AT395_RS00020	SM01234	AT395_RS00020
AT395_RS00070	SM00450	Rhodanese Homology Domain
AT395_RS00075	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS00100	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS00105	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
AT395_RS00120	SM00344	helix_turn_helix ASNC type
AT395_RS00130	SM01359	AT395_RS00130
AT395_RS00130	SM01360	AT395_RS00130
AT395_RS00150	SM00382	ATPases associated with a variety of cellular activities
AT395_RS00175	SM00344	helix_turn_helix ASNC type
AT395_RS00245	SM00382	ATPases associated with a variety of cellular activities
AT395_RS00250	SM00382	ATPases associated with a variety of cellular activities
AT395_RS00285	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS00295	SM00382	ATPases associated with a variety of cellular activities
AT395_RS00300	SM00382	ATPases associated with a variety of cellular activities
AT395_RS00305	SM01228	AT395_RS00305
AT395_RS00325	SM00470	ParB-like nuclease domain
AT395_RS00370	SM00382	ATPases associated with a variety of cellular activities
AT395_RS00410	SM00448	cheY-homologous receiver domain
AT395_RS00415	SM00073	Histidine Phosphotransfer domain
AT395_RS00415	SM00260	Two component signalling adaptor domain
AT395_RS00415	SM00387	Histidine kinase-like ATPases
AT395_RS00415	SM01231	AT395_RS00415
AT395_RS00420	SM00260	Two component signalling adaptor domain
AT395_RS00425	SM00091	PAS domain
AT395_RS00425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS00425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS00430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS00430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS00435	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS00435	SM01049	AT395_RS00435
AT395_RS00440	SM00138	Methyltransferase, chemotaxis proteins 
AT395_RS00450	SM00448	cheY-homologous receiver domain
AT395_RS00455	SM00448	cheY-homologous receiver domain
AT395_RS00475	SM00382	ATPases associated with a variety of cellular activities
AT395_RS00475	SM00962	SRP54-type protein, GTPase domain
AT395_RS00500	SM00858	AT395_RS00500
AT395_RS00545	SM00047	Lysozyme subfamily 2
AT395_RS00605	SM00382	ATPases associated with a variety of cellular activities
AT395_RS00660	SM00421	helix_turn_helix, Lux Regulon
AT395_RS00660	SM00448	cheY-homologous receiver domain
AT395_RS00665	SM00387	Histidine kinase-like ATPases
AT395_RS00670	SM00387	Histidine kinase-like ATPases
AT395_RS00670	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS00675	SM00448	cheY-homologous receiver domain
AT395_RS00675	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS00680	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS00685	SM00382	ATPases associated with a variety of cellular activities
AT395_RS00705	SM00448	cheY-homologous receiver domain
AT395_RS00705	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS00710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS00710	SM00387	Histidine kinase-like ATPases
AT395_RS00710	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS00810	SM00487	DEAD-like helicases superfamily
AT395_RS00810	SM00490	helicase superfamily c-terminal domain
AT395_RS00820	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS00830	SM00881	CoA binding domain
AT395_RS00860	SM00849	Metallo-beta-lactamase superfamily
AT395_RS00880	SM00382	ATPases associated with a variety of cellular activities
AT395_RS00900	SM00749	bacterial OsmY and nodulation domain
AT395_RS00920	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT395_RS01120	SM00028	Tetratricopeptide repeats
AT395_RS01170	SM00487	DEAD-like helicases superfamily
AT395_RS01170	SM00490	helicase superfamily c-terminal domain
AT395_RS01195	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS01215	SM00919	Malic enzyme, NAD binding domain
AT395_RS01215	SM01274	AT395_RS01215
AT395_RS01230	SM00344	helix_turn_helix ASNC type
AT395_RS01275	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS01295	SM00965	Secretin and TonB N terminus short domain
AT395_RS01330	SM00344	helix_turn_helix ASNC type
AT395_RS01340	SM00155	Phospholipase D. Active site motifs.
AT395_RS01405	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AT395_RS01405	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AT395_RS01410	SM00649	Ribosomal protein L11/L12
AT395_RS01435	SM00663	RNA polymerase I subunit A N-terminus
AT395_RS01520	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS01535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS01550	SM00838	Elongation factor G C-terminus
AT395_RS01550	SM00889	Elongation factor G, domain IV
AT395_RS01560	SM01403	AT395_RS01560
AT395_RS01580	SM01382	AT395_RS01580
AT395_RS01580	SM01383	AT395_RS01580
AT395_RS01595	SM00322	K homology RNA-binding domain
AT395_RS01615	SM01374	AT395_RS01615
AT395_RS01620	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AT395_RS01690	SM00363	S4 RNA-binding domain
AT395_RS01690	SM01390	AT395_RS01690
AT395_RS01695	SM00662	RNA polymerases D
AT395_RS01715	SM01004	Delta-aminolevulinic acid dehydratase
AT395_RS01760	SM01219	AT395_RS01760
AT395_RS01795	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT395_RS01815	SM01321	AT395_RS01815
AT395_RS01850	SM00822	AT395_RS01850
AT395_RS01855	SM00382	ATPases associated with a variety of cellular activities
AT395_RS01885	SM00382	ATPases associated with a variety of cellular activities
AT395_RS01915	SM00382	ATPases associated with a variety of cellular activities
AT395_RS02015	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT395_RS02085	SM00382	ATPases associated with a variety of cellular activities
AT395_RS02100	SM00528	Domain in histone-like proteins of HNS family
AT395_RS02180	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS02235	SM00671	Sel1-like repeats.
AT395_RS02410	SM00903	Flavin reductase like domain
AT395_RS02505	SM00671	Sel1-like repeats.
AT395_RS02570	SM00382	ATPases associated with a variety of cellular activities
AT395_RS02630	SM00028	Tetratricopeptide repeats
AT395_RS02745	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT395_RS02750	SM00316	Ribosomal protein S1-like RNA-binding domain
AT395_RS02780	SM00382	ATPases associated with a variety of cellular activities
AT395_RS02795	SM00260	Two component signalling adaptor domain
AT395_RS02805	SM00138	Methyltransferase, chemotaxis proteins 
AT395_RS02810	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AT395_RS02810	SM00091	PAS domain
AT395_RS02810	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS02810	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS02845	SM00937	AT395_RS02845
AT395_RS02895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS02895	SM00895	AT395_RS02895
AT395_RS02925	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT395_RS02950	SM00986	Uracil DNA glycosylase superfamily
AT395_RS02950	SM00987	UreE urease accessory protein, C-terminal domain 
AT395_RS02955	SM01118	AT395_RS02955
AT395_RS02990	SM00448	cheY-homologous receiver domain
AT395_RS02990	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS02995	SM00387	Histidine kinase-like ATPases
AT395_RS02995	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS03010	SM00382	ATPases associated with a variety of cellular activities
AT395_RS03050	SM00925	MltA specific insert domain
AT395_RS03085	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS03085	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AT395_RS03125	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AT395_RS03135	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS03215	SM00842	Cell division protein FtsA
AT395_RS03220	SM00864	Tubulin/FtsZ family, GTPase domain
AT395_RS03220	SM00865	Tubulin/FtsZ family, C-terminal domain
AT395_RS03235	SM00957	SecA DEAD-like domain
AT395_RS03235	SM00958	SecA preprotein cross-linking domain
AT395_RS03245	SM00382	ATPases associated with a variety of cellular activities
AT395_RS03280	SM00382	ATPases associated with a variety of cellular activities
AT395_RS03285	SM01091	Transporter associated domain
AT395_RS03315	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AT395_RS03350	SM00382	ATPases associated with a variety of cellular activities
AT395_RS03350	SM00962	SRP54-type protein, GTPase domain
AT395_RS03350	SM00963	SRP54-type protein, helical bundle domain
AT395_RS03370	SM00644	AT395_RS03370
AT395_RS03420	SM00878	Biotin carboxylase C-terminal domain
AT395_RS03455	SM00955	AT395_RS03455
AT395_RS03490	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AT395_RS03510	SM00919	Malic enzyme, NAD binding domain
AT395_RS03510	SM01274	AT395_RS03510
AT395_RS03545	SM00861	Transketolase, pyrimidine binding domain
AT395_RS03550	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AT395_RS03600	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS03610	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AT395_RS03625	SM00798	AICARFT/IMPCHase bienzyme
AT395_RS03625	SM00851	MGS-like domain
AT395_RS03645	SM01011	Aminopeptidase P, N-terminal domain
AT395_RS03675	SM00650	Ribosomal RNA adenine dimethylases
AT395_RS03700	SM00563	Phosphate acyltransferases
AT395_RS03710	SM00836	DALR anticodon binding domain
AT395_RS03725	SM01091	Transporter associated domain
AT395_RS03745	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT395_RS03760	SM00382	ATPases associated with a variety of cellular activities
AT395_RS03765	SM00763	PrkA AAA domain
AT395_RS03785	SM00267	diguanylate cyclase
AT395_RS03805	SM00382	ATPases associated with a variety of cellular activities
AT395_RS03830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS03830	SM01049	AT395_RS03830
AT395_RS03835	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS03855	SM00382	ATPases associated with a variety of cellular activities
AT395_RS03865	SM00028	Tetratricopeptide repeats
AT395_RS03915	SM00387	Histidine kinase-like ATPases
AT395_RS03915	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS03920	SM00448	cheY-homologous receiver domain
AT395_RS03920	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS03925	SM00382	ATPases associated with a variety of cellular activities
AT395_RS03945	SM00881	CoA binding domain
AT395_RS03985	SM00732	Likely ribonuclease with RNase H fold.
AT395_RS04000	SM00563	Phosphate acyltransferases
AT395_RS04065	SM00450	Rhodanese Homology Domain
AT395_RS04070	SM00650	Ribosomal RNA adenine dimethylases
AT395_RS04155	SM00422	helix_turn_helix, mercury resistance
AT395_RS04175	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT395_RS04225	SM00382	ATPases associated with a variety of cellular activities
AT395_RS04230	SM00155	Phospholipase D. Active site motifs.
AT395_RS04235	SM00382	ATPases associated with a variety of cellular activities
AT395_RS04235	SM01086	C-terminal, D2-small domain, of ClpB protein
AT395_RS04315	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AT395_RS04315	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AT395_RS04315	SM00493	AT395_RS04315
AT395_RS04395	SM00487	DEAD-like helicases superfamily
AT395_RS04440	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS04560	SM00966	SpoVT / AbrB like domain 
AT395_RS04570	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS04595	SM00357	Cold shock protein domain
AT395_RS04605	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS04615	SM00869	Autotransporter beta-domain
AT395_RS04620	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS04705	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT395_RS04765	SM00829	Enoylreductase
AT395_RS04775	SM00052	Putative diguanylate phosphodiesterase
AT395_RS04775	SM00091	PAS domain
AT395_RS04775	SM00267	diguanylate cyclase
AT395_RS04785	SM00267	diguanylate cyclase
AT395_RS04830	SM00387	Histidine kinase-like ATPases
AT395_RS04830	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS04830	SM00448	cheY-homologous receiver domain
AT395_RS04835	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS04835	SM00448	cheY-homologous receiver domain
AT395_RS04845	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS04845	SM00895	AT395_RS04845
AT395_RS04900	SM00257	Lysin motif
AT395_RS04905	SM00357	Cold shock protein domain
AT395_RS04920	SM00091	PAS domain
AT395_RS04920	SM00421	helix_turn_helix, Lux Regulon
AT395_RS04925	SM01091	Transporter associated domain
AT395_RS04960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS04960	SM00895	AT395_RS04960
AT395_RS05020	SM00852	Probable molybdopterin binding domain
AT395_RS05035	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT395_RS05040	SM00316	Ribosomal protein S1-like RNA-binding domain
AT395_RS05045	SM00363	S4 RNA-binding domain
AT395_RS05095	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AT395_RS05100	SM00822	AT395_RS05100
AT395_RS05110	SM00825	Beta-ketoacyl synthase
AT395_RS05130	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT395_RS05145	SM00838	Elongation factor G C-terminus
AT395_RS05155	SM00358	Double-stranded RNA binding motif
AT395_RS05155	SM00535	Ribonuclease III family
AT395_RS05185	SM00841	Elongation factor P, C-terminal
AT395_RS05185	SM01185	AT395_RS05185
AT395_RS05195	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AT395_RS05195	SM00465	GIY-YIG type nucleases (URI domain)
AT395_RS05240	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS05250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS05250	SM00895	AT395_RS05250
AT395_RS05260	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AT395_RS05270	SM00382	ATPases associated with a variety of cellular activities
AT395_RS05335	SM01130	AT395_RS05335
AT395_RS05340	SM00858	AT395_RS05340
AT395_RS05430	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS05435	SM00382	ATPases associated with a variety of cellular activities
AT395_RS05450	SM00344	helix_turn_helix ASNC type
AT395_RS05500	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS05580	SM00363	S4 RNA-binding domain
AT395_RS05605	SM00271	DnaJ molecular chaperone homology domain
AT395_RS05650	SM00382	ATPases associated with a variety of cellular activities
AT395_RS05655	SM00448	cheY-homologous receiver domain
AT395_RS05655	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS05660	SM00387	Histidine kinase-like ATPases
AT395_RS05660	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS05725	SM00382	ATPases associated with a variety of cellular activities
AT395_RS05740	SM00853	MutL C terminal dimerisation domain
AT395_RS05740	SM01340	AT395_RS05740
AT395_RS05750	SM00646	AT395_RS05750
AT395_RS05780	SM01207	AT395_RS05780
AT395_RS05840	SM00822	AT395_RS05840
AT395_RS05885	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT395_RS05910	SM01329	AT395_RS05910
AT395_RS05930	SM00822	AT395_RS05930
AT395_RS05965	SM00357	Cold shock protein domain
AT395_RS05975	SM00382	ATPases associated with a variety of cellular activities
AT395_RS05975	SM01086	C-terminal, D2-small domain, of ClpB protein
AT395_RS06010	SM00904	Riboflavin kinase
AT395_RS06090	SM00382	ATPases associated with a variety of cellular activities
AT395_RS06095	SM00382	ATPases associated with a variety of cellular activities
AT395_RS06130	SM00382	ATPases associated with a variety of cellular activities
AT395_RS06150	SM00448	cheY-homologous receiver domain
AT395_RS06150	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS06155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS06155	SM00387	Histidine kinase-like ATPases
AT395_RS06155	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS06185	SM00919	Malic enzyme, NAD binding domain
AT395_RS06185	SM01274	AT395_RS06185
AT395_RS06200	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS06220	SM00849	Metallo-beta-lactamase superfamily
AT395_RS06250	SM00528	Domain in histone-like proteins of HNS family
AT395_RS06255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS06255	SM00387	Histidine kinase-like ATPases
AT395_RS06255	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS06260	SM00448	cheY-homologous receiver domain
AT395_RS06260	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS06290	SM00421	helix_turn_helix, Lux Regulon
AT395_RS06290	SM00448	cheY-homologous receiver domain
AT395_RS06310	SM00382	ATPases associated with a variety of cellular activities
AT395_RS06315	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT395_RS06315	SM01091	Transporter associated domain
AT395_RS06330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS06370	SM00487	DEAD-like helicases superfamily
AT395_RS06370	SM00490	helicase superfamily c-terminal domain
AT395_RS06380	SM00450	Rhodanese Homology Domain
AT395_RS06385	SM00481	DNA polymerase alpha chain like domain
AT395_RS06400	SM00341	Helicase and RNase D C-terminal
AT395_RS06400	SM00487	DEAD-like helicases superfamily
AT395_RS06400	SM00490	helicase superfamily c-terminal domain
AT395_RS06400	SM00956	AT395_RS06400
AT395_RS06405	SM00382	ATPases associated with a variety of cellular activities
AT395_RS06435	SM00316	Ribosomal protein S1-like RNA-binding domain
AT395_RS06450	SM00382	ATPases associated with a variety of cellular activities
AT395_RS06495	SM01209	AT395_RS06495
AT395_RS06495	SM01210	AT395_RS06495
AT395_RS06525	SM00851	MGS-like domain
AT395_RS06530	SM00829	Enoylreductase
AT395_RS06555	SM00382	ATPases associated with a variety of cellular activities
AT395_RS06565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS06565	SM00895	AT395_RS06565
AT395_RS06585	SM00822	AT395_RS06585
AT395_RS06625	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS06665	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS06710	SM00421	helix_turn_helix, Lux Regulon
AT395_RS06740	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS06745	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS06750	SM00822	AT395_RS06750
AT395_RS06790	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AT395_RS06800	SM01012	AT395_RS06800
AT395_RS06825	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS06855	SM00382	ATPases associated with a variety of cellular activities
AT395_RS06945	SM00382	ATPases associated with a variety of cellular activities
AT395_RS06950	SM00382	ATPases associated with a variety of cellular activities
AT395_RS06975	SM00465	GIY-YIG type nucleases (URI domain)
AT395_RS06975	SM00479	AT395_RS06975
AT395_RS06990	SM00267	diguanylate cyclase
AT395_RS07000	SM00895	AT395_RS07000
AT395_RS07025	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS07075	SM00448	cheY-homologous receiver domain
AT395_RS07075	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS07080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS07080	SM00387	Histidine kinase-like ATPases
AT395_RS07080	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS07110	SM00883	Chaperonin 10 Kd subunit
AT395_RS07130	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AT395_RS07155	SM00422	helix_turn_helix, mercury resistance
AT395_RS07160	SM00947	Carbonic anhydrase
AT395_RS07165	SM00883	Chaperonin 10 Kd subunit
AT395_RS07185	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS07275	SM01001	AIR carboxylase
AT395_RS07300	SM00448	cheY-homologous receiver domain
AT395_RS07300	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS07305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS07305	SM00387	Histidine kinase-like ATPases
AT395_RS07305	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS07315	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT395_RS07355	SM00382	ATPases associated with a variety of cellular activities
AT395_RS07435	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS07460	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS07465	SM00903	Flavin reductase like domain
AT395_RS07495	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS07495	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AT395_RS07505	SM00382	ATPases associated with a variety of cellular activities
AT395_RS07610	SM00344	helix_turn_helix ASNC type
AT395_RS07660	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS07670	SM00382	ATPases associated with a variety of cellular activities
AT395_RS07685	SM01007	Class II Aldolase and Adducin N-terminal domain
AT395_RS07705	SM00450	Rhodanese Homology Domain
AT395_RS07725	SM00382	ATPases associated with a variety of cellular activities
AT395_RS07730	SM00382	ATPases associated with a variety of cellular activities
AT395_RS07755	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS07765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS07765	SM00895	AT395_RS07765
AT395_RS07785	SM01119	AT395_RS07785
AT395_RS07805	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS07870	SM00382	ATPases associated with a variety of cellular activities
AT395_RS07905	SM00344	helix_turn_helix ASNC type
AT395_RS08000	SM00267	diguanylate cyclase
AT395_RS08005	SM00344	helix_turn_helix ASNC type
AT395_RS08075	SM00460	Transglutaminase/protease-like homologues
AT395_RS08105	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS08145	SM00829	Enoylreductase
AT395_RS08160	SM00869	Autotransporter beta-domain
AT395_RS08165	SM00869	Autotransporter beta-domain
AT395_RS08200	SM00054	EF-hand, calcium binding motif
AT395_RS08230	SM00382	ATPases associated with a variety of cellular activities
AT395_RS08235	SM00382	ATPases associated with a variety of cellular activities
AT395_RS08285	SM00354	helix_turn _helix lactose operon repressor
AT395_RS08305	SM00382	ATPases associated with a variety of cellular activities
AT395_RS08320	SM00248	ankyrin repeats
AT395_RS08425	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AT395_RS08430	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AT395_RS08450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS08450	SM00895	AT395_RS08450
AT395_RS08485	SM00422	helix_turn_helix, mercury resistance
AT395_RS08535	SM00481	DNA polymerase alpha chain like domain
AT395_RS08550	SM00052	Putative diguanylate phosphodiesterase
AT395_RS08550	SM00267	diguanylate cyclase
AT395_RS08560	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS08580	SM00487	DEAD-like helicases superfamily
AT395_RS08580	SM00490	helicase superfamily c-terminal domain
AT395_RS08595	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS08660	SM00479	AT395_RS08660
AT395_RS08675	SM00849	Metallo-beta-lactamase superfamily
AT395_RS08680	SM00257	Lysin motif
AT395_RS08765	SM00822	AT395_RS08765
AT395_RS08775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS08775	SM00895	AT395_RS08775
AT395_RS08780	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AT395_RS08790	SM00851	MGS-like domain
AT395_RS08790	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AT395_RS08805	SM01103	AT395_RS08805
AT395_RS08815	SM00382	ATPases associated with a variety of cellular activities
AT395_RS08845	SM00382	ATPases associated with a variety of cellular activities
AT395_RS08855	SM00448	cheY-homologous receiver domain
AT395_RS08855	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS08860	SM00387	Histidine kinase-like ATPases
AT395_RS08860	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS08880	SM00855	Phosphoglycerate mutase family
AT395_RS08905	SM00912	haemagglutination activity domain
AT395_RS08910	SM00965	Secretin and TonB N terminus short domain
AT395_RS08925	SM00912	haemagglutination activity domain
AT395_RS08985	SM00380	DNA-binding domain in plant proteins such as APETALA2 and EREBPs
AT395_RS09175	SM00047	Lysozyme subfamily 2
AT395_RS09530	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS09555	SM00014	Acid phosphatase homologues
AT395_RS09580	SM00477	DNA/RNA non-specific endonuclease
AT395_RS09580	SM00892	DNA/RNA non-specific endonuclease
AT395_RS09630	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS09685	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
AT395_RS09730	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AT395_RS09730	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AT395_RS09740	SM00344	helix_turn_helix ASNC type
AT395_RS09745	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT395_RS09810	SM00479	AT395_RS09810
AT395_RS09815	SM00852	Probable molybdopterin binding domain
AT395_RS09845	SM00382	ATPases associated with a variety of cellular activities
AT395_RS09850	SM00382	ATPases associated with a variety of cellular activities
AT395_RS09855	SM00267	diguanylate cyclase
AT395_RS09960	SM00382	ATPases associated with a variety of cellular activities
AT395_RS09965	SM00387	Histidine kinase-like ATPases
AT395_RS09965	SM00433	TopoisomeraseII
AT395_RS09980	SM00434	DNA Topoisomerase IV
AT395_RS10025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS10030	SM00387	Histidine kinase-like ATPases
AT395_RS10040	SM00986	Uracil DNA glycosylase superfamily
AT395_RS10040	SM00987	UreE urease accessory protein, C-terminal domain 
AT395_RS10065	SM00382	ATPases associated with a variety of cellular activities
AT395_RS10095	SM00478	endonuclease III
AT395_RS10120	SM00487	DEAD-like helicases superfamily
AT395_RS10120	SM00490	helicase superfamily c-terminal domain
AT395_RS10125	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS10130	SM00226	Low molecular weight phosphatase family
AT395_RS10165	SM00271	DnaJ molecular chaperone homology domain
AT395_RS10225	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS10260	SM00382	ATPases associated with a variety of cellular activities
AT395_RS10270	SM00849	Metallo-beta-lactamase superfamily
AT395_RS10290	SM01192	AT395_RS10290
AT395_RS10290	SM01193	AT395_RS10290
AT395_RS10325	SM00481	DNA polymerase alpha chain like domain
AT395_RS10350	SM01130	AT395_RS10350
AT395_RS10360	SM00849	Metallo-beta-lactamase superfamily
AT395_RS10370	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AT395_RS10385	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AT395_RS10385	SM00534	ATPase domain of DNA mismatch repair MUTS family
AT395_RS10390	SM00267	diguanylate cyclase
AT395_RS10390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS10395	SM00421	helix_turn_helix, Lux Regulon
AT395_RS10400	SM00829	Enoylreductase
AT395_RS10445	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AT395_RS10450	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AT395_RS10530	SM00855	Phosphoglycerate mutase family
AT395_RS10575	SM00631	AT395_RS10575
AT395_RS10600	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS10600	SM00478	endonuclease III
AT395_RS10600	SM01009	AlkA N-terminal domain
AT395_RS10620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS10620	SM00866	AT395_RS10620
AT395_RS10670	SM01329	AT395_RS10670
AT395_RS10675	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AT395_RS10765	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS10785	SM00382	ATPases associated with a variety of cellular activities
AT395_RS10815	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS10835	SM00382	ATPases associated with a variety of cellular activities
AT395_RS10880	SM00028	Tetratricopeptide repeats
AT395_RS10885	SM00840	AT395_RS10885
AT395_RS10890	SM00478	endonuclease III
AT395_RS10915	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS10935	SM00382	ATPases associated with a variety of cellular activities
AT395_RS10980	SM00028	Tetratricopeptide repeats
AT395_RS10985	SM00840	AT395_RS10985
AT395_RS10990	SM00478	endonuclease III
AT395_RS11000	SM00977	TilS substrate C-terminal domain
AT395_RS11045	SM00382	ATPases associated with a variety of cellular activities
AT395_RS11070	SM00357	Cold shock protein domain
AT395_RS11070	SM00382	ATPases associated with a variety of cellular activities
AT395_RS11070	SM00959	Rho termination factor, N-terminal domain
AT395_RS11085	SM00382	ATPases associated with a variety of cellular activities
AT395_RS11095	SM00493	AT395_RS11095
AT395_RS11100	SM00382	ATPases associated with a variety of cellular activities
AT395_RS11150	SM00421	helix_turn_helix, Lux Regulon
AT395_RS11165	SM00382	ATPases associated with a variety of cellular activities
AT395_RS11185	SM00257	Lysin motif
AT395_RS11210	SM00562	AT395_RS11210
AT395_RS11240	SM00564	beta-propeller repeat
AT395_RS11260	SM00244	prohibitin homologues
AT395_RS11265	SM00244	prohibitin homologues
AT395_RS11280	SM00788	Adenylosuccinate synthetase
AT395_RS11305	SM00421	helix_turn_helix, Lux Regulon
AT395_RS11305	SM00448	cheY-homologous receiver domain
AT395_RS11310	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AT395_RS11310	SM00091	PAS domain
AT395_RS11310	SM00387	Histidine kinase-like ATPases
AT395_RS11310	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS11360	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS11385	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS11385	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AT395_RS11450	SM00849	Metallo-beta-lactamase superfamily
AT395_RS11465	SM00822	AT395_RS11465
AT395_RS11480	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS11485	SM00822	AT395_RS11485
AT395_RS11495	SM00357	Cold shock protein domain
AT395_RS11510	SM00267	diguanylate cyclase
AT395_RS11520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS11520	SM00895	AT395_RS11520
AT395_RS11550	SM00636	AT395_RS11550
AT395_RS11555	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS11570	SM00838	Elongation factor G C-terminus
AT395_RS11570	SM00889	Elongation factor G, domain IV
AT395_RS11575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS11575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS11635	SM00450	Rhodanese Homology Domain
AT395_RS11640	SM01230	AT395_RS11640
AT395_RS11645	SM00387	Histidine kinase-like ATPases
AT395_RS11645	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS11650	SM00382	ATPases associated with a variety of cellular activities
AT395_RS11650	SM00448	cheY-homologous receiver domain
AT395_RS11695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS11695	SM00895	AT395_RS11695
AT395_RS11710	SM00822	AT395_RS11710
AT395_RS11740	SM00382	ATPases associated with a variety of cellular activities
AT395_RS11755	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS11780	SM00316	Ribosomal protein S1-like RNA-binding domain
AT395_RS11780	SM00357	Cold shock protein domain
AT395_RS11780	SM00955	AT395_RS11780
AT395_RS11785	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AT395_RS11815	SM00382	ATPases associated with a variety of cellular activities
AT395_RS11815	SM00487	DEAD-like helicases superfamily
AT395_RS11815	SM00490	helicase superfamily c-terminal domain
AT395_RS11815	SM00847	Helicase associated domain (HA2)  Add an annotation
AT395_RS11835	SM00852	Probable molybdopterin binding domain
AT395_RS11840	SM00829	Enoylreductase
AT395_RS11855	SM00100	Cyclic nucleotide-monophosphate binding domain
AT395_RS11855	SM00419	helix_turn_helix, cAMP Regulatory protein
AT395_RS11865	SM00363	S4 RNA-binding domain
AT395_RS11875	SM00316	Ribosomal protein S1-like RNA-binding domain
AT395_RS11875	SM00322	K homology RNA-binding domain
AT395_RS11915	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS11920	SM00838	Elongation factor G C-terminus
AT395_RS11955	SM00382	ATPases associated with a variety of cellular activities
AT395_RS11965	SM00870	AT395_RS11965
AT395_RS12010	SM00382	ATPases associated with a variety of cellular activities
AT395_RS12035	SM00670	Large family of predicted nucleotide-binding domains
AT395_RS12100	SM00852	Probable molybdopterin binding domain
AT395_RS12120	SM00382	ATPases associated with a variety of cellular activities
AT395_RS12120	SM01086	C-terminal, D2-small domain, of ClpB protein
AT395_RS12135	SM00448	cheY-homologous receiver domain
AT395_RS12135	SM00850	LytTr DNA-binding domain
AT395_RS12140	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS12190	SM00487	DEAD-like helicases superfamily
AT395_RS12190	SM00490	helicase superfamily c-terminal domain
AT395_RS12205	SM00986	Uracil DNA glycosylase superfamily
AT395_RS12205	SM00987	UreE urease accessory protein, C-terminal domain 
AT395_RS12225	SM01005	Alanine racemase, C-terminal domain
AT395_RS12230	SM00382	ATPases associated with a variety of cellular activities
AT395_RS12235	SM00382	ATPases associated with a variety of cellular activities
AT395_RS12240	SM00155	Phospholipase D. Active site motifs.
AT395_RS12275	SM00968	SMC proteins Flexible Hinge Domain
AT395_RS12280	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AT395_RS12285	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AT395_RS12285	SM00292	breast cancer carboxy-terminal domain
AT395_RS12285	SM00532	Ligase N family
AT395_RS12295	SM00363	S4 RNA-binding domain
AT395_RS12300	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT395_RS12345	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT395_RS12355	SM00935	Outer membrane protein (OmpH-like)
AT395_RS12405	SM00244	prohibitin homologues
AT395_RS12430	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT395_RS12430	SM01240	AT395_RS12430
AT395_RS12460	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS12530	SM00464	Found in ATP-dependent protease La (LON)
AT395_RS12540	SM00382	ATPases associated with a variety of cellular activities
AT395_RS12545	SM00382	ATPases associated with a variety of cellular activities
AT395_RS12565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS12565	SM00895	AT395_RS12565
AT395_RS12620	SM00460	Transglutaminase/protease-like homologues
AT395_RS12660	SM00382	ATPases associated with a variety of cellular activities
AT395_RS12680	SM00382	ATPases associated with a variety of cellular activities
AT395_RS12705	SM00267	diguanylate cyclase
AT395_RS12710	SM00052	Putative diguanylate phosphodiesterase
AT395_RS12720	SM00422	helix_turn_helix, mercury resistance
AT395_RS12730	SM00880	AT395_RS12730
AT395_RS12735	SM00411	bacterial (prokaryotic) histone like domain
AT395_RS12845	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS12865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS12865	SM00387	Histidine kinase-like ATPases
AT395_RS12865	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS12870	SM00448	cheY-homologous receiver domain
AT395_RS12870	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS12905	SM00387	Histidine kinase-like ATPases
AT395_RS12905	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS12910	SM00448	cheY-homologous receiver domain
AT395_RS12910	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS12925	SM00487	DEAD-like helicases superfamily
AT395_RS12925	SM00490	helicase superfamily c-terminal domain
AT395_RS12980	SM00267	diguanylate cyclase
AT395_RS13020	SM00100	Cyclic nucleotide-monophosphate binding domain
AT395_RS13040	SM00226	Low molecular weight phosphatase family
AT395_RS13045	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT395_RS13095	SM00796	Allophanate hydrolase subunit 1
AT395_RS13095	SM00797	Allophanate hydrolase subunit 2
AT395_RS13095	SM00878	Biotin carboxylase C-terminal domain
AT395_RS13100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS13100	SM00895	AT395_RS13100
AT395_RS13145	SM00899	AT395_RS13145
AT395_RS13175	SM00382	ATPases associated with a variety of cellular activities
AT395_RS13180	SM00382	ATPases associated with a variety of cellular activities
AT395_RS13265	SM00749	bacterial OsmY and nodulation domain
AT395_RS13285	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AT395_RS13290	SM00829	Enoylreductase
AT395_RS13300	SM00091	PAS domain
AT395_RS13300	SM00387	Histidine kinase-like ATPases
AT395_RS13305	SM00829	Enoylreductase
AT395_RS13310	SM00100	Cyclic nucleotide-monophosphate binding domain
AT395_RS13310	SM00419	helix_turn_helix, cAMP Regulatory protein
AT395_RS13315	SM00421	helix_turn_helix, Lux Regulon
AT395_RS13315	SM00448	cheY-homologous receiver domain
AT395_RS13335	SM00267	diguanylate cyclase
AT395_RS13340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS13340	SM00895	AT395_RS13340
AT395_RS13375	SM01236	AT395_RS13375
AT395_RS13435	SM01350	AT395_RS13435
AT395_RS13440	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS13450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS13455	SM00267	diguanylate cyclase
AT395_RS13460	SM00382	ATPases associated with a variety of cellular activities
AT395_RS13480	SM00422	helix_turn_helix, mercury resistance
AT395_RS13490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS13525	SM00422	helix_turn_helix, mercury resistance
AT395_RS13540	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS13540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS13570	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS13595	SM01119	AT395_RS13595
AT395_RS13615	SM00382	ATPases associated with a variety of cellular activities
AT395_RS13640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS13640	SM00866	AT395_RS13640
AT395_RS13685	SM00382	ATPases associated with a variety of cellular activities
AT395_RS13730	SM01130	AT395_RS13730
AT395_RS13740	SM00382	ATPases associated with a variety of cellular activities
AT395_RS13785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS13785	SM00895	AT395_RS13785
AT395_RS13830	SM00421	helix_turn_helix, Lux Regulon
AT395_RS13830	SM00448	cheY-homologous receiver domain
AT395_RS13835	SM00387	Histidine kinase-like ATPases
AT395_RS13865	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS13865	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT395_RS13905	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS13920	SM00965	Secretin and TonB N terminus short domain
AT395_RS13930	SM00422	helix_turn_helix, mercury resistance
AT395_RS13940	SM00901	AT395_RS13940
AT395_RS13945	SM00091	PAS domain
AT395_RS13945	SM00267	diguanylate cyclase
AT395_RS13965	SM01130	AT395_RS13965
AT395_RS13970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS13970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS14010	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS14050	SM00014	Acid phosphatase homologues
AT395_RS14065	SM00822	AT395_RS14065
AT395_RS14120	SM00382	ATPases associated with a variety of cellular activities
AT395_RS14175	SM00028	Tetratricopeptide repeats
AT395_RS14280	SM00387	Histidine kinase-like ATPases
AT395_RS14280	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS14280	SM00448	cheY-homologous receiver domain
AT395_RS14285	SM00421	helix_turn_helix, Lux Regulon
AT395_RS14285	SM00448	cheY-homologous receiver domain
AT395_RS14305	SM00881	CoA binding domain
AT395_RS14320	SM00972	Spore Coat Protein U domain
AT395_RS14335	SM00972	Spore Coat Protein U domain
AT395_RS14350	SM00382	ATPases associated with a variety of cellular activities
AT395_RS14360	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS14360	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AT395_RS14370	SM00344	helix_turn_helix ASNC type
AT395_RS14385	SM00387	Histidine kinase-like ATPases
AT395_RS14385	SM00448	cheY-homologous receiver domain
AT395_RS14390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS14390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS14420	SM00248	ankyrin repeats
AT395_RS14460	SM00829	Enoylreductase
AT395_RS14480	SM00382	ATPases associated with a variety of cellular activities
AT395_RS14485	SM00382	ATPases associated with a variety of cellular activities
AT395_RS14535	SM01211	AT395_RS14535
AT395_RS14555	SM00382	ATPases associated with a variety of cellular activities
AT395_RS14580	SM00411	bacterial (prokaryotic) histone like domain
AT395_RS14585	SM00382	ATPases associated with a variety of cellular activities
AT395_RS14585	SM00464	Found in ATP-dependent protease La (LON)
AT395_RS14590	SM00382	ATPases associated with a variety of cellular activities
AT395_RS14590	SM00994	ClpX C4-type zinc finger
AT395_RS14590	SM01086	C-terminal, D2-small domain, of ClpB protein
AT395_RS14615	SM00822	AT395_RS14615
AT395_RS14695	SM00382	ATPases associated with a variety of cellular activities
AT395_RS14700	SM01209	AT395_RS14700
AT395_RS14705	SM01209	AT395_RS14705
AT395_RS14760	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT395_RS14795	SM00357	Cold shock protein domain
AT395_RS14875	SM00857	Resolvase, N terminal domain
AT395_RS14930	SM00448	cheY-homologous receiver domain
AT395_RS14930	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS14935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS14935	SM00387	Histidine kinase-like ATPases
AT395_RS14935	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS14960	SM00487	DEAD-like helicases superfamily
AT395_RS14960	SM00490	helicase superfamily c-terminal domain
AT395_RS14960	SM00982	AT395_RS14960
AT395_RS14960	SM01058	CarD-like/TRCF domain
AT395_RS14990	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS15015	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT395_RS15025	SM00822	AT395_RS15025
AT395_RS15045	SM00363	S4 RNA-binding domain
AT395_RS15060	SM00491	AT395_RS15060
AT395_RS15075	SM00316	Ribosomal protein S1-like RNA-binding domain
AT395_RS15075	SM00732	Likely ribonuclease with RNase H fold.
AT395_RS15090	SM00382	ATPases associated with a variety of cellular activities
AT395_RS15105	SM00028	Tetratricopeptide repeats
AT395_RS15135	SM00858	AT395_RS15135
AT395_RS15175	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS15220	SM00861	Transketolase, pyrimidine binding domain
AT395_RS15240	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS15240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS15295	SM00869	Autotransporter beta-domain
AT395_RS15320	SM00421	helix_turn_helix, Lux Regulon
AT395_RS15325	SM00267	diguanylate cyclase
AT395_RS15335	SM01034	Sensors of blue-light using FAD
AT395_RS15370	SM00382	ATPases associated with a variety of cellular activities
AT395_RS15375	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS15390	SM00903	Flavin reductase like domain
AT395_RS15395	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AT395_RS15395	SM00267	diguanylate cyclase
AT395_RS15445	SM00267	diguanylate cyclase
AT395_RS15450	SM00052	Putative diguanylate phosphodiesterase
AT395_RS15450	SM00267	diguanylate cyclase
AT395_RS15455	SM00422	helix_turn_helix, mercury resistance
AT395_RS15460	SM00411	bacterial (prokaryotic) histone like domain
AT395_RS15465	SM00873	B3/4 domain
AT395_RS15465	SM00874	tRNA synthetase B5 domain
AT395_RS15465	SM00896	Ferredoxin-fold anticodon binding domain
AT395_RS15490	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AT395_RS15500	SM00954	Region found in RelA / SpoT proteins
AT395_RS15520	SM00882	Coenzyme A transferase
AT395_RS15525	SM00882	Coenzyme A transferase
AT395_RS15530	SM00421	helix_turn_helix, Lux Regulon
AT395_RS15565	SM00563	Phosphate acyltransferases
AT395_RS15570	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT395_RS15620	SM00422	helix_turn_helix, mercury resistance
AT395_RS15660	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AT395_RS15685	SM00316	Ribosomal protein S1-like RNA-binding domain
AT395_RS15685	SM00322	K homology RNA-binding domain
AT395_RS15690	SM01387	AT395_RS15690
AT395_RS15705	SM00917	LeuA allosteric (dimerisation) domain
AT395_RS15710	SM00257	Lysin motif
AT395_RS15800	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AT395_RS15835	SM00448	cheY-homologous receiver domain
AT395_RS15835	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS15840	SM00387	Histidine kinase-like ATPases
AT395_RS15840	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS15865	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS15880	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS15915	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT395_RS15915	SM00954	Region found in RelA / SpoT proteins
AT395_RS15920	SM01409	AT395_RS15920
AT395_RS15925	SM00072	Guanylate kinase homologues.
AT395_RS15925	SM00382	ATPases associated with a variety of cellular activities
AT395_RS15945	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT395_RS16040	SM00382	ATPases associated with a variety of cellular activities
AT395_RS16040	SM01086	C-terminal, D2-small domain, of ClpB protein
AT395_RS16045	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS16050	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS16050	SM00448	cheY-homologous receiver domain
AT395_RS16055	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS16060	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS16065	SM00014	Acid phosphatase homologues
AT395_RS16140	SM00382	ATPases associated with a variety of cellular activities
AT395_RS16160	SM00382	ATPases associated with a variety of cellular activities
AT395_RS16170	SM00100	Cyclic nucleotide-monophosphate binding domain
AT395_RS16180	SM00267	diguanylate cyclase
AT395_RS16215	SM00382	ATPases associated with a variety of cellular activities
AT395_RS16235	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS16235	SM00871	Bacterial transcription activator, effector binding domain
AT395_RS16240	SM00450	Rhodanese Homology Domain
AT395_RS16265	SM01007	Class II Aldolase and Adducin N-terminal domain
AT395_RS16315	SM00382	ATPases associated with a variety of cellular activities
AT395_RS16355	SM00420	helix_turn_helix, Deoxyribose operon repressor
AT395_RS16355	SM01134	AT395_RS16355
AT395_RS16395	SM00091	PAS domain
AT395_RS16395	SM00382	ATPases associated with a variety of cellular activities
AT395_RS16445	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS16475	SM00052	Putative diguanylate phosphodiesterase
AT395_RS16495	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS16495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS16505	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS16505	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS16510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS16510	SM00895	AT395_RS16510
AT395_RS16515	SM00870	AT395_RS16515
AT395_RS16540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS16555	SM00400	zinc finger
AT395_RS16555	SM00493	AT395_RS16555
AT395_RS16580	SM00861	Transketolase, pyrimidine binding domain
AT395_RS16605	SM00450	Rhodanese Homology Domain
AT395_RS16625	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AT395_RS16625	SM00474	3'-5' exonuclease
AT395_RS16625	SM00475	5'-3' exonuclease
AT395_RS16625	SM00482	DNA polymerase A domain
AT395_RS16695	SM01007	Class II Aldolase and Adducin N-terminal domain
AT395_RS16705	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AT395_RS16750	SM00382	ATPases associated with a variety of cellular activities
AT395_RS16755	SM00382	ATPases associated with a variety of cellular activities
AT395_RS16775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS16775	SM00866	AT395_RS16775
AT395_RS16795	SM00849	Metallo-beta-lactamase superfamily
AT395_RS16955	SM00429	ig-like, plexins, transcription factors
AT395_RS16955	SM00869	Autotransporter beta-domain
AT395_RS16970	SM00903	Flavin reductase like domain
AT395_RS17010	SM00344	helix_turn_helix ASNC type
AT395_RS17015	SM00420	helix_turn_helix, Deoxyribose operon repressor
AT395_RS17015	SM01134	AT395_RS17015
AT395_RS17030	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS17055	SM00382	ATPases associated with a variety of cellular activities
AT395_RS17060	SM00382	ATPases associated with a variety of cellular activities
AT395_RS17085	SM00903	Flavin reductase like domain
AT395_RS17095	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS17105	SM00831	Cation transporter/ATPase, N-terminus
AT395_RS17135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS17135	SM00895	AT395_RS17135
AT395_RS17200	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AT395_RS17260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS17260	SM00895	AT395_RS17260
AT395_RS17265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS17265	SM00895	AT395_RS17265
AT395_RS17280	SM00248	ankyrin repeats
AT395_RS17300	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AT395_RS17300	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AT395_RS17330	SM00091	PAS domain
AT395_RS17360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS17360	SM00895	AT395_RS17360
AT395_RS17370	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AT395_RS17375	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AT395_RS17375	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AT395_RS17465	SM00382	ATPases associated with a variety of cellular activities
AT395_RS17505	SM00382	ATPases associated with a variety of cellular activities
AT395_RS17545	SM00822	AT395_RS17545
AT395_RS17550	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS17565	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS17580	SM00893	Electron transfer flavoprotein domain
AT395_RS17585	SM00893	Electron transfer flavoprotein domain
AT395_RS17605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS17605	SM00895	AT395_RS17605
AT395_RS17630	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS17640	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AT395_RS17660	SM00411	bacterial (prokaryotic) histone like domain
AT395_RS17665	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS17690	SM00822	AT395_RS17690
AT395_RS17730	SM00861	Transketolase, pyrimidine binding domain
AT395_RS17750	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT395_RS17830	SM00869	Autotransporter beta-domain
AT395_RS17835	SM00421	helix_turn_helix, Lux Regulon
AT395_RS17835	SM00448	cheY-homologous receiver domain
AT395_RS17840	SM00387	Histidine kinase-like ATPases
AT395_RS17850	SM00382	ATPases associated with a variety of cellular activities
AT395_RS17865	SM00912	haemagglutination activity domain
AT395_RS17880	SM00965	Secretin and TonB N terminus short domain
AT395_RS17890	SM00912	haemagglutination activity domain
AT395_RS17905	SM00965	Secretin and TonB N terminus short domain
AT395_RS17925	SM01007	Class II Aldolase and Adducin N-terminal domain
AT395_RS17960	SM00420	helix_turn_helix, Deoxyribose operon repressor
AT395_RS17960	SM01134	AT395_RS17960
AT395_RS17965	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS17970	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AT395_RS18010	SM00382	ATPases associated with a variety of cellular activities
AT395_RS18025	SM00869	Autotransporter beta-domain
AT395_RS18030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS18030	SM00895	AT395_RS18030
AT395_RS18040	SM01130	AT395_RS18040
AT395_RS18060	SM00382	ATPases associated with a variety of cellular activities
AT395_RS18140	SM00382	ATPases associated with a variety of cellular activities
AT395_RS18165	SM00895	AT395_RS18165
AT395_RS18170	SM00052	Putative diguanylate phosphodiesterase
AT395_RS18170	SM00267	diguanylate cyclase
AT395_RS18175	SM00869	Autotransporter beta-domain
AT395_RS18180	SM00052	Putative diguanylate phosphodiesterase
AT395_RS18185	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AT395_RS18185	SM00091	PAS domain
AT395_RS18185	SM00267	diguanylate cyclase
AT395_RS18195	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS18300	SM00822	AT395_RS18300
AT395_RS18345	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS18390	SM00822	AT395_RS18390
AT395_RS18410	SM00893	Electron transfer flavoprotein domain
AT395_RS18415	SM00893	Electron transfer flavoprotein domain
AT395_RS18490	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT395_RS18510	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS18525	SM00382	ATPases associated with a variety of cellular activities
AT395_RS18535	SM00843	AT395_RS18535
AT395_RS18545	SM00463	Small MutS-related domain
AT395_RS18555	SM00938	Nitrogen regulatory protein P-II
AT395_RS18590	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS18595	SM01130	AT395_RS18595
AT395_RS18605	SM00382	ATPases associated with a variety of cellular activities
AT395_RS18665	SM00830	Chorismate mutase type II
AT395_RS18710	SM00344	helix_turn_helix ASNC type
AT395_RS18790	SM00855	Phosphoglycerate mutase family
AT395_RS18810	SM00382	ATPases associated with a variety of cellular activities
AT395_RS18845	SM00893	Electron transfer flavoprotein domain
AT395_RS18850	SM00893	Electron transfer flavoprotein domain
AT395_RS18900	SM00984	UDP binding domain
AT395_RS18905	SM00028	Tetratricopeptide repeats
AT395_RS18915	SM00411	bacterial (prokaryotic) histone like domain
AT395_RS18920	SM00316	Ribosomal protein S1-like RNA-binding domain
AT395_RS18945	SM00830	Chorismate mutase type II
AT395_RS18960	SM00434	DNA Topoisomerase IV
AT395_RS19015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS19015	SM00895	AT395_RS19015
AT395_RS19155	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS19160	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS19180	SM00028	Tetratricopeptide repeats
AT395_RS19185	SM00869	Autotransporter beta-domain
AT395_RS19245	SM00822	AT395_RS19245
AT395_RS19250	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS19265	SM00822	AT395_RS19265
AT395_RS19275	SM00382	ATPases associated with a variety of cellular activities
AT395_RS19290	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS19305	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AT395_RS19315	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT395_RS19350	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS19380	SM01130	AT395_RS19380
AT395_RS19390	SM00831	Cation transporter/ATPase, N-terminus
AT395_RS19395	SM00014	Acid phosphatase homologues
AT395_RS19465	SM00382	ATPases associated with a variety of cellular activities
AT395_RS19470	SM00382	ATPases associated with a variety of cellular activities
AT395_RS19480	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AT395_RS19525	SM00052	Putative diguanylate phosphodiesterase
AT395_RS19525	SM00267	diguanylate cyclase
AT395_RS19540	SM00382	ATPases associated with a variety of cellular activities
AT395_RS19540	SM00930	AT395_RS19540
AT395_RS19545	SM00448	cheY-homologous receiver domain
AT395_RS19550	SM00421	helix_turn_helix, Lux Regulon
AT395_RS19550	SM00448	cheY-homologous receiver domain
AT395_RS19570	SM00387	Histidine kinase-like ATPases
AT395_RS19595	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS19630	SM00448	cheY-homologous receiver domain
AT395_RS19630	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS19635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS19635	SM00387	Histidine kinase-like ATPases
AT395_RS19635	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS19645	SM00382	ATPases associated with a variety of cellular activities
AT395_RS19815	SM00382	ATPases associated with a variety of cellular activities
AT395_RS19860	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS19880	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS19905	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS19920	SM00998	Adenylosuccinate lyase C-terminus
AT395_RS19975	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS19980	SM00448	cheY-homologous receiver domain
AT395_RS20000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS20000	SM00387	Histidine kinase-like ATPases
AT395_RS20040	SM00382	ATPases associated with a variety of cellular activities
AT395_RS20045	SM00382	ATPases associated with a variety of cellular activities
AT395_RS20085	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS20105	SM00382	ATPases associated with a variety of cellular activities
AT395_RS20155	SM00912	haemagglutination activity domain
AT395_RS20170	SM00965	Secretin and TonB N terminus short domain
AT395_RS20200	SM00560	LamG-like jellyroll fold domain
AT395_RS20220	SM00421	helix_turn_helix, Lux Regulon
AT395_RS20220	SM00448	cheY-homologous receiver domain
AT395_RS20255	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS20275	SM00382	ATPases associated with a variety of cellular activities
AT395_RS20285	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS20310	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AT395_RS20325	SM00382	ATPases associated with a variety of cellular activities
AT395_RS20595	SM01060	AT395_RS20595
AT395_RS20605	SM00487	DEAD-like helicases superfamily
AT395_RS20605	SM00490	helicase superfamily c-terminal domain
AT395_RS20620	SM01323	AT395_RS20620
AT395_RS20695	SM00382	ATPases associated with a variety of cellular activities
AT395_RS20710	SM00421	helix_turn_helix, Lux Regulon
AT395_RS20710	SM00448	cheY-homologous receiver domain
AT395_RS20775	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS20795	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AT395_RS20795	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AT395_RS20820	SM00981	AT395_RS20820
AT395_RS20870	SM00382	ATPases associated with a variety of cellular activities
AT395_RS20880	SM00855	Phosphoglycerate mutase family
AT395_RS20895	SM00363	S4 RNA-binding domain
AT395_RS20915	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AT395_RS20955	SM00382	ATPases associated with a variety of cellular activities
AT395_RS20970	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS20975	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AT395_RS20985	SM00382	ATPases associated with a variety of cellular activities
AT395_RS21020	SM00155	Phospholipase D. Active site motifs.
AT395_RS21040	SM00834	Putative regulatory protein
AT395_RS21065	SM00978	AT395_RS21065
AT395_RS21100	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AT395_RS21160	SM01119	AT395_RS21160
AT395_RS21165	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS21220	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS21225	SM00450	Rhodanese Homology Domain
AT395_RS21285	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
AT395_RS21310	SM00052	Putative diguanylate phosphodiesterase
AT395_RS21310	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AT395_RS21310	SM00091	PAS domain
AT395_RS21310	SM00267	diguanylate cyclase
AT395_RS21320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS21325	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS21330	SM00382	ATPases associated with a variety of cellular activities
AT395_RS21345	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AT395_RS21400	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS21405	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS21425	SM00052	Putative diguanylate phosphodiesterase
AT395_RS21445	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS21460	SM01329	AT395_RS21460
AT395_RS21470	SM01217	AT395_RS21470
AT395_RS21490	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS21505	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS21510	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS21515	SM00849	Metallo-beta-lactamase superfamily
AT395_RS21530	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS21535	SM00882	Coenzyme A transferase
AT395_RS21540	SM00882	Coenzyme A transferase
AT395_RS21550	SM00917	LeuA allosteric (dimerisation) domain
AT395_RS21555	SM00344	helix_turn_helix ASNC type
AT395_RS21605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS21605	SM00895	AT395_RS21605
AT395_RS21695	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS21700	SM00886	Stress responsive A/B Barrel Domain
AT395_RS21710	SM00382	ATPases associated with a variety of cellular activities
AT395_RS21745	SM00382	ATPases associated with a variety of cellular activities
AT395_RS21765	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS21785	SM00829	Enoylreductase
AT395_RS21815	SM00822	AT395_RS21815
AT395_RS21820	SM00382	ATPases associated with a variety of cellular activities
AT395_RS21825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS21825	SM00895	AT395_RS21825
AT395_RS21840	SM00422	helix_turn_helix, mercury resistance
AT395_RS21850	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AT395_RS21900	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
AT395_RS21910	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS21930	SM01007	Class II Aldolase and Adducin N-terminal domain
AT395_RS21975	SM01150	AT395_RS21975
AT395_RS21995	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS21995	SM00895	AT395_RS21995
AT395_RS22005	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AT395_RS22070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS22070	SM00895	AT395_RS22070
AT395_RS22080	SM00382	ATPases associated with a variety of cellular activities
AT395_RS22120	SM00072	Guanylate kinase homologues.
AT395_RS22130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS22130	SM00866	AT395_RS22130
AT395_RS22155	SM00382	ATPases associated with a variety of cellular activities
AT395_RS22160	SM00382	ATPases associated with a variety of cellular activities
AT395_RS22180	SM00382	ATPases associated with a variety of cellular activities
AT395_RS22185	SM00420	helix_turn_helix, Deoxyribose operon repressor
AT395_RS22185	SM01134	AT395_RS22185
AT395_RS22205	SM00116	Domain in cystathionine beta-synthase and other proteins.
AT395_RS22225	SM00382	ATPases associated with a variety of cellular activities
AT395_RS22260	SM00478	endonuclease III
AT395_RS22265	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AT395_RS22265	SM01232	AT395_RS22265
AT395_RS22270	SM00028	Tetratricopeptide repeats
AT395_RS22290	SM01400	AT395_RS22290
AT395_RS22320	SM00382	ATPases associated with a variety of cellular activities
AT395_RS22340	SM00382	ATPases associated with a variety of cellular activities
AT395_RS22340	SM00962	SRP54-type protein, GTPase domain
AT395_RS22340	SM00963	SRP54-type protein, helical bundle domain
AT395_RS22450	SM00421	helix_turn_helix, Lux Regulon
AT395_RS22455	SM00903	Flavin reductase like domain
AT395_RS22480	SM00788	Adenylosuccinate synthetase
AT395_RS22510	SM00506	Appr-1"-p processing enzyme
AT395_RS22530	SM00450	Rhodanese Homology Domain
AT395_RS22535	SM00855	Phosphoglycerate mutase family
AT395_RS22540	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AT395_RS22540	SM00245	tail specific protease
AT395_RS22585	SM00938	Nitrogen regulatory protein P-II
AT395_RS22600	SM00382	ATPases associated with a variety of cellular activities
AT395_RS22620	SM00382	ATPases associated with a variety of cellular activities
AT395_RS22620	SM00448	cheY-homologous receiver domain
AT395_RS22625	SM00387	Histidine kinase-like ATPases
AT395_RS22625	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS22635	SM00382	ATPases associated with a variety of cellular activities
AT395_RS22650	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS22660	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT395_RS22695	SM00936	Penicillin-binding protein 5, C-terminal domain 
AT395_RS22730	SM00382	ATPases associated with a variety of cellular activities
AT395_RS22785	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS22815	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS22835	SM00450	Rhodanese Homology Domain
AT395_RS22845	SM01018	B12 binding domain
AT395_RS22865	SM00836	DALR anticodon binding domain
AT395_RS22865	SM01016	Arginyl tRNA synthetase N terminal dom
AT395_RS22895	SM00849	Metallo-beta-lactamase superfamily
AT395_RS22900	SM00422	helix_turn_helix, mercury resistance
AT395_RS22920	SM00947	Carbonic anhydrase
AT395_RS22970	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT395_RS22970	SM00876	Biotin and Thiamin Synthesis associated domain
AT395_RS22975	SM00878	Biotin carboxylase C-terminal domain
AT395_RS22975	SM01209	AT395_RS22975
AT395_RS22985	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS23010	SM00267	diguanylate cyclase
AT395_RS23020	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS23025	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS23035	SM01322	AT395_RS23035
AT395_RS23070	SM00849	Metallo-beta-lactamase superfamily
AT395_RS23160	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AT395_RS23175	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS23210	SM00347	helix_turn_helix multiple antibiotic resistance protein
AT395_RS23320	SM01060	AT395_RS23320
AT395_RS23330	SM00387	Histidine kinase-like ATPases
AT395_RS23330	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS23335	SM00448	cheY-homologous receiver domain
AT395_RS23335	SM00862	Transcriptional regulatory protein, C terminal
AT395_RS23350	SM00382	ATPases associated with a variety of cellular activities
AT395_RS23410	SM00905	Dihydroneopterin aldolase
AT395_RS23430	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS23465	SM00796	Allophanate hydrolase subunit 1
AT395_RS23470	SM00797	Allophanate hydrolase subunit 2
AT395_RS23485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS23495	SM00342	helix_turn_helix, arabinose operon control protein
AT395_RS23525	SM00382	ATPases associated with a variety of cellular activities
AT395_RS23540	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS23555	SM00382	ATPases associated with a variety of cellular activities
AT395_RS23580	SM00988	UreE urease accessory protein, N-terminal domain
AT395_RS23600	SM00382	ATPases associated with a variety of cellular activities
AT395_RS23605	SM00382	ATPases associated with a variety of cellular activities
AT395_RS23640	SM00996	S-adenosyl-L-homocysteine hydrolase
AT395_RS23640	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AT395_RS23730	SM00382	ATPases associated with a variety of cellular activities
AT395_RS23735	SM00382	ATPases associated with a variety of cellular activities
AT395_RS23770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS23770	SM00895	AT395_RS23770
AT395_RS23825	SM00387	Histidine kinase-like ATPases
AT395_RS23830	SM00448	cheY-homologous receiver domain
AT395_RS23835	SM00382	ATPases associated with a variety of cellular activities
AT395_RS23835	SM01086	C-terminal, D2-small domain, of ClpB protein
AT395_RS23860	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AT395_RS23875	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AT395_RS23975	SM00845	GatB domain
AT395_RS24020	SM00671	Sel1-like repeats.
AT395_RS24050	SM00448	cheY-homologous receiver domain
AT395_RS24055	SM00091	PAS domain
AT395_RS24055	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS24055	SM00387	Histidine kinase-like ATPases
AT395_RS24055	SM00388	His Kinase A (phosphoacceptor) domain
AT395_RS24100	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AT395_RS24100	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AT395_RS24100	SM00493	AT395_RS24100
AT395_RS24110	SM00729	Elongator protein 3, MiaB family, Radical SAM
AT395_RS24125	SM00387	Histidine kinase-like ATPases
AT395_RS24125	SM01049	AT395_RS24125
AT395_RS24130	SM00421	helix_turn_helix, Lux Regulon
AT395_RS24130	SM00448	cheY-homologous receiver domain
AT395_RS24170	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AT395_RS24180	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS24185	SM01043	Bacterial transcriptional activator domain
AT395_RS24200	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS24200	SM00895	AT395_RS24200
AT395_RS24220	SM00382	ATPases associated with a variety of cellular activities
AT395_RS24225	SM00382	ATPases associated with a variety of cellular activities
AT395_RS24270	SM00267	diguanylate cyclase
AT395_RS24270	SM00448	cheY-homologous receiver domain
AT395_RS24275	SM00448	cheY-homologous receiver domain
AT395_RS24280	SM00073	Histidine Phosphotransfer domain
AT395_RS24280	SM00260	Two component signalling adaptor domain
AT395_RS24280	SM00387	Histidine kinase-like ATPases
AT395_RS24280	SM00448	cheY-homologous receiver domain
AT395_RS24285	SM00260	Two component signalling adaptor domain
AT395_RS24290	SM00028	Tetratricopeptide repeats
AT395_RS24290	SM00138	Methyltransferase, chemotaxis proteins 
AT395_RS24295	SM00260	Two component signalling adaptor domain
AT395_RS24300	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS24300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS24330	SM00052	Putative diguanylate phosphodiesterase
AT395_RS24475	SM00382	ATPases associated with a variety of cellular activities
AT395_RS24490	SM00965	Secretin and TonB N terminus short domain
AT395_RS24540	SM00450	Rhodanese Homology Domain
AT395_RS24550	SM00382	ATPases associated with a variety of cellular activities
AT395_RS24565	SM00062	Bacterial periplasmic substrate-binding proteins
AT395_RS24615	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AT395_RS24615	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AT395_RS24655	SM00382	ATPases associated with a variety of cellular activities
AT395_RS24675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AT395_RS24675	SM00895	AT395_RS24675
AT395_RS24680	SM00903	Flavin reductase like domain
AT395_RS24695	SM00382	ATPases associated with a variety of cellular activities
AT395_RS24700	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AT395_RS24720	SM00903	Flavin reductase like domain
AT395_RS24725	SM00530	Helix-turn-helix XRE-family like proteins 
AT395_RS24740	SM00829	Enoylreductase
AT395_RS24755	SM00346	helix_turn_helix isocitrate lyase regulation
AT395_RS24785	SM00387	Histidine kinase-like ATPases
AT395_RS24785	SM00433	TopoisomeraseII
AT395_RS24790	SM00480	DNA polymerase III beta subunit
AT395_RS24795	SM00382	ATPases associated with a variety of cellular activities
AT395_RS24795	SM00760	Bacterial dnaA protein helix-turn-helix domain
