AA956_RS00030	SM00155	Phospholipase D. Active site motifs.
AA956_RS00035	SM00965	Secretin and TonB N terminus short domain
AA956_RS00055	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS00100	SM00344	helix_turn_helix ASNC type
AA956_RS00115	SM00919	Malic enzyme, NAD binding domain
AA956_RS00115	SM01274	AA956_RS00115
AA956_RS00135	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS00180	SM00487	DEAD-like helicases superfamily
AA956_RS00180	SM00490	helicase superfamily c-terminal domain
AA956_RS00215	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS00330	SM00822	AA956_RS00330
AA956_RS00470	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AA956_RS00490	SM00749	bacterial OsmY and nodulation domain
AA956_RS00510	SM00382	ATPases associated with a variety of cellular activities
AA956_RS00530	SM00849	Metallo-beta-lactamase superfamily
AA956_RS00560	SM00881	CoA binding domain
AA956_RS00570	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS00580	SM00487	DEAD-like helicases superfamily
AA956_RS00580	SM00490	helicase superfamily c-terminal domain
AA956_RS00680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS00680	SM00387	Histidine kinase-like ATPases
AA956_RS00680	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS00685	SM00448	cheY-homologous receiver domain
AA956_RS00685	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS00705	SM00382	ATPases associated with a variety of cellular activities
AA956_RS00710	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS00715	SM00448	cheY-homologous receiver domain
AA956_RS00715	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS00720	SM00387	Histidine kinase-like ATPases
AA956_RS00720	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS00725	SM00387	Histidine kinase-like ATPases
AA956_RS00730	SM00421	helix_turn_helix, Lux Regulon
AA956_RS00730	SM00448	cheY-homologous receiver domain
AA956_RS00785	SM00382	ATPases associated with a variety of cellular activities
AA956_RS00845	SM00047	Lysozyme subfamily 2
AA956_RS00890	SM00858	AA956_RS00890
AA956_RS00915	SM00382	ATPases associated with a variety of cellular activities
AA956_RS00915	SM00962	SRP54-type protein, GTPase domain
AA956_RS00935	SM00448	cheY-homologous receiver domain
AA956_RS00940	SM00448	cheY-homologous receiver domain
AA956_RS00950	SM00138	Methyltransferase, chemotaxis proteins 
AA956_RS00955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS00955	SM01049	AA956_RS00955
AA956_RS00960	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS00960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS00965	SM00091	PAS domain
AA956_RS00965	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS00965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS00970	SM00260	Two component signalling adaptor domain
AA956_RS00975	SM00073	Histidine Phosphotransfer domain
AA956_RS00975	SM00260	Two component signalling adaptor domain
AA956_RS00975	SM00387	Histidine kinase-like ATPases
AA956_RS00975	SM01231	AA956_RS00975
AA956_RS00980	SM00448	cheY-homologous receiver domain
AA956_RS01020	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01065	SM00470	ParB-like nuclease domain
AA956_RS01085	SM01228	AA956_RS01085
AA956_RS01090	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01095	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01105	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS01140	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01145	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01210	SM00344	helix_turn_helix ASNC type
AA956_RS01235	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01250	SM00344	helix_turn_helix ASNC type
AA956_RS01275	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01295	SM01359	AA956_RS01295
AA956_RS01295	SM01360	AA956_RS01295
AA956_RS01305	SM00344	helix_turn_helix ASNC type
AA956_RS01320	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
AA956_RS01325	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS01350	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS01355	SM00450	Rhodanese Homology Domain
AA956_RS01405	SM01234	AA956_RS01405
AA956_RS01415	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01415	SM00760	Bacterial dnaA protein helix-turn-helix domain
AA956_RS01420	SM00480	DNA polymerase III beta subunit
AA956_RS01425	SM00387	Histidine kinase-like ATPases
AA956_RS01425	SM00433	TopoisomeraseII
AA956_RS01445	SM00487	DEAD-like helicases superfamily
AA956_RS01455	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS01475	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01540	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS01555	SM00829	Enoylreductase
AA956_RS01570	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS01575	SM00903	Flavin reductase like domain
AA956_RS01595	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AA956_RS01600	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01615	SM00903	Flavin reductase like domain
AA956_RS01620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS01620	SM00895	AA956_RS01620
AA956_RS01640	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS01680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS01730	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS01745	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01755	SM00450	Rhodanese Homology Domain
AA956_RS01805	SM00965	Secretin and TonB N terminus short domain
AA956_RS01820	SM00382	ATPases associated with a variety of cellular activities
AA956_RS01960	SM00052	Putative diguanylate phosphodiesterase
AA956_RS01990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS01990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS01995	SM00260	Two component signalling adaptor domain
AA956_RS02000	SM00028	Tetratricopeptide repeats
AA956_RS02000	SM00138	Methyltransferase, chemotaxis proteins 
AA956_RS02005	SM00260	Two component signalling adaptor domain
AA956_RS02010	SM00073	Histidine Phosphotransfer domain
AA956_RS02010	SM00260	Two component signalling adaptor domain
AA956_RS02010	SM00387	Histidine kinase-like ATPases
AA956_RS02010	SM00448	cheY-homologous receiver domain
AA956_RS02015	SM00448	cheY-homologous receiver domain
AA956_RS02020	SM00267	diguanylate cyclase
AA956_RS02020	SM00448	cheY-homologous receiver domain
AA956_RS02065	SM00382	ATPases associated with a variety of cellular activities
AA956_RS02070	SM00382	ATPases associated with a variety of cellular activities
AA956_RS02090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS02090	SM00895	AA956_RS02090
AA956_RS02105	SM01043	Bacterial transcriptional activator domain
AA956_RS02110	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS02125	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AA956_RS02170	SM00421	helix_turn_helix, Lux Regulon
AA956_RS02170	SM00448	cheY-homologous receiver domain
AA956_RS02175	SM00387	Histidine kinase-like ATPases
AA956_RS02175	SM01049	AA956_RS02175
AA956_RS02190	SM00729	Elongator protein 3, MiaB family, Radical SAM
AA956_RS02200	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AA956_RS02200	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AA956_RS02200	SM00493	AA956_RS02200
AA956_RS02245	SM00091	PAS domain
AA956_RS02245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS02245	SM00387	Histidine kinase-like ATPases
AA956_RS02245	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS02250	SM00448	cheY-homologous receiver domain
AA956_RS02280	SM00671	Sel1-like repeats.
AA956_RS02325	SM00845	GatB domain
AA956_RS02425	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AA956_RS02440	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AA956_RS02470	SM00448	cheY-homologous receiver domain
AA956_RS02475	SM00387	Histidine kinase-like ATPases
AA956_RS02535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS02535	SM00895	AA956_RS02535
AA956_RS02570	SM00382	ATPases associated with a variety of cellular activities
AA956_RS02575	SM00382	ATPases associated with a variety of cellular activities
AA956_RS02665	SM00996	S-adenosyl-L-homocysteine hydrolase
AA956_RS02665	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AA956_RS02700	SM00382	ATPases associated with a variety of cellular activities
AA956_RS02705	SM00382	ATPases associated with a variety of cellular activities
AA956_RS02725	SM00988	UreE urease accessory protein, N-terminal domain
AA956_RS02750	SM00382	ATPases associated with a variety of cellular activities
AA956_RS02765	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS02780	SM00382	ATPases associated with a variety of cellular activities
AA956_RS02810	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS02820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS02835	SM00797	Allophanate hydrolase subunit 2
AA956_RS02840	SM00796	Allophanate hydrolase subunit 1
AA956_RS02875	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS02895	SM00905	Dihydroneopterin aldolase
AA956_RS02955	SM00382	ATPases associated with a variety of cellular activities
AA956_RS02970	SM00448	cheY-homologous receiver domain
AA956_RS02970	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS02975	SM00387	Histidine kinase-like ATPases
AA956_RS02975	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS02985	SM01060	AA956_RS02985
AA956_RS03095	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS03130	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS03150	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AA956_RS03240	SM00849	Metallo-beta-lactamase superfamily
AA956_RS03275	SM01322	AA956_RS03275
AA956_RS03290	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS03300	SM00267	diguanylate cyclase
AA956_RS03325	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS03335	SM00878	Biotin carboxylase C-terminal domain
AA956_RS03340	SM00729	Elongator protein 3, MiaB family, Radical SAM
AA956_RS03340	SM00876	Biotin and Thiamin Synthesis associated domain
AA956_RS03390	SM00947	Carbonic anhydrase
AA956_RS03410	SM00422	helix_turn_helix, mercury resistance
AA956_RS03415	SM00849	Metallo-beta-lactamase superfamily
AA956_RS03445	SM00836	DALR anticodon binding domain
AA956_RS03445	SM01016	Arginyl tRNA synthetase N terminal dom
AA956_RS03465	SM01018	B12 binding domain
AA956_RS03475	SM00450	Rhodanese Homology Domain
AA956_RS03495	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS03525	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS03580	SM00382	ATPases associated with a variety of cellular activities
AA956_RS03615	SM00936	Penicillin-binding protein 5, C-terminal domain 
AA956_RS03650	SM00729	Elongator protein 3, MiaB family, Radical SAM
AA956_RS03660	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS03675	SM00382	ATPases associated with a variety of cellular activities
AA956_RS03685	SM00387	Histidine kinase-like ATPases
AA956_RS03685	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS03690	SM00382	ATPases associated with a variety of cellular activities
AA956_RS03690	SM00448	cheY-homologous receiver domain
AA956_RS03710	SM00382	ATPases associated with a variety of cellular activities
AA956_RS03725	SM00938	Nitrogen regulatory protein P-II
AA956_RS03770	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AA956_RS03770	SM00245	tail specific protease
AA956_RS03775	SM00855	Phosphoglycerate mutase family
AA956_RS03780	SM00450	Rhodanese Homology Domain
AA956_RS03800	SM00506	Appr-1"-p processing enzyme
AA956_RS03830	SM00788	Adenylosuccinate synthetase
AA956_RS03855	SM00903	Flavin reductase like domain
AA956_RS03970	SM00382	ATPases associated with a variety of cellular activities
AA956_RS03970	SM00962	SRP54-type protein, GTPase domain
AA956_RS03970	SM00963	SRP54-type protein, helical bundle domain
AA956_RS03990	SM00382	ATPases associated with a variety of cellular activities
AA956_RS04020	SM01400	AA956_RS04020
AA956_RS04040	SM00028	Tetratricopeptide repeats
AA956_RS04045	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AA956_RS04045	SM01232	AA956_RS04045
AA956_RS04050	SM00478	endonuclease III
AA956_RS04085	SM00382	ATPases associated with a variety of cellular activities
AA956_RS04105	SM00116	Domain in cystathionine beta-synthase and other proteins.
AA956_RS04125	SM00420	helix_turn_helix, Deoxyribose operon repressor
AA956_RS04125	SM01134	AA956_RS04125
AA956_RS04130	SM00382	ATPases associated with a variety of cellular activities
AA956_RS04150	SM00382	ATPases associated with a variety of cellular activities
AA956_RS04155	SM00382	ATPases associated with a variety of cellular activities
AA956_RS04180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS04180	SM00866	AA956_RS04180
AA956_RS04190	SM00072	Guanylate kinase homologues.
AA956_RS04230	SM00382	ATPases associated with a variety of cellular activities
AA956_RS04240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS04240	SM00895	AA956_RS04240
AA956_RS04305	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AA956_RS04315	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS04315	SM00895	AA956_RS04315
AA956_RS04335	SM01150	AA956_RS04335
AA956_RS04380	SM01007	Class II Aldolase and Adducin N-terminal domain
AA956_RS04400	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS04410	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
AA956_RS04460	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AA956_RS04470	SM00422	helix_turn_helix, mercury resistance
AA956_RS04485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS04485	SM00895	AA956_RS04485
AA956_RS04490	SM00382	ATPases associated with a variety of cellular activities
AA956_RS04495	SM00822	AA956_RS04495
AA956_RS04525	SM00829	Enoylreductase
AA956_RS04545	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS04565	SM00382	ATPases associated with a variety of cellular activities
AA956_RS04600	SM00382	ATPases associated with a variety of cellular activities
AA956_RS04610	SM00886	Stress responsive A/B Barrel Domain
AA956_RS04705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS04705	SM00895	AA956_RS04705
AA956_RS04755	SM00344	helix_turn_helix ASNC type
AA956_RS04760	SM00917	LeuA allosteric (dimerisation) domain
AA956_RS04770	SM00882	Coenzyme A transferase
AA956_RS04775	SM00882	Coenzyme A transferase
AA956_RS04780	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS04795	SM00849	Metallo-beta-lactamase superfamily
AA956_RS04800	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS04805	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS04820	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS04840	SM01217	AA956_RS04840
AA956_RS04850	SM01329	AA956_RS04850
AA956_RS04865	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS04885	SM00052	Putative diguanylate phosphodiesterase
AA956_RS04905	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS04910	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS04965	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AA956_RS04980	SM00382	ATPases associated with a variety of cellular activities
AA956_RS04985	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS04990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS05000	SM00052	Putative diguanylate phosphodiesterase
AA956_RS05000	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AA956_RS05000	SM00091	PAS domain
AA956_RS05000	SM00267	diguanylate cyclase
AA956_RS05090	SM00450	Rhodanese Homology Domain
AA956_RS05095	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS05195	SM00479	AA956_RS05195
AA956_RS05200	SM00382	ATPases associated with a variety of cellular activities
AA956_RS05225	SM00255	Toll - interleukin 1 - resistance
AA956_RS05265	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS05270	SM01119	AA956_RS05270
AA956_RS05330	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AA956_RS05365	SM00978	AA956_RS05365
AA956_RS05390	SM00834	Putative regulatory protein
AA956_RS05410	SM00155	Phospholipase D. Active site motifs.
AA956_RS05445	SM00382	ATPases associated with a variety of cellular activities
AA956_RS05455	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AA956_RS05460	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS05475	SM00382	ATPases associated with a variety of cellular activities
AA956_RS05510	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AA956_RS05530	SM00363	S4 RNA-binding domain
AA956_RS05545	SM00855	Phosphoglycerate mutase family
AA956_RS05555	SM00382	ATPases associated with a variety of cellular activities
AA956_RS05605	SM00981	AA956_RS05605
AA956_RS05630	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AA956_RS05630	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AA956_RS05650	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS05715	SM00421	helix_turn_helix, Lux Regulon
AA956_RS05715	SM00448	cheY-homologous receiver domain
AA956_RS05730	SM00382	ATPases associated with a variety of cellular activities
AA956_RS05805	SM01323	AA956_RS05805
AA956_RS05820	SM00487	DEAD-like helicases superfamily
AA956_RS05820	SM00490	helicase superfamily c-terminal domain
AA956_RS05830	SM01060	AA956_RS05830
AA956_RS05955	SM00507	HNH nucleases
AA956_RS05980	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS06145	SM00382	ATPases associated with a variety of cellular activities
AA956_RS06160	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AA956_RS06185	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS06195	SM00382	ATPases associated with a variety of cellular activities
AA956_RS06215	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS06250	SM00421	helix_turn_helix, Lux Regulon
AA956_RS06250	SM00448	cheY-homologous receiver domain
AA956_RS06270	SM00560	LamG-like jellyroll fold domain
AA956_RS06300	SM00965	Secretin and TonB N terminus short domain
AA956_RS06315	SM00912	haemagglutination activity domain
AA956_RS06365	SM00382	ATPases associated with a variety of cellular activities
AA956_RS06385	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS06425	SM00382	ATPases associated with a variety of cellular activities
AA956_RS06430	SM00382	ATPases associated with a variety of cellular activities
AA956_RS06470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS06470	SM00387	Histidine kinase-like ATPases
AA956_RS06490	SM00448	cheY-homologous receiver domain
AA956_RS06495	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS06550	SM00998	Adenylosuccinate lyase C-terminus
AA956_RS06565	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS06585	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS06605	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS06650	SM00382	ATPases associated with a variety of cellular activities
AA956_RS06820	SM00382	ATPases associated with a variety of cellular activities
AA956_RS06830	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS06830	SM00387	Histidine kinase-like ATPases
AA956_RS06830	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS06835	SM00448	cheY-homologous receiver domain
AA956_RS06835	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS06870	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS06895	SM00387	Histidine kinase-like ATPases
AA956_RS06915	SM00421	helix_turn_helix, Lux Regulon
AA956_RS06915	SM00448	cheY-homologous receiver domain
AA956_RS06920	SM00448	cheY-homologous receiver domain
AA956_RS06925	SM00382	ATPases associated with a variety of cellular activities
AA956_RS06925	SM00930	AA956_RS06925
AA956_RS06940	SM00052	Putative diguanylate phosphodiesterase
AA956_RS06940	SM00267	diguanylate cyclase
AA956_RS06985	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AA956_RS06995	SM00382	ATPases associated with a variety of cellular activities
AA956_RS07000	SM00382	ATPases associated with a variety of cellular activities
AA956_RS07070	SM00014	Acid phosphatase homologues
AA956_RS07075	SM00831	Cation transporter/ATPase, N-terminus
AA956_RS07085	SM01130	AA956_RS07085
AA956_RS07115	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS07150	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AA956_RS07160	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AA956_RS07170	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS07185	SM00382	ATPases associated with a variety of cellular activities
AA956_RS07195	SM00822	AA956_RS07195
AA956_RS07210	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS07215	SM00822	AA956_RS07215
AA956_RS07275	SM00869	Autotransporter beta-domain
AA956_RS07300	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS07345	SM00220	Serine/Threonine protein kinases, catalytic domain
AA956_RS07370	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS07420	SM00857	Resolvase, N terminal domain
AA956_RS07550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS07550	SM00895	AA956_RS07550
AA956_RS07605	SM00434	DNA Topoisomerase IV
AA956_RS07620	SM00830	Chorismate mutase type II
AA956_RS07645	SM00316	Ribosomal protein S1-like RNA-binding domain
AA956_RS07650	SM00411	bacterial (prokaryotic) histone like domain
AA956_RS07660	SM00028	Tetratricopeptide repeats
AA956_RS07665	SM00984	UDP binding domain
AA956_RS07715	SM00893	Electron transfer flavoprotein domain
AA956_RS07720	SM00893	Electron transfer flavoprotein domain
AA956_RS07750	SM00382	ATPases associated with a variety of cellular activities
AA956_RS07770	SM00855	Phosphoglycerate mutase family
AA956_RS07850	SM00344	helix_turn_helix ASNC type
AA956_RS07895	SM00830	Chorismate mutase type II
AA956_RS07960	SM00382	ATPases associated with a variety of cellular activities
AA956_RS07970	SM01130	AA956_RS07970
AA956_RS07975	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS08010	SM00938	Nitrogen regulatory protein P-II
AA956_RS08020	SM00463	Small MutS-related domain
AA956_RS08030	SM00843	AA956_RS08030
AA956_RS08040	SM00382	ATPases associated with a variety of cellular activities
AA956_RS08080	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS08090	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AA956_RS08090	SM00091	PAS domain
AA956_RS08090	SM00267	diguanylate cyclase
AA956_RS08095	SM00052	Putative diguanylate phosphodiesterase
AA956_RS08100	SM00869	Autotransporter beta-domain
AA956_RS08105	SM00052	Putative diguanylate phosphodiesterase
AA956_RS08105	SM00267	diguanylate cyclase
AA956_RS08110	SM00895	AA956_RS08110
AA956_RS08135	SM00382	ATPases associated with a variety of cellular activities
AA956_RS08215	SM00382	ATPases associated with a variety of cellular activities
AA956_RS08235	SM01130	AA956_RS08235
AA956_RS08245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS08245	SM00895	AA956_RS08245
AA956_RS08250	SM00869	Autotransporter beta-domain
AA956_RS08265	SM00382	ATPases associated with a variety of cellular activities
AA956_RS08305	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AA956_RS08310	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS08315	SM00420	helix_turn_helix, Deoxyribose operon repressor
AA956_RS08315	SM01134	AA956_RS08315
AA956_RS08345	SM01007	Class II Aldolase and Adducin N-terminal domain
AA956_RS08365	SM00965	Secretin and TonB N terminus short domain
AA956_RS08390	SM00965	Secretin and TonB N terminus short domain
AA956_RS08405	SM00912	haemagglutination activity domain
AA956_RS08420	SM00382	ATPases associated with a variety of cellular activities
AA956_RS08430	SM00387	Histidine kinase-like ATPases
AA956_RS08435	SM00421	helix_turn_helix, Lux Regulon
AA956_RS08435	SM00448	cheY-homologous receiver domain
AA956_RS08440	SM00869	Autotransporter beta-domain
AA956_RS08520	SM00729	Elongator protein 3, MiaB family, Radical SAM
AA956_RS08540	SM00861	Transketolase, pyrimidine binding domain
AA956_RS08600	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS08605	SM00411	bacterial (prokaryotic) histone like domain
AA956_RS08630	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AA956_RS08640	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS08665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS08665	SM00895	AA956_RS08665
AA956_RS08685	SM00893	Electron transfer flavoprotein domain
AA956_RS08690	SM00893	Electron transfer flavoprotein domain
AA956_RS08705	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS08720	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS08725	SM00822	AA956_RS08725
AA956_RS08765	SM00382	ATPases associated with a variety of cellular activities
AA956_RS08805	SM00382	ATPases associated with a variety of cellular activities
AA956_RS08895	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AA956_RS08895	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AA956_RS08900	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AA956_RS08910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS08910	SM00895	AA956_RS08910
AA956_RS08940	SM00091	PAS domain
AA956_RS08970	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AA956_RS08970	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AA956_RS08990	SM00248	ankyrin repeats
AA956_RS09005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS09005	SM00895	AA956_RS09005
AA956_RS09010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS09010	SM00895	AA956_RS09010
AA956_RS09065	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AA956_RS09125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS09125	SM00895	AA956_RS09125
AA956_RS09155	SM00831	Cation transporter/ATPase, N-terminus
AA956_RS09165	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS09175	SM00903	Flavin reductase like domain
AA956_RS09200	SM00382	ATPases associated with a variety of cellular activities
AA956_RS09205	SM00382	ATPases associated with a variety of cellular activities
AA956_RS09230	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS09245	SM00420	helix_turn_helix, Deoxyribose operon repressor
AA956_RS09245	SM01134	AA956_RS09245
AA956_RS09250	SM00344	helix_turn_helix ASNC type
AA956_RS09290	SM00903	Flavin reductase like domain
AA956_RS09305	SM00429	ig-like, plexins, transcription factors
AA956_RS09305	SM00869	Autotransporter beta-domain
AA956_RS09365	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS09415	SM00477	DNA/RNA non-specific endonuclease
AA956_RS09415	SM00892	DNA/RNA non-specific endonuclease
AA956_RS09465	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS09540	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AA956_RS09540	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AA956_RS09550	SM00344	helix_turn_helix ASNC type
AA956_RS09555	SM00729	Elongator protein 3, MiaB family, Radical SAM
AA956_RS09620	SM00479	AA956_RS09620
AA956_RS09625	SM00852	Probable molybdopterin binding domain
AA956_RS09655	SM00382	ATPases associated with a variety of cellular activities
AA956_RS09660	SM00382	ATPases associated with a variety of cellular activities
AA956_RS09665	SM00267	diguanylate cyclase
AA956_RS09680	SM00382	ATPases associated with a variety of cellular activities
AA956_RS09770	SM00382	ATPases associated with a variety of cellular activities
AA956_RS09775	SM00387	Histidine kinase-like ATPases
AA956_RS09775	SM00433	TopoisomeraseII
AA956_RS09790	SM00434	DNA Topoisomerase IV
AA956_RS09835	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS09840	SM00387	Histidine kinase-like ATPases
AA956_RS09850	SM00986	Uracil DNA glycosylase superfamily
AA956_RS09850	SM00987	UreE urease accessory protein, C-terminal domain 
AA956_RS09875	SM00382	ATPases associated with a variety of cellular activities
AA956_RS09905	SM00478	endonuclease III
AA956_RS09930	SM00487	DEAD-like helicases superfamily
AA956_RS09930	SM00490	helicase superfamily c-terminal domain
AA956_RS09935	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS09940	SM00226	Low molecular weight phosphatase family
AA956_RS09970	SM00271	DnaJ molecular chaperone homology domain
AA956_RS10015	SM00937	AA956_RS10015
AA956_RS10065	SM00382	ATPases associated with a variety of cellular activities
AA956_RS10095	SM01192	AA956_RS10095
AA956_RS10095	SM01193	AA956_RS10095
AA956_RS10130	SM00481	DNA polymerase alpha chain like domain
AA956_RS10155	SM01130	AA956_RS10155
AA956_RS10165	SM00849	Metallo-beta-lactamase superfamily
AA956_RS10175	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AA956_RS10190	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AA956_RS10190	SM00534	ATPase domain of DNA mismatch repair MUTS family
AA956_RS10195	SM00267	diguanylate cyclase
AA956_RS10195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS10200	SM00421	helix_turn_helix, Lux Regulon
AA956_RS10205	SM00829	Enoylreductase
AA956_RS10250	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AA956_RS10255	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AA956_RS10335	SM00855	Phosphoglycerate mutase family
AA956_RS10375	SM00631	AA956_RS10375
AA956_RS10400	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS10400	SM00478	endonuclease III
AA956_RS10400	SM01009	AlkA N-terminal domain
AA956_RS10420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS10420	SM00866	AA956_RS10420
AA956_RS10470	SM01329	AA956_RS10470
AA956_RS10475	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AA956_RS10565	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS10585	SM00382	ATPases associated with a variety of cellular activities
AA956_RS10630	SM00028	Tetratricopeptide repeats
AA956_RS10635	SM00840	AA956_RS10635
AA956_RS10640	SM00478	endonuclease III
AA956_RS10650	SM00977	TilS substrate C-terminal domain
AA956_RS10695	SM00382	ATPases associated with a variety of cellular activities
AA956_RS10720	SM00357	Cold shock protein domain
AA956_RS10720	SM00382	ATPases associated with a variety of cellular activities
AA956_RS10720	SM00959	Rho termination factor, N-terminal domain
AA956_RS10730	SM00382	ATPases associated with a variety of cellular activities
AA956_RS10740	SM00493	AA956_RS10740
AA956_RS10745	SM00382	ATPases associated with a variety of cellular activities
AA956_RS10795	SM00421	helix_turn_helix, Lux Regulon
AA956_RS10810	SM00382	ATPases associated with a variety of cellular activities
AA956_RS10830	SM00257	Lysin motif
AA956_RS10855	SM00562	AA956_RS10855
AA956_RS10865	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS10885	SM00564	beta-propeller repeat
AA956_RS10905	SM00244	prohibitin homologues
AA956_RS10910	SM00244	prohibitin homologues
AA956_RS10925	SM00788	Adenylosuccinate synthetase
AA956_RS10950	SM00421	helix_turn_helix, Lux Regulon
AA956_RS10950	SM00448	cheY-homologous receiver domain
AA956_RS10955	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AA956_RS10955	SM00091	PAS domain
AA956_RS10955	SM00387	Histidine kinase-like ATPases
AA956_RS10955	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS11005	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS11030	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS11030	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AA956_RS11095	SM00849	Metallo-beta-lactamase superfamily
AA956_RS11110	SM00822	AA956_RS11110
AA956_RS11125	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS11130	SM00822	AA956_RS11130
AA956_RS11140	SM00357	Cold shock protein domain
AA956_RS11155	SM00267	diguanylate cyclase
AA956_RS11165	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS11165	SM00895	AA956_RS11165
AA956_RS11195	SM00636	AA956_RS11195
AA956_RS11215	SM00838	Elongation factor G C-terminus
AA956_RS11215	SM00889	Elongation factor G, domain IV
AA956_RS11220	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS11220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS11280	SM00450	Rhodanese Homology Domain
AA956_RS11285	SM01230	AA956_RS11285
AA956_RS11290	SM00387	Histidine kinase-like ATPases
AA956_RS11290	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS11295	SM00382	ATPases associated with a variety of cellular activities
AA956_RS11295	SM00448	cheY-homologous receiver domain
AA956_RS11520	SM00382	ATPases associated with a variety of cellular activities
AA956_RS11550	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS11695	SM00487	DEAD-like helicases superfamily
AA956_RS11790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS11790	SM00895	AA956_RS11790
AA956_RS11805	SM00822	AA956_RS11805
AA956_RS11835	SM00382	ATPases associated with a variety of cellular activities
AA956_RS11850	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS11875	SM00316	Ribosomal protein S1-like RNA-binding domain
AA956_RS11875	SM00357	Cold shock protein domain
AA956_RS11875	SM00955	AA956_RS11875
AA956_RS11880	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AA956_RS11910	SM00382	ATPases associated with a variety of cellular activities
AA956_RS11910	SM00487	DEAD-like helicases superfamily
AA956_RS11910	SM00490	helicase superfamily c-terminal domain
AA956_RS11910	SM00847	Helicase associated domain (HA2)  Add an annotation
AA956_RS11930	SM00852	Probable molybdopterin binding domain
AA956_RS11935	SM00829	Enoylreductase
AA956_RS11950	SM00100	Cyclic nucleotide-monophosphate binding domain
AA956_RS11950	SM00419	helix_turn_helix, cAMP Regulatory protein
AA956_RS11960	SM00363	S4 RNA-binding domain
AA956_RS11970	SM00316	Ribosomal protein S1-like RNA-binding domain
AA956_RS11970	SM00322	K homology RNA-binding domain
AA956_RS12010	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS12015	SM00838	Elongation factor G C-terminus
AA956_RS12050	SM00382	ATPases associated with a variety of cellular activities
AA956_RS12060	SM00870	AA956_RS12060
AA956_RS12105	SM00382	ATPases associated with a variety of cellular activities
AA956_RS12130	SM00670	Large family of predicted nucleotide-binding domains
AA956_RS12195	SM00852	Probable molybdopterin binding domain
AA956_RS12215	SM00382	ATPases associated with a variety of cellular activities
AA956_RS12215	SM01086	C-terminal, D2-small domain, of ClpB protein
AA956_RS12230	SM00448	cheY-homologous receiver domain
AA956_RS12230	SM00850	LytTr DNA-binding domain
AA956_RS12235	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS12285	SM00487	DEAD-like helicases superfamily
AA956_RS12285	SM00490	helicase superfamily c-terminal domain
AA956_RS12300	SM00986	Uracil DNA glycosylase superfamily
AA956_RS12300	SM00987	UreE urease accessory protein, C-terminal domain 
AA956_RS12320	SM01005	Alanine racemase, C-terminal domain
AA956_RS12325	SM00382	ATPases associated with a variety of cellular activities
AA956_RS12330	SM00382	ATPases associated with a variety of cellular activities
AA956_RS12335	SM00155	Phospholipase D. Active site motifs.
AA956_RS12370	SM00968	SMC proteins Flexible Hinge Domain
AA956_RS12375	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AA956_RS12380	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AA956_RS12380	SM00292	breast cancer carboxy-terminal domain
AA956_RS12380	SM00532	Ligase N family
AA956_RS12390	SM00363	S4 RNA-binding domain
AA956_RS12395	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AA956_RS12440	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AA956_RS12450	SM00935	Outer membrane protein (OmpH-like)
AA956_RS12500	SM00244	prohibitin homologues
AA956_RS12525	SM00116	Domain in cystathionine beta-synthase and other proteins.
AA956_RS12525	SM01240	AA956_RS12525
AA956_RS12555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS12625	SM00464	Found in ATP-dependent protease La (LON)
AA956_RS12635	SM00382	ATPases associated with a variety of cellular activities
AA956_RS12640	SM00382	ATPases associated with a variety of cellular activities
AA956_RS12660	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS12660	SM00895	AA956_RS12660
AA956_RS12715	SM00460	Transglutaminase/protease-like homologues
AA956_RS12755	SM00382	ATPases associated with a variety of cellular activities
AA956_RS12775	SM00382	ATPases associated with a variety of cellular activities
AA956_RS12800	SM00267	diguanylate cyclase
AA956_RS12815	SM00422	helix_turn_helix, mercury resistance
AA956_RS12830	SM00880	AA956_RS12830
AA956_RS12835	SM00411	bacterial (prokaryotic) histone like domain
AA956_RS12920	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AA956_RS12925	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AA956_RS12925	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AA956_RS12995	SM00382	ATPases associated with a variety of cellular activities
AA956_RS13010	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS13015	SM00267	diguanylate cyclase
AA956_RS13025	SM00869	Autotransporter beta-domain
AA956_RS13040	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS13050	SM00052	Putative diguanylate phosphodiesterase
AA956_RS13050	SM00267	diguanylate cyclase
AA956_RS13075	SM00382	ATPases associated with a variety of cellular activities
AA956_RS13080	SM00382	ATPases associated with a variety of cellular activities
AA956_RS13125	SM00052	Putative diguanylate phosphodiesterase
AA956_RS13125	SM00267	diguanylate cyclase
AA956_RS13140	SM00267	diguanylate cyclase
AA956_RS13190	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS13210	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS13210	SM00387	Histidine kinase-like ATPases
AA956_RS13210	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS13215	SM00448	cheY-homologous receiver domain
AA956_RS13215	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS13250	SM00387	Histidine kinase-like ATPases
AA956_RS13250	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS13255	SM00448	cheY-homologous receiver domain
AA956_RS13255	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS13270	SM00487	DEAD-like helicases superfamily
AA956_RS13270	SM00490	helicase superfamily c-terminal domain
AA956_RS13325	SM00267	diguanylate cyclase
AA956_RS13365	SM00100	Cyclic nucleotide-monophosphate binding domain
AA956_RS13385	SM00226	Low molecular weight phosphatase family
AA956_RS13390	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AA956_RS13440	SM00796	Allophanate hydrolase subunit 1
AA956_RS13440	SM00797	Allophanate hydrolase subunit 2
AA956_RS13440	SM00878	Biotin carboxylase C-terminal domain
AA956_RS13445	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS13445	SM00895	AA956_RS13445
AA956_RS13485	SM00899	AA956_RS13485
AA956_RS13525	SM00382	ATPases associated with a variety of cellular activities
AA956_RS13530	SM00382	ATPases associated with a variety of cellular activities
AA956_RS13620	SM00749	bacterial OsmY and nodulation domain
AA956_RS13640	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AA956_RS13645	SM00829	Enoylreductase
AA956_RS13655	SM00091	PAS domain
AA956_RS13655	SM00387	Histidine kinase-like ATPases
AA956_RS13660	SM00829	Enoylreductase
AA956_RS13665	SM00100	Cyclic nucleotide-monophosphate binding domain
AA956_RS13665	SM00419	helix_turn_helix, cAMP Regulatory protein
AA956_RS13670	SM00421	helix_turn_helix, Lux Regulon
AA956_RS13670	SM00448	cheY-homologous receiver domain
AA956_RS13690	SM00267	diguanylate cyclase
AA956_RS13695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS13695	SM00895	AA956_RS13695
AA956_RS13730	SM01236	AA956_RS13730
AA956_RS13770	SM01350	AA956_RS13770
AA956_RS13775	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS13785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS13790	SM00267	diguanylate cyclase
AA956_RS13795	SM00382	ATPases associated with a variety of cellular activities
AA956_RS13815	SM00422	helix_turn_helix, mercury resistance
AA956_RS13825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS13860	SM00422	helix_turn_helix, mercury resistance
AA956_RS13875	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS13875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS13905	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS13930	SM01119	AA956_RS13930
AA956_RS13950	SM00382	ATPases associated with a variety of cellular activities
AA956_RS13975	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS13975	SM00866	AA956_RS13975
AA956_RS14020	SM00382	ATPases associated with a variety of cellular activities
AA956_RS14065	SM01130	AA956_RS14065
AA956_RS14075	SM00382	ATPases associated with a variety of cellular activities
AA956_RS14120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS14120	SM00895	AA956_RS14120
AA956_RS14165	SM00421	helix_turn_helix, Lux Regulon
AA956_RS14165	SM00448	cheY-homologous receiver domain
AA956_RS14170	SM00387	Histidine kinase-like ATPases
AA956_RS14200	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS14200	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AA956_RS14240	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS14255	SM00965	Secretin and TonB N terminus short domain
AA956_RS14265	SM00422	helix_turn_helix, mercury resistance
AA956_RS14275	SM00901	AA956_RS14275
AA956_RS14280	SM00091	PAS domain
AA956_RS14280	SM00267	diguanylate cyclase
AA956_RS14295	SM01130	AA956_RS14295
AA956_RS14300	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS14300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS14340	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS14380	SM00014	Acid phosphatase homologues
AA956_RS14395	SM00822	AA956_RS14395
AA956_RS14450	SM00382	ATPases associated with a variety of cellular activities
AA956_RS14605	SM00411	bacterial (prokaryotic) histone like domain
AA956_RS14715	SM00028	Tetratricopeptide repeats
AA956_RS14825	SM00387	Histidine kinase-like ATPases
AA956_RS14825	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS14825	SM00448	cheY-homologous receiver domain
AA956_RS14830	SM00421	helix_turn_helix, Lux Regulon
AA956_RS14830	SM00448	cheY-homologous receiver domain
AA956_RS14850	SM00881	CoA binding domain
AA956_RS14865	SM00972	Spore Coat Protein U domain
AA956_RS14880	SM00972	Spore Coat Protein U domain
AA956_RS14895	SM00382	ATPases associated with a variety of cellular activities
AA956_RS14905	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS14905	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AA956_RS14915	SM00344	helix_turn_helix ASNC type
AA956_RS14930	SM00387	Histidine kinase-like ATPases
AA956_RS14930	SM00448	cheY-homologous receiver domain
AA956_RS14935	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS14935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS14965	SM00248	ankyrin repeats
AA956_RS15005	SM00829	Enoylreductase
AA956_RS15025	SM00382	ATPases associated with a variety of cellular activities
AA956_RS15030	SM00382	ATPases associated with a variety of cellular activities
AA956_RS15080	SM01211	AA956_RS15080
AA956_RS15100	SM00382	ATPases associated with a variety of cellular activities
AA956_RS15130	SM00411	bacterial (prokaryotic) histone like domain
AA956_RS15135	SM00382	ATPases associated with a variety of cellular activities
AA956_RS15135	SM00464	Found in ATP-dependent protease La (LON)
AA956_RS15140	SM00382	ATPases associated with a variety of cellular activities
AA956_RS15140	SM00994	ClpX C4-type zinc finger
AA956_RS15140	SM01086	C-terminal, D2-small domain, of ClpB protein
AA956_RS15165	SM00822	AA956_RS15165
AA956_RS15245	SM00382	ATPases associated with a variety of cellular activities
AA956_RS15250	SM01209	AA956_RS15250
AA956_RS15255	SM01209	AA956_RS15255
AA956_RS15315	SM00116	Domain in cystathionine beta-synthase and other proteins.
AA956_RS15350	SM00357	Cold shock protein domain
AA956_RS15415	SM00382	ATPases associated with a variety of cellular activities
AA956_RS15540	SM00855	Phosphoglycerate mutase family
AA956_RS15555	SM00534	ATPase domain of DNA mismatch repair MUTS family
AA956_RS15560	SM00534	ATPase domain of DNA mismatch repair MUTS family
AA956_RS15590	SM01192	AA956_RS15590
AA956_RS15590	SM01193	AA956_RS15590
AA956_RS15650	SM00965	Secretin and TonB N terminus short domain
AA956_RS15705	SM00448	cheY-homologous receiver domain
AA956_RS15705	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS15710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS15710	SM00387	Histidine kinase-like ATPases
AA956_RS15710	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS15735	SM00487	DEAD-like helicases superfamily
AA956_RS15735	SM00490	helicase superfamily c-terminal domain
AA956_RS15735	SM00982	AA956_RS15735
AA956_RS15735	SM01058	CarD-like/TRCF domain
AA956_RS15765	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS15790	SM00729	Elongator protein 3, MiaB family, Radical SAM
AA956_RS15800	SM00822	AA956_RS15800
AA956_RS15835	SM00491	AA956_RS15835
AA956_RS15850	SM00316	Ribosomal protein S1-like RNA-binding domain
AA956_RS15850	SM00732	Likely ribonuclease with RNase H fold.
AA956_RS15865	SM00382	ATPases associated with a variety of cellular activities
AA956_RS15880	SM00028	Tetratricopeptide repeats
AA956_RS15910	SM00858	AA956_RS15910
AA956_RS15950	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS15995	SM00861	Transketolase, pyrimidine binding domain
AA956_RS16015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS16015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS16070	SM00869	Autotransporter beta-domain
AA956_RS16095	SM00421	helix_turn_helix, Lux Regulon
AA956_RS16100	SM00267	diguanylate cyclase
AA956_RS16110	SM01034	Sensors of blue-light using FAD
AA956_RS16145	SM00382	ATPases associated with a variety of cellular activities
AA956_RS16150	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS16165	SM00903	Flavin reductase like domain
AA956_RS16170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AA956_RS16170	SM00267	diguanylate cyclase
AA956_RS16185	SM00052	Putative diguanylate phosphodiesterase
AA956_RS16185	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AA956_RS16185	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AA956_RS16185	SM00091	PAS domain
AA956_RS16185	SM00267	diguanylate cyclase
AA956_RS16220	SM00267	diguanylate cyclase
AA956_RS16225	SM00052	Putative diguanylate phosphodiesterase
AA956_RS16225	SM00267	diguanylate cyclase
AA956_RS16230	SM00422	helix_turn_helix, mercury resistance
AA956_RS16235	SM00411	bacterial (prokaryotic) histone like domain
AA956_RS16240	SM00873	B3/4 domain
AA956_RS16240	SM00874	tRNA synthetase B5 domain
AA956_RS16240	SM00896	Ferredoxin-fold anticodon binding domain
AA956_RS16265	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AA956_RS16275	SM00954	Region found in RelA / SpoT proteins
AA956_RS16295	SM00882	Coenzyme A transferase
AA956_RS16300	SM00882	Coenzyme A transferase
AA956_RS16305	SM00421	helix_turn_helix, Lux Regulon
AA956_RS16340	SM00563	Phosphate acyltransferases
AA956_RS16345	SM00116	Domain in cystathionine beta-synthase and other proteins.
AA956_RS16395	SM00422	helix_turn_helix, mercury resistance
AA956_RS16435	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AA956_RS16455	SM00316	Ribosomal protein S1-like RNA-binding domain
AA956_RS16455	SM00322	K homology RNA-binding domain
AA956_RS16460	SM01387	AA956_RS16460
AA956_RS16475	SM00917	LeuA allosteric (dimerisation) domain
AA956_RS16480	SM00257	Lysin motif
AA956_RS16570	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AA956_RS16605	SM00448	cheY-homologous receiver domain
AA956_RS16605	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS16610	SM00387	Histidine kinase-like ATPases
AA956_RS16610	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS16630	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS16645	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS16680	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AA956_RS16680	SM00954	Region found in RelA / SpoT proteins
AA956_RS16685	SM01409	AA956_RS16685
AA956_RS16690	SM00072	Guanylate kinase homologues.
AA956_RS16690	SM00382	ATPases associated with a variety of cellular activities
AA956_RS16710	SM00729	Elongator protein 3, MiaB family, Radical SAM
AA956_RS16805	SM00382	ATPases associated with a variety of cellular activities
AA956_RS16805	SM01086	C-terminal, D2-small domain, of ClpB protein
AA956_RS16810	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS16815	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS16815	SM00448	cheY-homologous receiver domain
AA956_RS16820	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS16825	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS16830	SM00014	Acid phosphatase homologues
AA956_RS16910	SM00382	ATPases associated with a variety of cellular activities
AA956_RS16930	SM00382	ATPases associated with a variety of cellular activities
AA956_RS16940	SM00100	Cyclic nucleotide-monophosphate binding domain
AA956_RS16950	SM00267	diguanylate cyclase
AA956_RS16985	SM00382	ATPases associated with a variety of cellular activities
AA956_RS17005	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS17005	SM00871	Bacterial transcription activator, effector binding domain
AA956_RS17010	SM00450	Rhodanese Homology Domain
AA956_RS17035	SM01007	Class II Aldolase and Adducin N-terminal domain
AA956_RS17085	SM00382	ATPases associated with a variety of cellular activities
AA956_RS17125	SM00420	helix_turn_helix, Deoxyribose operon repressor
AA956_RS17125	SM01134	AA956_RS17125
AA956_RS17165	SM00091	PAS domain
AA956_RS17165	SM00382	ATPases associated with a variety of cellular activities
AA956_RS17215	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS17245	SM00052	Putative diguanylate phosphodiesterase
AA956_RS17265	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS17265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS17275	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS17275	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS17280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS17280	SM00895	AA956_RS17280
AA956_RS17285	SM00870	AA956_RS17285
AA956_RS17310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS17330	SM00400	zinc finger
AA956_RS17330	SM00493	AA956_RS17330
AA956_RS17355	SM00861	Transketolase, pyrimidine binding domain
AA956_RS17380	SM00450	Rhodanese Homology Domain
AA956_RS17400	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AA956_RS17400	SM00474	3'-5' exonuclease
AA956_RS17400	SM00475	5'-3' exonuclease
AA956_RS17400	SM00482	DNA polymerase A domain
AA956_RS17470	SM01007	Class II Aldolase and Adducin N-terminal domain
AA956_RS17480	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AA956_RS17525	SM00382	ATPases associated with a variety of cellular activities
AA956_RS17530	SM00382	ATPases associated with a variety of cellular activities
AA956_RS17550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS17550	SM00866	AA956_RS17550
AA956_RS17570	SM00849	Metallo-beta-lactamase superfamily
AA956_RS17640	SM00912	haemagglutination activity domain
AA956_RS17655	SM00965	Secretin and TonB N terminus short domain
AA956_RS17660	SM00912	haemagglutination activity domain
AA956_RS17685	SM00855	Phosphoglycerate mutase family
AA956_RS17705	SM00387	Histidine kinase-like ATPases
AA956_RS17705	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS17710	SM00448	cheY-homologous receiver domain
AA956_RS17710	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS17720	SM00382	ATPases associated with a variety of cellular activities
AA956_RS17750	SM00382	ATPases associated with a variety of cellular activities
AA956_RS17760	SM01103	AA956_RS17760
AA956_RS17775	SM00851	MGS-like domain
AA956_RS17775	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AA956_RS17785	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AA956_RS17790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS17790	SM00895	AA956_RS17790
AA956_RS17800	SM00822	AA956_RS17800
AA956_RS17880	SM00257	Lysin motif
AA956_RS17885	SM00849	Metallo-beta-lactamase superfamily
AA956_RS17900	SM00479	AA956_RS17900
AA956_RS17965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS17980	SM00487	DEAD-like helicases superfamily
AA956_RS17980	SM00490	helicase superfamily c-terminal domain
AA956_RS18000	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS18010	SM00052	Putative diguanylate phosphodiesterase
AA956_RS18010	SM00267	diguanylate cyclase
AA956_RS18025	SM00481	DNA polymerase alpha chain like domain
AA956_RS18065	SM00422	helix_turn_helix, mercury resistance
AA956_RS18100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS18100	SM00895	AA956_RS18100
AA956_RS18120	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AA956_RS18125	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AA956_RS18230	SM00248	ankyrin repeats
AA956_RS18245	SM00382	ATPases associated with a variety of cellular activities
AA956_RS18265	SM00354	helix_turn _helix lactose operon repressor
AA956_RS18315	SM00382	ATPases associated with a variety of cellular activities
AA956_RS18320	SM00382	ATPases associated with a variety of cellular activities
AA956_RS18385	SM00869	Autotransporter beta-domain
AA956_RS18390	SM00869	Autotransporter beta-domain
AA956_RS18405	SM00829	Enoylreductase
AA956_RS18445	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS18475	SM00460	Transglutaminase/protease-like homologues
AA956_RS18545	SM00344	helix_turn_helix ASNC type
AA956_RS18550	SM00267	diguanylate cyclase
AA956_RS18645	SM00344	helix_turn_helix ASNC type
AA956_RS18680	SM00382	ATPases associated with a variety of cellular activities
AA956_RS18745	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS18765	SM01119	AA956_RS18765
AA956_RS18785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS18785	SM00895	AA956_RS18785
AA956_RS18795	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS18820	SM00382	ATPases associated with a variety of cellular activities
AA956_RS18825	SM00382	ATPases associated with a variety of cellular activities
AA956_RS18845	SM00450	Rhodanese Homology Domain
AA956_RS18865	SM01007	Class II Aldolase and Adducin N-terminal domain
AA956_RS18880	SM00382	ATPases associated with a variety of cellular activities
AA956_RS18890	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS18940	SM00344	helix_turn_helix ASNC type
AA956_RS19045	SM00382	ATPases associated with a variety of cellular activities
AA956_RS19055	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS19055	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AA956_RS19085	SM00903	Flavin reductase like domain
AA956_RS19090	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS19115	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS19195	SM00382	ATPases associated with a variety of cellular activities
AA956_RS19235	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AA956_RS19245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS19245	SM00387	Histidine kinase-like ATPases
AA956_RS19245	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS19250	SM00448	cheY-homologous receiver domain
AA956_RS19250	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS19275	SM01001	AIR carboxylase
AA956_RS19365	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS19385	SM00883	Chaperonin 10 Kd subunit
AA956_RS19500	SM00947	Carbonic anhydrase
AA956_RS19505	SM00422	helix_turn_helix, mercury resistance
AA956_RS19525	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AA956_RS19545	SM00883	Chaperonin 10 Kd subunit
AA956_RS19575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS19575	SM00387	Histidine kinase-like ATPases
AA956_RS19575	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS19580	SM00448	cheY-homologous receiver domain
AA956_RS19580	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS19630	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS19655	SM00895	AA956_RS19655
AA956_RS19665	SM00267	diguanylate cyclase
AA956_RS19680	SM00465	GIY-YIG type nucleases (URI domain)
AA956_RS19680	SM00479	AA956_RS19680
AA956_RS19705	SM00382	ATPases associated with a variety of cellular activities
AA956_RS19710	SM00382	ATPases associated with a variety of cellular activities
AA956_RS19800	SM00382	ATPases associated with a variety of cellular activities
AA956_RS19830	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS19855	SM01012	AA956_RS19855
AA956_RS19865	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AA956_RS19905	SM00822	AA956_RS19905
AA956_RS19910	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS19915	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS19945	SM00421	helix_turn_helix, Lux Regulon
AA956_RS19990	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS20030	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS20070	SM00822	AA956_RS20070
AA956_RS20090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS20090	SM00895	AA956_RS20090
AA956_RS20100	SM00382	ATPases associated with a variety of cellular activities
AA956_RS20120	SM00829	Enoylreductase
AA956_RS20125	SM00851	MGS-like domain
AA956_RS20155	SM01209	AA956_RS20155
AA956_RS20155	SM01210	AA956_RS20155
AA956_RS20200	SM00382	ATPases associated with a variety of cellular activities
AA956_RS20215	SM00316	Ribosomal protein S1-like RNA-binding domain
AA956_RS20245	SM00382	ATPases associated with a variety of cellular activities
AA956_RS20250	SM00341	Helicase and RNase D C-terminal
AA956_RS20250	SM00487	DEAD-like helicases superfamily
AA956_RS20250	SM00490	helicase superfamily c-terminal domain
AA956_RS20250	SM00956	AA956_RS20250
AA956_RS20265	SM00481	DNA polymerase alpha chain like domain
AA956_RS20270	SM00450	Rhodanese Homology Domain
AA956_RS20280	SM00487	DEAD-like helicases superfamily
AA956_RS20280	SM00490	helicase superfamily c-terminal domain
AA956_RS20320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS20335	SM00116	Domain in cystathionine beta-synthase and other proteins.
AA956_RS20335	SM01091	Transporter associated domain
AA956_RS20340	SM00382	ATPases associated with a variety of cellular activities
AA956_RS20360	SM00421	helix_turn_helix, Lux Regulon
AA956_RS20360	SM00448	cheY-homologous receiver domain
AA956_RS20390	SM00448	cheY-homologous receiver domain
AA956_RS20390	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS20395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS20395	SM00387	Histidine kinase-like ATPases
AA956_RS20395	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS20400	SM00528	Domain in histone-like proteins of HNS family
AA956_RS20425	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AA956_RS20430	SM00849	Metallo-beta-lactamase superfamily
AA956_RS20450	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS20465	SM00919	Malic enzyme, NAD binding domain
AA956_RS20465	SM01274	AA956_RS20465
AA956_RS20490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS20490	SM00387	Histidine kinase-like ATPases
AA956_RS20490	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS20495	SM00448	cheY-homologous receiver domain
AA956_RS20495	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS20515	SM00382	ATPases associated with a variety of cellular activities
AA956_RS20550	SM00382	ATPases associated with a variety of cellular activities
AA956_RS20555	SM00382	ATPases associated with a variety of cellular activities
AA956_RS20635	SM00904	Riboflavin kinase
AA956_RS20670	SM00382	ATPases associated with a variety of cellular activities
AA956_RS20670	SM01086	C-terminal, D2-small domain, of ClpB protein
AA956_RS20680	SM00357	Cold shock protein domain
AA956_RS20715	SM00822	AA956_RS20715
AA956_RS20735	SM01329	AA956_RS20735
AA956_RS20760	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AA956_RS20805	SM00822	AA956_RS20805
AA956_RS20865	SM01207	AA956_RS20865
AA956_RS20895	SM00646	AA956_RS20895
AA956_RS20905	SM00853	MutL C terminal dimerisation domain
AA956_RS20905	SM01340	AA956_RS20905
AA956_RS20920	SM00382	ATPases associated with a variety of cellular activities
AA956_RS20985	SM00387	Histidine kinase-like ATPases
AA956_RS20985	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS20990	SM00448	cheY-homologous receiver domain
AA956_RS20990	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS20995	SM00382	ATPases associated with a variety of cellular activities
AA956_RS21040	SM00271	DnaJ molecular chaperone homology domain
AA956_RS21065	SM00363	S4 RNA-binding domain
AA956_RS21145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS21195	SM00344	helix_turn_helix ASNC type
AA956_RS21210	SM00382	ATPases associated with a variety of cellular activities
AA956_RS21215	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS21305	SM00858	AA956_RS21305
AA956_RS21310	SM01130	AA956_RS21310
AA956_RS21375	SM00382	ATPases associated with a variety of cellular activities
AA956_RS21385	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AA956_RS21395	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS21395	SM00895	AA956_RS21395
AA956_RS21405	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS21440	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AA956_RS21440	SM00465	GIY-YIG type nucleases (URI domain)
AA956_RS21450	SM00841	Elongation factor P, C-terminal
AA956_RS21450	SM01185	AA956_RS21450
AA956_RS21480	SM00358	Double-stranded RNA binding motif
AA956_RS21480	SM00535	Ribonuclease III family
AA956_RS21490	SM00838	Elongation factor G C-terminus
AA956_RS21505	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AA956_RS21525	SM00825	Beta-ketoacyl synthase
AA956_RS21535	SM00822	AA956_RS21535
AA956_RS21540	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AA956_RS21590	SM00363	S4 RNA-binding domain
AA956_RS21595	SM00316	Ribosomal protein S1-like RNA-binding domain
AA956_RS21600	SM00729	Elongator protein 3, MiaB family, Radical SAM
AA956_RS21615	SM00852	Probable molybdopterin binding domain
AA956_RS21675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS21675	SM00895	AA956_RS21675
AA956_RS21710	SM01091	Transporter associated domain
AA956_RS21715	SM00091	PAS domain
AA956_RS21715	SM00421	helix_turn_helix, Lux Regulon
AA956_RS21730	SM00357	Cold shock protein domain
AA956_RS21735	SM00257	Lysin motif
AA956_RS21790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS21790	SM00895	AA956_RS21790
AA956_RS21800	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS21800	SM00448	cheY-homologous receiver domain
AA956_RS21805	SM00387	Histidine kinase-like ATPases
AA956_RS21805	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS21805	SM00448	cheY-homologous receiver domain
AA956_RS21855	SM00267	diguanylate cyclase
AA956_RS21855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS21865	SM00052	Putative diguanylate phosphodiesterase
AA956_RS21865	SM00091	PAS domain
AA956_RS21865	SM00267	diguanylate cyclase
AA956_RS21875	SM00829	Enoylreductase
AA956_RS21935	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AA956_RS22020	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS22040	SM00357	Cold shock protein domain
AA956_RS22065	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS22075	SM00966	SpoVT / AbrB like domain 
AA956_RS22200	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS22245	SM00487	DEAD-like helicases superfamily
AA956_RS22325	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AA956_RS22325	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AA956_RS22325	SM00493	AA956_RS22325
AA956_RS22405	SM00382	ATPases associated with a variety of cellular activities
AA956_RS22405	SM01086	C-terminal, D2-small domain, of ClpB protein
AA956_RS22410	SM00155	Phospholipase D. Active site motifs.
AA956_RS22415	SM00382	ATPases associated with a variety of cellular activities
AA956_RS22465	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AA956_RS22545	SM00650	Ribosomal RNA adenine dimethylases
AA956_RS22550	SM00450	Rhodanese Homology Domain
AA956_RS22615	SM00563	Phosphate acyltransferases
AA956_RS22630	SM00732	Likely ribonuclease with RNase H fold.
AA956_RS22670	SM00881	CoA binding domain
AA956_RS22690	SM00382	ATPases associated with a variety of cellular activities
AA956_RS22695	SM00448	cheY-homologous receiver domain
AA956_RS22695	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS22700	SM00387	Histidine kinase-like ATPases
AA956_RS22700	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS22740	SM00028	Tetratricopeptide repeats
AA956_RS22750	SM00382	ATPases associated with a variety of cellular activities
AA956_RS22770	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS22775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS22775	SM01049	AA956_RS22775
AA956_RS22800	SM00382	ATPases associated with a variety of cellular activities
AA956_RS22820	SM00267	diguanylate cyclase
AA956_RS22840	SM00763	PrkA AAA domain
AA956_RS22845	SM00382	ATPases associated with a variety of cellular activities
AA956_RS22860	SM00729	Elongator protein 3, MiaB family, Radical SAM
AA956_RS22880	SM01091	Transporter associated domain
AA956_RS22895	SM00836	DALR anticodon binding domain
AA956_RS22905	SM00563	Phosphate acyltransferases
AA956_RS22930	SM00650	Ribosomal RNA adenine dimethylases
AA956_RS22960	SM01011	Aminopeptidase P, N-terminal domain
AA956_RS22980	SM00798	AICARFT/IMPCHase bienzyme
AA956_RS22980	SM00851	MGS-like domain
AA956_RS22995	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AA956_RS23005	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS23055	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AA956_RS23060	SM00861	Transketolase, pyrimidine binding domain
AA956_RS23095	SM00919	Malic enzyme, NAD binding domain
AA956_RS23095	SM01274	AA956_RS23095
AA956_RS23115	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AA956_RS23150	SM00955	AA956_RS23150
AA956_RS23185	SM00878	Biotin carboxylase C-terminal domain
AA956_RS23245	SM00644	AA956_RS23245
AA956_RS23265	SM00382	ATPases associated with a variety of cellular activities
AA956_RS23265	SM00962	SRP54-type protein, GTPase domain
AA956_RS23265	SM00963	SRP54-type protein, helical bundle domain
AA956_RS23295	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AA956_RS23325	SM01091	Transporter associated domain
AA956_RS23330	SM00382	ATPases associated with a variety of cellular activities
AA956_RS23360	SM00382	ATPases associated with a variety of cellular activities
AA956_RS23370	SM00957	SecA DEAD-like domain
AA956_RS23370	SM00958	SecA preprotein cross-linking domain
AA956_RS23385	SM00864	Tubulin/FtsZ family, GTPase domain
AA956_RS23385	SM00865	Tubulin/FtsZ family, C-terminal domain
AA956_RS23390	SM00842	Cell division protein FtsA
AA956_RS23470	SM00347	helix_turn_helix multiple antibiotic resistance protein
AA956_RS23480	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AA956_RS23520	SM00062	Bacterial periplasmic substrate-binding proteins
AA956_RS23520	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AA956_RS23555	SM00925	MltA specific insert domain
AA956_RS23595	SM00382	ATPases associated with a variety of cellular activities
AA956_RS23610	SM00387	Histidine kinase-like ATPases
AA956_RS23610	SM00388	His Kinase A (phosphoacceptor) domain
AA956_RS23615	SM00448	cheY-homologous receiver domain
AA956_RS23615	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS23650	SM01118	AA956_RS23650
AA956_RS23655	SM00986	Uracil DNA glycosylase superfamily
AA956_RS23655	SM00987	UreE urease accessory protein, C-terminal domain 
AA956_RS23680	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AA956_RS23710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS23710	SM00895	AA956_RS23710
AA956_RS23760	SM00937	AA956_RS23760
AA956_RS23795	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AA956_RS23795	SM00091	PAS domain
AA956_RS23795	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AA956_RS23795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AA956_RS23800	SM00138	Methyltransferase, chemotaxis proteins 
AA956_RS23810	SM00260	Two component signalling adaptor domain
AA956_RS23825	SM00382	ATPases associated with a variety of cellular activities
AA956_RS23855	SM00316	Ribosomal protein S1-like RNA-binding domain
AA956_RS23860	SM00116	Domain in cystathionine beta-synthase and other proteins.
AA956_RS23975	SM00028	Tetratricopeptide repeats
AA956_RS24035	SM00382	ATPases associated with a variety of cellular activities
AA956_RS24100	SM00671	Sel1-like repeats.
AA956_RS24175	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AA956_RS24275	SM00382	ATPases associated with a variety of cellular activities
AA956_RS24305	SM00382	ATPases associated with a variety of cellular activities
AA956_RS24335	SM00382	ATPases associated with a variety of cellular activities
AA956_RS24340	SM00822	AA956_RS24340
AA956_RS24375	SM01321	AA956_RS24375
AA956_RS24395	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AA956_RS24430	SM01219	AA956_RS24430
AA956_RS24470	SM01004	Delta-aminolevulinic acid dehydratase
AA956_RS24490	SM00662	RNA polymerases D
AA956_RS24495	SM00363	S4 RNA-binding domain
AA956_RS24495	SM01390	AA956_RS24495
AA956_RS24565	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AA956_RS24570	SM01374	AA956_RS24570
AA956_RS24590	SM00322	K homology RNA-binding domain
AA956_RS24605	SM01382	AA956_RS24605
AA956_RS24605	SM01383	AA956_RS24605
AA956_RS24625	SM01403	AA956_RS24625
AA956_RS24635	SM00838	Elongation factor G C-terminus
AA956_RS24635	SM00889	Elongation factor G, domain IV
AA956_RS24650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AA956_RS24665	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS24750	SM00663	RNA polymerase I subunit A N-terminus
AA956_RS24775	SM00649	Ribosomal protein L11/L12
AA956_RS24780	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AA956_RS24780	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AA956_RS24845	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS24850	SM00421	helix_turn_helix, Lux Regulon
AA956_RS24855	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS24860	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
AA956_RS24895	SM00028	Tetratricopeptide repeats
AA956_RS24900	SM00346	helix_turn_helix isocitrate lyase regulation
AA956_RS24930	SM00912	haemagglutination activity domain
AA956_RS24950	SM00014	Acid phosphatase homologues
AA956_RS24960	SM00342	helix_turn_helix, arabinose operon control protein
AA956_RS24965	SM00849	Metallo-beta-lactamase superfamily
AA956_RS24980	SM00862	Transcriptional regulatory protein, C terminal
AA956_RS25055	SM00052	Putative diguanylate phosphodiesterase
AA956_RS25060	SM00382	ATPases associated with a variety of cellular activities
AA956_RS25060	SM00843	AA956_RS25060
AA956_RS25105	SM00530	Helix-turn-helix XRE-family like proteins 
AA956_RS25145	SM00054	EF-hand, calcium binding motif
AA956_RS25185	SM00869	Autotransporter beta-domain
