinase
PJDR2_RS15840	COG1175	transmembrane transport
PJDR2_RS15845	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS15860	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PJDR2_RS15870	COG0697	spore germination
PJDR2_RS15895	COG1309	transcriptional regulator
PJDR2_RS15900	COG4221	oxidoreductase activity
PJDR2_RS15925	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PJDR2_RS15930	COG4149	molybdate abc transporter
PJDR2_RS15955	COG1472	Belongs to the glycosyl hydrolase 3 family
PJDR2_RS15965	COG1653	transport
PJDR2_RS15970	COG4209	transmembrane transport
PJDR2_RS15975	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS15980	COG1653	transport
PJDR2_RS16005	COG0697	spore germination
PJDR2_RS16020	COG1131	(ABC) transporter
PJDR2_RS16035	COG1215	transferase activity, transferring glycosyl groups
PJDR2_RS16040	COG0297	glycogen (starch) synthase activity
PJDR2_RS16050	COG5002	protein histidine kinase activity
PJDR2_RS16060	COG3848	Pyruvate phosphate dikinase
PJDR2_RS16060	COG0574	Belongs to the PEP-utilizing enzyme family
PJDR2_RS16080	COG0783	Belongs to the Dps family
PJDR2_RS16085	COG1199	ATP-dependent helicase activity
PJDR2_RS16095	COG0129	dihydroxy-acid dehydratase activity
PJDR2_RS16100	COG4876	unkown
PJDR2_RS16105	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS16110	COG3850	Histidine kinase
PJDR2_RS16110	COG5002	protein histidine kinase activity
PJDR2_RS16125	COG2323	membrane
PJDR2_RS16130	COG0768	penicillin binding
PJDR2_RS16135	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS16145	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PJDR2_RS16150	COG1231	oxidoreductase activity
PJDR2_RS16155	COG0477	Major facilitator Superfamily
PJDR2_RS16160	COG2205	protein histidine kinase activity
PJDR2_RS16175	COG5002	protein histidine kinase activity
PJDR2_RS16185	COG0393	Putative heavy-metal-binding
PJDR2_RS16200	COG4753	response regulator
PJDR2_RS16200	COG2207	Transcriptional regulator
PJDR2_RS16215	COG1802	Transcriptional regulator
PJDR2_RS16235	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS16245	COG1733	regulation of RNA biosynthetic process
PJDR2_RS16260	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS16265	COG5002	protein histidine kinase activity
PJDR2_RS16275	COG2249	NAD(P)H dehydrogenase (quinone) activity
PJDR2_RS16280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
PJDR2_RS16285	COG0765	amino acid transport
PJDR2_RS16290	COG1126	abc transporter atp-binding protein
PJDR2_RS16300	COG2207	Transcriptional regulator
PJDR2_RS16315	COG1979	alcohol dehydrogenase
PJDR2_RS16330	COG1131	(ABC) transporter
PJDR2_RS16335	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
PJDR2_RS16365	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
PJDR2_RS16370	COG0024	Methionine aminopeptidase
PJDR2_RS16385	COG2169	Transcriptional regulator
PJDR2_RS16405	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS16410	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PJDR2_RS16410	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PJDR2_RS16415	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PJDR2_RS16420	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PJDR2_RS16430	COG0402	S-adenosylhomocysteine deaminase activity
PJDR2_RS16435	COG0402	S-adenosylhomocysteine deaminase activity
PJDR2_RS16440	COG1794	racemase activity, acting on amino acids and derivatives
PJDR2_RS16445	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS16450	COG1794	racemase activity, acting on amino acids and derivatives
PJDR2_RS16460	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
PJDR2_RS16500	COG1609	Transcriptional regulator
PJDR2_RS16510	COG4209	transmembrane transport
PJDR2_RS16515	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS16525	COG3119	arylsulfatase activity
PJDR2_RS16530	COG3119	arylsulfatase activity
PJDR2_RS16535	COG2162	N-hydroxyarylamine O-acetyltransferase activity
PJDR2_RS16565	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
PJDR2_RS16575	COG3459	Glycosyltransferase 36 associated
PJDR2_RS16595	COG1846	Transcriptional regulator
PJDR2_RS16605	COG0583	DNA-binding transcription factor activity
PJDR2_RS16615	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PJDR2_RS16620	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
PJDR2_RS16625	COG0300	oxidoreductase activity
PJDR2_RS16635	COG1607	acyl-coa hydrolase
PJDR2_RS16640	COG1957	nucleoside hydrolase
PJDR2_RS16645	COG1686	Belongs to the peptidase S11 family
PJDR2_RS16650	COG0561	phosphatase activity
PJDR2_RS16660	COG1988	membrane-bound metal-dependent
PJDR2_RS16665	COG4841	protein insertion into membrane
PJDR2_RS16675	COG1408	metallophosphoesterase
PJDR2_RS16705	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
PJDR2_RS16710	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
PJDR2_RS16715	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
PJDR2_RS16720	COG2351	hydroxyisourate hydrolase activity
PJDR2_RS16730	COG3195	allantoin biosynthetic process
PJDR2_RS16730	COG3648	Uricase
PJDR2_RS16735	COG2080	2 iron, 2 sulfur cluster binding
PJDR2_RS16740	COG1529	Aldehyde oxidase and xanthine dehydrogenase
PJDR2_RS16750	COG1079	Belongs to the binding-protein-dependent transport system permease family
PJDR2_RS16755	COG4603	Belongs to the binding-protein-dependent transport system permease family
PJDR2_RS16760	COG3845	ABC transporter
PJDR2_RS16775	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
PJDR2_RS16780	COG0402	S-adenosylhomocysteine deaminase activity
PJDR2_RS16785	COG2508	Transcriptional regulator
PJDR2_RS16800	COG2814	Major facilitator Superfamily
PJDR2_RS16805	COG0586	Pfam SNARE associated Golgi protein
PJDR2_RS16815	COG3069	C4-dicarboxylate transmembrane transporter activity
PJDR2_RS16825	COG1253	flavin adenine dinucleotide binding
PJDR2_RS16840	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
PJDR2_RS16845	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
PJDR2_RS16860	COG3326	Membrane
PJDR2_RS16865	COG1643	Atp-dependent helicase
PJDR2_RS16875	COG0598	Magnesium transport protein CorA
PJDR2_RS16880	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PJDR2_RS16890	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PJDR2_RS16895	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
PJDR2_RS16900	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
PJDR2_RS16910	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
PJDR2_RS16915	COG1120	ATPase activity
PJDR2_RS16920	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS16925	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS16930	COG2217	Heavy metal translocating P-type atpase
PJDR2_RS16935	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PJDR2_RS16945	COG0393	Putative heavy-metal-binding
PJDR2_RS16955	COG2720	vancomycin resistance protein
PJDR2_RS16965	COG2814	Major facilitator Superfamily
PJDR2_RS16980	COG1268	BioY protein
PJDR2_RS16985	COG1619	proteins homologs of microcin C7 resistance protein MccF
PJDR2_RS16990	COG1979	alcohol dehydrogenase
PJDR2_RS16995	COG4550	Control of competence regulator ComK, YlbF/YmcA
PJDR2_RS17000	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PJDR2_RS17005	COG4869	propanediol catabolic process
PJDR2_RS17010	COG1013	pyruvate-flavodoxin oxidoreductase activity
PJDR2_RS17015	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
PJDR2_RS17015	COG0674	pyruvate-flavodoxin oxidoreductase activity
PJDR2_RS17025	COG2359	stage V sporulation protein S
PJDR2_RS17030	COG1692	metallophosphoesterase
PJDR2_RS17040	COG2137	regulation of response to DNA damage stimulus
PJDR2_RS17045	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PJDR2_RS17050	COG1058	Belongs to the CinA family
PJDR2_RS17050	COG1546	Belongs to the CinA family
PJDR2_RS17055	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PJDR2_RS17065	COG1426	Protein conserved in bacteria
PJDR2_RS17080	COG0300	oxidoreductase activity
PJDR2_RS17085	COG0612	Peptidase, M16
PJDR2_RS17090	COG0612	Peptidase, M16
PJDR2_RS17100	COG4980	gas vesicle protein
PJDR2_RS17100	COG1674	ftsk spoiiie
PJDR2_RS17110	COG0740	serine-type endopeptidase activity
PJDR2_RS17115	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PJDR2_RS17120	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PJDR2_RS17125	COG0527	aspartate kinase activity
PJDR2_RS17130	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PJDR2_RS17135	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PJDR2_RS17140	COG0756	dUTP diphosphatase activity
PJDR2_RS17145	COG0612	Peptidase, M16
PJDR2_RS17150	COG0726	polysaccharide deacetylase
PJDR2_RS17155	COG1185	polyribonucleotide nucleotidyltransferase activity
PJDR2_RS17160	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PJDR2_RS17165	COG0196	riboflavin kinase activity
PJDR2_RS17170	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PJDR2_RS17175	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
PJDR2_RS17180	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PJDR2_RS17185	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PJDR2_RS17185	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PJDR2_RS17190	COG1358	cellular component organization or biogenesis
PJDR2_RS17195	COG2740	Nucleic-acid-binding protein implicated in transcription termination
PJDR2_RS17200	COG0195	Participates in both transcription termination and antitermination
PJDR2_RS17205	COG0779	Required for maturation of 30S ribosomal subunits
PJDR2_RS17210	COG2176	DNA-directed DNA polymerase activity
PJDR2_RS17215	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PJDR2_RS17220	COG0750	zinc metalloprotease
PJDR2_RS17225	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
PJDR2_RS17230	COG4589	Belongs to the CDS family
PJDR2_RS17235	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PJDR2_RS17240	COG0233	cytoplasmic translational termination
PJDR2_RS17245	COG0528	UMP kinase activity
PJDR2_RS17250	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PJDR2_RS17255	COG0052	Belongs to the universal ribosomal protein uS2 family
PJDR2_RS17280	COG1191	sigma factor activity
PJDR2_RS17290	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
PJDR2_RS17300	COG0835	chemotaxis
PJDR2_RS17305	COG0643	Histidine kinase
PJDR2_RS17305	COG2198	Histidine kinase
PJDR2_RS17310	COG2201	protein-glutamate methylesterase activity
PJDR2_RS17315	COG0455	bacterial-type flagellum organization
PJDR2_RS17320	COG1419	protein localization to endoplasmic reticulum
PJDR2_RS17325	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PJDR2_RS17330	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PJDR2_RS17335	COG1684	flagellar biosynthetic protein fliR
PJDR2_RS17340	COG1987	bacterial-type flagellum assembly
PJDR2_RS17345	COG1338	Plays a role in the flagellum-specific transport system
PJDR2_RS17355	COG2201	protein-glutamate methylesterase activity
PJDR2_RS17360	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PJDR2_RS17360	COG1776	CheC inhibitor of MCP methylation
PJDR2_RS17365	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PJDR2_RS17375	COG1582	Flagellar protein (FlbD)
PJDR2_RS17380	COG4786	Flagellar basal body rod
PJDR2_RS17390	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
PJDR2_RS17410	COG1157	protein secretion by the type III secretion system
PJDR2_RS17420	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PJDR2_RS17425	COG1766	The M ring may be actively involved in energy transduction
PJDR2_RS17435	COG1558	bacterial-type flagellum-dependent cell motility
PJDR2_RS17440	COG1815	bacterial-type flagellum-dependent cell motility
PJDR2_RS17445	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PJDR2_RS17450	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PJDR2_RS17455	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PJDR2_RS17460	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PJDR2_RS17465	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PJDR2_RS17470	COG0758	DNA mediated transformation
PJDR2_RS17475	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PJDR2_RS17480	COG0045	succinate-CoA ligase (ADP-forming) activity
PJDR2_RS17485	COG0606	chelatase, subunit chli
PJDR2_RS17490	COG0792	nuclease activity
PJDR2_RS17495	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PJDR2_RS17510	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PJDR2_RS17515	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PJDR2_RS17525	COG0335	large ribosomal subunit rRNA binding
PJDR2_RS17545	COG0336	Belongs to the RNA methyltransferase TrmD family
PJDR2_RS17550	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PJDR2_RS17555	COG1837	Belongs to the UPF0109 family
PJDR2_RS17560	COG0228	four-way junction DNA binding
PJDR2_RS17565	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PJDR2_RS17570	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PJDR2_RS17575	COG0552	protein localization to endoplasmic reticulum
PJDR2_RS17580	COG1196	nuclear chromosome segregation
PJDR2_RS17590	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
PJDR2_RS17595	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PJDR2_RS17600	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS17605	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
PJDR2_RS17615	COG0416	fatty acid biosynthetic process
PJDR2_RS17625	COG0333	Belongs to the bacterial ribosomal protein bL32 family
PJDR2_RS17635	COG1323	Belongs to the UPF0348 family
PJDR2_RS17645	COG3314	Sporulation integral membrane protein YlbJ
PJDR2_RS17650	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PJDR2_RS17655	COG0742	ribosomal rna small subunit methyltransferase
PJDR2_RS17665	COG1376	ErfK ybiS ycfS ynhG family protein
PJDR2_RS17675	COG0084	hydrolase, TatD family'
PJDR2_RS17680	COG1116	anion transmembrane transporter activity
PJDR2_RS17685	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS17695	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PJDR2_RS17710	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
PJDR2_RS17710	COG0662	Cupin 2, conserved barrel domain protein
PJDR2_RS17760	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PJDR2_RS17765	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PJDR2_RS17770	COG0069	glutamate synthase activity
PJDR2_RS17780	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PJDR2_RS17785	COG1349	DNA-binding transcription factor activity
PJDR2_RS17790	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS17805	COG0038	chloride channel
PJDR2_RS17810	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS17815	COG1175	transmembrane transport
PJDR2_RS17820	COG1653	transport
PJDR2_RS17825	COG4753	response regulator
PJDR2_RS17825	COG2207	Transcriptional regulator
PJDR2_RS17830	COG2972	Histidine kinase
PJDR2_RS17835	COG1070	Carbohydrate kinase
PJDR2_RS17840	COG4806	L-rhamnose isomerase
PJDR2_RS17845	COG3347	Dehydrogenase
PJDR2_RS17845	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS17850	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS17860	COG2207	Transcriptional regulator
PJDR2_RS17860	COG0662	Cupin 2, conserved barrel domain protein
PJDR2_RS17865	COG1414	Transcriptional regulator
PJDR2_RS17880	COG0004	ammonium transporteR
PJDR2_RS17885	COG0347	Belongs to the P(II) protein family
PJDR2_RS17890	COG0519	Catalyzes the synthesis of GMP from XMP
PJDR2_RS17890	COG0518	GMP synthase (glutamine-hydrolyzing) activity
PJDR2_RS17905	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PJDR2_RS17915	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS17935	COG0697	spore germination
PJDR2_RS17960	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS17960	COG2169	Transcriptional regulator
PJDR2_RS17965	COG2909	trisaccharide binding
PJDR2_RS17970	COG1361	Conserved repeat domain
PJDR2_RS17975	COG2207	Transcriptional regulator
PJDR2_RS17975	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS17985	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS18005	COG1063	alcohol dehydrogenase
PJDR2_RS18010	COG0667	Aldo Keto reductase
PJDR2_RS18055	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PJDR2_RS18075	COG1063	alcohol dehydrogenase
PJDR2_RS18080	COG1609	Transcriptional regulator
PJDR2_RS18085	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS18090	COG1175	transmembrane transport
PJDR2_RS18100	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
PJDR2_RS18110	COG1070	Carbohydrate kinase
PJDR2_RS18120	COG2207	Transcriptional regulator
PJDR2_RS18120	COG4753	response regulator
PJDR2_RS18125	COG2972	Histidine kinase
PJDR2_RS18130	COG1653	transport
PJDR2_RS18145	COG0531	amino acid
PJDR2_RS18155	COG0697	spore germination
PJDR2_RS18160	COG0596	Alpha beta hydrolase
PJDR2_RS18165	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS18165	COG2207	Transcriptional regulator
PJDR2_RS18180	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS18185	COG4209	transmembrane transport
PJDR2_RS18210	COG2207	Transcriptional regulator
PJDR2_RS18230	COG0402	S-adenosylhomocysteine deaminase activity
PJDR2_RS18255	COG0402	S-adenosylhomocysteine deaminase activity
PJDR2_RS18260	COG2508	Transcriptional regulator
PJDR2_RS18270	COG1492	cobalamin metabolic process
PJDR2_RS18275	COG1132	(ABC) transporter
PJDR2_RS18280	COG1132	(ABC) transporter
PJDR2_RS18290	COG1472	Belongs to the glycosyl hydrolase 3 family
PJDR2_RS18300	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS18305	COG4209	transmembrane transport
PJDR2_RS18310	COG1653	transport
PJDR2_RS18315	COG2207	Transcriptional regulator
PJDR2_RS18320	COG2972	Histidine kinase
PJDR2_RS18325	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
PJDR2_RS18330	COG3395	kinase activity
PJDR2_RS18345	COG2207	Transcriptional regulator
PJDR2_RS18365	COG2207	Transcriptional regulator
PJDR2_RS18365	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS18385	COG2112	serine threonine protein kinase
PJDR2_RS18395	COG0628	permease
PJDR2_RS18410	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS18415	COG4209	transmembrane transport
PJDR2_RS18420	COG1653	transport
PJDR2_RS18425	COG2207	Transcriptional regulator
PJDR2_RS18470	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS18495	COG3507	Belongs to the glycosyl hydrolase 43 family
PJDR2_RS18505	COG2814	Major facilitator Superfamily
PJDR2_RS18520	COG1361	Conserved repeat domain
PJDR2_RS18525	COG1472	Belongs to the glycosyl hydrolase 3 family
PJDR2_RS18530	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS18565	COG1653	transport
PJDR2_RS18570	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS18575	COG4209	transmembrane transport
PJDR2_RS18580	COG2207	Transcriptional regulator
PJDR2_RS18590	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS18600	COG0667	Aldo Keto reductase
PJDR2_RS18605	COG0789	Transcriptional regulator
PJDR2_RS18610	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PJDR2_RS18615	COG1971	Probably functions as a manganese efflux pump
PJDR2_RS18620	COG2814	Major facilitator Superfamily
PJDR2_RS18630	COG1064	alcohol dehydrogenase
PJDR2_RS18635	COG1309	transcriptional regulator
PJDR2_RS18640	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PJDR2_RS18665	COG1175	transmembrane transport
PJDR2_RS18670	COG4753	response regulator
PJDR2_RS18670	COG2207	Transcriptional regulator
PJDR2_RS18680	COG1609	Transcriptional regulator
PJDR2_RS18740	COG4608	Belongs to the ABC transporter superfamily
PJDR2_RS18745	COG0444	Belongs to the ABC transporter superfamily
PJDR2_RS18750	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PJDR2_RS18755	COG0601	transmembrane transport
PJDR2_RS18760	COG0747	negative chemotaxis
PJDR2_RS18770	COG1175	transmembrane transport
PJDR2_RS18775	COG1653	transport
PJDR2_RS18780	COG4753	response regulator
PJDR2_RS18780	COG2207	Transcriptional regulator
PJDR2_RS18785	COG2972	Histidine kinase
PJDR2_RS18800	COG3507	Belongs to the glycosyl hydrolase 43 family
PJDR2_RS18810	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS18815	COG4209	transmembrane transport
PJDR2_RS18820	COG2207	Transcriptional regulator
PJDR2_RS18820	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS18830	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PJDR2_RS18840	COG2135	peptidase activity
PJDR2_RS18850	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PJDR2_RS18855	COG1307	EDD domain protein, DegV family
PJDR2_RS18860	COG1461	Dihydroxyacetone kinase
PJDR2_RS18865	COG1302	Protein conserved in bacteria
PJDR2_RS18870	COG0227	Belongs to the bacterial ribosomal protein bL28 family
PJDR2_RS18885	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
PJDR2_RS18890	COG1162	GTPase activity
PJDR2_RS18895	COG2815	serine threonine protein kinase
PJDR2_RS18895	COG0515	serine threonine protein kinase
PJDR2_RS18900	COG0631	protein serine/threonine phosphatase activity
PJDR2_RS18905	COG0820	rRNA (adenine-C2-)-methyltransferase activity
PJDR2_RS18910	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PJDR2_RS18910	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PJDR2_RS18915	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PJDR2_RS18920	COG0242	peptide deformylase activity
PJDR2_RS18925	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PJDR2_RS18930	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PJDR2_RS18935	COG0484	heat shock protein binding
PJDR2_RS18945	COG1556	Lactate utilization protein
PJDR2_RS18950	COG1139	Iron-sulfur cluster binding protein
PJDR2_RS18955	COG0247	lactate metabolic process
PJDR2_RS18960	COG1349	DNA-binding transcription factor activity
PJDR2_RS18965	COG1758	RNA polymerase activity
PJDR2_RS18970	COG0194	GDP metabolic process
PJDR2_RS18975	COG2052	Domain of unknown function (DUF370)
PJDR2_RS18980	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
PJDR2_RS18980	COG0646	methionine synthase
PJDR2_RS18985	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PJDR2_RS18990	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
PJDR2_RS19005	COG0613	PHP domain protein
PJDR2_RS19010	COG0583	DNA-binding transcription factor activity
PJDR2_RS19020	COG4471	UPF0298 protein
PJDR2_RS19040	COG0517	IMP dehydrogenase activity
PJDR2_RS19045	COG1473	amidohydrolase
PJDR2_RS19055	COG0772	Belongs to the SEDS family
PJDR2_RS19060	COG1302	Protein conserved in bacteria
PJDR2_RS19065	COG0387	Pfam Sodium calcium exchanger
PJDR2_RS19070	COG4838	Belongs to the UPF0358 family
PJDR2_RS19080	COG2309	aminopeptidase activity
PJDR2_RS19090	COG2203	Gaf domain
PJDR2_RS19090	COG2199	diguanylate cyclase activity
PJDR2_RS19095	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PJDR2_RS19100	COG4106	trans-aconitate 2-methyltransferase activity
PJDR2_RS19105	COG2268	Band 7 protein
PJDR2_RS19120	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
PJDR2_RS19125	COG0454	-acetyltransferase
PJDR2_RS19130	COG0123	including yeast histone deacetylase and acetoin utilization protein
PJDR2_RS19155	COG0693	protein deglycase activity
PJDR2_RS19160	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PJDR2_RS19170	COG1832	CoA-binding protein
PJDR2_RS19175	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
PJDR2_RS19180	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PJDR2_RS19190	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PJDR2_RS19200	COG0442	prolyl-tRNA aminoacylation
PJDR2_RS19205	COG4493	Belongs to the UPF0637 family
PJDR2_RS19210	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PJDR2_RS19215	COG1131	(ABC) transporter
PJDR2_RS19220	COG0842	Transport permease protein
PJDR2_RS19220	COG1511	domain protein
PJDR2_RS19230	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PJDR2_RS19240	COG1982	Orn Lys Arg decarboxylase major
PJDR2_RS19265	COG1234	tRNA 3'-trailer cleavage
PJDR2_RS19310	COG4753	response regulator
PJDR2_RS19310	COG2207	Transcriptional regulator
PJDR2_RS19315	COG2972	Histidine kinase
PJDR2_RS19320	COG1653	transport
PJDR2_RS19325	COG1175	transmembrane transport
PJDR2_RS19330	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS19340	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PJDR2_RS19350	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
PJDR2_RS19385	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PJDR2_RS19390	COG0328	RNA-DNA hybrid ribonuclease activity
PJDR2_RS19390	COG3341	Caulimovirus viroplasmin
PJDR2_RS19410	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
PJDR2_RS19420	COG0577	efflux transmembrane transporter activity
PJDR2_RS19420	COG1136	(ABC) transporter
PJDR2_RS19435	COG1136	(ABC) transporter
PJDR2_RS19440	COG0840	transmembrane signaling receptor activity
PJDR2_RS19455	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
PJDR2_RS19465	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
PJDR2_RS19470	COG0540	Belongs to the ATCase OTCase family
PJDR2_RS19475	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PJDR2_RS19480	COG0436	Aminotransferase
PJDR2_RS19485	COG1473	amidohydrolase
PJDR2_RS19490	COG2171	N-acyltransferase activity
PJDR2_RS19495	COG0564	pseudouridine synthase activity
PJDR2_RS19500	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PJDR2_RS19505	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
PJDR2_RS19520	COG3599	regulation of cell shape
PJDR2_RS19525	COG2302	S4 RNA-binding domain
PJDR2_RS19530	COG0762	integral membrane protein
PJDR2_RS19535	COG1799	cell septum assembly
PJDR2_RS19540	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PJDR2_RS19545	COG1496	oxidoreductase activity
PJDR2_RS19550	COG1873	PFAM PRC-barrel domain
PJDR2_RS19555	COG1191	sigma factor activity
PJDR2_RS19560	COG1191	sigma factor activity
PJDR2_RS19575	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PJDR2_RS19580	COG0849	cell division
PJDR2_RS19585	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
PJDR2_RS19590	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PJDR2_RS19595	COG0812	UDP-N-acetylmuramate dehydrogenase activity
PJDR2_RS19600	COG0772	Belongs to the SEDS family
PJDR2_RS19605	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PJDR2_RS19610	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PJDR2_RS19615	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
PJDR2_RS19625	COG0768	penicillin binding
PJDR2_RS19630	COG0768	penicillin binding
PJDR2_RS19640	COG0275	rRNA processing
PJDR2_RS19645	COG2001	Belongs to the MraZ family
PJDR2_RS19660	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
PJDR2_RS19665	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
PJDR2_RS19670	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
PJDR2_RS19680	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PJDR2_RS19710	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
PJDR2_RS19725	COG1316	TRANSCRIPTIONal
PJDR2_RS19740	COG1217	gtp-binding protein TYPA
PJDR2_RS19750	COG0861	Integral membrane protein TerC family
PJDR2_RS19755	COG0861	Integral membrane protein TerC family
PJDR2_RS19760	COG0301	tRNA thio-modification
PJDR2_RS19765	COG1104	cysteine desulfurase activity
PJDR2_RS19770	COG0741	lytic transglycosylase activity
PJDR2_RS19795	COG1131	(ABC) transporter
PJDR2_RS19800	COG1725	Transcriptional regulator
PJDR2_RS19810	COG1131	(ABC) transporter
PJDR2_RS19820	COG0840	transmembrane signaling receptor activity
PJDR2_RS19840	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
PJDR2_RS19860	COG0277	FAD linked oxidase domain protein
PJDR2_RS19930	COG0842	Transport permease protein
PJDR2_RS19930	COG1129	ABC transporter
PJDR2_RS19935	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS19940	COG1175	transmembrane transport
PJDR2_RS19960	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS19960	COG2207	Transcriptional regulator
PJDR2_RS19965	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
PJDR2_RS19970	COG1132	(ABC) transporter
PJDR2_RS19975	COG1132	(ABC) transporter
PJDR2_RS19990	COG1131	(ABC) transporter
PJDR2_RS20005	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
PJDR2_RS20010	COG1131	(ABC) transporter
PJDR2_RS20015	COG2814	Major facilitator Superfamily
PJDR2_RS20020	COG0697	spore germination
PJDR2_RS20025	COG0583	DNA-binding transcription factor activity
PJDR2_RS20035	COG1082	Xylose isomerase domain protein TIM barrel
PJDR2_RS20075	COG1879	ABC-type sugar transport system periplasmic component
PJDR2_RS20080	COG1172	Belongs to the binding-protein-dependent transport system permease family
PJDR2_RS20085	COG1129	ABC transporter
PJDR2_RS20090	COG1869	D-ribose catabolic process
PJDR2_RS20095	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PJDR2_RS20100	COG1609	Transcriptional regulator
PJDR2_RS20115	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
PJDR2_RS20140	COG2861	carbohydrate metabolic process
PJDR2_RS20165	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PJDR2_RS20175	COG3949	Membrane
PJDR2_RS20180	COG4717	serine-type aminopeptidase activity
PJDR2_RS20185	COG0420	3'-5' exonuclease activity
PJDR2_RS20190	COG0438	transferase activity, transferring glycosyl groups
PJDR2_RS20205	COG1011	Hydrolase
PJDR2_RS20210	COG0384	phenazine biosynthesis protein PhzF
PJDR2_RS20220	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PJDR2_RS20225	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PJDR2_RS20230	COG1780	Probably involved in ribonucleotide reductase function
PJDR2_RS20245	COG2890	protein-(glutamine-N5) methyltransferase activity
PJDR2_RS20250	COG2996	Protein conserved in bacteria
PJDR2_RS20255	COG0799	negative regulation of ribosome biogenesis
PJDR2_RS20260	COG1713	HD superfamily hydrolase involved in NAD metabolism
PJDR2_RS20265	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PJDR2_RS20270	COG1534	Rna-binding protein
PJDR2_RS20275	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PJDR2_RS20280	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PJDR2_RS20285	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
PJDR2_RS20290	COG1305	Transglutaminase-like
PJDR2_RS20300	COG0714	Associated with various cellular activities
PJDR2_RS20305	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PJDR2_RS20305	COG0392	lysyltransferase activity
PJDR2_RS20315	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PJDR2_RS20330	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PJDR2_RS20340	COG2323	membrane
PJDR2_RS20355	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
PJDR2_RS20365	COG4753	response regulator
PJDR2_RS20365	COG2207	Transcriptional regulator
PJDR2_RS20370	COG2972	Histidine kinase
PJDR2_RS20380	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS20385	COG1175	transmembrane transport
PJDR2_RS20405	COG3708	Transcriptional regulator
PJDR2_RS20405	COG2207	Transcriptional regulator
PJDR2_RS20435	COG1285	pathogenesis
PJDR2_RS20460	COG2207	Transcriptional regulator
PJDR2_RS20460	COG4753	response regulator
PJDR2_RS20465	COG2972	Histidine kinase
PJDR2_RS20475	COG3940	Belongs to the glycosyl hydrolase 43 family
PJDR2_RS20480	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS20495	COG3250	beta-galactosidase activity
PJDR2_RS20515	COG2186	Transcriptional regulator
PJDR2_RS20525	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
PJDR2_RS20540	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS20545	COG4209	transmembrane transport
PJDR2_RS20550	COG1653	transport
PJDR2_RS20555	COG2204	response regulator
PJDR2_RS20570	COG3250	beta-galactosidase activity
PJDR2_RS20575	COG2207	Transcriptional regulator
PJDR2_RS20580	COG0583	DNA-binding transcription factor activity
PJDR2_RS20585	COG2233	PERMEase
PJDR2_RS20600	COG0028	Belongs to the TPP enzyme family
PJDR2_RS20635	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS20640	COG2755	lipolytic protein G-D-S-L family
PJDR2_RS20665	COG2207	Transcriptional regulator
PJDR2_RS20670	COG1653	transport
PJDR2_RS20675	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS20680	COG4209	transmembrane transport
PJDR2_RS20685	COG1874	Beta-galactosidase
PJDR2_RS20690	COG1361	Conserved repeat domain
PJDR2_RS20695	COG3507	Belongs to the glycosyl hydrolase 43 family
PJDR2_RS20700	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS20705	COG4209	transmembrane transport
PJDR2_RS20710	COG1653	transport
PJDR2_RS20720	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
PJDR2_RS20730	COG0697	spore germination
PJDR2_RS20745	COG2814	Major facilitator Superfamily
PJDR2_RS20750	COG1309	transcriptional regulator
PJDR2_RS20805	COG2972	Histidine kinase
PJDR2_RS20820	COG1653	transport
PJDR2_RS20825	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS20830	COG4209	transmembrane transport
PJDR2_RS20890	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
PJDR2_RS20895	COG0709	Synthesizes selenophosphate from selenide and ATP
PJDR2_RS20900	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PJDR2_RS20910	COG3119	arylsulfatase activity
PJDR2_RS20915	COG4172	Belongs to the ABC transporter superfamily
PJDR2_RS20920	COG0444	Belongs to the ABC transporter superfamily
PJDR2_RS20930	COG0601	transmembrane transport
PJDR2_RS20935	COG4166	transmembrane transport
PJDR2_RS20940	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS20940	COG4977	sequence-specific DNA binding
PJDR2_RS20980	COG0438	transferase activity, transferring glycosyl groups
PJDR2_RS21000	COG0438	transferase activity, transferring glycosyl groups
PJDR2_RS21010	COG0789	Transcriptional regulator
PJDR2_RS21015	COG1064	alcohol dehydrogenase
PJDR2_RS21020	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
PJDR2_RS21030	COG2207	Transcriptional regulator
PJDR2_RS21030	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS21035	COG2207	Transcriptional regulator
PJDR2_RS21045	COG3250	beta-galactosidase activity
PJDR2_RS21060	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS21065	COG4209	transmembrane transport
PJDR2_RS21070	COG1653	transport
PJDR2_RS21075	COG2207	Transcriptional regulator
PJDR2_RS21080	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
PJDR2_RS21085	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS21085	COG2207	Transcriptional regulator
PJDR2_RS21105	COG3525	Glycosyl hydrolase, family 20, catalytic domain
PJDR2_RS21105	COG3291	Pkd domain containing protein
PJDR2_RS21125	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS21130	COG4209	transmembrane transport
PJDR2_RS21165	COG1609	Transcriptional regulator
PJDR2_RS21180	COG0531	amino acid
PJDR2_RS21185	COG0697	spore germination
PJDR2_RS21205	COG1230	cation diffusion facilitator family transporter
PJDR2_RS21210	COG2323	membrane
PJDR2_RS21230	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS21235	COG1175	transmembrane transport
PJDR2_RS21240	COG1312	Catalyzes the dehydration of D-mannonate
PJDR2_RS21255	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS21260	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS21265	COG4948	Mandelate Racemase Muconate Lactonizing
PJDR2_RS21275	COG0667	Aldo Keto reductase
PJDR2_RS21280	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS21285	COG1175	transmembrane transport
PJDR2_RS21295	COG2207	Transcriptional regulator
PJDR2_RS21295	COG4753	response regulator
PJDR2_RS21300	COG2972	Histidine kinase
PJDR2_RS21305	COG2962	Rard protein
PJDR2_RS21310	COG2197	response regulator
PJDR2_RS21320	COG1131	(ABC) transporter
PJDR2_RS21335	COG0488	(ABC) transporter
PJDR2_RS21350	COG2895	sulfate adenylyltransferase (ATP) activity
PJDR2_RS21355	COG0175	sulfate reduction
PJDR2_RS21380	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS21385	COG1175	transmembrane transport
PJDR2_RS21405	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS21410	COG1175	transmembrane transport
PJDR2_RS21435	COG1136	(ABC) transporter
PJDR2_RS21445	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PJDR2_RS21450	COG1136	(ABC) transporter
PJDR2_RS21450	COG0577	efflux transmembrane transporter activity
PJDR2_RS21465	COG3507	Belongs to the glycosyl hydrolase 43 family
PJDR2_RS21475	COG1132	(ABC) transporter
PJDR2_RS21480	COG3345	alpha-galactosidase
PJDR2_RS21490	COG2207	Transcriptional regulator
PJDR2_RS21495	COG3507	Belongs to the glycosyl hydrolase 43 family
PJDR2_RS21500	COG2207	Transcriptional regulator
PJDR2_RS21500	COG4753	response regulator
PJDR2_RS21505	COG3275	phosphorelay sensor kinase activity
PJDR2_RS21540	COG2972	Histidine kinase
PJDR2_RS21555	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS21560	COG4209	transmembrane transport
PJDR2_RS21575	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS21585	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS21590	COG1175	transmembrane transport
PJDR2_RS21600	COG2207	Transcriptional regulator
PJDR2_RS21600	COG4753	response regulator
PJDR2_RS21605	COG2972	Histidine kinase
PJDR2_RS21615	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS21630	COG4221	oxidoreductase activity
PJDR2_RS21715	COG1914	H( )-stimulated, divalent metal cation uptake system
PJDR2_RS21720	COG3773	Cell wall hydrolase
PJDR2_RS21735	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PJDR2_RS21745	COG0720	synthase
PJDR2_RS21755	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
PJDR2_RS21780	COG1846	Transcriptional regulator
PJDR2_RS21785	COG0829	nickel cation binding
PJDR2_RS21790	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
PJDR2_RS21800	COG0804	urea catabolic process
PJDR2_RS21805	COG0832	Belongs to the urease beta subunit family
PJDR2_RS21810	COG0831	urea catabolic process
PJDR2_RS21815	COG4211	Belongs to the binding-protein-dependent transport system permease family
PJDR2_RS21835	COG2972	Histidine kinase
PJDR2_RS21840	COG2207	Transcriptional regulator
PJDR2_RS21845	COG0129	dihydroxy-acid dehydratase activity
PJDR2_RS21860	COG0768	penicillin binding
PJDR2_RS21865	COG0840	transmembrane signaling receptor activity
PJDR2_RS21870	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PJDR2_RS21880	COG3906	Belongs to the UPF0473 family
PJDR2_RS21890	COG4472	Bacterial protein of unknown function (DUF965)
PJDR2_RS21905	COG1349	DNA-binding transcription factor activity
PJDR2_RS21910	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
PJDR2_RS21915	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PJDR2_RS21915	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
PJDR2_RS21925	COG3842	ATPase activity
PJDR2_RS21930	COG1840	ABC-type Fe3 transport system, periplasmic component
PJDR2_RS21945	COG1104	cysteine desulfurase activity
PJDR2_RS21950	COG1959	2 iron, 2 sulfur cluster binding
PJDR2_RS21955	COG0482	sulfurtransferase activity
PJDR2_RS21960	COG1253	flavin adenine dinucleotide binding
PJDR2_RS21980	COG1063	alcohol dehydrogenase
PJDR2_RS21985	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS21990	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS21995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS22000	COG1120	ATPase activity
PJDR2_RS22010	COG3290	protein histidine kinase activity
PJDR2_RS22015	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
PJDR2_RS22035	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
PJDR2_RS22040	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PJDR2_RS22045	COG0124	histidyl-tRNA synthetase
PJDR2_RS22050	COG1490	D-aminoacyl-tRNA deacylase activity
PJDR2_RS22055	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PJDR2_RS22060	COG3275	phosphorelay sensor kinase activity
PJDR2_RS22065	COG4753	response regulator
PJDR2_RS22065	COG2207	Transcriptional regulator
PJDR2_RS22075	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS22080	COG4209	transmembrane transport
PJDR2_RS22085	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PJDR2_RS22090	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
PJDR2_RS22090	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
PJDR2_RS22095	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PJDR2_RS22110	COG2244	polysaccharide biosynthetic process
PJDR2_RS22115	COG2323	membrane
PJDR2_RS22130	COG1862	Preprotein translocase
PJDR2_RS22135	COG0343	queuine tRNA-ribosyltransferase activity
PJDR2_RS22140	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PJDR2_RS22145	COG2385	sporulation resulting in formation of a cellular spore
PJDR2_RS22145	COG2385	sporulation resulting in formation of a cellular spore
PJDR2_RS22150	COG3011	Protein conserved in bacteria
PJDR2_RS22155	COG2255	four-way junction helicase activity
PJDR2_RS22160	COG0632	four-way junction helicase activity
PJDR2_RS22165	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PJDR2_RS22180	COG0077	Prephenate dehydratase
PJDR2_RS22185	COG0083	homoserine kinase activity
PJDR2_RS22190	COG0460	homoserine dehydrogenase
PJDR2_RS22195	COG4492	Belongs to the UPF0735 family
PJDR2_RS22200	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PJDR2_RS22215	COG2868	ribosomal protein
PJDR2_RS22220	COG0261	This protein binds to 23S rRNA in the presence of protein L20
PJDR2_RS22230	COG1994	Peptidase M50
PJDR2_RS22245	COG0772	Belongs to the SEDS family
PJDR2_RS22250	COG2894	cell division
PJDR2_RS22255	COG0850	regulation of cytokinetic process
PJDR2_RS22270	COG1077	Cell shape determining protein MreB Mrl
PJDR2_RS22275	COG2003	Belongs to the UPF0758 family
PJDR2_RS22280	COG0424	maF-like protein
PJDR2_RS22295	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
PJDR2_RS22300	COG0285	dihydrofolate synthase activity
PJDR2_RS22305	COG0525	valine-tRNA ligase activity
PJDR2_RS22310	COG2814	Major facilitator Superfamily
PJDR2_RS22315	COG1309	transcriptional regulator
PJDR2_RS22320	COG1388	LysM domain
PJDR2_RS22320	COG1388	LysM domain
PJDR2_RS22325	COG0564	pseudouridine synthase activity
PJDR2_RS22330	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
PJDR2_RS22335	COG0113	porphobilinogen synthase activity
PJDR2_RS22350	COG1648	precorrin-2 dehydrogenase activity
PJDR2_RS22350	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
PJDR2_RS22355	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
PJDR2_RS22365	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PJDR2_RS22375	COG0218	Necessary for normal cell division and for the maintenance of normal septation
PJDR2_RS22385	COG1067	ATP-dependent peptidase activity
PJDR2_RS22385	COG0470	DNA polymerase III
PJDR2_RS22395	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PJDR2_RS22400	COG0740	serine-type endopeptidase activity
PJDR2_RS22405	COG0544	peptidyl-prolyl cis-trans isomerase activity
PJDR2_RS22420	COG1733	regulation of RNA biosynthetic process
PJDR2_RS22425	COG0778	Nitroreductase
PJDR2_RS22440	COG0367	asparagine synthase
PJDR2_RS22445	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PJDR2_RS22450	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PJDR2_RS22455	COG5401	PFAM Sporulation and spore germination
PJDR2_RS22460	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
PJDR2_RS22465	COG0529	Catalyzes the synthesis of activated sulfate
PJDR2_RS22480	COG1304	FMN binding
PJDR2_RS22485	COG0363	glucosamine-6-phosphate deaminase activity
PJDR2_RS22490	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PJDR2_RS22495	COG1349	DNA-binding transcription factor activity
PJDR2_RS22500	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PJDR2_RS22510	COG0514	ATP-dependent DNA helicase (RecQ)
PJDR2_RS22515	COG0039	L-malate dehydrogenase activity
PJDR2_RS22520	COG0538	isocitrate dehydrogenase activity
PJDR2_RS22525	COG0372	Belongs to the citrate synthase family
PJDR2_RS22535	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PJDR2_RS22540	COG0824	Thioesterase
PJDR2_RS22550	COG0825	malonyl-CoA metabolic process
PJDR2_RS22555	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PJDR2_RS22565	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
PJDR2_RS22595	COG4109	DRTGG domain
PJDR2_RS22615	COG0189	ligase activity
PJDR2_RS22620	COG0189	ligase activity
PJDR2_RS22625	COG0189	ligase activity
PJDR2_RS22630	COG0189	ligase activity
PJDR2_RS22645	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS22650	COG5002	protein histidine kinase activity
PJDR2_RS22655	COG0546	phosphoglycolate phosphatase activity
PJDR2_RS22670	COG4175	Glycine betaine
PJDR2_RS22670	COG0517	IMP dehydrogenase activity
PJDR2_RS22675	COG1510	regulation of RNA biosynthetic process
PJDR2_RS22690	COG0110	maltose O-acetyltransferase activity
PJDR2_RS22700	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS22700	COG2207	Transcriptional regulator
PJDR2_RS22705	COG5522	Integral membrane protein (intg_mem_TP0381)
PJDR2_RS22715	COG1595	DNA-templated transcription, initiation
PJDR2_RS22720	COG0583	DNA-binding transcription factor activity
PJDR2_RS22725	COG0697	spore germination
PJDR2_RS22740	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PJDR2_RS22745	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
PJDR2_RS22750	COG0667	Aldo Keto reductase
PJDR2_RS22795	COG3511	phospholipase C
PJDR2_RS22805	COG1272	protein, Hemolysin III
PJDR2_RS22845	COG0583	DNA-binding transcription factor activity
PJDR2_RS22850	COG2814	Major facilitator Superfamily
PJDR2_RS22860	COG0778	Nitroreductase
PJDR2_RS22890	COG1228	amidohydrolase
PJDR2_RS22905	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PJDR2_RS22930	COG3546	catalase activity
PJDR2_RS22955	COG0110	maltose O-acetyltransferase activity
PJDR2_RS22960	COG2207	Transcriptional regulator
PJDR2_RS22965	COG0598	Magnesium transport protein CorA
PJDR2_RS23055	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
PJDR2_RS23075	COG1278	Cold shock
PJDR2_RS23080	COG0778	Nitroreductase
PJDR2_RS23095	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS23180	COG1361	Conserved repeat domain
PJDR2_RS23190	COG3546	catalase activity
PJDR2_RS23210	COG0628	permease
PJDR2_RS23215	COG0535	radical SAM domain protein
PJDR2_RS23220	COG2199	diguanylate cyclase activity
PJDR2_RS23220	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
PJDR2_RS23225	COG0737	Belongs to the 5'-nucleotidase family
PJDR2_RS23230	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PJDR2_RS23235	COG0314	molybdopterin synthase activity
PJDR2_RS23245	COG0719	Fe-S assembly protein
PJDR2_RS23250	COG0822	iron-sulfur transferase activity
PJDR2_RS23255	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PJDR2_RS23260	COG0719	Fe-S assembly protein
PJDR2_RS23265	COG0396	ATPase activity
PJDR2_RS23275	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
PJDR2_RS23280	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
PJDR2_RS23285	COG3377	Domain of unknown function (DUF1805)
PJDR2_RS23295	COG3300	MHYT domain
PJDR2_RS23295	COG5001	Diguanylate cyclase
PJDR2_RS23300	COG2363	Small membrane protein
PJDR2_RS23315	COG0419	ATPase involved in DNA repair
PJDR2_RS23320	COG0420	3'-5' exonuclease activity
PJDR2_RS23330	COG2910	NAD(P)H-binding
PJDR2_RS23335	COG1959	2 iron, 2 sulfur cluster binding
PJDR2_RS23340	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PJDR2_RS23355	COG1349	DNA-binding transcription factor activity
PJDR2_RS23360	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS23365	COG2207	Transcriptional regulator
PJDR2_RS23380	COG1653	transport
PJDR2_RS23385	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS23390	COG4209	transmembrane transport
PJDR2_RS23400	COG3275	phosphorelay sensor kinase activity
PJDR2_RS23420	COG1653	transport
PJDR2_RS23425	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS23455	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PJDR2_RS23505	COG1486	melibiose metabolic process
PJDR2_RS23530	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
PJDR2_RS23570	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
PJDR2_RS23585	COG2508	Transcriptional regulator
PJDR2_RS23600	COG0167	dihydroorotate dehydrogenase activity
PJDR2_RS23620	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PJDR2_RS23625	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS23630	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS23640	COG3250	beta-galactosidase activity
PJDR2_RS23660	COG3275	phosphorelay sensor kinase activity
PJDR2_RS23665	COG4753	response regulator
PJDR2_RS23665	COG2207	Transcriptional regulator
PJDR2_RS23670	COG2718	Belongs to the UPF0229 family
PJDR2_RS23695	COG0456	acetyltransferase
PJDR2_RS23705	COG0277	FAD linked oxidase domain protein
PJDR2_RS23725	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PJDR2_RS23740	COG1464	Belongs to the NlpA lipoprotein family
PJDR2_RS23745	COG2066	Belongs to the glutaminase family
PJDR2_RS23755	COG3481	metal-dependent phosphohydrolase, HD sub domain
PJDR2_RS23780	COG0567	Dehydrogenase, E1 component
PJDR2_RS23785	COG0508	dehydrogenase complex catalyzes the overall conversion of
PJDR2_RS23820	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS23825	COG4209	transmembrane transport
PJDR2_RS23830	COG2204	response regulator
PJDR2_RS23835	COG3275	phosphorelay sensor kinase activity
PJDR2_RS23840	COG2719	SpoVR family
PJDR2_RS23860	COG2719	SpoVR family
PJDR2_RS23870	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
PJDR2_RS23875	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
PJDR2_RS23880	COG0514	ATP-dependent DNA helicase (RecQ)
PJDR2_RS23895	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PJDR2_RS23920	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
PJDR2_RS23950	COG1196	nuclear chromosome segregation
PJDR2_RS23955	COG2719	SpoVR family
PJDR2_RS23990	COG2308	Evidence 4 Homologs of previously reported genes of
PJDR2_RS23995	COG0840	transmembrane signaling receptor activity
PJDR2_RS24000	COG2766	serine protein kinase
PJDR2_RS24010	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PJDR2_RS24015	COG2002	toxin-antitoxin pair type II binding
PJDR2_RS24020	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
PJDR2_RS24025	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS24045	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
PJDR2_RS24050	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PJDR2_RS24055	COG3850	Histidine kinase
PJDR2_RS24055	COG5002	protein histidine kinase activity
PJDR2_RS24060	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS24065	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PJDR2_RS24075	COG2197	response regulator
PJDR2_RS24080	COG4585	Histidine kinase
PJDR2_RS24085	COG4758	membrane
PJDR2_RS24090	COG0004	ammonium transporteR
PJDR2_RS24100	COG3584	3D domain protein
PJDR2_RS24105	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PJDR2_RS24120	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
PJDR2_RS24125	COG0626	cystathionine gamma-synthase activity
PJDR2_RS24130	COG0626	cystathionine gamma-synthase activity
PJDR2_RS24135	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
PJDR2_RS24140	COG0598	Magnesium transport protein CorA
PJDR2_RS24150	COG2270	Major facilitator Superfamily
PJDR2_RS24170	COG2259	Doxx family
PJDR2_RS24175	COG1733	regulation of RNA biosynthetic process
PJDR2_RS24180	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
PJDR2_RS24185	COG1053	succinate dehydrogenase
PJDR2_RS24190	COG2009	succinate dehydrogenase
PJDR2_RS24195	COG0583	DNA-binding transcription factor activity
PJDR2_RS24200	COG0569	domain protein
PJDR2_RS24205	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
PJDR2_RS24225	COG0322	excinuclease ABC activity
PJDR2_RS24230	COG5583	Uncharacterized small protein (DUF2292)
PJDR2_RS24235	COG4208	sulfate ABC transporter
PJDR2_RS24245	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
PJDR2_RS24250	COG4608	Belongs to the ABC transporter superfamily
PJDR2_RS24255	COG0444	Belongs to the ABC transporter superfamily
PJDR2_RS24260	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PJDR2_RS24265	COG0601	transmembrane transport
PJDR2_RS24275	COG1484	DNA-dependent DNA replication
PJDR2_RS24290	COG3253	May function as heme-dependent peroxidase
PJDR2_RS24300	COG1252	NADH dehydrogenase
PJDR2_RS24320	COG0189	ligase activity
PJDR2_RS24330	COG1408	metallophosphoesterase
PJDR2_RS24340	COG0577	efflux transmembrane transporter activity
PJDR2_RS24345	COG1136	(ABC) transporter
PJDR2_RS24350	COG5002	protein histidine kinase activity
PJDR2_RS24355	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS24365	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
PJDR2_RS24370	COG0573	inorganic phosphate transmembrane transporter activity
PJDR2_RS24375	COG0581	inorganic phosphate transmembrane transporter activity
PJDR2_RS24380	COG0316	Belongs to the HesB IscA family
PJDR2_RS24385	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
PJDR2_RS24390	COG1252	NADH dehydrogenase
PJDR2_RS24400	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
PJDR2_RS24405	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS24415	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
PJDR2_RS24420	COG1612	heme a metabolic process
PJDR2_RS24435	COG2244	polysaccharide biosynthetic process
PJDR2_RS24445	COG2839	Protein conserved in bacteria
PJDR2_RS24450	COG0561	phosphatase activity
PJDR2_RS24455	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PJDR2_RS24460	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PJDR2_RS24460	COG1321	iron dependent repressor
PJDR2_RS24465	COG1121	(ABC) transporter
PJDR2_RS24470	COG0803	Belongs to the bacterial solute-binding protein 9 family
PJDR2_RS24475	COG0768	penicillin binding
PJDR2_RS24510	COG0109	protoheme IX farnesyltransferase activity
PJDR2_RS24525	COG1988	membrane-bound metal-dependent
PJDR2_RS24540	COG0180	Tryptophanyl-tRNA synthetase
PJDR2_RS24545	COG0701	Predicted permease
PJDR2_RS24560	COG0840	transmembrane signaling receptor activity
PJDR2_RS24570	COG1388	LysM domain
PJDR2_RS24570	COG3584	3D domain protein
PJDR2_RS24575	COG2340	Cysteine-rich secretory protein family
PJDR2_RS24610	COG0446	pyridine nucleotide-disulphide oxidoreductase
PJDR2_RS24640	COG1309	transcriptional regulator
PJDR2_RS24645	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PJDR2_RS24655	COG0456	acetyltransferase
PJDR2_RS24680	COG1051	belongs to the nudix hydrolase family
PJDR2_RS24685	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PJDR2_RS24755	COG2508	Transcriptional regulator
PJDR2_RS24770	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS24780	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PJDR2_RS24790	COG0456	acetyltransferase
PJDR2_RS24800	COG2267	carboxylic ester hydrolase activity
PJDR2_RS24810	COG3173	Aminoglycoside phosphotransferase
PJDR2_RS24860	COG2207	Transcriptional regulator
PJDR2_RS24875	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS24885	COG5632	N-Acetylmuramoyl-L-alanine amidase
PJDR2_RS24885	COG3409	Peptidoglycan-binding domain 1 protein
PJDR2_RS24895	COG2197	response regulator
PJDR2_RS24900	COG4585	Histidine kinase
PJDR2_RS24900	COG2203	Gaf domain
PJDR2_RS24905	COG3541	Predicted nucleotidyltransferase
PJDR2_RS24930	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
PJDR2_RS24940	COG0179	Fumarylacetoacetate (FAA) hydrolase
PJDR2_RS24945	COG0726	polysaccharide deacetylase
PJDR2_RS24945	COG1649	PFAM Uncharacterised BCR, COG1649
PJDR2_RS24965	COG5002	protein histidine kinase activity
PJDR2_RS24970	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS25000	COG3091	SprT-like family
PJDR2_RS25010	COG0778	Nitroreductase
PJDR2_RS25020	COG2183	response to ionizing radiation
PJDR2_RS25025	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PJDR2_RS25035	COG0586	Pfam SNARE associated Golgi protein
PJDR2_RS25065	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
PJDR2_RS25075	COG3285	dna ligase
PJDR2_RS25075	COG1793	dna ligase
PJDR2_RS25080	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PJDR2_RS25085	COG1091	dTDP-4-dehydrorhamnose reductase activity
PJDR2_RS25100	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
PJDR2_RS25105	COG1131	(ABC) transporter
PJDR2_RS25110	COG1316	TRANSCRIPTIONal
PJDR2_RS25120	COG0489	protein tyrosine kinase activity
PJDR2_RS25130	COG1396	sequence-specific DNA binding
PJDR2_RS25140	COG0067	glutamate synthase
PJDR2_RS25140	COG0069	glutamate synthase activity
PJDR2_RS25140	COG0070	glutamate synthase
PJDR2_RS25155	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PJDR2_RS25170	COG0726	polysaccharide deacetylase
PJDR2_RS25170	COG1649	PFAM Uncharacterised BCR, COG1649
PJDR2_RS25180	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PJDR2_RS25185	COG0488	(ABC) transporter
PJDR2_RS25190	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS25195	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
PJDR2_RS25200	COG1413	lyase activity
PJDR2_RS25210	COG1368	sulfuric ester hydrolase activity
PJDR2_RS25215	COG3250	beta-galactosidase activity
PJDR2_RS25225	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS25230	COG1175	transmembrane transport
PJDR2_RS25245	COG0583	DNA-binding transcription factor activity
PJDR2_RS25250	COG2329	Antibiotic biosynthesis monooxygenase
PJDR2_RS25255	COG1846	Transcriptional regulator
PJDR2_RS25260	COG2153	protein acetylation
PJDR2_RS25270	COG3408	Glycogen debranching enzyme
PJDR2_RS25270	COG3119	arylsulfatase activity
PJDR2_RS25290	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS25290	COG2207	Transcriptional regulator
PJDR2_RS25310	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS25315	COG1175	transmembrane transport
PJDR2_RS25355	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS25360	COG4209	transmembrane transport
PJDR2_RS25370	COG3275	phosphorelay sensor kinase activity
PJDR2_RS25390	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS25390	COG2207	Transcriptional regulator
PJDR2_RS25395	COG4977	sequence-specific DNA binding
PJDR2_RS25395	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS25410	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS25420	COG0457	Tetratricopeptide repeat
PJDR2_RS25445	COG2972	Histidine kinase
PJDR2_RS25455	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS25460	COG4209	transmembrane transport
PJDR2_RS25475	COG2972	Histidine kinase
PJDR2_RS25485	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PJDR2_RS25495	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS25500	COG4209	transmembrane transport
PJDR2_RS25510	COG0583	DNA-binding transcription factor activity
PJDR2_RS25525	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
PJDR2_RS25535	COG1175	transmembrane transport
PJDR2_RS25540	COG1653	transport
PJDR2_RS25545	COG2972	Histidine kinase
PJDR2_RS25550	COG2207	Transcriptional regulator
PJDR2_RS25555	COG2249	NAD(P)H dehydrogenase (quinone) activity
PJDR2_RS25560	COG1959	2 iron, 2 sulfur cluster binding
PJDR2_RS25600	COG2207	Transcriptional regulator
PJDR2_RS25600	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS25605	COG1846	Transcriptional regulator
PJDR2_RS25620	COG1116	anion transmembrane transporter activity
PJDR2_RS25625	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS25640	COG1175	transmembrane transport
PJDR2_RS25645	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS25655	COG2207	Transcriptional regulator
PJDR2_RS25655	COG4753	response regulator
PJDR2_RS25660	COG2972	Histidine kinase
PJDR2_RS25665	COG0626	cystathionine gamma-synthase activity
PJDR2_RS25670	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
PJDR2_RS25675	COG2226	methyltransferase
PJDR2_RS25680	COG0584	glycerophosphoryl diester phosphodiesterase
PJDR2_RS25685	COG1472	Belongs to the glycosyl hydrolase 3 family
PJDR2_RS25690	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
PJDR2_RS25700	COG2911	Protein conserved in bacteria
PJDR2_RS25700	COG1361	Conserved repeat domain
PJDR2_RS25700	COG3266	domain, Protein
PJDR2_RS25710	COG2814	Major facilitator Superfamily
PJDR2_RS25730	COG1522	sequence-specific DNA binding
PJDR2_RS25740	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS25745	COG1349	DNA-binding transcription factor activity
PJDR2_RS25770	COG1063	alcohol dehydrogenase
PJDR2_RS25775	COG0662	Cupin 2, conserved barrel domain protein
PJDR2_RS25775	COG2207	Transcriptional regulator
PJDR2_RS25790	COG1132	(ABC) transporter
PJDR2_RS25795	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS25800	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS25805	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS25810	COG4977	sequence-specific DNA binding
PJDR2_RS25815	COG3250	beta-galactosidase activity
PJDR2_RS25820	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS25825	COG2378	regulation of single-species biofilm formation
PJDR2_RS25840	COG0800	Aldolase
PJDR2_RS25860	COG0736	holo-[acyl-carrier-protein] synthase activity
PJDR2_RS25880	COG5002	protein histidine kinase activity
PJDR2_RS25885	COG2267	carboxylic ester hydrolase activity
PJDR2_RS25890	COG2081	HI0933 family
PJDR2_RS25905	COG0805	protein transport
PJDR2_RS25925	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PJDR2_RS25930	COG1070	Carbohydrate kinase
PJDR2_RS25985	COG3299	homolog of phage Mu protein gp47
PJDR2_RS25990	COG3628	GPW Gp25 family protein
PJDR2_RS26005	COG2823	Periplasmic or secreted lipoprotein
PJDR2_RS26005	COG1652	LysM domain
PJDR2_RS26060	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
PJDR2_RS26060	COG4447	cellulose binding
PJDR2_RS26065	COG2223	nitrite transmembrane transporter activity
PJDR2_RS26070	COG2706	6-phosphogluconolactonase activity
PJDR2_RS26090	COG2423	ornithine cyclodeaminase activity
PJDR2_RS26095	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
PJDR2_RS26110	COG1136	(ABC) transporter
PJDR2_RS26120	COG0604	alcohol dehydrogenase
PJDR2_RS26125	COG4122	O-methyltransferase activity
PJDR2_RS26130	COG0583	DNA-binding transcription factor activity
PJDR2_RS26135	COG3103	Sh3 type 3 domain protein
PJDR2_RS26135	COG0366	Alpha amylase catalytic
PJDR2_RS26145	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS26145	COG2207	Transcriptional regulator
PJDR2_RS26155	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS26160	COG3534	alpha-L-arabinofuranosidase
PJDR2_RS26170	COG2207	Transcriptional regulator
PJDR2_RS26170	COG4753	response regulator
PJDR2_RS26180	COG5285	phytanoyl-CoA dioxygenase
PJDR2_RS26185	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PJDR2_RS26190	COG1609	Transcriptional regulator
PJDR2_RS26195	COG4209	transmembrane transport
PJDR2_RS26200	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS26210	COG1621	beta-fructofuranosidase activity
PJDR2_RS26215	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PJDR2_RS26225	COG4172	Belongs to the ABC transporter superfamily
PJDR2_RS26230	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PJDR2_RS26245	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PJDR2_RS26255	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PJDR2_RS26265	COG1473	amidohydrolase
PJDR2_RS26270	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PJDR2_RS26275	COG1126	abc transporter atp-binding protein
PJDR2_RS26280	COG0765	amino acid transport
PJDR2_RS26285	COG0765	amino acid transport
PJDR2_RS26290	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
PJDR2_RS26295	COG0456	acetyltransferase
PJDR2_RS26300	COG0583	DNA-binding transcription factor activity
PJDR2_RS26320	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS26330	COG4753	response regulator
PJDR2_RS26330	COG2207	Transcriptional regulator
PJDR2_RS26335	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS26335	COG2972	Histidine kinase
PJDR2_RS26360	COG0105	UTP biosynthetic process
PJDR2_RS26365	COG4585	Histidine kinase
PJDR2_RS26370	COG2197	response regulator
PJDR2_RS26380	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
PJDR2_RS26385	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PJDR2_RS26390	COG1882	Formate acetyltransferase
PJDR2_RS26420	COG1653	transport
PJDR2_RS26425	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS26430	COG4209	transmembrane transport
PJDR2_RS26445	COG2409	Drug exporters of the RND superfamily
PJDR2_RS26475	COG4753	response regulator
PJDR2_RS26475	COG2207	Transcriptional regulator
PJDR2_RS26480	COG3275	phosphorelay sensor kinase activity
PJDR2_RS26500	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS26515	COG1501	Belongs to the glycosyl hydrolase 31 family
PJDR2_RS26520	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS26525	COG5297	Belongs to the glycosyl hydrolase family 6
PJDR2_RS26525	COG4733	cellulase activity
PJDR2_RS26530	COG1609	Transcriptional regulator
PJDR2_RS26535	COG2259	Doxx family
PJDR2_RS26555	COG1295	ribonuclease BN
PJDR2_RS26565	COG2326	polyphosphate kinase activity
PJDR2_RS26590	COG0494	nUDIX hydrolase
PJDR2_RS26600	COG3773	Cell wall hydrolase
PJDR2_RS26605	COG1668	transmembrane transport
PJDR2_RS26610	COG4152	abc transporter atp-binding protein
PJDR2_RS26635	COG3336	cytochrome c oxidase
PJDR2_RS26640	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
PJDR2_RS26655	COG2010	Cytochrome c
PJDR2_RS26655	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
PJDR2_RS26670	COG0667	Aldo Keto reductase
PJDR2_RS26675	COG1733	regulation of RNA biosynthetic process
PJDR2_RS26695	COG0697	spore germination
PJDR2_RS26700	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS26705	COG4209	transmembrane transport
PJDR2_RS26715	COG2204	response regulator
PJDR2_RS26720	COG2972	Histidine kinase
PJDR2_RS26725	COG4753	response regulator
PJDR2_RS26725	COG2207	Transcriptional regulator
PJDR2_RS26740	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PJDR2_RS26740	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PJDR2_RS26760	COG0584	glycerophosphoryl diester phosphodiesterase
PJDR2_RS26765	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PJDR2_RS26775	COG1172	Belongs to the binding-protein-dependent transport system permease family
PJDR2_RS26790	COG2972	Histidine kinase
PJDR2_RS26795	COG2207	Transcriptional regulator
PJDR2_RS26795	COG4753	response regulator
PJDR2_RS26810	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PJDR2_RS26820	COG1012	belongs to the aldehyde dehydrogenase family
PJDR2_RS26825	COG0506	proline dehydrogenase activity
PJDR2_RS26830	COG0006	proline dipeptidase activity
PJDR2_RS26835	COG2309	aminopeptidase activity
PJDR2_RS26845	COG2318	DinB family
PJDR2_RS26850	COG1842	Phage shock protein A
PJDR2_RS26875	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS26880	COG4209	transmembrane transport
PJDR2_RS26895	COG0018	arginyl-trna synthetase
PJDR2_RS26920	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PJDR2_RS26925	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS26930	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
PJDR2_RS26935	COG2169	Transcriptional regulator
PJDR2_RS26940	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PJDR2_RS26950	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PJDR2_RS26955	COG0640	Transcriptional regulator
PJDR2_RS26960	COG3832	glyoxalase III activity
PJDR2_RS26975	COG1595	DNA-templated transcription, initiation
PJDR2_RS26985	COG1801	Protein of unknown function DUF72
PJDR2_RS26995	COG0436	Aminotransferase
PJDR2_RS27005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PJDR2_RS27030	COG1876	peptidase activity
PJDR2_RS27045	COG1011	Hydrolase
PJDR2_RS27060	COG1733	regulation of RNA biosynthetic process
PJDR2_RS27065	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS27080	COG0189	ligase activity
PJDR2_RS27085	COG0189	ligase activity
PJDR2_RS27105	COG1509	lysine 2,3-aminomutase activity
PJDR2_RS27115	COG0351	phosphomethylpyrimidine kinase
PJDR2_RS27120	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PJDR2_RS27125	COG2022	thiamine diphosphate biosynthetic process
PJDR2_RS27135	COG0352	thiamine-phosphate diphosphorylase activity
PJDR2_RS27140	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
PJDR2_RS27145	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PJDR2_RS27150	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS27155	COG1116	anion transmembrane transporter activity
PJDR2_RS27160	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PJDR2_RS27170	COG1131	(ABC) transporter
PJDR2_RS27180	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
PJDR2_RS27190	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS27195	COG1175	transmembrane transport
PJDR2_RS27200	COG1653	transport
PJDR2_RS27205	COG1609	Transcriptional regulator
PJDR2_RS27225	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PJDR2_RS27240	COG1012	belongs to the aldehyde dehydrogenase family
PJDR2_RS27255	COG0753	catalase activity
PJDR2_RS27265	COG0346	lactoylglutathione lyase activity
PJDR2_RS27270	COG0783	Belongs to the Dps family
PJDR2_RS27280	COG2814	Major facilitator Superfamily
PJDR2_RS27295	COG1335	isochorismatase
PJDR2_RS27300	COG2267	carboxylic ester hydrolase activity
PJDR2_RS27305	COG4753	response regulator
PJDR2_RS27305	COG2207	Transcriptional regulator
PJDR2_RS27310	COG2972	Histidine kinase
PJDR2_RS27320	COG0583	DNA-binding transcription factor activity
PJDR2_RS27325	COG0583	DNA-binding transcription factor activity
PJDR2_RS27330	COG0534	Mate efflux family protein
PJDR2_RS27335	COG2207	Transcriptional regulator
PJDR2_RS27335	COG1917	Cupin 2, conserved barrel domain protein
PJDR2_RS27360	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PJDR2_RS27370	COG3250	beta-galactosidase activity
PJDR2_RS27395	COG1609	Transcriptional regulator
PJDR2_RS27405	COG1136	(ABC) transporter
PJDR2_RS27410	COG0577	efflux transmembrane transporter activity
PJDR2_RS27430	COG1053	succinate dehydrogenase
PJDR2_RS27455	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS27460	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS27465	COG2814	Major facilitator Superfamily
PJDR2_RS27480	COG0640	Transcriptional regulator
PJDR2_RS27515	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PJDR2_RS27535	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PJDR2_RS27535	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PJDR2_RS27540	COG2197	response regulator
PJDR2_RS27545	COG4585	Histidine kinase
PJDR2_RS27560	COG0463	Glycosyl transferase, family 2
PJDR2_RS27565	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
PJDR2_RS27570	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PJDR2_RS27635	COG0589	response to stress
PJDR2_RS27650	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS27655	COG4209	transmembrane transport
PJDR2_RS27665	COG1609	Transcriptional regulator
PJDR2_RS27675	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PJDR2_RS27680	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PJDR2_RS27690	COG0494	nUDIX hydrolase
PJDR2_RS27710	COG0697	spore germination
PJDR2_RS27730	COG0346	lactoylglutathione lyase activity
PJDR2_RS27740	COG4941	Belongs to the sigma-70 factor family
PJDR2_RS27755	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PJDR2_RS27770	COG4753	response regulator
PJDR2_RS27770	COG2207	Transcriptional regulator
PJDR2_RS27775	COG2972	Histidine kinase
PJDR2_RS27780	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS27785	COG1175	transmembrane transport
PJDR2_RS27815	COG4533	DNA binding
PJDR2_RS27825	COG0671	phosphoesterase, PA-phosphatase related
PJDR2_RS27830	COG3401	FG-GAP repeat protein
PJDR2_RS27840	COG0640	Transcriptional regulator
PJDR2_RS27855	COG1764	response to oxidative stress
PJDR2_RS27895	COG3655	Transcriptional regulator
PJDR2_RS27905	COG1012	belongs to the aldehyde dehydrogenase family
PJDR2_RS27930	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS27935	COG3623	hexulose-6-phosphate isomerase
PJDR2_RS27945	COG1609	Transcriptional regulator
PJDR2_RS27955	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS27960	COG1175	transmembrane transport
PJDR2_RS27965	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS27990	COG0383	alpha-mannosidase activity
PJDR2_RS28005	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS28015	COG1653	transport
PJDR2_RS28020	COG2207	Transcriptional regulator
PJDR2_RS28020	COG4753	response regulator
PJDR2_RS28020	COG4753	response regulator
PJDR2_RS28020	COG2207	Transcriptional regulator
PJDR2_RS28025	COG2972	Histidine kinase
PJDR2_RS28045	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS28055	COG1653	transport
PJDR2_RS28060	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS28065	COG4209	transmembrane transport
PJDR2_RS28070	COG3290	protein histidine kinase activity
PJDR2_RS28090	COG3833	ABC-type maltose transport systems, permease component
PJDR2_RS28105	COG1346	cytolysis
PJDR2_RS28110	COG1380	Effector of murein hydrolase LrgA
PJDR2_RS28125	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS28150	COG1181	Belongs to the D-alanine--D-alanine ligase family
PJDR2_RS28155	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PJDR2_RS28170	COG0662	Cupin 2, conserved barrel domain protein
PJDR2_RS28170	COG2207	Transcriptional regulator
PJDR2_RS28180	COG3250	beta-galactosidase activity
PJDR2_RS28190	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS28195	COG4209	transmembrane transport
PJDR2_RS28200	COG1653	transport
PJDR2_RS28205	COG4753	response regulator
PJDR2_RS28205	COG2207	Transcriptional regulator
PJDR2_RS28210	COG2972	Histidine kinase
PJDR2_RS28215	COG0662	Cupin 2, conserved barrel domain protein
PJDR2_RS28215	COG2207	Transcriptional regulator
PJDR2_RS28235	COG0789	Transcriptional regulator
PJDR2_RS28240	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS28250	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PJDR2_RS28260	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PJDR2_RS28265	COG5662	AntiSigma factor
PJDR2_RS28270	COG1595	DNA-templated transcription, initiation
PJDR2_RS28280	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PJDR2_RS28285	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PJDR2_RS28310	COG1120	ATPase activity
PJDR2_RS28315	COG0778	Nitroreductase
PJDR2_RS28385	COG0726	polysaccharide deacetylase
PJDR2_RS28400	COG0489	protein tyrosine kinase activity
PJDR2_RS28405	COG0860	N-Acetylmuramoyl-L-alanine amidase
PJDR2_RS28410	COG2046	Belongs to the sulfate adenylyltransferase family
PJDR2_RS28415	COG0175	sulfate reduction
PJDR2_RS28420	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
PJDR2_RS28425	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PJDR2_RS28430	COG0101	tRNA pseudouridine synthase activity
PJDR2_RS28435	COG0203	ribosomal protein L17
PJDR2_RS28440	COG0202	RNA polymerase activity
PJDR2_RS28445	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PJDR2_RS28450	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PJDR2_RS28455	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PJDR2_RS28465	COG0024	Methionine aminopeptidase
PJDR2_RS28470	COG0563	adenylate kinase activity
PJDR2_RS28475	COG0201	protein transport
PJDR2_RS28480	COG0200	Binds to the 23S rRNA
PJDR2_RS28485	COG1841	ribosomal large subunit assembly
PJDR2_RS28490	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PJDR2_RS28495	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PJDR2_RS28500	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PJDR2_RS28505	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PJDR2_RS28510	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PJDR2_RS28515	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PJDR2_RS28520	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PJDR2_RS28525	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PJDR2_RS28530	COG0255	Belongs to the universal ribosomal protein uL29 family
PJDR2_RS28535	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PJDR2_RS28540	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PJDR2_RS28545	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PJDR2_RS28550	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PJDR2_RS28555	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PJDR2_RS28560	COG0089	rRNA binding
PJDR2_RS28565	COG0088	Forms part of the polypeptide exit tunnel
PJDR2_RS28570	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PJDR2_RS28580	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PJDR2_RS28585	COG4120	Belongs to the binding-protein-dependent transport system permease family
PJDR2_RS28595	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PJDR2_RS28600	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PJDR2_RS28605	COG0049	tRNA binding
PJDR2_RS28610	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PJDR2_RS28615	COG1358	cellular component organization or biogenesis
PJDR2_RS28620	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PJDR2_RS28625	COG0085	RNA polymerase activity
PJDR2_RS28630	COG2813	Specifically methylates the guanine in position
PJDR2_RS28635	COG0222	ribosome binding
PJDR2_RS28640	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PJDR2_RS28645	COG0081	regulation of translation
PJDR2_RS28655	COG0250	Participates in transcription elongation, termination and antitermination
PJDR2_RS28660	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
PJDR2_RS28670	COG3688	RNA-binding protein containing a PIN domain
PJDR2_RS28675	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PJDR2_RS28680	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PJDR2_RS28685	COG0215	cysteine-tRNA ligase activity
PJDR2_RS28690	COG1045	serine acetyltransferase
PJDR2_RS28700	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
PJDR2_RS28705	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
PJDR2_RS28710	COG4956	integral membrane protein (PIN domain superfamily)
PJDR2_RS28720	COG1183	phosphatidylcholine synthase activity
PJDR2_RS28725	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
PJDR2_RS28730	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PJDR2_RS28740	COG0542	response to heat
PJDR2_RS28745	COG3869	Catalyzes the specific phosphorylation of arginine residues in
PJDR2_RS28750	COG3880	PFAM UvrB UvrC protein
PJDR2_RS28780	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PJDR2_RS28785	COG0210	DNA helicase
PJDR2_RS28790	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
PJDR2_RS28795	COG0826	peptidase U32
PJDR2_RS28805	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PJDR2_RS28815	COG0640	Transcriptional regulator
PJDR2_RS28825	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PJDR2_RS28830	COG0556	nucleotide-excision repair
PJDR2_RS28835	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PJDR2_RS28840	COG3409	Peptidoglycan-binding domain 1 protein
PJDR2_RS28840	COG0793	Belongs to the peptidase S41A family
PJDR2_RS28845	COG0739	heme binding
PJDR2_RS28850	COG2177	Part of the ABC transporter FtsEX involved in
PJDR2_RS28855	COG2884	Cell division ATP-binding protein ftsE
PJDR2_RS28860	COG2720	vancomycin resistance protein
PJDR2_RS28870	COG0165	Argininosuccinate lyase
PJDR2_RS28875	COG0137	argininosuccinate synthase activity
PJDR2_RS28880	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PJDR2_RS28890	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
PJDR2_RS28895	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PJDR2_RS28900	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PJDR2_RS28905	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PJDR2_RS28910	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PJDR2_RS28915	COG0653	protein targeting
PJDR2_RS28920	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PJDR2_RS28925	COG1278	Cold shock
PJDR2_RS28940	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
PJDR2_RS28950	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
PJDR2_RS28975	COG0463	Glycosyl transferase, family 2
PJDR2_RS28985	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
PJDR2_RS28990	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
PJDR2_RS29000	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PJDR2_RS29005	COG4786	Flagellar basal body rod
PJDR2_RS29005	COG1256	bacterial-type flagellum assembly
PJDR2_RS29025	COG1040	competence protein
PJDR2_RS29030	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PJDR2_RS29065	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PJDR2_RS29085	COG2911	Protein conserved in bacteria
PJDR2_RS29085	COG3266	domain, Protein
PJDR2_RS29085	COG1361	Conserved repeat domain
PJDR2_RS29095	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PJDR2_RS29115	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PJDR2_RS29120	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
PJDR2_RS29125	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PJDR2_RS29135	COG4786	Flagellar basal body rod
PJDR2_RS29140	COG4786	Flagellar basal body rod
PJDR2_RS29145	COG1077	Cell shape determining protein MreB Mrl
PJDR2_RS29150	COG1609	Transcriptional regulator
PJDR2_RS29160	COG2385	sporulation resulting in formation of a cellular spore
PJDR2_RS29165	COG1136	(ABC) transporter
PJDR2_RS29165	COG0577	efflux transmembrane transporter activity
PJDR2_RS29170	COG1136	(ABC) transporter
PJDR2_RS29180	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PJDR2_RS29190	COG1404	Belongs to the peptidase S8 family
PJDR2_RS29195	COG1007	ATP synthesis coupled electron transport
PJDR2_RS29200	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PJDR2_RS29205	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
PJDR2_RS29210	COG0713	ATP synthesis coupled electron transport
PJDR2_RS29225	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
PJDR2_RS29230	COG0649	NAD binding
PJDR2_RS29235	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PJDR2_RS29250	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PJDR2_RS29255	COG0840	transmembrane signaling receptor activity
PJDR2_RS29270	COG4464	protein tyrosine phosphatase activity
PJDR2_RS29275	COG0355	proton-transporting ATP synthase activity, rotational mechanism
PJDR2_RS29280	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PJDR2_RS29285	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PJDR2_RS29290	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PJDR2_RS29295	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PJDR2_RS29300	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PJDR2_RS29310	COG0356	it plays a direct role in the translocation of protons across the membrane
PJDR2_RS29325	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
PJDR2_RS29330	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PJDR2_RS29335	COG4608	Belongs to the ABC transporter superfamily
PJDR2_RS29340	COG0444	Belongs to the ABC transporter superfamily
PJDR2_RS29345	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PJDR2_RS29350	COG0601	transmembrane transport
PJDR2_RS29355	COG4166	transmembrane transport
PJDR2_RS29360	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PJDR2_RS29365	COG4475	Protein of unknown function (DUF436)
PJDR2_RS29370	COG0698	ribose 5-phosphate isomerase
PJDR2_RS29380	COG1971	Probably functions as a manganese efflux pump
PJDR2_RS29385	COG0009	L-threonylcarbamoyladenylate synthase
PJDR2_RS29395	COG2890	protein-(glutamine-N5) methyltransferase activity
PJDR2_RS29400	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PJDR2_RS29415	COG0012	GTP binding
PJDR2_RS29435	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS29440	COG4209	transmembrane transport
PJDR2_RS29445	COG1653	transport
PJDR2_RS29450	COG2207	Transcriptional regulator
PJDR2_RS29450	COG0662	Cupin 2, conserved barrel domain protein
PJDR2_RS29455	COG0673	inositol 2-dehydrogenase activity
PJDR2_RS29470	COG3118	belongs to the thioredoxin family
PJDR2_RS29490	COG2076	Multidrug Resistance protein
PJDR2_RS29495	COG2076	Multidrug Resistance protein
PJDR2_RS29500	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PJDR2_RS29510	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PJDR2_RS29515	COG1247	-acetyltransferase
PJDR2_RS29520	COG1714	RDD family
PJDR2_RS29530	COG0733	neurotransmitter:sodium symporter activity
PJDR2_RS29545	COG0438	transferase activity, transferring glycosyl groups
PJDR2_RS29560	COG0463	Glycosyl transferase, family 2
PJDR2_RS29560	COG0457	Tetratricopeptide repeat
PJDR2_RS29565	COG0463	Glycosyl transferase, family 2
PJDR2_RS29565	COG0457	Tetratricopeptide repeat
PJDR2_RS29600	COG0386	Belongs to the glutathione peroxidase family
PJDR2_RS29605	COG4846	Membrane protein involved in cytochrome C biogenesis
PJDR2_RS29610	COG0667	Aldo Keto reductase
PJDR2_RS29615	COG0753	catalase activity
PJDR2_RS29620	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS29625	COG0735	belongs to the Fur family
PJDR2_RS29630	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PJDR2_RS29645	COG1876	peptidase activity
PJDR2_RS29650	COG1368	sulfuric ester hydrolase activity
PJDR2_RS29655	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS29665	COG0667	Aldo Keto reductase
PJDR2_RS29670	COG0346	lactoylglutathione lyase activity
PJDR2_RS29675	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PJDR2_RS29680	COG0252	asparaginase activity
PJDR2_RS29685	COG0179	Fumarylacetoacetate (FAA) hydrolase
PJDR2_RS29690	COG0154	amidase activity
PJDR2_RS29695	COG0405	Gamma-glutamyltransferase
PJDR2_RS29700	COG1522	sequence-specific DNA binding
PJDR2_RS29705	COG2059	Chromate
PJDR2_RS29710	COG2059	Chromate
PJDR2_RS29715	COG1033	growth of symbiont in host cell
PJDR2_RS29715	COG2409	Drug exporters of the RND superfamily
PJDR2_RS29735	COG0840	transmembrane signaling receptor activity
PJDR2_RS29740	COG1132	(ABC) transporter
PJDR2_RS29745	COG1132	(ABC) transporter
PJDR2_RS29755	COG2116	formate transmembrane transporter activity
PJDR2_RS29760	COG2146	nitrite reductase [NAD(P)H] activity
PJDR2_RS29765	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PJDR2_RS29770	COG3707	response regulator
PJDR2_RS29775	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PJDR2_RS29780	COG2814	Major facilitator Superfamily
PJDR2_RS29795	COG1741	Belongs to the pirin family
PJDR2_RS29810	COG2132	Multicopper oxidase
PJDR2_RS29815	COG0583	DNA-binding transcription factor activity
PJDR2_RS29820	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PJDR2_RS29830	COG0667	Aldo Keto reductase
PJDR2_RS29840	COG2249	NAD(P)H dehydrogenase (quinone) activity
PJDR2_RS29850	COG1942	4-Oxalocrotonate Tautomerase
PJDR2_RS29855	COG0583	DNA-binding transcription factor activity
PJDR2_RS29875	COG0737	Belongs to the 5'-nucleotidase family
PJDR2_RS29880	COG0024	Methionine aminopeptidase
PJDR2_RS29895	COG5002	protein histidine kinase activity
PJDR2_RS29900	COG1136	(ABC) transporter
PJDR2_RS29915	COG1136	(ABC) transporter
PJDR2_RS29925	COG0095	Lipoate-protein ligase
PJDR2_RS29935	COG2357	RelA SpoT domain protein
PJDR2_RS29940	COG0384	phenazine biosynthesis protein PhzF
PJDR2_RS29945	COG3610	response to peptide
PJDR2_RS29950	COG2966	Psort location CytoplasmicMembrane, score
PJDR2_RS29955	COG0534	Mate efflux family protein
PJDR2_RS29960	COG1940	carbohydrate kinase activity
PJDR2_RS29965	COG2207	Transcriptional regulator
PJDR2_RS29970	COG2972	Histidine kinase
PJDR2_RS29980	COG1175	transmembrane transport
PJDR2_RS29990	COG1649	PFAM Uncharacterised BCR, COG1649
PJDR2_RS29990	COG0726	polysaccharide deacetylase
PJDR2_RS29995	COG0702	epimerase
PJDR2_RS30000	COG0386	Belongs to the glutathione peroxidase family
PJDR2_RS30005	COG1846	Transcriptional regulator
PJDR2_RS30015	COG1131	(ABC) transporter
PJDR2_RS30030	COG2195	Cleaves the N-terminal amino acid of tripeptides
PJDR2_RS30035	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PJDR2_RS30040	COG0400	carboxylic ester hydrolase activity
PJDR2_RS30045	COG0346	lactoylglutathione lyase activity
PJDR2_RS30050	COG1846	Transcriptional regulator
PJDR2_RS30095	COG2814	Major facilitator Superfamily
PJDR2_RS30100	COG1012	belongs to the aldehyde dehydrogenase family
PJDR2_RS30110	COG0820	rRNA (adenine-C2-)-methyltransferase activity
PJDR2_RS30125	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PJDR2_RS30140	COG2205	protein histidine kinase activity
PJDR2_RS30150	COG0492	ferredoxin-NADP+ reductase activity
PJDR2_RS30155	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS30160	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS30165	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PJDR2_RS30185	COG1368	sulfuric ester hydrolase activity
PJDR2_RS30195	COG1664	Polymer-forming cytoskeletal
PJDR2_RS30200	COG1664	Polymer-forming cytoskeletal
PJDR2_RS30205	COG0789	Transcriptional regulator
PJDR2_RS30215	COG2814	Major facilitator Superfamily
PJDR2_RS30220	COG0789	Transcriptional regulator
PJDR2_RS30235	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
PJDR2_RS30245	COG3639	organic phosphonate transmembrane transporter activity
PJDR2_RS30250	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PJDR2_RS30270	COG1357	PFAM Pentapeptide repeats (8 copies)
PJDR2_RS30280	COG1309	transcriptional regulator
PJDR2_RS30290	COG0326	Molecular chaperone. Has ATPase activity
PJDR2_RS30305	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS30340	COG0785	Cytochrome C biogenesis protein
PJDR2_RS30355	COG1823	symporter activity
PJDR2_RS30370	COG2814	Major facilitator Superfamily
PJDR2_RS30385	COG3706	GGDEF domain
PJDR2_RS30390	COG2226	methyltransferase
PJDR2_RS30395	COG1309	transcriptional regulator
PJDR2_RS30400	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS30405	COG0583	DNA-binding transcription factor activity
PJDR2_RS30410	COG2814	Major facilitator Superfamily
PJDR2_RS30415	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS30420	COG2205	protein histidine kinase activity
PJDR2_RS30430	COG1136	(ABC) transporter
PJDR2_RS30450	COG1012	belongs to the aldehyde dehydrogenase family
PJDR2_RS30455	COG0443	Heat shock 70 kDa protein
PJDR2_RS30465	COG1511	domain protein
PJDR2_RS30485	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
PJDR2_RS30500	COG1175	transmembrane transport
PJDR2_RS30535	COG0583	DNA-binding transcription factor activity
PJDR2_RS30540	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS30570	COG3384	dioxygenase
PJDR2_RS30585	COG0477	Major facilitator Superfamily
PJDR2_RS30590	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS30625	COG0789	Transcriptional regulator
PJDR2_RS30630	COG0577	efflux transmembrane transporter activity
PJDR2_RS30635	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS30640	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS30670	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS30675	COG5002	protein histidine kinase activity
PJDR2_RS30690	COG4221	oxidoreductase activity
PJDR2_RS30695	COG2207	Transcriptional regulator
PJDR2_RS30700	COG2197	response regulator
PJDR2_RS30705	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS30705	COG2205	protein histidine kinase activity
PJDR2_RS30705	COG4191	Histidine kinase
PJDR2_RS30715	COG1175	transmembrane transport
PJDR2_RS30720	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS30725	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
PJDR2_RS30735	COG1611	Belongs to the LOG family
PJDR2_RS30740	COG1694	Mazg nucleotide pyrophosphohydrolase
PJDR2_RS30750	COG3397	chitin binding
PJDR2_RS30760	COG2814	Major facilitator Superfamily
PJDR2_RS30765	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
PJDR2_RS30805	COG0789	Transcriptional regulator
PJDR2_RS30815	COG2211	Major facilitator Superfamily
PJDR2_RS30825	COG0402	S-adenosylhomocysteine deaminase activity
PJDR2_RS30830	COG0655	NAD(P)H dehydrogenase (quinone) activity
PJDR2_RS30840	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PJDR2_RS30845	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS30850	COG0277	FAD linked oxidase domain protein
PJDR2_RS30865	COG1349	DNA-binding transcription factor activity
PJDR2_RS30875	COG3620	sequence-specific DNA binding
PJDR2_RS30885	COG2746	aminoglycoside 3-N-acetyltransferase activity
PJDR2_RS30900	COG1051	belongs to the nudix hydrolase family
PJDR2_RS30905	COG0494	nUDIX hydrolase
PJDR2_RS30910	COG1056	cytidyltransferase-related domain
PJDR2_RS30910	COG1051	belongs to the nudix hydrolase family
PJDR2_RS30915	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PJDR2_RS30920	COG5002	protein histidine kinase activity
PJDR2_RS30925	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
PJDR2_RS30930	COG5002	protein histidine kinase activity
PJDR2_RS30930	COG0784	Response regulator, receiver
PJDR2_RS30935	COG2308	Evidence 4 Homologs of previously reported genes of
PJDR2_RS30965	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS30970	COG4209	transmembrane transport
PJDR2_RS30985	COG1940	carbohydrate kinase activity
PJDR2_RS30990	COG0579	oxidoreductase
PJDR2_RS31000	COG1733	regulation of RNA biosynthetic process
PJDR2_RS31005	COG2910	NAD(P)H-binding
PJDR2_RS31040	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJDR2_RS31075	COG0861	Integral membrane protein TerC family
PJDR2_RS31080	COG0662	Cupin 2, conserved barrel domain protein
PJDR2_RS31090	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PJDR2_RS31095	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS31100	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PJDR2_RS31105	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PJDR2_RS31110	COG1116	anion transmembrane transporter activity
PJDR2_RS31115	COG1309	transcriptional regulator
PJDR2_RS31125	COG1733	regulation of RNA biosynthetic process
PJDR2_RS31130	COG0778	Nitroreductase
PJDR2_RS31155	COG1733	regulation of RNA biosynthetic process
PJDR2_RS31165	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS31180	COG1595	DNA-templated transcription, initiation
PJDR2_RS31190	COG2207	Transcriptional regulator
PJDR2_RS31190	COG4753	response regulator
PJDR2_RS31195	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS31200	COG1175	transmembrane transport
PJDR2_RS31210	COG3275	phosphorelay sensor kinase activity
PJDR2_RS31215	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PJDR2_RS31225	COG1175	transmembrane transport
PJDR2_RS31230	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS31250	COG2731	YhcH YjgK YiaL family protein
PJDR2_RS31255	COG2197	response regulator
PJDR2_RS31265	COG2814	Major facilitator Superfamily
PJDR2_RS31270	COG2378	regulation of single-species biofilm formation
PJDR2_RS31275	COG1028	Short-chain dehydrogenase reductase Sdr
PJDR2_RS31290	COG0246	Mannitol dehydrogenase
PJDR2_RS31295	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
PJDR2_RS31300	COG3711	transcriptional antiterminator
PJDR2_RS31315	COG0477	Major facilitator Superfamily
PJDR2_RS31340	COG0534	Mate efflux family protein
PJDR2_RS31350	COG0277	FAD linked oxidase domain protein
PJDR2_RS31370	COG4753	response regulator
PJDR2_RS31370	COG2207	Transcriptional regulator
PJDR2_RS31375	COG2972	Histidine kinase
PJDR2_RS31385	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS31400	COG0666	response to abiotic stimulus
PJDR2_RS31405	COG1742	UPF0060 membrane protein
PJDR2_RS31415	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PJDR2_RS31425	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
PJDR2_RS31440	COG5002	protein histidine kinase activity
PJDR2_RS31445	COG0745	RESPONSE REGULATOR receiver
PJDR2_RS31450	COG0741	lytic transglycosylase activity
PJDR2_RS31450	COG0739	heme binding
PJDR2_RS31450	COG1196	nuclear chromosome segregation
PJDR2_RS31460	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PJDR2_RS31465	COG0305	Participates in initiation and elongation during chromosome replication
PJDR2_RS31470	COG0359	binds to the 23S rRNA
PJDR2_RS31475	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
PJDR2_RS31505	COG1253	flavin adenine dinucleotide binding
PJDR2_RS31510	COG0475	glutathione-regulated potassium exporter activity
PJDR2_RS31515	COG1252	NADH dehydrogenase
PJDR2_RS31525	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PJDR2_RS31530	COG0629	single-stranded DNA binding
PJDR2_RS31535	COG0360	Binds together with S18 to 16S ribosomal RNA
PJDR2_RS31555	COG4481	Protein conserved in bacteria
PJDR2_RS31560	COG0668	transmembrane transport
PJDR2_RS31580	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PJDR2_RS31585	COG1475	DNA binding
PJDR2_RS31590	COG1192	Involved in chromosome partitioning
PJDR2_RS31595	COG1475	DNA binding
PJDR2_RS31600	COG0357	Ribosomal RNA small subunit methyltransferase G
PJDR2_RS31605	COG0445	tRNA wobble uridine modification
PJDR2_RS31610	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PJDR2_RS31615	COG1847	R3H domain protein
PJDR2_RS31625	COG0594	ribonuclease P activity
PJDR2_RS31630	COG0230	Belongs to the bacterial ribosomal protein bL34 family
PJDR2_RS31640	COG2205	protein histidine kinase activity
PJDR2_RS31645	COG0653	protein targeting
PJDR2_RS31655	COG0789	Transcriptional regulator
PJDR2_RS31670	COG5002	protein histidine kinase activity
PJDR2_RS31670	COG0784	Response regulator, receiver
PJDR2_RS31670	COG2205	protein histidine kinase activity
PJDR2_RS31705	COG3266	domain, Protein
PJDR2_RS31705	COG1361	Conserved repeat domain
PJDR2_RS31705	COG2911	Protein conserved in bacteria
PJDR2_RS31715	COG0395	ABC-type sugar transport system, permease component
PJDR2_RS31720	COG5386	Cell surface protein
PJDR2_RS31725	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS31730	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS31750	COG1376	ErfK ybiS ycfS ynhG family protein
PJDR2_RS31755	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS31765	COG0598	Magnesium transport protein CorA
PJDR2_RS31770	COG5001	Diguanylate cyclase
PJDR2_RS31770	COG3300	MHYT domain
PJDR2_RS31780	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PJDR2_RS31785	COG4191	Histidine kinase
PJDR2_RS31800	COG0494	nUDIX hydrolase
PJDR2_RS31810	COG0739	heme binding
PJDR2_RS31825	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS31840	COG5386	Cell surface protein
PJDR2_RS31845	COG2207	Transcriptional regulator
PJDR2_RS31850	COG0235	Class ii aldolase
PJDR2_RS31870	COG2972	Histidine kinase
PJDR2_RS31875	COG2972	Histidine kinase
PJDR2_RS31895	COG1555	photosystem II stabilization
PJDR2_RS31895	COG1596	polysaccharide export
PJDR2_RS31920	COG2815	serine threonine protein kinase
PJDR2_RS31920	COG0515	serine threonine protein kinase
PJDR2_RS31930	COG2373	Large extracellular alpha-helical protein
PJDR2_RS31965	COG3480	Lon protease (S16) C-terminal proteolytic domain
PJDR2_RS32035	COG1361	Conserved repeat domain
PJDR2_RS32050	COG1388	LysM domain
PJDR2_RS32135	COG2376	Dihydroxyacetone kinase
PJDR2_RS32150	COG1361	Conserved repeat domain
PJDR2_RS32155	COG4191	Histidine kinase
PJDR2_RS32165	COG2207	Transcriptional regulator
PJDR2_RS32170	COG1388	LysM domain
PJDR2_RS32170	COG0791	NLP P60 protein
PJDR2_RS32180	COG3693	PFAM glycoside hydrolase, family 10
PJDR2_RS32185	COG0497	DNA recombination
PJDR2_RS32195	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
PJDR2_RS32225	COG1309	transcriptional regulator
PJDR2_RS32230	COG4191	Histidine kinase
PJDR2_RS32235	COG1361	Conserved repeat domain
PJDR2_RS32240	COG1802	Transcriptional regulator
PJDR2_RS32250	COG1802	Transcriptional regulator
PJDR2_RS32260	COG0726	polysaccharide deacetylase