locus-tag class description NA29_RS00010 PF00392 Bacterial regulatory proteins, gntR family NA29_RS00010 PF07729 FCD domain NA29_RS00020 PF01565 FAD binding domain NA29_RS00025 PF02754 Cysteine-rich domain NA29_RS00025 PF13183 4Fe-4S dicluster domain NA29_RS00035 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS00040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00040 PF03466 LysR substrate binding domain NA29_RS00045 PF00571 CBS domain NA29_RS00045 PF03471 Transporter associated domain NA29_RS00045 PF01595 Cyclin M transmembrane N-terminal domain NA29_RS00055 PF07317 Flagellar regulator YcgR NA29_RS00055 PF07238 PilZ domain NA29_RS00060 PF01810 LysE type translocator NA29_RS00065 PF00313 'Cold-shock' DNA-binding domain NA29_RS00070 PF01476 LysM domain NA29_RS00070 PF01551 Peptidase family M23 NA29_RS00075 PF00535 Glycosyl transferase family 2 NA29_RS00080 PF04349 Periplasmic glucan biosynthesis protein, MdoG NA29_RS00085 PF01810 LysE type translocator NA29_RS00090 PF03466 LysR substrate binding domain NA29_RS00090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00095 PF02371 Transposase IS116/IS110/IS902 family NA29_RS00095 PF01548 Transposase NA29_RS00100 PF01554 MatE NA29_RS00110 PF07690 Major Facilitator Superfamily NA29_RS00115 PF01979 Amidohydrolase family NA29_RS00120 PF00474 Sodium:solute symporter family NA29_RS00125 PF11755 Protein of unknown function (DUF3311) NA29_RS00135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NA29_RS00140 PF07494 Two component regulator propeller NA29_RS00140 PF00072 Response regulator receiver domain NA29_RS00140 PF12833 Helix-turn-helix domain NA29_RS00140 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS00140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS00140 PF07495 Y_Y_Y domain NA29_RS00145 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS00145 PF00072 Response regulator receiver domain NA29_RS00145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS00145 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS00145 PF01627 Hpt domain NA29_RS00150 PF00083 Sugar (and other) transporter NA29_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00160 PF03466 LysR substrate binding domain NA29_RS00185 PF03601 Conserved hypothetical protein 698 NA29_RS00200 PF00691 OmpA family NA29_RS00205 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS00205 PF00563 EAL domain NA29_RS00205 PF03707 Bacterial signalling protein N terminal repeat NA29_RS00210 PF13689 YfiR/HmsC-like NA29_RS00215 PF03707 Bacterial signalling protein N terminal repeat NA29_RS00215 PF00563 EAL domain NA29_RS00215 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS00220 PF00107 Zinc-binding dehydrogenase NA29_RS00220 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS00225 PF01384 Phosphate transporter family NA29_RS00235 PF13520 Amino acid permease NA29_RS00250 PF02525 Flavodoxin-like fold NA29_RS00255 PF00999 Sodium/hydrogen exchanger family NA29_RS00255 PF02254 TrkA-N domain NA29_RS00285 PF01062 Bestrophin, RFP-TM, chloride channel NA29_RS00295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NA29_RS00295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NA29_RS00300 PF00171 Aldehyde dehydrogenase family NA29_RS00315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00315 PF03466 LysR substrate binding domain NA29_RS00320 PF07690 Major Facilitator Superfamily NA29_RS00325 PF00797 N-acetyltransferase NA29_RS00345 PF03466 LysR substrate binding domain NA29_RS00345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00350 PF02525 Flavodoxin-like fold NA29_RS00360 PF17831 Pyruvate dehydrogenase E1 component middle domain NA29_RS00360 PF00456 Transketolase, thiamine diphosphate binding domain NA29_RS00375 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS00375 PF00043 Glutathione S-transferase, C-terminal domain NA29_RS00380 PF00893 Small Multidrug Resistance protein NA29_RS00390 PF03797 Autotransporter beta-domain NA29_RS00390 PF03212 Pertactin NA29_RS00410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00410 PF03466 LysR substrate binding domain NA29_RS00440 PF07690 Major Facilitator Superfamily NA29_RS00465 PF02390 Putative methyltransferase NA29_RS00470 PF02673 Bacitracin resistance protein BacA NA29_RS00480 PF03692 Putative zinc- or iron-chelating domain NA29_RS00500 PF00899 ThiF family NA29_RS00500 PF00581 Rhodanese-like domain NA29_RS00505 PF02321 Outer membrane efflux protein NA29_RS00510 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NA29_RS00510 PF00534 Glycosyl transferases group 1 NA29_RS00520 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NA29_RS00525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NA29_RS00525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NA29_RS00525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NA29_RS00525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NA29_RS00535 PF00534 Glycosyl transferases group 1 NA29_RS00535 PF13439 Glycosyltransferase Family 4 NA29_RS00540 PF00534 Glycosyl transferases group 1 NA29_RS00540 PF13439 Glycosyltransferase Family 4 NA29_RS00545 PF00534 Glycosyl transferases group 1 NA29_RS00550 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NA29_RS00550 PF00953 Glycosyl transferase family 4 NA29_RS00555 PF00149 Calcineurin-like phosphoesterase NA29_RS00560 PF01553 Acyltransferase NA29_RS00565 PF01979 Amidohydrolase family NA29_RS00570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NA29_RS00570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NA29_RS00575 PF03652 Holliday junction resolvase NA29_RS00580 PF02622 Uncharacterized ACR, COG1678 NA29_RS00590 PF00301 Rubredoxin NA29_RS00595 PF08543 Phosphomethylpyrimidine kinase NA29_RS00605 PF07963 Prokaryotic N-terminal methylation motif NA29_RS00605 PF00114 Pilin (bacterial filament) NA29_RS00610 PF03741 Integral membrane protein TerC family NA29_RS00615 PF02629 CoA binding domain NA29_RS00615 PF00549 CoA-ligase NA29_RS00620 PF00549 CoA-ligase NA29_RS00620 PF08442 ATP-grasp domain NA29_RS00630 PF02631 RecX family NA29_RS00635 PF00154 recA bacterial DNA recombination protein NA29_RS00640 PF00072 Response regulator receiver domain NA29_RS00640 PF00486 Transcriptional regulatory protein, C terminal NA29_RS00645 PF08521 Two-component sensor kinase N-terminal NA29_RS00645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS00645 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS00650 PF07690 Major Facilitator Superfamily NA29_RS00650 PF00083 Sugar (and other) transporter NA29_RS00660 PF03466 LysR substrate binding domain NA29_RS00660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00665 PF14552 Tautomerase enzyme NA29_RS00675 PF03471 Transporter associated domain NA29_RS00675 PF03741 Integral membrane protein TerC family NA29_RS00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00680 PF03466 LysR substrate binding domain NA29_RS00685 PF01594 AI-2E family transporter NA29_RS00700 PF00005 ABC transporter NA29_RS00710 PF01370 NAD dependent epimerase/dehydratase family NA29_RS00715 PF00155 Aminotransferase class I and II NA29_RS00720 PF07883 Cupin domain NA29_RS00720 PF01381 Helix-turn-helix NA29_RS00725 PF02203 Tar ligand binding domain homologue NA29_RS00725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS00725 PF00672 HAMP domain NA29_RS00740 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NA29_RS00755 PF00924 Mechanosensitive ion channel NA29_RS00760 PF00005 ABC transporter NA29_RS00760 PF00571 CBS domain NA29_RS00765 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS00770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NA29_RS00775 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS00780 PF17158 Membrane-associated sensor, integral membrane domain NA29_RS00780 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS00785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NA29_RS00790 PF04293 SpoVR like protein NA29_RS00795 PF04285 Protein of unknown function (DUF444) NA29_RS00800 PF08298 PrkA AAA domain NA29_RS00800 PF06798 PrkA serine protein kinase C-terminal domain NA29_RS00805 PF00005 ABC transporter NA29_RS00810 PF00950 ABC 3 transport family NA29_RS00815 PF01297 Zinc-uptake complex component A periplasmic NA29_RS00820 PF01938 TRAM domain NA29_RS00820 PF04055 Radical SAM superfamily NA29_RS00820 PF00919 Uncharacterized protein family UPF0004 NA29_RS00825 PF02562 PhoH-like protein NA29_RS00830 PF02130 Uncharacterized protein family UPF0054 NA29_RS00835 PF04752 ChaC-like protein NA29_RS00840 PF00571 CBS domain NA29_RS00840 PF03471 Transporter associated domain NA29_RS00845 PF00795 Carbon-nitrogen hydrolase NA29_RS00850 PF02091 Glycyl-tRNA synthetase alpha subunit NA29_RS00855 PF05746 DALR anticodon binding domain NA29_RS00855 PF02092 Glycyl-tRNA synthetase beta subunit NA29_RS00865 PF01553 Acyltransferase NA29_RS00875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NA29_RS00880 PF00301 Rubredoxin NA29_RS00890 PF00398 Ribosomal RNA adenine dimethylase NA29_RS00895 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NA29_RS00900 PF09312 SurA N-terminal domain NA29_RS00900 PF00639 PPIC-type PPIASE domain NA29_RS00905 PF04453 LPS transport system D NA29_RS00910 PF01636 Phosphotransferase enzyme family NA29_RS00915 PF00483 Nucleotidyl transferase NA29_RS00920 PF00557 Metallopeptidase family M24 NA29_RS00920 PF05195 Aminopeptidase P, N-terminal domain NA29_RS00925 PF01494 FAD binding domain NA29_RS00930 PF01207 Dihydrouridine synthase (Dus) NA29_RS00935 PF02954 Bacterial regulatory protein, Fis family NA29_RS00940 PF02142 MGS-like domain NA29_RS00940 PF01808 AICARFT/IMPCHase bienzyme NA29_RS00945 PF13609 Gram-negative porin NA29_RS00955 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NA29_RS00960 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS00960 PF01799 [2Fe-2S] binding domain NA29_RS00975 PF00171 Aldehyde dehydrogenase family NA29_RS00990 PF09334 tRNA synthetases class I (M) NA29_RS00990 PF00133 tRNA synthetases class I (I, L, M and V) NA29_RS00990 PF13603 Leucyl-tRNA synthetase, Domain 2 NA29_RS00990 PF08264 Anticodon-binding domain of tRNA NA29_RS00995 PF01113 Dihydrodipicolinate reductase, N-terminus NA29_RS00995 PF05173 Dihydrodipicolinate reductase, C-terminus NA29_RS01000 PF04355 SmpA / OmlA family NA29_RS01005 PF01475 Ferric uptake regulator family NA29_RS01015 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NA29_RS01015 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NA29_RS01020 PF02779 Transketolase, pyrimidine binding domain NA29_RS01020 PF02780 Transketolase, C-terminal domain NA29_RS01020 PF00456 Transketolase, thiamine diphosphate binding domain NA29_RS01025 PF17284 Spermidine synthase tetramerisation domain NA29_RS01035 PF04452 RNA methyltransferase NA29_RS01050 PF00545 ribonuclease NA29_RS01055 PF00390 Malic enzyme, N-terminal domain NA29_RS01055 PF03949 Malic enzyme, NAD binding domain NA29_RS01055 PF01515 Phosphate acetyl/butaryl transferase NA29_RS01060 PF00586 AIR synthase related protein, N-terminal domain NA29_RS01060 PF02769 AIR synthase related protein, C-terminal domain NA29_RS01065 PF04608 Phosphatidylglycerophosphatase A NA29_RS01070 PF02464 Competence-damaged protein NA29_RS01075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NA29_RS01080 PF01544 CorA-like Mg2+ transporter protein NA29_RS01085 PF05552 Conserved TM helix NA29_RS01085 PF00924 Mechanosensitive ion channel NA29_RS01090 PF00912 Transglycosylase NA29_RS01095 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NA29_RS01095 PF01488 Shikimate / quinate 5-dehydrogenase NA29_RS01095 PF08501 Shikimate dehydrogenase substrate binding domain NA29_RS01110 PF00773 RNB domain NA29_RS01115 PF05728 Uncharacterised protein family (UPF0227) NA29_RS01120 PF02875 Mur ligase family, glutamate ligase domain NA29_RS01120 PF08245 Mur ligase middle domain NA29_RS01120 PF01225 Mur ligase family, catalytic domain NA29_RS01130 PF08534 Redoxin NA29_RS01135 PF01220 Dehydroquinase class II NA29_RS01140 PF00364 Biotin-requiring enzyme NA29_RS01145 PF02785 Biotin carboxylase C-terminal domain NA29_RS01145 PF00289 Biotin carboxylase, N-terminal domain NA29_RS01145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NA29_RS01165 PF08534 Redoxin NA29_RS01170 PF00294 pfkB family carbohydrate kinase NA29_RS01170 PF01467 Cytidylyltransferase-like NA29_RS01185 PF00268 Ribonucleotide reductase, small chain NA29_RS01195 PF03477 ATP cone domain NA29_RS01195 PF00317 Ribonucleotide reductase, all-alpha domain NA29_RS01195 PF02867 Ribonucleotide reductase, barrel domain NA29_RS01200 PF01510 N-acetylmuramoyl-L-alanine amidase NA29_RS01215 PF01578 Cytochrome C assembly protein NA29_RS01220 PF02978 Signal peptide binding domain NA29_RS01220 PF00448 SRP54-type protein, GTPase domain NA29_RS01220 PF02881 SRP54-type protein, helical bundle domain NA29_RS01225 PF00156 Phosphoribosyl transferase domain NA29_RS01230 PF01914 MarC family integral membrane protein NA29_RS01235 PF03129 Anticodon binding domain NA29_RS01235 PF04073 Aminoacyl-tRNA editing domain NA29_RS01235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NA29_RS01240 PF00293 NUDIX domain NA29_RS01250 PF01472 PUA domain NA29_RS01250 PF00696 Amino acid kinase family NA29_RS01255 PF01018 GTP1/OBG NA29_RS01255 PF01926 50S ribosome-binding GTPase NA29_RS01260 PF01016 Ribosomal L27 protein NA29_RS01265 PF00829 Ribosomal prokaryotic L21 protein NA29_RS01270 PF00348 Polyprenyl synthetase NA29_RS01280 PF00571 CBS domain NA29_RS01280 PF03471 Transporter associated domain NA29_RS01280 PF01595 Cyclin M transmembrane N-terminal domain NA29_RS01285 PF00437 Type II/IV secretion system protein NA29_RS01285 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NA29_RS01290 PF00482 Type II secretion system (T2SS), protein F NA29_RS01295 PF01478 Type IV leader peptidase family NA29_RS01295 PF06750 Bacterial Peptidase A24 N-terminal domain NA29_RS01300 PF01121 Dephospho-CoA kinase NA29_RS01305 PF07072 Cell division protein NA29_RS01310 PF03884 DNA gyrase inhibitor YacG NA29_RS01315 PF00293 NUDIX domain NA29_RS01325 PF01960 ArgJ family NA29_RS01330 PF02810 SEC-C motif NA29_RS01330 PF07516 SecA Wing and Scaffold domain NA29_RS01330 PF01043 SecA preprotein cross-linking domain NA29_RS01330 PF07517 SecA DEAD-like domain NA29_RS01340 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NA29_RS01345 PF00091 Tubulin/FtsZ family, GTPase domain NA29_RS01345 PF12327 FtsZ family, C-terminal domain NA29_RS01350 PF02491 SHS2 domain inserted in FTSA NA29_RS01355 PF08478 POTRA domain, FtsQ-type NA29_RS01355 PF03799 Cell division protein FtsQ NA29_RS01360 PF07478 D-ala D-ala ligase C-terminus NA29_RS01360 PF01820 D-ala D-ala ligase N-terminus NA29_RS01365 PF02875 Mur ligase family, glutamate ligase domain NA29_RS01365 PF08245 Mur ligase middle domain NA29_RS01365 PF01225 Mur ligase family, catalytic domain NA29_RS01370 PF04101 Glycosyltransferase family 28 C-terminal domain NA29_RS01370 PF03033 Glycosyltransferase family 28 N-terminal domain NA29_RS01375 PF01098 Cell cycle protein NA29_RS01380 PF08245 Mur ligase middle domain NA29_RS01380 PF02875 Mur ligase family, glutamate ligase domain NA29_RS01385 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NA29_RS01385 PF00953 Glycosyl transferase family 4 NA29_RS01390 PF08245 Mur ligase middle domain NA29_RS01390 PF02875 Mur ligase family, glutamate ligase domain NA29_RS01390 PF01225 Mur ligase family, catalytic domain NA29_RS01395 PF08245 Mur ligase middle domain NA29_RS01395 PF02875 Mur ligase family, glutamate ligase domain NA29_RS01400 PF00905 Penicillin binding protein transpeptidase domain NA29_RS01400 PF03717 Penicillin-binding Protein dimerisation domain NA29_RS01405 PF04999 Cell division protein FtsL NA29_RS01410 PF01795 MraW methylase family NA29_RS01415 PF02381 MraZ protein, putative antitoxin-like NA29_RS01420 PF03232 Ubiquinone biosynthesis protein COQ7 NA29_RS01425 PF13609 Gram-negative porin NA29_RS01440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS01440 PF01568 Molydopterin dinucleotide binding domain NA29_RS01440 PF00384 Molybdopterin oxidoreductase NA29_RS01445 PF01546 Peptidase family M20/M25/M40 NA29_RS01445 PF07687 Peptidase dimerisation domain NA29_RS01480 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS01485 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS01495 PF02803 Thiolase, C-terminal domain NA29_RS01495 PF00108 Thiolase, N-terminal domain NA29_RS01500 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS01505 PF03061 Thioesterase superfamily NA29_RS01510 PF00501 AMP-binding enzyme NA29_RS01510 PF14535 AMP-binding enzyme C-terminal domain NA29_RS01515 PF06725 3D domain NA29_RS01515 PF03562 MltA specific insert domain NA29_RS01525 PF04379 ApaG domain NA29_RS01530 PF00834 Ribulose-phosphate 3 epimerase family NA29_RS01535 PF13419 Haloacid dehalogenase-like hydrolase NA29_RS01540 PF00425 chorismate binding enzyme NA29_RS01540 PF04715 Anthranilate synthase component I, N terminal region NA29_RS01545 PF02321 Outer membrane efflux protein NA29_RS01550 PF13533 Biotin-lipoyl like NA29_RS01555 PF00005 ABC transporter NA29_RS01565 PF11339 Protein of unknown function (DUF3141) NA29_RS01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS01570 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS01570 PF08521 Two-component sensor kinase N-terminal NA29_RS01575 PF00072 Response regulator receiver domain NA29_RS01575 PF00486 Transcriptional regulatory protein, C terminal NA29_RS01580 PF02683 Cytochrome C biogenesis protein transmembrane region NA29_RS01580 PF11412 Disulphide bond corrector protein DsbC NA29_RS01585 PF00578 AhpC/TSA family NA29_RS01590 PF00117 Glutamine amidotransferase class-I NA29_RS01595 PF00591 Glycosyl transferase family, a/b domain NA29_RS01595 PF02885 Glycosyl transferase family, helical bundle domain NA29_RS01600 PF00218 Indole-3-glycerol phosphate synthase NA29_RS01610 PF03167 Uracil DNA glycosylase superfamily NA29_RS01615 PF00593 TonB dependent receptor NA29_RS01615 PF07715 TonB-dependent Receptor Plug Domain NA29_RS01635 PF02525 Flavodoxin-like fold NA29_RS01640 PF03466 LysR substrate binding domain NA29_RS01640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS01650 PF10411 Disulfide bond isomerase protein N-terminus NA29_RS01650 PF13098 Thioredoxin-like domain NA29_RS01655 PF01494 FAD binding domain NA29_RS01660 PF04228 Putative neutral zinc metallopeptidase NA29_RS01665 PF06071 Protein of unknown function (DUF933) NA29_RS01665 PF01926 50S ribosome-binding GTPase NA29_RS01675 PF00392 Bacterial regulatory proteins, gntR family NA29_RS01675 PF07729 FCD domain NA29_RS01690 PF00535 Glycosyl transferase family 2 NA29_RS01695 PF01804 Penicillin amidase NA29_RS01700 PF07690 Major Facilitator Superfamily NA29_RS01705 PF04226 Transglycosylase associated protein NA29_RS01710 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NA29_RS01710 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NA29_RS01710 PF01488 Shikimate / quinate 5-dehydrogenase NA29_RS01715 PF00472 RF-1 domain NA29_RS01715 PF03462 PCRF domain NA29_RS01720 PF05175 Methyltransferase small domain NA29_RS01720 PF17827 PrmC N-terminal domain NA29_RS01725 PF00462 Glutaredoxin NA29_RS01730 PF02441 Flavoprotein NA29_RS01755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS01755 PF13426 PAS domain NA29_RS01755 PF08447 PAS fold NA29_RS01760 PF03705 CheR methyltransferase, all-alpha domain NA29_RS01760 PF01739 CheR methyltransferase, SAM binding domain NA29_RS01765 PF03975 CheD chemotactic sensory transduction NA29_RS01770 PF01584 CheW-like domain NA29_RS01785 PF00005 ABC transporter NA29_RS01785 PF12848 ABC transporter NA29_RS01800 PF00149 Calcineurin-like phosphoesterase NA29_RS01805 PF00708 Acylphosphatase NA29_RS01815 PF01176 Translation initiation factor 1A / IF-1 NA29_RS01825 PF00083 Sugar (and other) transporter NA29_RS01835 PF02397 Bacterial sugar transferase NA29_RS01840 PF03808 Glycosyl transferase WecB/TagA/CpsF family NA29_RS01845 PF00732 GMC oxidoreductase NA29_RS01845 PF05199 GMC oxidoreductase NA29_RS01860 PF00942 Cellulose binding domain NA29_RS01860 PF12891 Glycoside hydrolase family 44 NA29_RS01860 PF00150 Cellulase (glycosyl hydrolase family 5) NA29_RS01925 PF05981 CreA protein NA29_RS01930 PF01590 GAF domain NA29_RS01930 PF02954 Bacterial regulatory protein, Fis family NA29_RS01930 PF00158 Sigma-54 interaction domain NA29_RS01935 PF00171 Aldehyde dehydrogenase family NA29_RS01940 PF00465 Iron-containing alcohol dehydrogenase NA29_RS01950 PF07690 Major Facilitator Superfamily NA29_RS01960 PF07690 Major Facilitator Superfamily NA29_RS01965 PF01418 Helix-turn-helix domain, rpiR family NA29_RS01965 PF01380 SIS domain NA29_RS01975 PF07687 Peptidase dimerisation domain NA29_RS01975 PF01546 Peptidase family M20/M25/M40 NA29_RS01980 PF07690 Major Facilitator Superfamily NA29_RS01985 PF03466 LysR substrate binding domain NA29_RS01985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS02025 PF05860 haemagglutination activity domain NA29_RS02025 PF13332 Hemagglutinin repeat NA29_RS02030 PF09312 SurA N-terminal domain NA29_RS02030 PF00639 PPIC-type PPIASE domain NA29_RS02035 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NA29_RS02035 PF08479 POTRA domain, ShlB-type NA29_RS02035 PF17287 POTRA domain NA29_RS02040 PF05860 haemagglutination activity domain NA29_RS02040 PF15526 Novel toxin 21 NA29_RS02040 PF04829 Pre-toxin domain with VENN motif NA29_RS02040 PF05594 Haemagluttinin repeat NA29_RS02040 PF13332 Hemagglutinin repeat NA29_RS02185 PF00589 Phage integrase family NA29_RS02190 PF18755 Restriction Enzyme Adenine Methylase Associated NA29_RS02190 PF01555 DNA methylase NA29_RS02290 PF04386 Stringent starvation protein B NA29_RS02295 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS02295 PF00043 Glutathione S-transferase, C-terminal domain NA29_RS02300 PF02167 Cytochrome C1 family NA29_RS02305 PF00033 Cytochrome b/b6/petB NA29_RS02305 PF00032 Cytochrome b(C-terminal)/b6/petD NA29_RS02310 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NA29_RS02310 PF00355 Rieske [2Fe-2S] domain NA29_RS02315 PF01741 Large-conductance mechanosensitive channel, MscL NA29_RS02320 PF01784 NIF3 (NGG1p interacting factor 3) NA29_RS02325 PF13180 PDZ domain NA29_RS02325 PF17820 PDZ domain NA29_RS02330 PF00902 Sec-independent protein translocase protein (TatC) NA29_RS02335 PF02416 mttA/Hcf106 family NA29_RS02340 PF02416 mttA/Hcf106 family NA29_RS02355 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NA29_RS02360 PF01502 Phosphoribosyl-AMP cyclohydrolase NA29_RS02365 PF00977 Histidine biosynthesis protein NA29_RS02370 PF00977 Histidine biosynthesis protein NA29_RS02375 PF00117 Glutamine amidotransferase class-I NA29_RS02380 PF01914 MarC family integral membrane protein NA29_RS02385 PF00475 Imidazoleglycerol-phosphate dehydratase NA29_RS02390 PF00155 Aminotransferase class I and II NA29_RS02400 PF00815 Histidinol dehydrogenase NA29_RS02405 PF01634 ATP phosphoribosyltransferase NA29_RS02410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NA29_RS02420 PF01061 ABC-2 type transporter NA29_RS02425 PF00005 ABC transporter NA29_RS02445 PF02470 MlaD protein NA29_RS02450 PF02405 Permease MlaE NA29_RS02455 PF00005 ABC transporter NA29_RS02465 PF02581 Thiamine monophosphate synthase NA29_RS02470 PF05690 Thiazole biosynthesis protein ThiG NA29_RS02480 PF01266 FAD dependent oxidoreductase NA29_RS02485 PF06472 ABC transporter transmembrane region 2 NA29_RS02485 PF00005 ABC transporter NA29_RS02495 PF07690 Major Facilitator Superfamily NA29_RS02500 PF08450 SMP-30/Gluconolactonase/LRE-like region NA29_RS02505 PF01370 NAD dependent epimerase/dehydratase family NA29_RS02510 PF07690 Major Facilitator Superfamily NA29_RS02515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NA29_RS02515 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS02520 PF01493 GXGXG motif NA29_RS02520 PF01645 Conserved region in glutamate synthase NA29_RS02520 PF04898 Glutamate synthase central domain NA29_RS02520 PF00310 Glutamine amidotransferases class-II NA29_RS02530 PF03922 OmpW family NA29_RS02545 PF01966 HD domain NA29_RS02545 PF13286 Phosphohydrolase-associated domain NA29_RS02550 PF01761 3-dehydroquinate synthase NA29_RS02555 PF01202 Shikimate kinase NA29_RS02575 PF00905 Penicillin binding protein transpeptidase domain NA29_RS02575 PF00912 Transglycosylase NA29_RS02575 PF17092 Penicillin-binding protein OB-like domain NA29_RS02580 PF01491 Frataxin-like domain NA29_RS02590 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NA29_RS02590 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NA29_RS02595 PF01794 Ferric reductase like transmembrane component NA29_RS02600 PF00174 Oxidoreductase molybdopterin binding domain NA29_RS02605 PF01578 Cytochrome C assembly protein NA29_RS02610 PF05140 ResB-like family NA29_RS02615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS02620 PF01926 50S ribosome-binding GTPase NA29_RS02625 PF00490 Delta-aminolevulinic acid dehydratase NA29_RS02630 PF11412 Disulphide bond corrector protein DsbC NA29_RS02630 PF02683 Cytochrome C biogenesis protein transmembrane region NA29_RS02635 PF03091 CutA1 divalent ion tolerance protein NA29_RS02640 PF01196 Ribosomal protein L17 NA29_RS02645 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NA29_RS02645 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NA29_RS02645 PF01000 RNA polymerase Rpb3/RpoA insert domain NA29_RS02650 PF01479 S4 domain NA29_RS02650 PF00163 Ribosomal protein S4/S9 N-terminal domain NA29_RS02655 PF00411 Ribosomal protein S11 NA29_RS02660 PF00416 Ribosomal protein S13/S18 NA29_RS02665 PF00444 Ribosomal protein L36 NA29_RS02670 PF01176 Translation initiation factor 1A / IF-1 NA29_RS02675 PF00344 SecY translocase NA29_RS02680 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NA29_RS02685 PF00327 Ribosomal protein L30p/L7e NA29_RS02690 PF00333 Ribosomal protein S5, N-terminal domain NA29_RS02690 PF03719 Ribosomal protein S5, C-terminal domain NA29_RS02695 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NA29_RS02700 PF00347 Ribosomal protein L6 NA29_RS02705 PF00410 Ribosomal protein S8 NA29_RS02710 PF00253 Ribosomal protein S14p/S29e NA29_RS02715 PF00673 ribosomal L5P family C-terminus NA29_RS02715 PF00281 Ribosomal protein L5 NA29_RS02720 PF00467 KOW motif NA29_RS02720 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NA29_RS02725 PF00238 Ribosomal protein L14p/L23e NA29_RS02730 PF00366 Ribosomal protein S17 NA29_RS02735 PF00831 Ribosomal L29 protein NA29_RS02740 PF00252 Ribosomal protein L16p/L10e NA29_RS02745 PF07650 KH domain NA29_RS02745 PF00189 Ribosomal protein S3, C-terminal domain NA29_RS02750 PF00237 Ribosomal protein L22p/L17e NA29_RS02755 PF00203 Ribosomal protein S19 NA29_RS02760 PF00181 Ribosomal Proteins L2, RNA binding domain NA29_RS02760 PF03947 Ribosomal Proteins L2, C-terminal domain NA29_RS02765 PF00276 Ribosomal protein L23 NA29_RS02770 PF00573 Ribosomal protein L4/L1 family NA29_RS02775 PF00297 Ribosomal protein L3 NA29_RS02780 PF00338 Ribosomal protein S10p/S20e NA29_RS02785 PF03144 Elongation factor Tu domain 2 NA29_RS02785 PF03143 Elongation factor Tu C-terminal domain NA29_RS02785 PF00009 Elongation factor Tu GTP binding domain NA29_RS02790 PF03764 Elongation factor G, domain IV NA29_RS02790 PF00679 Elongation factor G C-terminus NA29_RS02790 PF14492 Elongation Factor G, domain II NA29_RS02790 PF03144 Elongation factor Tu domain 2 NA29_RS02790 PF00009 Elongation factor Tu GTP binding domain NA29_RS02795 PF00177 Ribosomal protein S7p/S5e NA29_RS02800 PF00164 Ribosomal protein S12/S23 NA29_RS02805 PF00392 Bacterial regulatory proteins, gntR family NA29_RS02805 PF00155 Aminotransferase class I and II NA29_RS02820 PF02311 AraC-like ligand binding domain NA29_RS02820 PF12833 Helix-turn-helix domain NA29_RS02825 PF03653 Uncharacterised protein family (UPF0093) NA29_RS02835 PF01738 Dienelactone hydrolase family NA29_RS02855 PF03466 LysR substrate binding domain NA29_RS02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS02860 PF00155 Aminotransferase class I and II NA29_RS02865 PF07690 Major Facilitator Superfamily NA29_RS02870 PF08546 Ketopantoate reductase PanE/ApbA C terminal NA29_RS02870 PF02558 Ketopantoate reductase PanE/ApbA NA29_RS02880 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS02885 PF00171 Aldehyde dehydrogenase family NA29_RS02890 PF03328 HpcH/HpaI aldolase/citrate lyase family NA29_RS02895 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS02900 PF07660 Secretin and TonB N terminus short domain NA29_RS02900 PF00593 TonB dependent receptor NA29_RS02900 PF07715 TonB-dependent Receptor Plug Domain NA29_RS02910 PF01050 Mannose-6-phosphate isomerase NA29_RS02910 PF00483 Nucleotidyl transferase NA29_RS02915 PF04998 RNA polymerase Rpb1, domain 5 NA29_RS02915 PF05000 RNA polymerase Rpb1, domain 4 NA29_RS02915 PF04997 RNA polymerase Rpb1, domain 1 NA29_RS02915 PF00623 RNA polymerase Rpb1, domain 2 NA29_RS02915 PF04983 RNA polymerase Rpb1, domain 3 NA29_RS02920 PF04561 RNA polymerase Rpb2, domain 2 NA29_RS02920 PF04563 RNA polymerase beta subunit NA29_RS02920 PF04565 RNA polymerase Rpb2, domain 3 NA29_RS02920 PF10385 RNA polymerase beta subunit external 1 domain NA29_RS02920 PF00562 RNA polymerase Rpb2, domain 6 NA29_RS02920 PF04560 RNA polymerase Rpb2, domain 7 NA29_RS02925 PF16320 Ribosomal protein L7/L12 dimerisation domain NA29_RS02925 PF00542 Ribosomal protein L7/L12 C-terminal domain NA29_RS02930 PF00466 Ribosomal protein L10 NA29_RS02935 PF00687 Ribosomal protein L1p/L10e family NA29_RS02940 PF03946 Ribosomal protein L11, N-terminal domain NA29_RS02940 PF00298 Ribosomal protein L11, RNA binding domain NA29_RS02945 PF00467 KOW motif NA29_RS02945 PF02357 Transcription termination factor nusG NA29_RS02950 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NA29_RS02960 PF03143 Elongation factor Tu C-terminal domain NA29_RS02960 PF03144 Elongation factor Tu domain 2 NA29_RS02960 PF00009 Elongation factor Tu GTP binding domain NA29_RS03010 PF13091 PLD-like domain NA29_RS03015 PF00593 TonB dependent receptor NA29_RS03015 PF07715 TonB-dependent Receptor Plug Domain NA29_RS03020 PF16220 Domain of unknown function (DUF4880) NA29_RS03020 PF04773 FecR protein NA29_RS03025 PF04542 Sigma-70 region 2 NA29_RS03025 PF08281 Sigma-70, region 4 NA29_RS03035 PF01965 DJ-1/PfpI family NA29_RS03045 PF00893 Small Multidrug Resistance protein NA29_RS03050 PF01965 DJ-1/PfpI family NA29_RS03055 PF05138 Phenylacetic acid catabolic protein NA29_RS03060 PF06243 Phenylacetic acid degradation B NA29_RS03065 PF05138 Phenylacetic acid catabolic protein NA29_RS03070 PF01883 Iron-sulfur cluster assembly protein NA29_RS03075 PF00175 Oxidoreductase NAD-binding domain NA29_RS03075 PF00970 Oxidoreductase FAD-binding domain NA29_RS03075 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS03085 PF00440 Bacterial regulatory proteins, tetR family NA29_RS03095 PF01037 Lrp/AsnC ligand binding domain NA29_RS03095 PF13404 AsnC-type helix-turn-helix domain NA29_RS03110 PF01515 Phosphate acetyl/butaryl transferase NA29_RS03110 PF03949 Malic enzyme, NAD binding domain NA29_RS03110 PF00390 Malic enzyme, N-terminal domain NA29_RS03115 PF07690 Major Facilitator Superfamily NA29_RS03120 PF00156 Phosphoribosyl transferase domain NA29_RS03125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NA29_RS03135 PF08241 Methyltransferase domain NA29_RS03145 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS03145 PF00101 Ribulose bisphosphate carboxylase, small chain NA29_RS03150 PF01758 Sodium Bile acid symporter family NA29_RS03155 PF00271 Helicase conserved C-terminal domain NA29_RS03155 PF00270 DEAD/DEAH box helicase NA29_RS03160 PF03466 LysR substrate binding domain NA29_RS03160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03165 PF00860 Permease family NA29_RS03175 PF03706 Lysylphosphatidylglycerol synthase TM region NA29_RS03175 PF09924 Uncharacterised conserved protein (DUF2156) NA29_RS03180 PF00144 Beta-lactamase NA29_RS03185 PF01541 GIY-YIG catalytic domain NA29_RS03230 PF05378 Hydantoinase/oxoprolinase N-terminal region NA29_RS03230 PF01968 Hydantoinase/oxoprolinase NA29_RS03235 PF07690 Major Facilitator Superfamily NA29_RS03240 PF07286 Protein of unknown function (DUF1445) NA29_RS03245 PF03466 LysR substrate binding domain NA29_RS03245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03255 PF00510 Cytochrome c oxidase subunit III NA29_RS03260 PF00510 Cytochrome c oxidase subunit III NA29_RS03265 PF00115 Cytochrome C and Quinol oxidase polypeptide I NA29_RS03270 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NA29_RS03275 PF02719 Polysaccharide biosynthesis protein NA29_RS03280 PF01050 Mannose-6-phosphate isomerase NA29_RS03280 PF00483 Nucleotidyl transferase NA29_RS03285 PF01370 NAD dependent epimerase/dehydratase family NA29_RS03290 PF16363 GDP-mannose 4,6 dehydratase NA29_RS03315 PF13580 SIS domain NA29_RS03330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NA29_RS03335 PF02397 Bacterial sugar transferase NA29_RS03350 PF02872 5'-nucleotidase, C-terminal domain NA29_RS03350 PF00149 Calcineurin-like phosphoesterase NA29_RS03380 PF00034 Cytochrome c NA29_RS03390 PF00174 Oxidoreductase molybdopterin binding domain NA29_RS03400 PF08479 POTRA domain, ShlB-type NA29_RS03400 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NA29_RS03405 PF10518 TAT (twin-arginine translocation) pathway signal sequence NA29_RS03405 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS03405 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding NA29_RS03415 PF04972 BON domain NA29_RS03420 PF13580 SIS domain NA29_RS03425 PF02021 Uncharacterised protein family UPF0102 NA29_RS03430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NA29_RS03435 PF00005 ABC transporter NA29_RS03450 PF03330 Lytic transglycolase NA29_RS03450 PF05036 Sporulation related domain NA29_RS03455 PF00753 Metallo-beta-lactamase superfamily NA29_RS03465 PF03960 ArsC family NA29_RS03470 PF01738 Dienelactone hydrolase family NA29_RS03480 PF01261 Xylose isomerase-like TIM barrel NA29_RS03485 PF13380 CoA binding domain NA29_RS03490 PF07859 alpha/beta hydrolase fold NA29_RS03495 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS03500 PF01208 Uroporphyrinogen decarboxylase (URO-D) NA29_RS03505 PF00270 DEAD/DEAH box helicase NA29_RS03505 PF17764 3′ DNA-binding domain (3′BD) NA29_RS03505 PF18074 Primosomal protein N C-terminal domain NA29_RS03505 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NA29_RS03505 PF00271 Helicase conserved C-terminal domain NA29_RS03520 PF01619 Proline dehydrogenase NA29_RS03520 PF14850 DNA-binding domain of Proline dehydrogenase NA29_RS03520 PF00171 Aldehyde dehydrogenase family NA29_RS03520 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NA29_RS03525 PF00474 Sodium:solute symporter family NA29_RS03530 PF13458 Periplasmic binding protein NA29_RS03535 PF01235 Sodium:alanine symporter family NA29_RS03545 PF03313 Serine dehydratase alpha chain NA29_RS03545 PF03315 Serine dehydratase beta chain NA29_RS03550 PF02347 Glycine cleavage system P-protein NA29_RS03555 PF01597 Glycine cleavage H-protein NA29_RS03560 PF01571 Aminomethyltransferase folate-binding domain NA29_RS03560 PF08669 Glycine cleavage T-protein C-terminal barrel domain NA29_RS03570 PF00580 UvrD/REP helicase N-terminal domain NA29_RS03570 PF13361 UvrD-like helicase C-terminal domain NA29_RS03580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS03600 PF02107 Flagellar L-ring protein NA29_RS03605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS03605 PF00672 HAMP domain NA29_RS03605 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS03610 PF00072 Response regulator receiver domain NA29_RS03610 PF00486 Transcriptional regulatory protein, C terminal NA29_RS03625 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS03630 PF00005 ABC transporter NA29_RS03640 PF00486 Transcriptional regulatory protein, C terminal NA29_RS03640 PF00072 Response regulator receiver domain NA29_RS03645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS03645 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS03650 PF05231 MASE1 NA29_RS03650 PF07730 Histidine kinase NA29_RS03650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS03655 PF00196 Bacterial regulatory proteins, luxR family NA29_RS03655 PF00072 Response regulator receiver domain NA29_RS03660 PF00669 Bacterial flagellin N-terminal helical region NA29_RS03660 PF00700 Bacterial flagellin C-terminal helical region NA29_RS03665 PF07196 Flagellin hook IN motif NA29_RS03665 PF02465 Flagellar hook-associated protein 2 N-terminus NA29_RS03665 PF07195 Flagellar hook-associated protein 2 C-terminus NA29_RS03670 PF02561 Flagellar protein FliS NA29_RS03675 PF05400 Flagellar protein FliT NA29_RS03685 PF01312 FlhB HrpN YscU SpaS Family NA29_RS03695 PF02049 Flagellar hook-basal body complex protein FliE NA29_RS03700 PF01514 Secretory protein of YscJ/FliF family NA29_RS03700 PF08345 Flagellar M-ring protein C-terminal NA29_RS03705 PF14841 FliG middle domain NA29_RS03705 PF01706 FliG C-terminal domain NA29_RS03705 PF14842 FliG N-terminal domain NA29_RS03710 PF02108 Flagellar assembly protein FliH NA29_RS03715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NA29_RS03715 PF18269 T3SS EscN ATPase C-terminal domain NA29_RS03720 PF02050 Flagellar FliJ protein NA29_RS03725 PF02120 Flagellar hook-length control protein FliK NA29_RS03730 PF03748 Flagellar basal body-associated protein FliL NA29_RS03735 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NA29_RS03735 PF02154 Flagellar motor switch protein FliM NA29_RS03740 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NA29_RS03745 PF04347 Flagellar biosynthesis protein, FliO NA29_RS03750 PF00813 FliP family NA29_RS03755 PF01313 Bacterial export proteins, family 3 NA29_RS03760 PF01311 Bacterial export proteins, family 1 NA29_RS03765 PF00669 Bacterial flagellin N-terminal helical region NA29_RS03770 PF00460 Flagella basal body rod protein NA29_RS03770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NA29_RS03775 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NA29_RS03775 PF10135 Rod binding protein NA29_RS03780 PF02119 Flagellar P-ring protein NA29_RS03785 PF02107 Flagellar L-ring protein NA29_RS03790 PF00460 Flagella basal body rod protein NA29_RS03790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NA29_RS03795 PF00460 Flagella basal body rod protein NA29_RS03795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NA29_RS03800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NA29_RS03800 PF00460 Flagella basal body rod protein NA29_RS03800 PF07559 Flagellar basal body protein FlaE NA29_RS03805 PF03963 Flagellar hook capping protein - N-terminal region NA29_RS03805 PF13860 FlgD Ig-like domain NA29_RS03805 PF13861 FlgD Tudor-like domain NA29_RS03810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NA29_RS03810 PF00460 Flagella basal body rod protein NA29_RS03815 PF00460 Flagella basal body rod protein NA29_RS03825 PF04316 Anti-sigma-28 factor, FlgM NA29_RS03845 PF04055 Radical SAM superfamily NA29_RS03845 PF13186 Iron-sulfur cluster-binding domain NA29_RS03850 PF04539 Sigma-70 region 3 NA29_RS03850 PF04545 Sigma-70, region 4 NA29_RS03850 PF04542 Sigma-70 region 2 NA29_RS03860 PF00448 SRP54-type protein, GTPase domain NA29_RS03865 PF00771 FHIPEP family NA29_RS03870 PF01312 FlhB HrpN YscU SpaS Family NA29_RS03875 PF04344 Chemotaxis phosphatase, CheZ NA29_RS03880 PF00072 Response regulator receiver domain NA29_RS03885 PF01339 CheB methylesterase NA29_RS03885 PF00072 Response regulator receiver domain NA29_RS03890 PF03975 CheD chemotactic sensory transduction NA29_RS03895 PF01739 CheR methyltransferase, SAM binding domain NA29_RS03895 PF03705 CheR methyltransferase, all-alpha domain NA29_RS03900 PF02203 Tar ligand binding domain homologue NA29_RS03900 PF00672 HAMP domain NA29_RS03900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS03905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS03905 PF02203 Tar ligand binding domain homologue NA29_RS03905 PF00672 HAMP domain NA29_RS03910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS03910 PF02203 Tar ligand binding domain homologue NA29_RS03910 PF00672 HAMP domain NA29_RS03915 PF01584 CheW-like domain NA29_RS03920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS03920 PF01627 Hpt domain NA29_RS03920 PF01584 CheW-like domain NA29_RS03920 PF09078 CheY binding NA29_RS03920 PF02895 Signal transducing histidine kinase, homodimeric domain NA29_RS03925 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS03925 PF00072 Response regulator receiver domain NA29_RS03925 PF01627 Hpt domain NA29_RS03925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS03930 PF13677 Membrane MotB of proton-channel complex MotA/MotB NA29_RS03930 PF00691 OmpA family NA29_RS03935 PF01618 MotA/TolQ/ExbB proton channel family NA29_RS03940 PF05280 Flagellar transcriptional activator (FlhC) NA29_RS03945 PF05247 Flagellar transcriptional activator (FlhD) NA29_RS03950 PF07690 Major Facilitator Superfamily NA29_RS03955 PF13193 AMP-binding enzyme C-terminal domain NA29_RS03955 PF00501 AMP-binding enzyme NA29_RS03960 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NA29_RS03960 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NA29_RS03965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NA29_RS03965 PF02874 ATP synthase alpha/beta family, beta-barrel domain NA29_RS03970 PF00231 ATP synthase NA29_RS03975 PF02874 ATP synthase alpha/beta family, beta-barrel domain NA29_RS03975 PF00306 ATP synthase alpha/beta chain, C terminal domain NA29_RS03975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NA29_RS03980 PF00213 ATP synthase delta (OSCP) subunit NA29_RS03985 PF00430 ATP synthase B/B' CF(0) NA29_RS03990 PF00137 ATP synthase subunit C NA29_RS03995 PF00119 ATP synthase A chain NA29_RS04005 PF03600 Citrate transporter NA29_RS04010 PF02195 ParB-like nuclease domain NA29_RS04010 PF17762 HTH domain found in ParB protein NA29_RS04015 PF13614 AAA domain NA29_RS04020 PF08212 Lipocalin-like domain NA29_RS04025 PF02527 rRNA small subunit methyltransferase G NA29_RS04030 PF01134 Glucose inhibited division protein A NA29_RS04030 PF13932 GidA associated domain NA29_RS04035 PF00005 ABC transporter NA29_RS04040 PF00005 ABC transporter NA29_RS04040 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS04050 PF01047 MarR family NA29_RS04060 PF01925 Sulfite exporter TauE/SafE NA29_RS04065 PF02653 Branched-chain amino acid transport system / permease component NA29_RS04065 PF11862 Domain of unknown function (DUF3382) NA29_RS04070 PF02653 Branched-chain amino acid transport system / permease component NA29_RS04080 PF00005 ABC transporter NA29_RS04085 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS04085 PF00005 ABC transporter NA29_RS04090 PF00732 GMC oxidoreductase NA29_RS04090 PF05199 GMC oxidoreductase NA29_RS04095 PF00171 Aldehyde dehydrogenase family NA29_RS04100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04100 PF03466 LysR substrate binding domain NA29_RS04105 PF10415 Fumarase C C-terminus NA29_RS04105 PF00206 Lyase NA29_RS04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04110 PF03466 LysR substrate binding domain NA29_RS04115 PF07690 Major Facilitator Superfamily NA29_RS04120 PF01979 Amidohydrolase family NA29_RS04130 PF00579 tRNA synthetases class I (W and Y) NA29_RS04140 PF01037 Lrp/AsnC ligand binding domain NA29_RS04145 PF07715 TonB-dependent Receptor Plug Domain NA29_RS04145 PF00593 TonB dependent receptor NA29_RS04150 PF05171 Haemin-degrading HemS.ChuX domain NA29_RS04155 PF01497 Periplasmic binding protein NA29_RS04165 PF01032 FecCD transport family NA29_RS04170 PF00005 ABC transporter NA29_RS04175 PF02423 Ornithine cyclodeaminase/mu-crystallin family NA29_RS04180 PF00912 Transglycosylase NA29_RS04180 PF00905 Penicillin binding protein transpeptidase domain NA29_RS04185 PF07947 YhhN family NA29_RS04200 PF01037 Lrp/AsnC ligand binding domain NA29_RS04205 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NA29_RS04210 PF01329 Pterin 4 alpha carbinolamine dehydratase NA29_RS04225 PF04107 Glutamate-cysteine ligase family 2(GCS2) NA29_RS04235 PF01266 FAD dependent oxidoreductase NA29_RS04235 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS04240 PF00654 Voltage gated chloride channel NA29_RS04245 PF01047 MarR family NA29_RS04255 PF07690 Major Facilitator Superfamily NA29_RS04260 PF00563 EAL domain NA29_RS04260 PF13188 PAS domain NA29_RS04260 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS04260 PF03707 Bacterial signalling protein N terminal repeat NA29_RS04295 PF12631 MnmE helical domain NA29_RS04295 PF01926 50S ribosome-binding GTPase NA29_RS04295 PF10396 GTP-binding protein TrmE N-terminus NA29_RS04300 PF02096 60Kd inner membrane protein NA29_RS04300 PF14849 YidC periplasmic domain NA29_RS04305 PF01809 Putative membrane protein insertion efficiency factor NA29_RS04310 PF00825 Ribonuclease P NA29_RS04315 PF00468 Ribosomal protein L34 NA29_RS04325 PF08299 Bacterial dnaA protein helix-turn-helix NA29_RS04325 PF11638 DnaA N-terminal domain NA29_RS04325 PF00308 Bacterial dnaA protein NA29_RS04330 PF02768 DNA polymerase III beta subunit, C-terminal domain NA29_RS04330 PF02767 DNA polymerase III beta subunit, central domain NA29_RS04330 PF00712 DNA polymerase III beta subunit, N-terminal domain NA29_RS04335 PF01751 Toprim domain NA29_RS04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS04335 PF18053 DNA gyrase B subunit insert domain NA29_RS04335 PF00986 DNA gyrase B subunit, carboxyl terminus NA29_RS04335 PF00204 DNA gyrase B NA29_RS04345 PF06508 Queuosine biosynthesis protein QueC NA29_RS04365 PF03600 Citrate transporter NA29_RS04375 PF03069 Acetamidase/Formamidase family NA29_RS04380 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NA29_RS04380 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NA29_RS04390 PF02954 Bacterial regulatory protein, Fis family NA29_RS04390 PF00158 Sigma-54 interaction domain NA29_RS04390 PF06506 Propionate catabolism activator NA29_RS04400 PF00083 Sugar (and other) transporter NA29_RS04415 PF02203 Tar ligand binding domain homologue NA29_RS04415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS04415 PF00672 HAMP domain NA29_RS04445 PF00005 ABC transporter NA29_RS04445 PF08402 TOBE domain NA29_RS04450 PF02583 Metal-sensitive transcriptional repressor NA29_RS04455 PF03824 High-affinity nickel-transport protein NA29_RS04465 PF03466 LysR substrate binding domain NA29_RS04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04470 PF04072 Leucine carboxyl methyltransferase NA29_RS04480 PF06441 Epoxide hydrolase N terminus NA29_RS04485 PF02566 OsmC-like protein NA29_RS04490 PF01047 MarR family NA29_RS04495 PF03466 LysR substrate binding domain NA29_RS04495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04505 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS04510 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS04515 PF00005 ABC transporter NA29_RS04530 PF01053 Cys/Met metabolism PLP-dependent enzyme NA29_RS04535 PF00144 Beta-lactamase NA29_RS04545 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS04550 PF17933 Tetracyclin repressor-like, C-terminal domain NA29_RS04550 PF00440 Bacterial regulatory proteins, tetR family NA29_RS04560 PF01266 FAD dependent oxidoreductase NA29_RS04570 PF07715 TonB-dependent Receptor Plug Domain NA29_RS04570 PF00593 TonB dependent receptor NA29_RS04585 PF00005 ABC transporter NA29_RS04585 PF17755 UvrA DNA-binding domain NA29_RS04585 PF17760 UvrA interaction domain NA29_RS04600 PF01053 Cys/Met metabolism PLP-dependent enzyme NA29_RS04605 PF02673 Bacitracin resistance protein BacA NA29_RS04610 PF03466 LysR substrate binding domain NA29_RS04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04615 PF00465 Iron-containing alcohol dehydrogenase NA29_RS04620 PF00083 Sugar (and other) transporter NA29_RS04660 PF00860 Permease family NA29_RS04665 PF03466 LysR substrate binding domain NA29_RS04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04670 PF01156 Inosine-uridine preferring nucleoside hydrolase NA29_RS04675 PF00267 Gram-negative porin NA29_RS04685 PF04286 Protein of unknown function (DUF445) NA29_RS04695 PF01274 Malate synthase NA29_RS04700 PF03575 Peptidase family S51 NA29_RS04725 PF03466 LysR substrate binding domain NA29_RS04725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04735 PF03466 LysR substrate binding domain NA29_RS04740 PF07690 Major Facilitator Superfamily NA29_RS04745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04745 PF03459 TOBE domain NA29_RS04750 PF00196 Bacterial regulatory proteins, luxR family NA29_RS04750 PF00563 EAL domain NA29_RS04755 PF07690 Major Facilitator Superfamily NA29_RS04765 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NA29_RS04780 PF00202 Aminotransferase class-III NA29_RS04785 PF05853 beta-keto acid cleavage enzyme NA29_RS04790 PF02743 Cache domain NA29_RS04790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS04790 PF00672 HAMP domain NA29_RS04800 PF01739 CheR methyltransferase, SAM binding domain NA29_RS04805 PF01584 CheW-like domain NA29_RS04810 PF01584 CheW-like domain NA29_RS04810 PF00072 Response regulator receiver domain NA29_RS04810 PF01627 Hpt domain NA29_RS04810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS04815 PF00072 Response regulator receiver domain NA29_RS04815 PF01339 CheB methylesterase NA29_RS04820 PF00360 Phytochrome region NA29_RS04820 PF00563 EAL domain NA29_RS04820 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS04820 PF01590 GAF domain NA29_RS04845 PF07687 Peptidase dimerisation domain NA29_RS04845 PF01546 Peptidase family M20/M25/M40 NA29_RS04850 PF08946 Osmosensory transporter coiled coil NA29_RS04850 PF00083 Sugar (and other) transporter NA29_RS04855 PF00108 Thiolase, N-terminal domain NA29_RS04855 PF02803 Thiolase, C-terminal domain NA29_RS04860 PF07171 MlrC C-terminus NA29_RS04860 PF07364 Metallopeptidase family M81 NA29_RS04865 PF07687 Peptidase dimerisation domain NA29_RS04865 PF01546 Peptidase family M20/M25/M40 NA29_RS04870 PF00005 ABC transporter NA29_RS04875 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS04875 PF00005 ABC transporter NA29_RS04885 PF02653 Branched-chain amino acid transport system / permease component NA29_RS04895 PF07729 FCD domain NA29_RS04895 PF00392 Bacterial regulatory proteins, gntR family NA29_RS04900 PF04371 Porphyromonas-type peptidyl-arginine deiminase NA29_RS04910 PF13191 AAA ATPase domain NA29_RS04910 PF00211 Adenylate and Guanylate cyclase catalytic domain NA29_RS04915 PF09084 NMT1/THI5 like NA29_RS04920 PF07715 TonB-dependent Receptor Plug Domain NA29_RS04920 PF00593 TonB dependent receptor NA29_RS04925 PF18331 PKHD-type hydroxylase C-terminal domain NA29_RS04925 PF13640 2OG-Fe(II) oxygenase superfamily NA29_RS04955 PF01842 ACT domain NA29_RS04955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS04955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NA29_RS04960 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NA29_RS04960 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NA29_RS04975 PF00196 Bacterial regulatory proteins, luxR family NA29_RS04975 PF00072 Response regulator receiver domain NA29_RS04980 PF07730 Histidine kinase NA29_RS04980 PF17200 Single Cache domain 2 NA29_RS04985 PF02554 Carbon starvation protein CstA NA29_RS04985 PF13722 5TM C-terminal transporter carbon starvation CstA NA29_RS04990 PF04328 Selenoprotein, putative NA29_RS04995 PF06969 HemN C-terminal domain NA29_RS04995 PF04055 Radical SAM superfamily NA29_RS05000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS05000 PF03466 LysR substrate binding domain NA29_RS05005 PF01751 Toprim domain NA29_RS05005 PF01131 DNA topoisomerase NA29_RS05015 PF02481 DNA recombination-mediator protein A NA29_RS05015 PF17782 DprA winged helix domain NA29_RS05020 PF01327 Polypeptide deformylase NA29_RS05030 PF02911 Formyl transferase, C-terminal domain NA29_RS05030 PF00551 Formyl transferase NA29_RS05035 PF01435 Peptidase family M48 NA29_RS05040 PF01029 NusB family NA29_RS05040 PF01189 16S rRNA methyltransferase RsmB/F NA29_RS05050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS05050 PF00672 HAMP domain NA29_RS05050 PF00989 PAS fold NA29_RS05050 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS05055 PF00158 Sigma-54 interaction domain NA29_RS05055 PF02954 Bacterial regulatory protein, Fis family NA29_RS05055 PF02954 Bacterial regulatory protein, Fis family NA29_RS05055 PF00072 Response regulator receiver domain NA29_RS05055 PF00158 Sigma-54 interaction domain NA29_RS05055 PF00072 Response regulator receiver domain NA29_RS05065 PF06508 Queuosine biosynthesis protein QueC NA29_RS05075 PF01242 6-pyruvoyl tetrahydropterin synthase NA29_RS05090 PF09480 Type III secretion system protein PrgH-EprH (PrgH) NA29_RS05105 PF01514 Secretory protein of YscJ/FliF family NA29_RS05125 PF12833 Helix-turn-helix domain NA29_RS05130 PF03958 Bacterial type II/III secretion system short domain NA29_RS05130 PF00263 Bacterial type II and III secretion system protein NA29_RS05135 PF07201 HrpJ-like domain NA29_RS05140 PF00771 FHIPEP family NA29_RS05145 PF18269 T3SS EscN ATPase C-terminal domain NA29_RS05145 PF02874 ATP synthase alpha/beta family, beta-barrel domain NA29_RS05145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NA29_RS05160 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NA29_RS05165 PF00813 FliP family NA29_RS05170 PF01313 Bacterial export proteins, family 3 NA29_RS05175 PF01311 Bacterial export proteins, family 1 NA29_RS05180 PF01312 FlhB HrpN YscU SpaS Family NA29_RS05185 PF07720 Tetratricopeptide repeat NA29_RS05190 PF16535 Type III cell invasion protein SipB NA29_RS05190 PF04888 Secretion system effector C (SseC) like family NA29_RS05200 PF06511 Type III secretion systems tip complex components NA29_RS05205 PF00486 Transcriptional regulatory protein, C terminal NA29_RS05235 PF00102 Protein-tyrosine phosphatase NA29_RS05235 PF09013 YopH, N-terminal NA29_RS05250 PF01098 Cell cycle protein NA29_RS05255 PF00905 Penicillin binding protein transpeptidase domain NA29_RS05255 PF03717 Penicillin-binding Protein dimerisation domain NA29_RS05265 PF04085 rod shape-determining protein MreC NA29_RS05275 PF02686 Glu-tRNAGln amidotransferase C subunit NA29_RS05280 PF01425 Amidase NA29_RS05290 PF02637 GatB domain NA29_RS05290 PF02934 GatB/GatE catalytic domain NA29_RS05295 PF03976 Polyphosphate kinase 2 (PPK2) NA29_RS05300 PF13533 Biotin-lipoyl like NA29_RS05305 PF00873 AcrB/AcrD/AcrF family NA29_RS05335 PF00437 Type II/IV secretion system protein NA29_RS05345 PF01478 Type IV leader peptidase family NA29_RS05345 PF06750 Bacterial Peptidase A24 N-terminal domain NA29_RS05350 PF00732 GMC oxidoreductase NA29_RS05350 PF05199 GMC oxidoreductase NA29_RS05355 PF18158 Adaptive response protein AidB N-terminal domain NA29_RS05355 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS05355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS05360 PF00171 Aldehyde dehydrogenase family NA29_RS05365 PF02773 S-adenosylmethionine synthetase, C-terminal domain NA29_RS05365 PF02772 S-adenosylmethionine synthetase, central domain NA29_RS05365 PF00438 S-adenosylmethionine synthetase, N-terminal domain NA29_RS05370 PF03279 Bacterial lipid A biosynthesis acyltransferase NA29_RS05375 PF01678 Diaminopimelate epimerase NA29_RS05385 PF00589 Phage integrase family NA29_RS05385 PF02899 Phage integrase, N-terminal SAM-like domain NA29_RS05390 PF10672 S-adenosylmethionine-dependent methyltransferase NA29_RS05390 PF17785 PUA-like domain NA29_RS05405 PF02492 CobW/HypB/UreG, nucleotide-binding domain NA29_RS05405 PF07683 Cobalamin synthesis protein cobW C-terminal domain NA29_RS05410 PF01258 Prokaryotic dksA/traR C4-type zinc finger NA29_RS05420 PF07715 TonB-dependent Receptor Plug Domain NA29_RS05420 PF00593 TonB dependent receptor NA29_RS05425 PF00227 Proteasome subunit NA29_RS05430 PF07724 AAA domain (Cdc48 subfamily) NA29_RS05430 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS05435 PF00072 Response regulator receiver domain NA29_RS05455 PF00696 Amino acid kinase family NA29_RS05465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS05465 PF03466 LysR substrate binding domain NA29_RS05470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS05470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS05470 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS05475 PF00171 Aldehyde dehydrogenase family NA29_RS05480 PF07690 Major Facilitator Superfamily NA29_RS05480 PF00083 Sugar (and other) transporter NA29_RS05485 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS05485 PF00175 Oxidoreductase NAD-binding domain NA29_RS05490 PF00355 Rieske [2Fe-2S] domain NA29_RS05495 PF00392 Bacterial regulatory proteins, gntR family NA29_RS05495 PF07702 UTRA domain NA29_RS05500 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS05505 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit NA29_RS05505 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS05510 PF03466 LysR substrate binding domain NA29_RS05510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS05515 PF13458 Periplasmic binding protein NA29_RS05530 PF00005 ABC transporter NA29_RS05535 PF00005 ABC transporter NA29_RS05540 PF02585 GlcNAc-PI de-N-acetylase NA29_RS05545 PF03737 Aldolase/RraA NA29_RS05550 PF04303 PrpF protein NA29_RS05565 PF13609 Gram-negative porin NA29_RS05570 PF07690 Major Facilitator Superfamily NA29_RS05580 PF00440 Bacterial regulatory proteins, tetR family NA29_RS05585 PF00561 alpha/beta hydrolase fold NA29_RS05590 PF07021 Methionine biosynthesis protein MetW NA29_RS05590 PF00561 alpha/beta hydrolase fold NA29_RS05595 PF07690 Major Facilitator Superfamily NA29_RS05605 PF03372 Endonuclease/Exonuclease/phosphatase family NA29_RS05610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS05610 PF03466 LysR substrate binding domain NA29_RS05615 PF03788 LrgA family NA29_RS05620 PF04172 LrgB-like family NA29_RS05625 PF05221 S-adenosyl-L-homocysteine hydrolase NA29_RS05625 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NA29_RS05630 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NA29_RS05640 PF02219 Methylenetetrahydrofolate reductase NA29_RS05645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NA29_RS05650 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS05655 PF12911 N-terminal TM domain of oligopeptide transport permease C NA29_RS05655 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS05660 PF00005 ABC transporter NA29_RS05660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS05665 PF00005 ABC transporter NA29_RS05665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS05675 PF02492 CobW/HypB/UreG, nucleotide-binding domain NA29_RS05680 PF01730 UreF NA29_RS05685 PF02814 UreE urease accessory protein, N-terminal domain NA29_RS05685 PF05194 UreE urease accessory protein, C-terminal domain NA29_RS05690 PF01979 Amidohydrolase family NA29_RS05690 PF00449 Urease alpha-subunit, N-terminal domain NA29_RS05695 PF00699 Urease beta subunit NA29_RS05700 PF04955 HupE / UreJ protein NA29_RS05705 PF00547 Urease, gamma subunit NA29_RS05710 PF00005 ABC transporter NA29_RS05715 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS05720 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS05725 PF01774 UreD urease accessory protein NA29_RS05730 PF00005 ABC transporter NA29_RS05735 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS05735 PF00005 ABC transporter NA29_RS05740 PF02653 Branched-chain amino acid transport system / permease component NA29_RS05745 PF02653 Branched-chain amino acid transport system / permease component NA29_RS05760 PF07690 Major Facilitator Superfamily NA29_RS05765 PF01965 DJ-1/PfpI family NA29_RS05775 PF00155 Aminotransferase class I and II NA29_RS05780 PF00202 Aminotransferase class-III NA29_RS05785 PF00171 Aldehyde dehydrogenase family NA29_RS05790 PF03746 LamB/YcsF family NA29_RS05795 PF02626 Carboxyltransferase domain, subdomain A and B NA29_RS05800 PF02682 Carboxyltransferase domain, subdomain C and D NA29_RS05810 PF01464 Transglycosylase SLT domain NA29_RS05810 PF14718 Soluble lytic murein transglycosylase L domain NA29_RS05815 PF01370 NAD dependent epimerase/dehydratase family NA29_RS05825 PF01966 HD domain NA29_RS05825 PF01743 Poly A polymerase head domain NA29_RS05825 PF12627 Probable RNA and SrmB- binding site of polymerase A NA29_RS05830 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS05850 PF02152 Dihydroneopterin aldolase NA29_RS05855 PF01171 PP-loop family NA29_RS05860 PF12804 MobA-like NTP transferase domain NA29_RS05860 PF14602 Hexapeptide repeat of succinyl-transferase NA29_RS05860 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS05865 PF01380 SIS domain NA29_RS05885 PF13609 Gram-negative porin NA29_RS05890 PF01464 Transglycosylase SLT domain NA29_RS05900 PF13609 Gram-negative porin NA29_RS05905 PF08402 TOBE domain NA29_RS05905 PF00005 ABC transporter NA29_RS05920 PF00486 Transcriptional regulatory protein, C terminal NA29_RS05920 PF00072 Response regulator receiver domain NA29_RS05925 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS05925 PF08521 Two-component sensor kinase N-terminal NA29_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS05930 PF00266 Aminotransferase class-V NA29_RS05935 PF06628 Catalase-related immune-responsive NA29_RS05935 PF00199 Catalase NA29_RS05940 PF00654 Voltage gated chloride channel NA29_RS05950 PF13361 UvrD-like helicase C-terminal domain NA29_RS05950 PF00580 UvrD/REP helicase N-terminal domain NA29_RS05985 PF00764 Arginosuccinate synthase NA29_RS05990 PF03466 LysR substrate binding domain NA29_RS05990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06005 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS06010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06010 PF03466 LysR substrate binding domain NA29_RS06030 PF07690 Major Facilitator Superfamily NA29_RS06040 PF01494 FAD binding domain NA29_RS06050 PF04185 Phosphoesterase family NA29_RS06055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06055 PF03466 LysR substrate binding domain NA29_RS06070 PF13532 2OG-Fe(II) oxygenase superfamily NA29_RS06075 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA NA29_RS06080 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NA29_RS06080 PF12833 Helix-turn-helix domain NA29_RS06080 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NA29_RS06080 PF02805 Metal binding domain of Ada NA29_RS06095 PF02492 CobW/HypB/UreG, nucleotide-binding domain NA29_RS06095 PF07683 Cobalamin synthesis protein cobW C-terminal domain NA29_RS06105 PF17954 Quercetinase C-terminal cupin domain NA29_RS06105 PF02678 Pirin NA29_RS06110 PF02567 Phenazine biosynthesis-like protein NA29_RS06115 PF09186 Domain of unknown function (DUF1949) NA29_RS06115 PF01205 Uncharacterized protein family UPF0029 NA29_RS06125 PF07732 Multicopper oxidase NA29_RS06125 PF07731 Multicopper oxidase NA29_RS06125 PF10518 TAT (twin-arginine translocation) pathway signal sequence NA29_RS06125 PF00394 Multicopper oxidase NA29_RS06165 PF13609 Gram-negative porin NA29_RS06170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NA29_RS06170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NA29_RS06230 PF00682 HMGL-like NA29_RS06235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS06240 PF07152 YaeQ protein NA29_RS06255 PF01381 Helix-turn-helix NA29_RS06260 PF00892 EamA-like transporter family NA29_RS06265 PF05230 MASE2 domain NA29_RS06265 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS06280 PF13609 Gram-negative porin NA29_RS06285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NA29_RS06285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NA29_RS06290 PF12833 Helix-turn-helix domain NA29_RS06290 PF02311 AraC-like ligand binding domain NA29_RS06295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NA29_RS06295 PF00364 Biotin-requiring enzyme NA29_RS06295 PF00289 Biotin carboxylase, N-terminal domain NA29_RS06295 PF02785 Biotin carboxylase C-terminal domain NA29_RS06295 PF18140 Propionyl-coenzyme A carboxylase BT domain NA29_RS06300 PF04055 Radical SAM superfamily NA29_RS06300 PF06968 Biotin and Thiamin Synthesis associated domain NA29_RS06310 PF00155 Aminotransferase class I and II NA29_RS06315 PF00202 Aminotransferase class-III NA29_RS06320 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS06325 PF01039 Carboxyl transferase domain NA29_RS06340 PF00106 short chain dehydrogenase NA29_RS06345 PF02803 Thiolase, C-terminal domain NA29_RS06345 PF00108 Thiolase, N-terminal domain NA29_RS06350 PF00484 Carbonic anhydrase NA29_RS06355 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NA29_RS06360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS06360 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS06360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS06365 PF03061 Thioesterase superfamily NA29_RS06370 PF13411 MerR HTH family regulatory protein NA29_RS06375 PF00753 Metallo-beta-lactamase superfamily NA29_RS06380 PF07690 Major Facilitator Superfamily NA29_RS06395 PF13462 Thioredoxin NA29_RS06405 PF03485 Arginyl tRNA synthetase N terminal domain NA29_RS06405 PF00750 tRNA synthetases class I (R) NA29_RS06405 PF05746 DALR anticodon binding domain NA29_RS06420 PF02308 MgtC family NA29_RS06425 PF02607 B12 binding domain NA29_RS06425 PF02965 Vitamin B12 dependent methionine synthase, activation domain NA29_RS06425 PF00809 Pterin binding enzyme NA29_RS06425 PF02574 Homocysteine S-methyltransferase NA29_RS06425 PF02310 B12 binding domain NA29_RS06430 PF02310 B12 binding domain NA29_RS06430 PF02607 B12 binding domain NA29_RS06430 PF02965 Vitamin B12 dependent methionine synthase, activation domain NA29_RS06430 PF00809 Pterin binding enzyme NA29_RS06430 PF02574 Homocysteine S-methyltransferase NA29_RS06440 PF12091 Protein of unknown function (DUF3567) NA29_RS06445 PF00561 alpha/beta hydrolase fold NA29_RS06470 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS06490 PF01810 LysE type translocator NA29_RS06510 PF01467 Cytidylyltransferase-like NA29_RS06525 PF03309 Type III pantothenate kinase NA29_RS06530 PF02237 Biotin protein ligase C terminal domain NA29_RS06530 PF03099 Biotin/lipoate A/B protein ligase family NA29_RS06535 PF02405 Permease MlaE NA29_RS06540 PF00005 ABC transporter NA29_RS06560 PF07690 Major Facilitator Superfamily NA29_RS06575 PF07943 Penicillin-binding protein 5, C-terminal domain NA29_RS06575 PF00768 D-alanyl-D-alanine carboxypeptidase NA29_RS06580 PF01063 Amino-transferase class IV NA29_RS06585 PF04359 Protein of unknown function (DUF493) NA29_RS06590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06590 PF03466 LysR substrate binding domain NA29_RS06605 PF03099 Biotin/lipoate A/B protein ligase family NA29_RS06610 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NA29_RS06610 PF04055 Radical SAM superfamily NA29_RS06620 PF01614 Bacterial transcriptional regulator NA29_RS06620 PF09339 IclR helix-turn-helix domain NA29_RS06630 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS06635 PF00005 ABC transporter NA29_RS06640 PF00375 Sodium:dicarboxylate symporter family NA29_RS06645 PF02743 Cache domain NA29_RS06645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS06645 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS06650 PF00158 Sigma-54 interaction domain NA29_RS06650 PF00072 Response regulator receiver domain NA29_RS06650 PF02954 Bacterial regulatory protein, Fis family NA29_RS06655 PF00484 Carbonic anhydrase NA29_RS06660 PF00578 AhpC/TSA family NA29_RS06675 PF13335 Magnesium chelatase, subunit ChlI C-terminal NA29_RS06675 PF01078 Magnesium chelatase, subunit ChlI NA29_RS06680 PF04380 Membrane fusogenic activity NA29_RS06690 PF00543 Nitrogen regulatory protein P-II NA29_RS06695 PF00909 Ammonium Transporter Family NA29_RS06710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NA29_RS06710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NA29_RS06720 PF00381 PTS HPr component phosphorylation site NA29_RS06725 PF05524 PEP-utilising enzyme, N-terminal NA29_RS06725 PF00391 PEP-utilising enzyme, mobile domain NA29_RS06725 PF02896 PEP-utilising enzyme, TIM barrel domain NA29_RS06730 PF00899 ThiF family NA29_RS06735 PF03572 Peptidase family S41 NA29_RS06735 PF13180 PDZ domain NA29_RS06740 PF00300 Histidine phosphatase superfamily (branch 1) NA29_RS06745 PF00581 Rhodanese-like domain NA29_RS06750 PF00462 Glutaredoxin NA29_RS06755 PF02556 Preprotein translocase subunit SecB NA29_RS06760 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NA29_RS06760 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NA29_RS06765 PF01661 Macro domain NA29_RS06770 PF00588 SpoU rRNA Methylase family NA29_RS06775 PF00156 Phosphoribosyl transferase domain NA29_RS06780 PF08241 Methyltransferase domain NA29_RS06785 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS06790 PF02423 Ornithine cyclodeaminase/mu-crystallin family NA29_RS06795 PF00709 Adenylosuccinate synthetase NA29_RS06805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NA29_RS06805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NA29_RS06810 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS06815 PF01266 FAD dependent oxidoreductase NA29_RS06820 PF01613 Flavin reductase like domain NA29_RS06825 PF03472 Autoinducer binding domain NA29_RS06825 PF00196 Bacterial regulatory proteins, luxR family NA29_RS06835 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NA29_RS06835 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NA29_RS06840 PF00115 Cytochrome C and Quinol oxidase polypeptide I NA29_RS06845 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NA29_RS06855 PF00510 Cytochrome c oxidase subunit III NA29_RS06875 PF02628 Cytochrome oxidase assembly protein NA29_RS06880 PF01040 UbiA prenyltransferase family NA29_RS06885 PF02630 SCO1/SenC NA29_RS06895 PF02322 Cytochrome bd terminal oxidase subunit II NA29_RS06900 PF01654 Cytochrome bd terminal oxidase subunit I NA29_RS06910 PF04545 Sigma-70, region 4 NA29_RS06910 PF04542 Sigma-70 region 2 NA29_RS06910 PF00140 Sigma-70 factor, region 1.2 NA29_RS06920 PF02885 Glycosyl transferase family, helical bundle domain NA29_RS06925 PF14497 Glutathione S-transferase, C-terminal domain NA29_RS06925 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS06930 PF01810 LysE type translocator NA29_RS06935 PF00448 SRP54-type protein, GTPase domain NA29_RS06935 PF02881 SRP54-type protein, helical bundle domain NA29_RS06940 PF05193 Peptidase M16 inactive domain NA29_RS06940 PF00675 Insulinase (Peptidase family M16) NA29_RS06945 PF05193 Peptidase M16 inactive domain NA29_RS06950 PF01061 ABC-2 type transporter NA29_RS06955 PF00005 ABC transporter NA29_RS06965 PF01467 Cytidylyltransferase-like NA29_RS06975 PF00037 4Fe-4S binding domain NA29_RS06980 PF01195 Peptidyl-tRNA hydrolase NA29_RS06985 PF14693 Ribosomal protein TL5, C-terminal domain NA29_RS06985 PF01386 Ribosomal L25p family NA29_RS06990 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NA29_RS06990 PF14572 Phosphoribosyl synthetase-associated domain NA29_RS07000 PF08544 GHMP kinases C terminal NA29_RS07000 PF00288 GHMP kinases N terminal domain NA29_RS07005 PF03550 Outer membrane lipoprotein LolB NA29_RS07015 PF06827 Zinc finger found in FPG and IleRS NA29_RS07015 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NA29_RS07015 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NA29_RS07020 PF00730 HhH-GPD superfamily base excision DNA repair protein NA29_RS07020 PF14815 NUDIX domain NA29_RS07020 PF10576 Iron-sulfur binding domain of endonuclease III NA29_RS07020 PF00633 Helix-hairpin-helix motif NA29_RS07025 PF03668 P-loop ATPase protein family NA29_RS07035 PF02603 HPr Serine kinase N terminus NA29_RS07035 PF07475 HPr Serine kinase C-terminal domain NA29_RS07040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NA29_RS07045 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NA29_RS07050 PF04552 Sigma-54, DNA binding domain NA29_RS07050 PF00309 Sigma-54 factor, Activator interacting domain (AID) NA29_RS07050 PF04963 Sigma-54 factor, core binding domain NA29_RS07055 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS07055 PF00005 ABC transporter NA29_RS07075 PF00571 CBS domain NA29_RS07075 PF01380 SIS domain NA29_RS07080 PF00999 Sodium/hydrogen exchanger family NA29_RS07080 PF02254 TrkA-N domain NA29_RS07080 PF02080 TrkA-C domain NA29_RS07085 PF00156 Phosphoribosyl transferase domain NA29_RS07095 PF08220 DeoR-like helix-turn-helix domain NA29_RS07095 PF00455 DeoR C terminal sensor domain NA29_RS07100 PF00005 ABC transporter NA29_RS07110 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS07115 PF07969 Amidohydrolase family NA29_RS07120 PF00005 ABC transporter NA29_RS07125 PF00005 ABC transporter NA29_RS07130 PF06007 Phosphonate metabolism protein PhnJ NA29_RS07135 PF05861 Bacterial phosphonate metabolism protein (PhnI) NA29_RS07140 PF05845 Bacterial phosphonate metabolism protein (PhnH) NA29_RS07145 PF06754 Phosphonate metabolism protein PhnG NA29_RS07150 PF07702 UTRA domain NA29_RS07150 PF00392 Bacterial regulatory proteins, gntR family NA29_RS07155 PF06299 Protein of unknown function (DUF1045) NA29_RS07170 PF01872 RibD C-terminal domain NA29_RS07175 PF08669 Glycine cleavage T-protein C-terminal barrel domain NA29_RS07175 PF01571 Aminomethyltransferase folate-binding domain NA29_RS07175 PF16350 FAD dependent oxidoreductase central domain NA29_RS07175 PF01266 FAD dependent oxidoreductase NA29_RS07185 PF00551 Formyl transferase NA29_RS07190 PF07690 Major Facilitator Superfamily NA29_RS07200 PF12951 Passenger-associated-transport-repeat NA29_RS07205 PF00266 Aminotransferase class-V NA29_RS07210 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS07215 PF00005 ABC transporter NA29_RS07225 PF00392 Bacterial regulatory proteins, gntR family NA29_RS07225 PF07729 FCD domain NA29_RS07230 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase NA29_RS07235 PF00171 Aldehyde dehydrogenase family NA29_RS07240 PF02690 Na+/Pi-cotransporter NA29_RS07245 PF01966 HD domain NA29_RS07260 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS07265 PF13309 HTH domain NA29_RS07265 PF08348 YheO-like PAS domain NA29_RS07275 PF17760 UvrA interaction domain NA29_RS07275 PF17755 UvrA DNA-binding domain NA29_RS07280 PF07690 Major Facilitator Superfamily NA29_RS07285 PF00436 Single-strand binding protein family NA29_RS07290 PF01381 Helix-turn-helix NA29_RS07300 PF02086 D12 class N6 adenine-specific DNA methyltransferase NA29_RS07360 PF01734 Patatin-like phospholipase NA29_RS07365 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS07365 PF00672 HAMP domain NA29_RS07370 PF00072 Response regulator receiver domain NA29_RS07370 PF00486 Transcriptional regulatory protein, C terminal NA29_RS07375 PF07681 DoxX NA29_RS07385 PF07729 FCD domain NA29_RS07385 PF00392 Bacterial regulatory proteins, gntR family NA29_RS07395 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS07400 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS07405 PF00005 ABC transporter NA29_RS07410 PF00356 Bacterial regulatory proteins, lacI family NA29_RS07415 PF09423 PhoD-like phosphatase NA29_RS07415 PF16655 PhoD-like phosphatase, N-terminal domain NA29_RS07420 PF01966 HD domain NA29_RS07430 PF01037 Lrp/AsnC ligand binding domain NA29_RS07435 PF07687 Peptidase dimerisation domain NA29_RS07435 PF01546 Peptidase family M20/M25/M40 NA29_RS07440 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS07445 PF01546 Peptidase family M20/M25/M40 NA29_RS07445 PF07687 Peptidase dimerisation domain NA29_RS07450 PF00392 Bacterial regulatory proteins, gntR family NA29_RS07450 PF07729 FCD domain NA29_RS07455 PF00171 Aldehyde dehydrogenase family NA29_RS07460 PF00155 Aminotransferase class I and II NA29_RS07465 PF00171 Aldehyde dehydrogenase family NA29_RS07475 PF03466 LysR substrate binding domain NA29_RS07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07485 PF01063 Amino-transferase class IV NA29_RS07495 PF14834 Glutathione S-transferase, C-terminal domain NA29_RS07495 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS07500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07500 PF03466 LysR substrate binding domain NA29_RS07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07505 PF03466 LysR substrate binding domain NA29_RS07520 PF07690 Major Facilitator Superfamily NA29_RS07525 PF13609 Gram-negative porin NA29_RS07530 PF00248 Aldo/keto reductase family NA29_RS07535 PF12833 Helix-turn-helix domain NA29_RS07535 PF06719 AraC-type transcriptional regulator N-terminus NA29_RS07540 PF04221 RelB antitoxin NA29_RS07545 PF13298 DNA polymerase Ligase (LigD) NA29_RS07545 PF01068 ATP dependent DNA ligase domain NA29_RS07545 PF04679 ATP dependent DNA ligase C terminal region NA29_RS07550 PF02735 Ku70/Ku80 beta-barrel domain NA29_RS07565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NA29_RS07565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS07570 PF07690 Major Facilitator Superfamily NA29_RS07575 PF01494 FAD binding domain NA29_RS07580 PF14497 Glutathione S-transferase, C-terminal domain NA29_RS07580 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS07585 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS07590 PF07883 Cupin domain NA29_RS07595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07595 PF03466 LysR substrate binding domain NA29_RS07600 PF07499 RuvA, C-terminal domain NA29_RS07600 PF01330 RuvA N terminal domain NA29_RS07605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07605 PF03466 LysR substrate binding domain NA29_RS07610 PF13411 MerR HTH family regulatory protein NA29_RS07610 PF07739 TipAS antibiotic-recognition domain NA29_RS07620 PF00083 Sugar (and other) transporter NA29_RS07625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS07635 PF03466 LysR substrate binding domain NA29_RS07635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07645 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07655 PF03466 LysR substrate binding domain NA29_RS07660 PF07690 Major Facilitator Superfamily NA29_RS07665 PF03928 Haem-degrading NA29_RS07670 PF03466 LysR substrate binding domain NA29_RS07670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07675 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NA29_RS07675 PF17287 POTRA domain NA29_RS07675 PF08479 POTRA domain, ShlB-type NA29_RS07680 PF05594 Haemagluttinin repeat NA29_RS07680 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain NA29_RS07680 PF13332 Hemagglutinin repeat NA29_RS07680 PF05860 haemagglutination activity domain NA29_RS07680 PF13018 Extended Signal Peptide of Type V secretion system NA29_RS07705 PF03466 LysR substrate binding domain NA29_RS07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07710 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS07720 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS07725 PF00491 Arginase family NA29_RS07730 PF00005 ABC transporter NA29_RS07735 PF01042 Endoribonuclease L-PSP NA29_RS07745 PF01638 HxlR-like helix-turn-helix NA29_RS07750 PF00043 Glutathione S-transferase, C-terminal domain NA29_RS07750 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS07755 PF01494 FAD binding domain NA29_RS07770 PF00440 Bacterial regulatory proteins, tetR family NA29_RS07780 PF07690 Major Facilitator Superfamily NA29_RS07785 PF07690 Major Facilitator Superfamily NA29_RS07795 PF00890 FAD binding domain NA29_RS07795 PF04205 FMN-binding domain NA29_RS07800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07800 PF03466 LysR substrate binding domain NA29_RS07805 PF09339 IclR helix-turn-helix domain NA29_RS07805 PF01614 Bacterial transcriptional regulator NA29_RS07810 PF01494 FAD binding domain NA29_RS07815 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS07820 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS07825 PF07690 Major Facilitator Superfamily NA29_RS07830 PF12697 Alpha/beta hydrolase family NA29_RS07835 PF03466 LysR substrate binding domain NA29_RS07835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07840 PF00501 AMP-binding enzyme NA29_RS07840 PF13193 AMP-binding enzyme C-terminal domain NA29_RS07845 PF00083 Sugar (and other) transporter NA29_RS07865 PF01738 Dienelactone hydrolase family NA29_RS07870 PF13609 Gram-negative porin NA29_RS07875 PF00753 Metallo-beta-lactamase superfamily NA29_RS07880 PF07690 Major Facilitator Superfamily NA29_RS07900 PF01638 HxlR-like helix-turn-helix NA29_RS07905 PF00296 Luciferase-like monooxygenase NA29_RS07910 PF01266 FAD dependent oxidoreductase NA29_RS07915 PF00248 Aldo/keto reductase family NA29_RS07920 PF01292 Prokaryotic cytochrome b561 NA29_RS07925 PF00593 TonB dependent receptor NA29_RS07925 PF07715 TonB-dependent Receptor Plug Domain NA29_RS07935 PF03922 OmpW family NA29_RS07940 PF00905 Penicillin binding protein transpeptidase domain NA29_RS07940 PF00912 Transglycosylase NA29_RS07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07945 PF03466 LysR substrate binding domain NA29_RS07955 PF01209 ubiE/COQ5 methyltransferase family NA29_RS07960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NA29_RS07960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS07965 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS07970 PF00561 alpha/beta hydrolase fold NA29_RS07975 PF00155 Aminotransferase class I and II NA29_RS07980 PF00324 Amino acid permease NA29_RS07985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NA29_RS07990 PF01037 Lrp/AsnC ligand binding domain NA29_RS07995 PF00682 HMGL-like NA29_RS07995 PF08502 LeuA allosteric (dimerisation) domain NA29_RS08000 PF02803 Thiolase, C-terminal domain NA29_RS08000 PF00108 Thiolase, N-terminal domain NA29_RS08005 PF01144 Coenzyme A transferase NA29_RS08010 PF01144 Coenzyme A transferase NA29_RS08015 PF09339 IclR helix-turn-helix domain NA29_RS08015 PF01614 Bacterial transcriptional regulator NA29_RS08025 PF01494 FAD binding domain NA29_RS08045 PF00328 Histidine phosphatase superfamily (branch 2) NA29_RS08055 PF01047 MarR family NA29_RS08065 PF07690 Major Facilitator Superfamily NA29_RS08070 PF04349 Periplasmic glucan biosynthesis protein, MdoG NA29_RS08075 PF14310 Fibronectin type III-like domain NA29_RS08075 PF00933 Glycosyl hydrolase family 3 N terminal domain NA29_RS08075 PF01915 Glycosyl hydrolase family 3 C-terminal domain NA29_RS08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08080 PF03466 LysR substrate binding domain NA29_RS08085 PF00180 Isocitrate/isopropylmalate dehydrogenase NA29_RS08090 PF00296 Luciferase-like monooxygenase NA29_RS08100 PF03466 LysR substrate binding domain NA29_RS08100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NA29_RS08120 PF00083 Sugar (and other) transporter NA29_RS08125 PF05199 GMC oxidoreductase NA29_RS08125 PF00732 GMC oxidoreductase NA29_RS08130 PF09339 IclR helix-turn-helix domain NA29_RS08130 PF01614 Bacterial transcriptional regulator NA29_RS08135 PF01614 Bacterial transcriptional regulator NA29_RS08135 PF09339 IclR helix-turn-helix domain NA29_RS08140 PF12556 Cobaltochelatase CobS subunit N terminal NA29_RS08140 PF08406 CbbQ/NirQ/NorQ C-terminal NA29_RS08140 PF07728 AAA domain (dynein-related subfamily) NA29_RS08145 PF06213 Cobalamin biosynthesis protein CobT NA29_RS08145 PF11775 Cobalamin biosynthesis protein CobT VWA domain NA29_RS08150 PF01925 Sulfite exporter TauE/SafE NA29_RS08155 PF01515 Phosphate acetyl/butaryl transferase NA29_RS08160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS08160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS08160 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS08170 PF01494 FAD binding domain NA29_RS08190 PF00474 Sodium:solute symporter family NA29_RS08195 PF01979 Amidohydrolase family NA29_RS08200 PF07683 Cobalamin synthesis protein cobW C-terminal domain NA29_RS08200 PF02492 CobW/HypB/UreG, nucleotide-binding domain NA29_RS08220 PF00324 Amino acid permease NA29_RS08225 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS08230 PF00005 ABC transporter NA29_RS08235 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NA29_RS08240 PF00392 Bacterial regulatory proteins, gntR family NA29_RS08240 PF00155 Aminotransferase class I and II NA29_RS08245 PF13417 Glutathione S-transferase, N-terminal domain NA29_RS08245 PF00043 Glutathione S-transferase, C-terminal domain NA29_RS08255 PF13609 Gram-negative porin NA29_RS08265 PF00682 HMGL-like NA29_RS08270 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS08275 PF02515 CoA-transferase family III NA29_RS08280 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS08285 PF13193 AMP-binding enzyme C-terminal domain NA29_RS08285 PF00501 AMP-binding enzyme NA29_RS08290 PF07690 Major Facilitator Superfamily NA29_RS08300 PF03060 Nitronate monooxygenase NA29_RS08305 PF12697 Alpha/beta hydrolase family NA29_RS08310 PF00072 Response regulator receiver domain NA29_RS08310 PF00486 Transcriptional regulatory protein, C terminal NA29_RS08315 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS08315 PF00672 HAMP domain NA29_RS08315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS08325 PF01613 Flavin reductase like domain NA29_RS08330 PF00296 Luciferase-like monooxygenase NA29_RS08335 PF00005 ABC transporter NA29_RS08340 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS08345 PF03466 LysR substrate binding domain NA29_RS08345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08350 PF00892 EamA-like transporter family NA29_RS08355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NA29_RS08360 PF00248 Aldo/keto reductase family NA29_RS08365 PF07690 Major Facilitator Superfamily NA29_RS08370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08370 PF03466 LysR substrate binding domain NA29_RS08380 PF02525 Flavodoxin-like fold NA29_RS08395 PF00324 Amino acid permease NA29_RS08400 PF02469 Fasciclin domain NA29_RS08410 PF04542 Sigma-70 region 2 NA29_RS08410 PF04545 Sigma-70, region 4 NA29_RS08420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08420 PF03466 LysR substrate binding domain NA29_RS08425 PF02677 Epoxyqueuosine reductase QueH NA29_RS08435 PF08267 Cobalamin-independent synthase, N-terminal domain NA29_RS08435 PF01717 Cobalamin-independent synthase, Catalytic domain NA29_RS08440 PF01613 Flavin reductase like domain NA29_RS08450 PF01965 DJ-1/PfpI family NA29_RS08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08455 PF03466 LysR substrate binding domain NA29_RS08465 PF01546 Peptidase family M20/M25/M40 NA29_RS08465 PF07687 Peptidase dimerisation domain NA29_RS08470 PF07690 Major Facilitator Superfamily NA29_RS08485 PF00766 Electron transfer flavoprotein FAD-binding domain NA29_RS08485 PF01012 Electron transfer flavoprotein domain NA29_RS08490 PF01012 Electron transfer flavoprotein domain NA29_RS08495 PF13520 Amino acid permease NA29_RS08505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NA29_RS08505 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS08510 PF00120 Glutamine synthetase, catalytic domain NA29_RS08525 PF13609 Gram-negative porin NA29_RS08530 PF03825 Nucleoside H+ symporter NA29_RS08535 PF01425 Amidase NA29_RS08545 PF13683 Integrase core domain NA29_RS08545 PF13276 HTH-like domain NA29_RS08555 PF07690 Major Facilitator Superfamily NA29_RS08570 PF01380 SIS domain NA29_RS08570 PF01418 Helix-turn-helix domain, rpiR family NA29_RS08575 PF07969 Amidohydrolase family NA29_RS08580 PF01042 Endoribonuclease L-PSP NA29_RS08595 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NA29_RS08595 PF14489 QueF-like protein NA29_RS08605 PF00585 C-terminal regulatory domain of Threonine dehydratase NA29_RS08605 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS08615 PF09335 SNARE associated Golgi protein NA29_RS08620 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NA29_RS08625 PF01799 [2Fe-2S] binding domain NA29_RS08625 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS08635 PF00999 Sodium/hydrogen exchanger family NA29_RS08650 PF01209 ubiE/COQ5 methyltransferase family NA29_RS08665 PF03109 ABC1 family NA29_RS08670 PF05724 Thiopurine S-methyltransferase (TPMT) NA29_RS08690 PF01336 OB-fold nucleic acid binding domain NA29_RS08690 PF00152 tRNA synthetases class II (D, K and N) NA29_RS08690 PF02938 GAD domain NA29_RS08695 PF00293 NUDIX domain NA29_RS08700 PF13091 PLD-like domain NA29_RS08710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS08710 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS08710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS08710 PF12806 Acetyl-CoA dehydrogenase C-terminal like NA29_RS08715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NA29_RS08715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NA29_RS08715 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS08720 PF02803 Thiolase, C-terminal domain NA29_RS08720 PF00108 Thiolase, N-terminal domain NA29_RS08725 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS08730 PF03061 Thioesterase superfamily NA29_RS08735 PF00664 ABC transporter transmembrane region NA29_RS08735 PF00005 ABC transporter NA29_RS08745 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NA29_RS08745 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NA29_RS08750 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS08755 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS08760 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS08765 PF00005 ABC transporter NA29_RS08770 PF13230 Glutamine amidotransferases class-II NA29_RS08775 PF01979 Amidohydrolase family NA29_RS08790 PF00572 Ribosomal protein L13 NA29_RS08795 PF00380 Ribosomal protein S9/S16 NA29_RS08800 PF01118 Semialdehyde dehydrogenase, NAD binding domain NA29_RS08800 PF02774 Semialdehyde dehydrogenase, dimerisation domain NA29_RS08805 PF01521 Iron-sulphur cluster biosynthesis NA29_RS08810 PF03702 Anhydro-N-acetylmuramic acid kinase NA29_RS08815 PF01551 Peptidase family M23 NA29_RS08820 PF01479 S4 domain NA29_RS08820 PF00579 tRNA synthetases class I (W and Y) NA29_RS08825 PF02580 D-Tyr-tRNA(Tyr) deacylase NA29_RS08830 PF01161 Phosphatidylethanolamine-binding protein NA29_RS08835 PF00300 Histidine phosphatase superfamily (branch 1) NA29_RS08845 PF05496 Holliday junction DNA helicase RuvB P-loop domain NA29_RS08845 PF05491 RuvB C-terminal winged helix domain NA29_RS08845 PF17864 RuvB AAA lid domain NA29_RS08850 PF02075 Crossover junction endodeoxyribonuclease RuvC NA29_RS08855 PF03653 Uncharacterised protein family (UPF0093) NA29_RS08865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NA29_RS08865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS08870 PF01418 Helix-turn-helix domain, rpiR family NA29_RS08870 PF01380 SIS domain NA29_RS08875 PF00920 Dehydratase family NA29_RS08880 PF01081 KDPG and KHG aldolase NA29_RS08885 PF02447 GntP family permease NA29_RS08895 PF02926 THUMP domain NA29_RS08895 PF01170 Putative RNA methylase family UPF0020 NA29_RS08905 PF01048 Phosphorylase superfamily NA29_RS08910 PF02233 NAD(P) transhydrogenase beta subunit NA29_RS08915 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NA29_RS08920 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NA29_RS08920 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NA29_RS08925 PF00293 NUDIX domain NA29_RS08935 PF01645 Conserved region in glutamate synthase NA29_RS08940 PF12833 Helix-turn-helix domain NA29_RS08960 PF01514 Secretory protein of YscJ/FliF family NA29_RS08995 PF03958 Bacterial type II/III secretion system short domain NA29_RS08995 PF00263 Bacterial type II and III secretion system protein NA29_RS09005 PF00196 Bacterial regulatory proteins, luxR family NA29_RS09005 PF00072 Response regulator receiver domain NA29_RS09015 PF00771 FHIPEP family NA29_RS09020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NA29_RS09020 PF18269 T3SS EscN ATPase C-terminal domain NA29_RS09020 PF02874 ATP synthase alpha/beta family, beta-barrel domain NA29_RS09040 PF00813 FliP family NA29_RS09045 PF01313 Bacterial export proteins, family 3 NA29_RS09050 PF01311 Bacterial export proteins, family 1 NA29_RS09055 PF01312 FlhB HrpN YscU SpaS Family NA29_RS09070 PF08328 Adenylosuccinate lyase C-terminal NA29_RS09070 PF00206 Lyase NA29_RS09075 PF01322 Cytochrome C' NA29_RS09090 PF07549 SecD/SecF GG Motif NA29_RS09090 PF02355 Protein export membrane protein NA29_RS09095 PF07549 SecD/SecF GG Motif NA29_RS09095 PF13721 SecD export protein N-terminal TM region NA29_RS09095 PF02355 Protein export membrane protein NA29_RS09100 PF02699 Preprotein translocase subunit NA29_RS09105 PF01702 Queuine tRNA-ribosyltransferase NA29_RS09110 PF02547 Queuosine biosynthesis protein NA29_RS09115 PF00270 DEAD/DEAH box helicase NA29_RS09115 PF00271 Helicase conserved C-terminal domain NA29_RS09115 PF17191 RecG wedge domain NA29_RS09120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS09120 PF03466 LysR substrate binding domain NA29_RS09125 PF00199 Catalase NA29_RS09125 PF06628 Catalase-related immune-responsive NA29_RS09130 PF02581 Thiamine monophosphate synthase NA29_RS09135 PF00210 Ferritin-like domain NA29_RS09140 PF02698 DUF218 domain NA29_RS09145 PF03928 Haem-degrading NA29_RS09150 PF10636 Hemin uptake protein hemP NA29_RS09165 PF05726 Pirin C-terminal cupin domain NA29_RS09165 PF02678 Pirin NA29_RS09170 PF02472 Biopolymer transport protein ExbD/TolR NA29_RS09175 PF01618 MotA/TolQ/ExbB proton channel family NA29_RS09180 PF03544 Gram-negative bacterial TonB protein C-terminal NA29_RS09190 PF01177 Asp/Glu/Hydantoin racemase NA29_RS09195 PF00210 Ferritin-like domain NA29_RS09205 PF03350 Uncharacterized protein family, UPF0114 NA29_RS09215 PF00501 AMP-binding enzyme NA29_RS09215 PF13193 AMP-binding enzyme C-terminal domain NA29_RS09215 PF16177 Acetyl-coenzyme A synthetase N-terminus NA29_RS09225 PF00474 Sodium:solute symporter family NA29_RS09240 PF02469 Fasciclin domain NA29_RS09280 PF00576 HIUase/Transthyretin family NA29_RS09295 PF00005 ABC transporter NA29_RS09300 PF02653 Branched-chain amino acid transport system / permease component NA29_RS09305 PF13458 Periplasmic binding protein NA29_RS09315 PF07729 FCD domain NA29_RS09315 PF00392 Bacterial regulatory proteins, gntR family NA29_RS09320 PF01613 Flavin reductase like domain NA29_RS09325 PF00083 Sugar (and other) transporter NA29_RS09330 PF02515 CoA-transferase family III NA29_RS09370 PF07969 Amidohydrolase family NA29_RS09375 PF00196 Bacterial regulatory proteins, luxR family NA29_RS09375 PF00072 Response regulator receiver domain NA29_RS09390 PF01618 MotA/TolQ/ExbB proton channel family NA29_RS09395 PF02472 Biopolymer transport protein ExbD/TolR NA29_RS09480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NA29_RS09485 PF00005 ABC transporter NA29_RS09485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS09490 PF00005 ABC transporter NA29_RS09490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS09495 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS09495 PF12911 N-terminal TM domain of oligopeptide transport permease C NA29_RS09500 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS09505 PF13454 FAD-NAD(P)-binding NA29_RS09510 PF03466 LysR substrate binding domain NA29_RS09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS09515 PF00929 Exonuclease NA29_RS09515 PF11490 DNA polymerase III polC-type N-terminus II NA29_RS09515 PF07733 Bacterial DNA polymerase III alpha NTPase domain NA29_RS09515 PF14480 DNA polymerase III polC-type N-terminus I NA29_RS09515 PF02811 PHP domain NA29_RS09515 PF14579 Helix-hairpin-helix motif NA29_RS09515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NA29_RS09530 PF08448 PAS fold NA29_RS09530 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS09540 PF00392 Bacterial regulatory proteins, gntR family NA29_RS09540 PF07729 FCD domain NA29_RS09550 PF00561 alpha/beta hydrolase fold NA29_RS09575 PF01799 [2Fe-2S] binding domain NA29_RS09575 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS09580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS09580 PF00034 Cytochrome c NA29_RS09595 PF01625 Peptide methionine sulfoxide reductase NA29_RS09600 PF02683 Cytochrome C biogenesis protein transmembrane region NA29_RS09600 PF00578 AhpC/TSA family NA29_RS09600 PF17991 Thioredoxin like C-terminal domain NA29_RS09605 PF01641 SelR domain NA29_RS09610 PF00486 Transcriptional regulatory protein, C terminal NA29_RS09610 PF00072 Response regulator receiver domain NA29_RS09615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS09615 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS09615 PF07689 KaiB domain NA29_RS09625 PF00939 Sodium:sulfate symporter transmembrane region NA29_RS09635 PF05958 tRNA (Uracil-5-)-methyltransferase NA29_RS09650 PF00171 Aldehyde dehydrogenase family NA29_RS09655 PF00202 Aminotransferase class-III NA29_RS09660 PF00202 Aminotransferase class-III NA29_RS09665 PF00171 Aldehyde dehydrogenase family NA29_RS09670 PF01037 Lrp/AsnC ligand binding domain NA29_RS09675 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NA29_RS09680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS09695 PF01613 Flavin reductase like domain NA29_RS09700 PF00171 Aldehyde dehydrogenase family NA29_RS09705 PF00296 Luciferase-like monooxygenase NA29_RS09710 PF00561 alpha/beta hydrolase fold NA29_RS09720 PF00571 CBS domain NA29_RS09720 PF00005 ABC transporter NA29_RS09725 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS09730 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NA29_RS09740 PF00166 Chaperonin 10 Kd subunit NA29_RS09745 PF00118 TCP-1/cpn60 chaperonin family NA29_RS09750 PF03466 LysR substrate binding domain NA29_RS09750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS09760 PF01047 MarR family NA29_RS09765 PF00892 EamA-like transporter family NA29_RS09770 PF01967 MoaC family NA29_RS09775 PF01435 Peptidase family M48 NA29_RS09785 PF00561 alpha/beta hydrolase fold NA29_RS09795 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NA29_RS09815 PF00162 Phosphoglycerate kinase NA29_RS09820 PF00224 Pyruvate kinase, barrel domain NA29_RS09820 PF02887 Pyruvate kinase, alpha/beta domain NA29_RS09825 PF01116 Fructose-bisphosphate aldolase class-II NA29_RS09840 PF01259 SAICAR synthetase NA29_RS09845 PF00731 AIR carboxylase NA29_RS09850 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NA29_RS09850 PF02222 ATP-grasp domain NA29_RS09855 PF01300 Telomere recombination NA29_RS09855 PF03481 Putative GTP-binding controlling metal-binding NA29_RS09860 PF04116 Fatty acid hydroxylase superfamily NA29_RS09865 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NA29_RS09870 PF00486 Transcriptional regulatory protein, C terminal NA29_RS09870 PF00072 Response regulator receiver domain NA29_RS09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS09875 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS09885 PF13180 PDZ domain NA29_RS09895 PF02625 XdhC and CoxI family NA29_RS09895 PF13478 XdhC Rossmann domain NA29_RS09905 PF03459 TOBE domain NA29_RS09905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS09910 PF01292 Prokaryotic cytochrome b561 NA29_RS09915 PF00174 Oxidoreductase molybdopterin binding domain NA29_RS09925 PF00005 ABC transporter NA29_RS09925 PF03459 TOBE domain NA29_RS09930 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS09940 PF00440 Bacterial regulatory proteins, tetR family NA29_RS09940 PF08361 MAATS-type transcriptional repressor, C-terminal region NA29_RS09945 PF00529 HlyD membrane-fusion protein of T1SS NA29_RS09945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NA29_RS09950 PF00873 AcrB/AcrD/AcrF family NA29_RS09955 PF02321 Outer membrane efflux protein NA29_RS09995 PF05957 Bacterial protein of unknown function (DUF883) NA29_RS10000 PF00578 AhpC/TSA family NA29_RS10000 PF10417 C-terminal domain of 1-Cys peroxiredoxin NA29_RS10005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS10005 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS10005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS10015 PF03301 Tryptophan 2,3-dioxygenase NA29_RS10020 PF00266 Aminotransferase class-V NA29_RS10025 PF04199 Putative cyclase NA29_RS10035 PF01613 Flavin reductase like domain NA29_RS10045 PF12697 Alpha/beta hydrolase family NA29_RS10050 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS10050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS10050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS10055 PF13193 AMP-binding enzyme C-terminal domain NA29_RS10055 PF00501 AMP-binding enzyme NA29_RS10065 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS10070 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS10075 PF00005 ABC transporter NA29_RS10080 PF00491 Arginase family NA29_RS10085 PF01625 Peptide methionine sulfoxide reductase NA29_RS10100 PF07690 Major Facilitator Superfamily NA29_RS10105 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NA29_RS10105 PF12241 Trans-2-enoyl-CoA reductase catalytic region NA29_RS10105 PF07055 Enoyl reductase FAD binding domain NA29_RS10120 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NA29_RS10120 PF01243 Pyridoxamine 5'-phosphate oxidase NA29_RS10125 PF05170 AsmA family NA29_RS10130 PF00899 ThiF family NA29_RS10135 PF13193 AMP-binding enzyme C-terminal domain NA29_RS10135 PF00501 AMP-binding enzyme NA29_RS10155 PF07690 Major Facilitator Superfamily NA29_RS10160 PF13533 Biotin-lipoyl like NA29_RS10165 PF00440 Bacterial regulatory proteins, tetR family NA29_RS10165 PF17933 Tetracyclin repressor-like, C-terminal domain NA29_RS10170 PF00324 Amino acid permease NA29_RS10175 PF13609 Gram-negative porin NA29_RS10180 PF01037 Lrp/AsnC ligand binding domain NA29_RS10185 PF01070 FMN-dependent dehydrogenase NA29_RS10190 PF07927 HicA toxin of bacterial toxin-antitoxin, NA29_RS10195 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system NA29_RS10195 PF01381 Helix-turn-helix NA29_RS10205 PF03466 LysR substrate binding domain NA29_RS10205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10210 PF07690 Major Facilitator Superfamily NA29_RS10220 PF01425 Amidase NA29_RS10245 PF00005 ABC transporter NA29_RS10255 PF09084 NMT1/THI5 like NA29_RS10260 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS10265 PF00296 Luciferase-like monooxygenase NA29_RS10270 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS10270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS10270 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS10275 PF05995 Cysteine dioxygenase type I NA29_RS10280 PF00581 Rhodanese-like domain NA29_RS10295 PF03797 Autotransporter beta-domain NA29_RS10295 PF13018 Extended Signal Peptide of Type V secretion system NA29_RS10295 PF16168 Adhesin of bacterial autotransporter system, probable stalk NA29_RS10295 PF03212 Pertactin NA29_RS10300 PF03212 Pertactin NA29_RS10300 PF03797 Autotransporter beta-domain NA29_RS10300 PF13018 Extended Signal Peptide of Type V secretion system NA29_RS10300 PF16168 Adhesin of bacterial autotransporter system, probable stalk NA29_RS10335 PF01476 LysM domain NA29_RS10335 PF02368 Bacterial Ig-like domain (group 2) NA29_RS10335 PF02369 Bacterial Ig-like domain (group 1) NA29_RS10335 PF11924 Inverse autotransporter, beta-domain NA29_RS10335 PF07979 Intimin C-type lectin domain NA29_RS10350 PF00765 Autoinducer synthase NA29_RS10355 PF00196 Bacterial regulatory proteins, luxR family NA29_RS10355 PF03472 Autoinducer binding domain NA29_RS10365 PF00465 Iron-containing alcohol dehydrogenase NA29_RS10370 PF00005 ABC transporter NA29_RS10375 PF00005 ABC transporter NA29_RS10375 PF09383 NIL domain NA29_RS10385 PF02653 Branched-chain amino acid transport system / permease component NA29_RS10395 PF00171 Aldehyde dehydrogenase family NA29_RS10400 PF09339 IclR helix-turn-helix domain NA29_RS10400 PF01614 Bacterial transcriptional regulator NA29_RS10415 PF00392 Bacterial regulatory proteins, gntR family NA29_RS10415 PF07729 FCD domain NA29_RS10420 PF00266 Aminotransferase class-V NA29_RS10425 PF07690 Major Facilitator Superfamily NA29_RS10430 PF13183 4Fe-4S dicluster domain NA29_RS10430 PF02913 FAD linked oxidases, C-terminal domain NA29_RS10430 PF01565 FAD binding domain NA29_RS10435 PF14031 Putative serine dehydratase domain NA29_RS10435 PF01168 Alanine racemase, N-terminal domain NA29_RS10460 PF00892 EamA-like transporter family NA29_RS10490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10490 PF03459 TOBE domain NA29_RS10495 PF04891 NifQ NA29_RS10515 PF00583 Acetyltransferase (GNAT) family NA29_RS10530 PF01061 ABC-2 type transporter NA29_RS10535 PF00005 ABC transporter NA29_RS10550 PF03466 LysR substrate binding domain NA29_RS10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10565 PF01037 Lrp/AsnC ligand binding domain NA29_RS10570 PF07715 TonB-dependent Receptor Plug Domain NA29_RS10570 PF00593 TonB dependent receptor NA29_RS10580 PF02566 OsmC-like protein NA29_RS10590 PF04102 SlyX NA29_RS10595 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NA29_RS10605 PF07690 Major Facilitator Superfamily NA29_RS10610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10610 PF03466 LysR substrate binding domain NA29_RS10615 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS10615 PF00563 EAL domain NA29_RS10615 PF13185 GAF domain NA29_RS10620 PF01037 Lrp/AsnC ligand binding domain NA29_RS10625 PF01810 LysE type translocator NA29_RS10630 PF06481 COX Aromatic Rich Motif NA29_RS10630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NA29_RS10635 PF00115 Cytochrome C and Quinol oxidase polypeptide I NA29_RS10640 PF00510 Cytochrome c oxidase subunit III NA29_RS10645 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NA29_RS10650 PF00905 Penicillin binding protein transpeptidase domain NA29_RS10650 PF03717 Penicillin-binding Protein dimerisation domain NA29_RS10660 PF01810 LysE type translocator NA29_RS10680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10680 PF03466 LysR substrate binding domain NA29_RS10685 PF00578 AhpC/TSA family NA29_RS10690 PF01841 Transglutaminase-like superfamily NA29_RS10695 PF00586 AIR synthase related protein, N-terminal domain NA29_RS10695 PF02769 AIR synthase related protein, C-terminal domain NA29_RS10700 PF00561 alpha/beta hydrolase fold NA29_RS10705 PF00501 AMP-binding enzyme NA29_RS10705 PF13193 AMP-binding enzyme C-terminal domain NA29_RS10710 PF00171 Aldehyde dehydrogenase family NA29_RS10720 PF01202 Shikimate kinase NA29_RS10725 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS10735 PF00175 Oxidoreductase NAD-binding domain NA29_RS10735 PF00970 Oxidoreductase FAD-binding domain NA29_RS10735 PF00037 4Fe-4S binding domain NA29_RS10740 PF01965 DJ-1/PfpI family NA29_RS10750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10750 PF03466 LysR substrate binding domain NA29_RS10755 PF00107 Zinc-binding dehydrogenase NA29_RS10755 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS10760 PF00464 Serine hydroxymethyltransferase NA29_RS10765 PF03477 ATP cone domain NA29_RS10785 PF13609 Gram-negative porin NA29_RS10790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10790 PF03466 LysR substrate binding domain NA29_RS10800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NA29_RS10800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NA29_RS10805 PF00171 Aldehyde dehydrogenase family NA29_RS10835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10835 PF03466 LysR substrate binding domain NA29_RS10845 PF00005 ABC transporter NA29_RS10850 PF00005 ABC transporter NA29_RS10850 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS10860 PF02653 Branched-chain amino acid transport system / permease component NA29_RS10880 PF06052 3-hydroxyanthranilic acid dioxygenase NA29_RS10885 PF01042 Endoribonuclease L-PSP NA29_RS10890 PF00171 Aldehyde dehydrogenase family NA29_RS10905 PF00356 Bacterial regulatory proteins, lacI family NA29_RS10915 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS10920 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS10925 PF08402 TOBE domain NA29_RS10925 PF00005 ABC transporter NA29_RS10930 PF00149 Calcineurin-like phosphoesterase NA29_RS10935 PF00970 Oxidoreductase FAD-binding domain NA29_RS10935 PF00175 Oxidoreductase NAD-binding domain NA29_RS10935 PF00042 Globin NA29_RS10960 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NA29_RS10965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NA29_RS10965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NA29_RS10970 PF03466 LysR substrate binding domain NA29_RS10970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10975 PF00330 Aconitase family (aconitate hydratase) NA29_RS10980 PF00083 Sugar (and other) transporter NA29_RS10985 PF03848 Tellurite resistance protein TehB NA29_RS10990 PF03466 LysR substrate binding domain NA29_RS10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11000 PF01433 Peptidase family M1 domain NA29_RS11000 PF11940 Domain of unknown function (DUF3458) Ig-like fold NA29_RS11000 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NA29_RS11010 PF01169 Uncharacterized protein family UPF0016 NA29_RS11015 PF01979 Amidohydrolase family NA29_RS11020 PF00860 Permease family NA29_RS11025 PF00962 Adenosine/AMP deaminase NA29_RS11035 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NA29_RS11035 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS11040 PF01799 [2Fe-2S] binding domain NA29_RS11040 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS11045 PF03466 LysR substrate binding domain NA29_RS11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11050 PF02600 Disulfide bond formation protein DsbB NA29_RS11055 PF01425 Amidase NA29_RS11070 PF00999 Sodium/hydrogen exchanger family NA29_RS11070 PF02254 TrkA-N domain NA29_RS11080 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NA29_RS11085 PF00403 Heavy-metal-associated domain NA29_RS11090 PF00403 Heavy-metal-associated domain NA29_RS11095 PF03372 Endonuclease/Exonuclease/phosphatase family NA29_RS11100 PF09278 MerR, DNA binding NA29_RS11100 PF00376 MerR family regulatory protein NA29_RS11105 PF07715 TonB-dependent Receptor Plug Domain NA29_RS11105 PF00593 TonB dependent receptor NA29_RS11115 PF05643 Putative bacterial lipoprotein (DUF799) NA29_RS11125 PF03783 Curli production assembly/transport component CsgG NA29_RS11130 PF01566 Natural resistance-associated macrophage protein NA29_RS11145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NA29_RS11145 PF07733 Bacterial DNA polymerase III alpha NTPase domain NA29_RS11145 PF14579 Helix-hairpin-helix motif NA29_RS11145 PF02811 PHP domain NA29_RS11155 PF00860 Permease family NA29_RS11165 PF03707 Bacterial signalling protein N terminal repeat NA29_RS11165 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS11165 PF00563 EAL domain NA29_RS11170 PF01177 Asp/Glu/Hydantoin racemase NA29_RS11175 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS11180 PF01266 FAD dependent oxidoreductase NA29_RS11185 PF03466 LysR substrate binding domain NA29_RS11185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11195 PF00271 Helicase conserved C-terminal domain NA29_RS11195 PF00270 DEAD/DEAH box helicase NA29_RS11195 PF03880 DbpA RNA binding domain NA29_RS11200 PF05088 Bacterial NAD-glutamate dehydrogenase NA29_RS11205 PF07690 Major Facilitator Superfamily NA29_RS11215 PF00155 Aminotransferase class I and II NA29_RS11215 PF00392 Bacterial regulatory proteins, gntR family NA29_RS11225 PF00860 Permease family NA29_RS11230 PF13609 Gram-negative porin NA29_RS11245 PF02690 Na+/Pi-cotransporter NA29_RS11250 PF07690 Major Facilitator Superfamily NA29_RS11255 PF07690 Major Facilitator Superfamily NA29_RS11260 PF03971 Monomeric isocitrate dehydrogenase NA29_RS11285 PF00929 Exonuclease NA29_RS11290 PF00075 RNase H NA29_RS11300 PF16123 Hydroxyacylglutathione hydrolase C-terminus NA29_RS11300 PF00753 Metallo-beta-lactamase superfamily NA29_RS11305 PF01476 LysM domain NA29_RS11305 PF01464 Transglycosylase SLT domain NA29_RS11325 PF00005 ABC transporter NA29_RS11325 PF00664 ABC transporter transmembrane region NA29_RS11330 PF16177 Acetyl-coenzyme A synthetase N-terminus NA29_RS11330 PF00501 AMP-binding enzyme NA29_RS11330 PF13193 AMP-binding enzyme C-terminal domain NA29_RS11335 PF07690 Major Facilitator Superfamily NA29_RS11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11340 PF03466 LysR substrate binding domain NA29_RS11350 PF00083 Sugar (and other) transporter NA29_RS11350 PF08946 Osmosensory transporter coiled coil NA29_RS11390 PF04829 Pre-toxin domain with VENN motif NA29_RS11390 PF05860 haemagglutination activity domain NA29_RS11390 PF13332 Hemagglutinin repeat NA29_RS11390 PF13018 Extended Signal Peptide of Type V secretion system NA29_RS11395 PF08479 POTRA domain, ShlB-type NA29_RS11395 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NA29_RS11395 PF17287 POTRA domain NA29_RS11405 PF01494 FAD binding domain NA29_RS11410 PF00106 short chain dehydrogenase NA29_RS11415 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS11420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS11420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS11420 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS11425 PF13193 AMP-binding enzyme C-terminal domain NA29_RS11425 PF00501 AMP-binding enzyme NA29_RS11440 PF04115 Ureidoglycolate lyase NA29_RS11445 PF03561 Allantoicase repeat NA29_RS11450 PF00375 Sodium:dicarboxylate symporter family NA29_RS11460 PF01204 Trehalase NA29_RS11465 PF07729 FCD domain NA29_RS11465 PF00392 Bacterial regulatory proteins, gntR family NA29_RS11470 PF00117 Glutamine amidotransferase class-I NA29_RS11470 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NA29_RS11475 PF01810 LysE type translocator NA29_RS11480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NA29_RS11480 PF02142 MGS-like domain NA29_RS11480 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NA29_RS11485 PF01272 Transcription elongation factor, GreA/GreB, C-term NA29_RS11485 PF03449 Transcription elongation factor, N-terminal NA29_RS11495 PF01985 CRS1 / YhbY (CRM) domain NA29_RS11500 PF01728 FtsJ-like methyltransferase NA29_RS11505 PF06480 FtsH Extracellular NA29_RS11505 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS11505 PF17862 AAA+ lid domain NA29_RS11505 PF01434 Peptidase family M41 NA29_RS11510 PF00809 Pterin binding enzyme NA29_RS11515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NA29_RS11515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NA29_RS11515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NA29_RS11515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NA29_RS11520 PF12849 PBP superfamily domain NA29_RS11525 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS11530 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS11535 PF00005 ABC transporter NA29_RS11540 PF01895 PhoU domain NA29_RS11545 PF00072 Response regulator receiver domain NA29_RS11545 PF00486 Transcriptional regulatory protein, C terminal NA29_RS11550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS11550 PF11808 Phosphate regulon sensor protein PhoR NA29_RS11550 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS11550 PF00989 PAS fold NA29_RS11555 PF13089 Polyphosphate kinase N-terminal domain NA29_RS11555 PF02503 Polyphosphate kinase middle domain NA29_RS11555 PF13090 Polyphosphate kinase C-terminal domain 2 NA29_RS11555 PF17941 Polyphosphate kinase C-terminal domain 1 NA29_RS11560 PF02541 Ppx/GppA phosphatase family NA29_RS11570 PF00300 Histidine phosphatase superfamily (branch 1) NA29_RS11585 PF01527 Transposase NA29_RS11590 PF13683 Integrase core domain NA29_RS11590 PF13276 HTH-like domain NA29_RS11595 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH NA29_RS11610 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS11615 PF00005 ABC transporter NA29_RS11625 PF12802 MarR family NA29_RS11630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS11630 PF00034 Cytochrome c NA29_RS11630 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NA29_RS11635 PF00857 Isochorismatase family NA29_RS11645 PF00561 alpha/beta hydrolase fold NA29_RS11650 PF17645 Arylmalonate decarboxylase NA29_RS11655 PF01494 FAD binding domain NA29_RS11660 PF01799 [2Fe-2S] binding domain NA29_RS11660 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS11665 PF00034 Cytochrome c NA29_RS11665 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NA29_RS11665 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS11670 PF07690 Major Facilitator Superfamily NA29_RS11675 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NA29_RS11675 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NA29_RS11680 PF00591 Glycosyl transferase family, a/b domain NA29_RS11680 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NA29_RS11685 PF08546 Ketopantoate reductase PanE/ApbA C terminal NA29_RS11685 PF02558 Ketopantoate reductase PanE/ApbA NA29_RS11695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11695 PF03466 LysR substrate binding domain NA29_RS11715 PF00449 Urease alpha-subunit, N-terminal domain NA29_RS11715 PF01979 Amidohydrolase family NA29_RS11720 PF07683 Cobalamin synthesis protein cobW C-terminal domain NA29_RS11720 PF02492 CobW/HypB/UreG, nucleotide-binding domain NA29_RS11725 PF02653 Branched-chain amino acid transport system / permease component NA29_RS11730 PF11862 Domain of unknown function (DUF3382) NA29_RS11730 PF02653 Branched-chain amino acid transport system / permease component NA29_RS11735 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS11735 PF00005 ABC transporter NA29_RS11740 PF00005 ABC transporter NA29_RS11745 PF13458 Periplasmic binding protein NA29_RS11750 PF08946 Osmosensory transporter coiled coil NA29_RS11750 PF00083 Sugar (and other) transporter NA29_RS11755 PF00202 Aminotransferase class-III NA29_RS11770 PF00171 Aldehyde dehydrogenase family NA29_RS11780 PF01565 FAD binding domain NA29_RS11780 PF02913 FAD linked oxidases, C-terminal domain NA29_RS11785 PF12792 CSS motif domain associated with EAL NA29_RS11785 PF00563 EAL domain NA29_RS11790 PF00392 Bacterial regulatory proteins, gntR family NA29_RS11790 PF07729 FCD domain NA29_RS11800 PF00005 ABC transporter NA29_RS11805 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS11815 PF02615 Malate/L-lactate dehydrogenase NA29_RS11820 PF01042 Endoribonuclease L-PSP NA29_RS11825 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS11840 PF01425 Amidase NA29_RS11845 PF07690 Major Facilitator Superfamily NA29_RS11855 PF00171 Aldehyde dehydrogenase family NA29_RS11860 PF03928 Haem-degrading NA29_RS11865 PF00175 Oxidoreductase NAD-binding domain NA29_RS11875 PF00175 Oxidoreductase NAD-binding domain NA29_RS11875 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS11875 PF00970 Oxidoreductase FAD-binding domain NA29_RS11880 PF07859 alpha/beta hydrolase fold NA29_RS11885 PF07729 FCD domain NA29_RS11885 PF00392 Bacterial regulatory proteins, gntR family NA29_RS11890 PF01297 Zinc-uptake complex component A periplasmic NA29_RS11895 PF01979 Amidohydrolase family NA29_RS11905 PF07690 Major Facilitator Superfamily NA29_RS11920 PF00924 Mechanosensitive ion channel NA29_RS11930 PF13609 Gram-negative porin NA29_RS11935 PF01165 Ribosomal protein S21 NA29_RS11970 PF13609 Gram-negative porin NA29_RS11975 PF07702 UTRA domain NA29_RS11975 PF00392 Bacterial regulatory proteins, gntR family NA29_RS11980 PF13458 Periplasmic binding protein NA29_RS11985 PF02653 Branched-chain amino acid transport system / permease component NA29_RS11990 PF11862 Domain of unknown function (DUF3382) NA29_RS11990 PF02653 Branched-chain amino acid transport system / permease component NA29_RS11995 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS11995 PF00005 ABC transporter NA29_RS12000 PF00005 ABC transporter NA29_RS12005 PF00330 Aconitase family (aconitate hydratase) NA29_RS12010 PF00694 Aconitase C-terminal domain NA29_RS12015 PF02538 Hydantoinase B/oxoprolinase NA29_RS12020 PF05378 Hydantoinase/oxoprolinase N-terminal region NA29_RS12020 PF01968 Hydantoinase/oxoprolinase NA29_RS12025 PF00857 Isochorismatase family NA29_RS12040 PF02515 CoA-transferase family III NA29_RS12045 PF02272 DHHA1 domain NA29_RS12045 PF01411 tRNA synthetases class II (A) NA29_RS12045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NA29_RS12050 PF06779 Uncharacterised MFS-type transporter YbfB NA29_RS12055 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS12060 PF01361 Tautomerase enzyme NA29_RS12065 PF01212 Beta-eliminating lyase NA29_RS12070 PF00654 Voltage gated chloride channel NA29_RS12075 PF13344 Haloacid dehalogenase-like hydrolase NA29_RS12075 PF00293 NUDIX domain NA29_RS12080 PF01206 Sulfurtransferase TusA NA29_RS12085 PF00483 Nucleotidyl transferase NA29_RS12090 PF08264 Anticodon-binding domain of tRNA NA29_RS12090 PF00133 tRNA synthetases class I (I, L, M and V) NA29_RS12090 PF10458 Valyl tRNA synthetase tRNA binding arm NA29_RS12095 PF13361 UvrD-like helicase C-terminal domain NA29_RS12095 PF00580 UvrD/REP helicase N-terminal domain NA29_RS12105 PF01636 Phosphotransferase enzyme family NA29_RS12115 PF04143 Sulphur transport NA29_RS12120 PF03641 Possible lysine decarboxylase NA29_RS12125 PF01367 5'-3' exonuclease, C-terminal SAM fold NA29_RS12125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NA29_RS12125 PF01612 3'-5' exonuclease NA29_RS12125 PF00476 DNA polymerase family A NA29_RS12130 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS12135 PF01738 Dienelactone hydrolase family NA29_RS12145 PF00581 Rhodanese-like domain NA29_RS12160 PF02609 Exonuclease VII small subunit NA29_RS12165 PF00348 Polyprenyl synthetase NA29_RS12170 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NA29_RS12170 PF02779 Transketolase, pyrimidine binding domain NA29_RS12170 PF02780 Transketolase, C-terminal domain NA29_RS12175 PF02649 Type I GTP cyclohydrolase folE2 NA29_RS12180 PF00814 Glycoprotease family NA29_RS12190 PF09424 Yqey-like protein NA29_RS12195 PF10410 DnaB-helicase binding domain of primase NA29_RS12195 PF08278 DNA primase DnaG DnaB-binding NA29_RS12195 PF08275 DNA primase catalytic core, N-terminal domain NA29_RS12195 PF01807 CHC2 zinc finger NA29_RS12205 PF04539 Sigma-70 region 3 NA29_RS12205 PF04545 Sigma-70, region 4 NA29_RS12205 PF04542 Sigma-70 region 2 NA29_RS12205 PF00140 Sigma-70 factor, region 1.2 NA29_RS12205 PF03979 Sigma-70 factor, region 1.1 NA29_RS12205 PF04546 Sigma-70, non-essential region NA29_RS12215 PF04371 Porphyromonas-type peptidyl-arginine deiminase NA29_RS12220 PF03466 LysR substrate binding domain NA29_RS12220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS12230 PF03466 LysR substrate binding domain NA29_RS12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS12240 PF04542 Sigma-70 region 2 NA29_RS12240 PF08281 Sigma-70, region 4 NA29_RS12240 PF12680 SnoaL-like domain NA29_RS12245 PF16123 Hydroxyacylglutathione hydrolase C-terminus NA29_RS12245 PF00753 Metallo-beta-lactamase superfamily NA29_RS12250 PF02203 Tar ligand binding domain homologue NA29_RS12250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS12250 PF00672 HAMP domain NA29_RS12260 PF00672 HAMP domain NA29_RS12260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS12260 PF02203 Tar ligand binding domain homologue NA29_RS12265 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NA29_RS12265 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NA29_RS12270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS12270 PF03466 LysR substrate binding domain NA29_RS12280 PF12792 CSS motif domain associated with EAL NA29_RS12280 PF00563 EAL domain NA29_RS12295 PF07690 Major Facilitator Superfamily NA29_RS12300 PF07690 Major Facilitator Superfamily NA29_RS12305 PF00067 Cytochrome P450 NA29_RS12320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NA29_RS12325 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NA29_RS12325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NA29_RS12330 PF00920 Dehydratase family NA29_RS12340 PF07690 Major Facilitator Superfamily NA29_RS12345 PF03466 LysR substrate binding domain NA29_RS12345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS12350 PF00106 short chain dehydrogenase NA29_RS12355 PF01965 DJ-1/PfpI family NA29_RS12355 PF12833 Helix-turn-helix domain NA29_RS12365 PF03180 NLPA lipoprotein NA29_RS12370 PF02954 Bacterial regulatory protein, Fis family NA29_RS12370 PF06506 Propionate catabolism activator NA29_RS12370 PF00158 Sigma-54 interaction domain NA29_RS12380 PF00285 Citrate synthase, C-terminal domain NA29_RS12385 PF00330 Aconitase family (aconitate hydratase) NA29_RS12385 PF00694 Aconitase C-terminal domain NA29_RS12390 PF04303 PrpF protein NA29_RS12395 PF03972 MmgE/PrpD family NA29_RS12405 PF07690 Major Facilitator Superfamily NA29_RS12410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS12410 PF03466 LysR substrate binding domain NA29_RS12415 PF02595 Glycerate kinase family NA29_RS12425 PF00455 DeoR C terminal sensor domain NA29_RS12425 PF08220 DeoR-like helix-turn-helix domain NA29_RS12430 PF01266 FAD dependent oxidoreductase NA29_RS12430 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NA29_RS12435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NA29_RS12435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NA29_RS12440 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS12450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS12450 PF03466 LysR substrate binding domain NA29_RS12455 PF02321 Outer membrane efflux protein NA29_RS12465 PF00005 ABC transporter NA29_RS12470 PF13533 Biotin-lipoyl like NA29_RS12475 PF01227 GTP cyclohydrolase I NA29_RS12485 PF02322 Cytochrome bd terminal oxidase subunit II NA29_RS12490 PF01654 Cytochrome bd terminal oxidase subunit I NA29_RS12510 PF07690 Major Facilitator Superfamily NA29_RS12515 PF03466 LysR substrate binding domain NA29_RS12515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS12520 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS12530 PF01292 Prokaryotic cytochrome b561 NA29_RS12545 PF00581 Rhodanese-like domain NA29_RS12570 PF03069 Acetamidase/Formamidase family NA29_RS12580 PF04542 Sigma-70 region 2 NA29_RS12580 PF08281 Sigma-70, region 4 NA29_RS12585 PF00199 Catalase NA29_RS12595 PF01464 Transglycosylase SLT domain NA29_RS12605 PF07963 Prokaryotic N-terminal methylation motif NA29_RS12605 PF08334 Type II secretion system (T2SS), protein G NA29_RS12610 PF08334 Type II secretion system (T2SS), protein G NA29_RS12610 PF07963 Prokaryotic N-terminal methylation motif NA29_RS12615 PF03958 Bacterial type II/III secretion system short domain NA29_RS12615 PF00263 Bacterial type II and III secretion system protein NA29_RS12640 PF00437 Type II/IV secretion system protein NA29_RS12645 PF00482 Type II secretion system (T2SS), protein F NA29_RS12650 PF07963 Prokaryotic N-terminal methylation motif NA29_RS12650 PF08334 Type II secretion system (T2SS), protein G NA29_RS12660 PF08281 Sigma-70, region 4 NA29_RS12660 PF04542 Sigma-70 region 2 NA29_RS12670 PF00067 Cytochrome P450 NA29_RS12680 PF00072 Response regulator receiver domain NA29_RS12680 PF00486 Transcriptional regulatory protein, C terminal NA29_RS12685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS12685 PF03466 LysR substrate binding domain NA29_RS12695 PF08402 TOBE domain NA29_RS12695 PF00005 ABC transporter NA29_RS12700 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS12705 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS12710 PF01266 FAD dependent oxidoreductase NA29_RS12720 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS12720 PF04324 BFD-like [2Fe-2S] binding domain NA29_RS12730 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS12730 PF00989 PAS fold NA29_RS12730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS12735 PF00072 Response regulator receiver domain NA29_RS12735 PF00196 Bacterial regulatory proteins, luxR family NA29_RS12745 PF17158 Membrane-associated sensor, integral membrane domain NA29_RS12745 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS12760 PF03621 MbtH-like protein NA29_RS12765 PF00975 Thioesterase domain NA29_RS12775 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NA29_RS12780 PF00005 ABC transporter NA29_RS12780 PF00664 ABC transporter transmembrane region NA29_RS12785 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NA29_RS12790 PF00550 Phosphopantetheine attachment site NA29_RS12790 PF00668 Condensation domain NA29_RS12790 PF13193 AMP-binding enzyme C-terminal domain NA29_RS12790 PF00501 AMP-binding enzyme NA29_RS12795 PF00501 AMP-binding enzyme NA29_RS12795 PF00668 Condensation domain NA29_RS12795 PF00550 Phosphopantetheine attachment site NA29_RS12795 PF13193 AMP-binding enzyme C-terminal domain NA29_RS12800 PF00550 Phosphopantetheine attachment site NA29_RS12800 PF00668 Condensation domain NA29_RS12800 PF13193 AMP-binding enzyme C-terminal domain NA29_RS12800 PF07993 Male sterility protein NA29_RS12800 PF00501 AMP-binding enzyme NA29_RS12805 PF00593 TonB dependent receptor NA29_RS12805 PF07715 TonB-dependent Receptor Plug Domain NA29_RS12810 PF01804 Penicillin amidase NA29_RS12815 PF00005 ABC transporter NA29_RS12820 PF01032 FecCD transport family NA29_RS12825 PF01497 Periplasmic binding protein NA29_RS12860 PF00501 AMP-binding enzyme NA29_RS12865 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS12865 PF00005 ABC transporter NA29_RS12870 PF02653 Branched-chain amino acid transport system / permease component NA29_RS12885 PF00005 ABC transporter NA29_RS12895 PF07690 Major Facilitator Superfamily NA29_RS12900 PF00440 Bacterial regulatory proteins, tetR family NA29_RS12900 PF18665 Tetracyclin repressor-like, C-terminal domain NA29_RS12905 PF14480 DNA polymerase III polC-type N-terminus I NA29_RS12905 PF14579 Helix-hairpin-helix motif NA29_RS12905 PF07733 Bacterial DNA polymerase III alpha NTPase domain NA29_RS12905 PF00929 Exonuclease NA29_RS12905 PF02811 PHP domain NA29_RS12905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NA29_RS12905 PF11490 DNA polymerase III polC-type N-terminus II NA29_RS12910 PF00330 Aconitase family (aconitate hydratase) NA29_RS12910 PF11791 Aconitate B N-terminal domain NA29_RS12910 PF06434 Aconitate hydratase 2 N-terminus NA29_RS12915 PF12833 Helix-turn-helix domain NA29_RS12920 PF00083 Sugar (and other) transporter NA29_RS12920 PF08946 Osmosensory transporter coiled coil NA29_RS12925 PF02910 Fumarate reductase flavoprotein C-term NA29_RS12925 PF00890 FAD binding domain NA29_RS12935 PF02754 Cysteine-rich domain NA29_RS12940 PF00072 Response regulator receiver domain NA29_RS12940 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS12945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS12945 PF00072 Response regulator receiver domain NA29_RS12945 PF01627 Hpt domain NA29_RS12945 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS12955 PF11862 Domain of unknown function (DUF3382) NA29_RS12955 PF02653 Branched-chain amino acid transport system / permease component NA29_RS12965 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS12965 PF00005 ABC transporter NA29_RS12970 PF00005 ABC transporter NA29_RS12985 PF00795 Carbon-nitrogen hydrolase NA29_RS13005 PF00355 Rieske [2Fe-2S] domain NA29_RS13010 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS13010 PF14759 Reductase C-terminal NA29_RS13015 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NA29_RS13015 PF00355 Rieske [2Fe-2S] domain NA29_RS13020 PF13577 SnoaL-like domain NA29_RS13025 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS13025 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NA29_RS13030 PF00941 FAD binding domain in molybdopterin dehydrogenase NA29_RS13030 PF03450 CO dehydrogenase flavoprotein C-terminal domain NA29_RS13035 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS13035 PF01799 [2Fe-2S] binding domain NA29_RS13045 PF17645 Arylmalonate decarboxylase NA29_RS13050 PF00561 alpha/beta hydrolase fold NA29_RS13060 PF00857 Isochorismatase family NA29_RS13065 PF00083 Sugar (and other) transporter NA29_RS13065 PF07690 Major Facilitator Superfamily NA29_RS13070 PF01047 MarR family NA29_RS13075 PF07690 Major Facilitator Superfamily NA29_RS13080 PF02625 XdhC and CoxI family NA29_RS13080 PF13478 XdhC Rossmann domain NA29_RS13090 PF13193 AMP-binding enzyme C-terminal domain NA29_RS13090 PF00501 AMP-binding enzyme NA29_RS13095 PF06969 HemN C-terminal domain NA29_RS13095 PF04055 Radical SAM superfamily NA29_RS13100 PF01725 Ham1 family NA29_RS13105 PF03725 3' exoribonuclease family, domain 2 NA29_RS13105 PF01138 3' exoribonuclease family, domain 1 NA29_RS13110 PF08340 Domain of unknown function (DUF1732) NA29_RS13110 PF03755 YicC-like family, N-terminal region NA29_RS13115 PF00625 Guanylate kinase NA29_RS13120 PF01192 RNA polymerase Rpb6 NA29_RS13125 PF02824 TGS domain NA29_RS13125 PF13291 ACT domain NA29_RS13125 PF04607 Region found in RelA / SpoT proteins NA29_RS13130 PF03449 Transcription elongation factor, N-terminal NA29_RS13130 PF01272 Transcription elongation factor, GreA/GreB, C-term NA29_RS13135 PF05726 Pirin C-terminal cupin domain NA29_RS13135 PF02678 Pirin NA29_RS13145 PF00085 Thioredoxin NA29_RS13160 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS13165 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS13170 PF03814 Potassium-transporting ATPase A subunit NA29_RS13180 PF02669 K+-transporting ATPase, c chain NA29_RS13185 PF13492 GAF domain NA29_RS13185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS13185 PF02702 Osmosensitive K+ channel His kinase sensor domain NA29_RS13185 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS13185 PF13493 Domain of unknown function (DUF4118) NA29_RS13190 PF00072 Response regulator receiver domain NA29_RS13190 PF00486 Transcriptional regulatory protein, C terminal NA29_RS13195 PF00893 Small Multidrug Resistance protein NA29_RS13210 PF01152 Bacterial-like globin NA29_RS13225 PF02272 DHHA1 domain NA29_RS13225 PF01411 tRNA synthetases class II (A) NA29_RS13225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NA29_RS13240 PF03641 Possible lysine decarboxylase NA29_RS13245 PF08359 YsiA-like protein, C-terminal region NA29_RS13245 PF00440 Bacterial regulatory proteins, tetR family NA29_RS13250 PF01219 Prokaryotic diacylglycerol kinase NA29_RS13255 PF13439 Glycosyltransferase Family 4 NA29_RS13255 PF00534 Glycosyl transferases group 1 NA29_RS13290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS13290 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS13290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS13295 PF10369 Small subunit of acetolactate synthase NA29_RS13300 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NA29_RS13300 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NA29_RS13305 PF02666 Phosphatidylserine decarboxylase NA29_RS13310 PF01066 CDP-alcohol phosphatidyltransferase NA29_RS13315 PF01476 LysM domain NA29_RS13315 PF04972 BON domain NA29_RS13320 PF08502 LeuA allosteric (dimerisation) domain NA29_RS13320 PF00682 HMGL-like NA29_RS13340 PF08281 Sigma-70, region 4 NA29_RS13340 PF04542 Sigma-70 region 2 NA29_RS13350 PF13458 Periplasmic binding protein NA29_RS13355 PF00312 Ribosomal protein S15 NA29_RS13360 PF03725 3' exoribonuclease family, domain 2 NA29_RS13360 PF00575 S1 RNA binding domain NA29_RS13360 PF01138 3' exoribonuclease family, domain 1 NA29_RS13360 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NA29_RS13360 PF00013 KH domain NA29_RS13385 PF13378 Enolase C-terminal domain-like NA29_RS13385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NA29_RS13405 PF01554 MatE NA29_RS13415 PF01197 Ribosomal protein L31 NA29_RS13425 PF07690 Major Facilitator Superfamily NA29_RS13440 PF02913 FAD linked oxidases, C-terminal domain NA29_RS13440 PF01565 FAD binding domain NA29_RS13450 PF03358 NADPH-dependent FMN reductase NA29_RS13455 PF03631 Virulence factor BrkB NA29_RS13465 PF12697 Alpha/beta hydrolase family NA29_RS13470 PF01053 Cys/Met metabolism PLP-dependent enzyme NA29_RS13480 PF07690 Major Facilitator Superfamily NA29_RS13485 PF01264 Chorismate synthase NA29_RS13505 PF03480 Bacterial extracellular solute-binding protein, family 7 NA29_RS13515 PF00072 Response regulator receiver domain NA29_RS13515 PF00196 Bacterial regulatory proteins, luxR family NA29_RS13520 PF01144 Coenzyme A transferase NA29_RS13525 PF01144 Coenzyme A transferase NA29_RS13530 PF00106 short chain dehydrogenase NA29_RS13540 PF01042 Endoribonuclease L-PSP NA29_RS13545 PF04607 Region found in RelA / SpoT proteins NA29_RS13545 PF02824 TGS domain NA29_RS13545 PF13291 ACT domain NA29_RS13555 PF03129 Anticodon binding domain NA29_RS13555 PF02824 TGS domain NA29_RS13555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NA29_RS13555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NA29_RS13560 PF05198 Translation initiation factor IF-3, N-terminal domain NA29_RS13560 PF00707 Translation initiation factor IF-3, C-terminal domain NA29_RS13565 PF01632 Ribosomal protein L35 NA29_RS13570 PF00453 Ribosomal protein L20 NA29_RS13575 PF01409 tRNA synthetases class II core domain (F) NA29_RS13575 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NA29_RS13580 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NA29_RS13580 PF01588 Putative tRNA binding domain NA29_RS13580 PF03147 Ferredoxin-fold anticodon binding domain NA29_RS13580 PF03483 B3/4 domain NA29_RS13580 PF03484 tRNA synthetase B5 domain NA29_RS13585 PF00216 Bacterial DNA-binding protein NA29_RS13595 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS13595 PF00563 EAL domain NA29_RS13595 PF03707 Bacterial signalling protein N terminal repeat NA29_RS13595 PF13188 PAS domain NA29_RS13600 PF17151 Periplasmic sensor domain NA29_RS13600 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS13610 PF00301 Rubredoxin NA29_RS13635 PF13426 PAS domain NA29_RS13635 PF00563 EAL domain NA29_RS13635 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS13645 PF06736 Protein of unknown function (DUF1211) NA29_RS13650 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS13650 PF05230 MASE2 domain NA29_RS13655 PF01613 Flavin reductase like domain NA29_RS13665 PF00561 alpha/beta hydrolase fold NA29_RS13680 PF00005 ABC transporter NA29_RS13680 PF08402 TOBE domain NA29_RS13685 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS13690 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS13700 PF04324 BFD-like [2Fe-2S] binding domain NA29_RS13700 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS13705 PF01266 FAD dependent oxidoreductase NA29_RS13715 PF00563 EAL domain NA29_RS13715 PF04940 Sensors of blue-light using FAD NA29_RS13725 PF01590 GAF domain NA29_RS13725 PF00563 EAL domain NA29_RS13725 PF00360 Phytochrome region NA29_RS13725 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS13740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NA29_RS13740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NA29_RS13755 PF03707 Bacterial signalling protein N terminal repeat NA29_RS13755 PF00563 EAL domain NA29_RS13755 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS13895 PF00501 AMP-binding enzyme NA29_RS13895 PF13193 AMP-binding enzyme C-terminal domain NA29_RS13905 PF04262 Glutamate-cysteine ligase NA29_RS13920 PF17092 Penicillin-binding protein OB-like domain NA29_RS13920 PF00912 Transglycosylase NA29_RS13920 PF00905 Penicillin binding protein transpeptidase domain NA29_RS13925 PF01810 LysE type translocator NA29_RS13935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS13935 PF00672 HAMP domain NA29_RS13935 PF02203 Tar ligand binding domain homologue NA29_RS13945 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NA29_RS13945 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NA29_RS13950 PF00175 Oxidoreductase NAD-binding domain NA29_RS13950 PF00667 FAD binding domain NA29_RS13950 PF00258 Flavodoxin NA29_RS13955 PF00676 Dehydrogenase E1 component NA29_RS13955 PF16870 2-oxoglutarate dehydrogenase C-terminal NA29_RS13955 PF16078 2-oxoglutarate dehydrogenase N-terminus NA29_RS13955 PF02779 Transketolase, pyrimidine binding domain NA29_RS13960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NA29_RS13960 PF00364 Biotin-requiring enzyme NA29_RS13960 PF02817 e3 binding domain NA29_RS13965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NA29_RS13965 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS13970 PF03969 AFG1-like ATPase NA29_RS14045 PF00263 Bacterial type II and III secretion system protein NA29_RS14045 PF04972 BON domain NA29_RS14045 PF13629 Pilus formation protein N terminal region NA29_RS14055 PF00437 Type II/IV secretion system protein NA29_RS14085 PF06490 Flagellar regulatory protein FleQ NA29_RS14085 PF02954 Bacterial regulatory protein, Fis family NA29_RS14085 PF00158 Sigma-54 interaction domain NA29_RS14095 PF02705 K+ potassium transporter NA29_RS14100 PF16921 Tex protein YqgF-like domain NA29_RS14100 PF09371 Tex-like protein N-terminal domain NA29_RS14100 PF00575 S1 RNA binding domain NA29_RS14100 PF17674 HHH domain NA29_RS14115 PF06733 DEAD_2 NA29_RS14115 PF13307 Helicase C-terminal domain NA29_RS14120 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NA29_RS14120 PF00117 Glutamine amidotransferase class-I NA29_RS14125 PF13525 Outer membrane lipoprotein NA29_RS14130 PF01479 S4 domain NA29_RS14130 PF00849 RNA pseudouridylate synthase NA29_RS14135 PF02578 Multi-copper polyphenol oxidoreductase laccase NA29_RS14145 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NA29_RS14150 PF02803 Thiolase, C-terminal domain NA29_RS14150 PF00108 Thiolase, N-terminal domain NA29_RS14155 PF00106 short chain dehydrogenase NA29_RS14160 PF07879 PHB/PHA accumulation regulator DNA-binding domain NA29_RS14160 PF05233 PHB accumulation regulatory domain NA29_RS14165 PF04055 Radical SAM superfamily NA29_RS14165 PF00919 Uncharacterized protein family UPF0004 NA29_RS14165 PF18693 TRAM domain NA29_RS14170 PF00294 pfkB family carbohydrate kinase NA29_RS14175 PF02803 Thiolase, C-terminal domain NA29_RS14175 PF00108 Thiolase, N-terminal domain NA29_RS14180 PF01053 Cys/Met metabolism PLP-dependent enzyme NA29_RS14205 PF01965 DJ-1/PfpI family NA29_RS14215 PF02423 Ornithine cyclodeaminase/mu-crystallin family NA29_RS14220 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS14225 PF07690 Major Facilitator Superfamily NA29_RS14230 PF01546 Peptidase family M20/M25/M40 NA29_RS14230 PF07687 Peptidase dimerisation domain NA29_RS14235 PF00270 DEAD/DEAH box helicase NA29_RS14235 PF17757 UvrB interaction domain NA29_RS14235 PF03461 TRCF domain NA29_RS14235 PF00271 Helicase conserved C-terminal domain NA29_RS14235 PF02559 CarD-like/TRCF domain NA29_RS14240 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NA29_RS14245 PF02542 YgbB family NA29_RS14250 PF02627 Carboxymuconolactone decarboxylase family NA29_RS14255 PF00578 AhpC/TSA family NA29_RS14260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS14260 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS14260 PF00672 HAMP domain NA29_RS14265 PF00486 Transcriptional regulatory protein, C terminal NA29_RS14265 PF00072 Response regulator receiver domain NA29_RS14325 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NA29_RS14330 PF00893 Small Multidrug Resistance protein NA29_RS14340 PF00127 Copper binding proteins, plastocyanin/azurin family NA29_RS14345 PF03466 LysR substrate binding domain NA29_RS14345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS14350 PF07690 Major Facilitator Superfamily NA29_RS14355 PF05726 Pirin C-terminal cupin domain NA29_RS14355 PF02678 Pirin NA29_RS14360 PF00593 TonB dependent receptor NA29_RS14360 PF07715 TonB-dependent Receptor Plug Domain NA29_RS14375 PF00557 Metallopeptidase family M24 NA29_RS14395 PF02321 Outer membrane efflux protein NA29_RS14400 PF00873 AcrB/AcrD/AcrF family NA29_RS14405 PF13533 Biotin-lipoyl like NA29_RS14410 PF07859 alpha/beta hydrolase fold NA29_RS14415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS14415 PF03466 LysR substrate binding domain NA29_RS14420 PF00583 Acetyltransferase (GNAT) family NA29_RS14430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NA29_RS14430 PF02875 Mur ligase family, glutamate ligase domain NA29_RS14430 PF08245 Mur ligase middle domain NA29_RS14435 PF02875 Mur ligase family, glutamate ligase domain NA29_RS14435 PF08245 Mur ligase middle domain NA29_RS14435 PF08443 RimK-like ATP-grasp domain NA29_RS14440 PF00005 ABC transporter NA29_RS14440 PF00664 ABC transporter transmembrane region NA29_RS14450 PF04381 Putative exonuclease, RdgC NA29_RS14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS14465 PF03466 LysR substrate binding domain NA29_RS14480 PF03775 Septum formation inhibitor MinC, C-terminal domain NA29_RS14480 PF05209 Septum formation inhibitor MinC, N-terminal domain NA29_RS14485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NA29_RS14490 PF03776 Septum formation topological specificity factor MinE NA29_RS14500 PF13193 AMP-binding enzyme C-terminal domain NA29_RS14500 PF00501 AMP-binding enzyme NA29_RS14505 PF02803 Thiolase, C-terminal domain NA29_RS14505 PF00108 Thiolase, N-terminal domain NA29_RS14520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS14520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS14520 PF09317 Domain of unknown function (DUF1974) NA29_RS14525 PF00440 Bacterial regulatory proteins, tetR family NA29_RS14530 PF05698 Bacterial trigger factor protein (TF) C-terminus NA29_RS14530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NA29_RS14530 PF05697 Bacterial trigger factor protein (TF) NA29_RS14535 PF00574 Clp protease NA29_RS14540 PF06689 ClpX C4-type zinc finger NA29_RS14540 PF07724 AAA domain (Cdc48 subfamily) NA29_RS14540 PF10431 C-terminal, D2-small domain, of ClpB protein NA29_RS14545 PF05362 Lon protease (S16) C-terminal proteolytic domain NA29_RS14545 PF02190 ATP-dependent protease La (LON) substrate-binding domain NA29_RS14545 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS14550 PF00216 Bacterial DNA-binding protein NA29_RS14565 PF05698 Bacterial trigger factor protein (TF) C-terminus NA29_RS14570 PF13472 GDSL-like Lipase/Acylhydrolase family NA29_RS14575 PF00005 ABC transporter NA29_RS14580 PF00342 Phosphoglucose isomerase NA29_RS14585 PF03853 YjeF-related protein N-terminus NA29_RS14585 PF01256 Carbohydrate kinase NA29_RS14590 PF01266 FAD dependent oxidoreductase NA29_RS14595 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NA29_RS14595 PF02769 AIR synthase related protein, C-terminal domain NA29_RS14595 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NA29_RS14605 PF01722 BolA-like protein NA29_RS14610 PF04279 Intracellular septation protein A NA29_RS14620 PF01641 SelR domain NA29_RS14625 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NA29_RS14630 PF13193 AMP-binding enzyme C-terminal domain NA29_RS14630 PF00501 AMP-binding enzyme NA29_RS14635 PF02653 Branched-chain amino acid transport system / permease component NA29_RS14645 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS14645 PF00005 ABC transporter NA29_RS14650 PF00005 ABC transporter NA29_RS14655 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NA29_RS14655 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS14655 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NA29_RS14660 PF00857 Isochorismatase family NA29_RS14670 PF00107 Zinc-binding dehydrogenase NA29_RS14670 PF16884 N-terminal domain of oxidoreductase NA29_RS14685 PF01571 Aminomethyltransferase folate-binding domain NA29_RS14690 PF02618 YceG-like family NA29_RS14695 PF02223 Thymidylate kinase NA29_RS14700 PF09115 DNA polymerase III, delta subunit, C terminal NA29_RS14705 PF01026 TatD related DNase NA29_RS14715 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS14720 PF00982 Glycosyltransferase family 20 NA29_RS14725 PF02358 Trehalose-phosphatase NA29_RS14730 PF00667 FAD binding domain NA29_RS14730 PF00258 Flavodoxin NA29_RS14730 PF00175 Oxidoreductase NAD-binding domain NA29_RS14735 PF00708 Acylphosphatase NA29_RS14740 PF02203 Tar ligand binding domain homologue NA29_RS14740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS14740 PF00672 HAMP domain NA29_RS14745 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS14745 PF00072 Response regulator receiver domain NA29_RS14745 PF09456 RcsC Alpha-Beta-Loop (ABL) NA29_RS14745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS14750 PF03006 Haemolysin-III related NA29_RS14755 PF00578 AhpC/TSA family NA29_RS14760 PF01037 Lrp/AsnC ligand binding domain NA29_RS14765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS14765 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS14765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS14770 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS14775 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS14780 PF00005 ABC transporter NA29_RS14785 PF00202 Aminotransferase class-III NA29_RS14790 PF04958 Arginine N-succinyltransferase beta subunit NA29_RS14800 PF00577 Outer membrane usher protein NA29_RS14800 PF13953 PapC C-terminal domain NA29_RS14800 PF13954 PapC N-terminal domain NA29_RS14820 PF00210 Ferritin-like domain NA29_RS14825 PF13380 CoA binding domain NA29_RS14825 PF00583 Acetyltransferase (GNAT) family NA29_RS14825 PF13607 Succinyl-CoA ligase like flavodoxin domain NA29_RS14830 PF01544 CorA-like Mg2+ transporter protein NA29_RS14835 PF02515 CoA-transferase family III NA29_RS14840 PF01925 Sulfite exporter TauE/SafE NA29_RS14850 PF00196 Bacterial regulatory proteins, luxR family NA29_RS14850 PF00072 Response regulator receiver domain NA29_RS14855 PF09456 RcsC Alpha-Beta-Loop (ABL) NA29_RS14855 PF00072 Response regulator receiver domain NA29_RS14855 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS14855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS14860 PF03466 LysR substrate binding domain NA29_RS14865 PF04209 homogentisate 1,2-dioxygenase NA29_RS14875 PF01594 AI-2E family transporter NA29_RS14885 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NA29_RS14890 PF00171 Aldehyde dehydrogenase family NA29_RS14895 PF04996 Succinylarginine dihydrolase NA29_RS14900 PF03358 NADPH-dependent FMN reductase NA29_RS14920 PF01209 ubiE/COQ5 methyltransferase family NA29_RS14930 PF05175 Methyltransferase small domain NA29_RS14950 PF03170 Bacterial cellulose synthase subunit NA29_RS14955 PF01270 Glycosyl hydrolases family 8 NA29_RS14960 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) NA29_RS14960 PF13181 Tetratricopeptide repeat NA29_RS14970 PF07238 PilZ domain NA29_RS14970 PF00535 Glycosyl transferase family 2 NA29_RS14975 PF11658 Cellulose biosynthesis protein BcsG NA29_RS14980 PF00248 Aldo/keto reductase family NA29_RS14990 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS14990 PF14759 Reductase C-terminal NA29_RS14995 PF07690 Major Facilitator Superfamily NA29_RS15005 PF02321 Outer membrane efflux protein NA29_RS15010 PF00873 AcrB/AcrD/AcrF family NA29_RS15015 PF13533 Biotin-lipoyl like NA29_RS15020 PF00106 short chain dehydrogenase NA29_RS15030 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NA29_RS15030 PF00561 alpha/beta hydrolase fold NA29_RS15040 PF01569 PAP2 superfamily NA29_RS15045 PF01757 Acyltransferase family NA29_RS15050 PF00563 EAL domain NA29_RS15050 PF03707 Bacterial signalling protein N terminal repeat NA29_RS15050 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS15070 PF04542 Sigma-70 region 2 NA29_RS15070 PF08281 Sigma-70, region 4 NA29_RS15080 PF13649 Methyltransferase domain NA29_RS15085 PF00654 Voltage gated chloride channel NA29_RS15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS15090 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS15090 PF00672 HAMP domain NA29_RS15095 PF00486 Transcriptional regulatory protein, C terminal NA29_RS15095 PF00072 Response regulator receiver domain NA29_RS15105 PF01032 FecCD transport family NA29_RS15110 PF00005 ABC transporter NA29_RS15115 PF07715 TonB-dependent Receptor Plug Domain NA29_RS15115 PF00593 TonB dependent receptor NA29_RS15120 PF13640 2OG-Fe(II) oxygenase superfamily NA29_RS15120 PF18331 PKHD-type hydroxylase C-terminal domain NA29_RS15130 PF03466 LysR substrate binding domain NA29_RS15130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15140 PF03466 LysR substrate binding domain NA29_RS15140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15150 PF00753 Metallo-beta-lactamase superfamily NA29_RS15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15160 PF03466 LysR substrate binding domain NA29_RS15185 PF03466 LysR substrate binding domain NA29_RS15185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15190 PF06441 Epoxide hydrolase N terminus NA29_RS15195 PF00440 Bacterial regulatory proteins, tetR family NA29_RS15200 PF01220 Dehydroquinase class II NA29_RS15205 PF00083 Sugar (and other) transporter NA29_RS15205 PF07690 Major Facilitator Superfamily NA29_RS15230 PF00672 HAMP domain NA29_RS15230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS15230 PF02203 Tar ligand binding domain homologue NA29_RS15235 PF00701 Dihydrodipicolinate synthetase family NA29_RS15245 PF06490 Flagellar regulatory protein FleQ NA29_RS15245 PF02954 Bacterial regulatory protein, Fis family NA29_RS15245 PF00158 Sigma-54 interaction domain NA29_RS15250 PF00158 Sigma-54 interaction domain NA29_RS15250 PF00072 Response regulator receiver domain NA29_RS15250 PF02954 Bacterial regulatory protein, Fis family NA29_RS15260 PF13091 PLD-like domain NA29_RS15260 PF13396 Phospholipase_D-nuclease N-terminal NA29_RS15270 PF01425 Amidase NA29_RS15280 PF03707 Bacterial signalling protein N terminal repeat NA29_RS15280 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS15280 PF00563 EAL domain NA29_RS15305 PF00593 TonB dependent receptor NA29_RS15305 PF07715 TonB-dependent Receptor Plug Domain NA29_RS15315 PF08281 Sigma-70, region 4 NA29_RS15315 PF04542 Sigma-70 region 2 NA29_RS15320 PF01202 Shikimate kinase NA29_RS15325 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS15330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NA29_RS15330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NA29_RS15335 PF05853 beta-keto acid cleavage enzyme NA29_RS15345 PF00501 AMP-binding enzyme NA29_RS15350 PF07690 Major Facilitator Superfamily NA29_RS15375 PF03466 LysR substrate binding domain NA29_RS15375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15395 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NA29_RS15400 PF01177 Asp/Glu/Hydantoin racemase NA29_RS15405 PF17200 Single Cache domain 2 NA29_RS15405 PF07730 Histidine kinase NA29_RS15410 PF00196 Bacterial regulatory proteins, luxR family NA29_RS15410 PF00072 Response regulator receiver domain NA29_RS15415 PF07969 Amidohydrolase family NA29_RS15430 PF03466 LysR substrate binding domain NA29_RS15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15435 PF05899 Protein of unknown function (DUF861) NA29_RS15435 PF07883 Cupin domain NA29_RS15440 PF01979 Amidohydrolase family NA29_RS15470 PF00267 Gram-negative porin NA29_RS15480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NA29_RS15480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS15485 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS15490 PF09084 NMT1/THI5 like NA29_RS15495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NA29_RS15500 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS15505 PF00005 ABC transporter NA29_RS15510 PF07859 alpha/beta hydrolase fold NA29_RS15515 PF00701 Dihydrodipicolinate synthetase family NA29_RS15525 PF00324 Amino acid permease NA29_RS15545 PF17991 Thioredoxin like C-terminal domain NA29_RS15545 PF02683 Cytochrome C biogenesis protein transmembrane region NA29_RS15545 PF00578 AhpC/TSA family NA29_RS15550 PF04828 Glutathione-dependent formaldehyde-activating enzyme NA29_RS15560 PF00072 Response regulator receiver domain NA29_RS15560 PF00486 Transcriptional regulatory protein, C terminal NA29_RS15565 PF00672 HAMP domain NA29_RS15565 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS15565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS15575 PF12833 Helix-turn-helix domain NA29_RS15575 PF06719 AraC-type transcriptional regulator N-terminus NA29_RS15580 PF00106 short chain dehydrogenase NA29_RS15600 PF00005 ABC transporter NA29_RS15605 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS15615 PF03466 LysR substrate binding domain NA29_RS15615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15620 PF00491 Arginase family NA29_RS15625 PF01979 Amidohydrolase family NA29_RS15630 PF00324 Amino acid permease NA29_RS15635 PF00221 Aromatic amino acid lyase NA29_RS15640 PF17391 Urocanase N-terminal domain NA29_RS15640 PF17392 Urocanase C-terminal domain NA29_RS15640 PF01175 Urocanase Rossmann-like domain NA29_RS15645 PF07702 UTRA domain NA29_RS15645 PF00392 Bacterial regulatory proteins, gntR family NA29_RS15650 PF13609 Gram-negative porin NA29_RS15655 PF03641 Possible lysine decarboxylase NA29_RS15660 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS15665 PF13416 Bacterial extracellular solute-binding protein NA29_RS15670 PF08402 TOBE domain NA29_RS15670 PF00005 ABC transporter NA29_RS15675 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15680 PF03466 LysR substrate binding domain NA29_RS15685 PF05426 Alginate lyase NA29_RS15690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15690 PF03466 LysR substrate binding domain NA29_RS15695 PF00330 Aconitase family (aconitate hydratase) NA29_RS15700 PF09084 NMT1/THI5 like NA29_RS15705 PF00296 Luciferase-like monooxygenase NA29_RS15710 PF14031 Putative serine dehydratase domain NA29_RS15710 PF01168 Alanine racemase, N-terminal domain NA29_RS15715 PF13419 Haloacid dehalogenase-like hydrolase NA29_RS15720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15720 PF03466 LysR substrate binding domain NA29_RS15725 PF07690 Major Facilitator Superfamily NA29_RS15730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15730 PF03466 LysR substrate binding domain NA29_RS15740 PF01361 Tautomerase enzyme NA29_RS15755 PF09084 NMT1/THI5 like NA29_RS15770 PF00756 Putative esterase NA29_RS15775 PF00202 Aminotransferase class-III NA29_RS15780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15780 PF03466 LysR substrate binding domain NA29_RS15785 PF02203 Tar ligand binding domain homologue NA29_RS15785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS15785 PF00672 HAMP domain NA29_RS15790 PF00881 Nitroreductase family NA29_RS15800 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS15800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NA29_RS15810 PF03328 HpcH/HpaI aldolase/citrate lyase family NA29_RS15815 PF02515 CoA-transferase family III NA29_RS15820 PF03390 2-hydroxycarboxylate transporter family NA29_RS15825 PF03466 LysR substrate binding domain NA29_RS15825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15830 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS15840 PF01820 D-ala D-ala ligase N-terminus NA29_RS15840 PF07478 D-ala D-ala ligase C-terminus NA29_RS15845 PF02627 Carboxymuconolactone decarboxylase family NA29_RS15850 PF00155 Aminotransferase class I and II NA29_RS15850 PF00392 Bacterial regulatory proteins, gntR family NA29_RS15855 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS15860 PF13411 MerR HTH family regulatory protein NA29_RS15865 PF01804 Penicillin amidase NA29_RS15880 PF00664 ABC transporter transmembrane region NA29_RS15880 PF00005 ABC transporter NA29_RS15960 PF17862 AAA+ lid domain NA29_RS15960 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS15960 PF01434 Peptidase family M41 NA29_RS15970 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS15970 PF17151 Periplasmic sensor domain NA29_RS15975 PF00857 Isochorismatase family NA29_RS15980 PF00083 Sugar (and other) transporter NA29_RS15990 PF00465 Iron-containing alcohol dehydrogenase NA29_RS15995 PF00171 Aldehyde dehydrogenase family NA29_RS16000 PF07702 UTRA domain NA29_RS16000 PF00392 Bacterial regulatory proteins, gntR family NA29_RS16010 PF00005 ABC transporter NA29_RS16015 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS16020 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS16030 PF03466 LysR substrate binding domain NA29_RS16035 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS16050 PF00171 Aldehyde dehydrogenase family NA29_RS16055 PF00106 short chain dehydrogenase NA29_RS16070 PF03466 LysR substrate binding domain NA29_RS16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS16085 PF17763 Glutaminase/Asparaginase C-terminal domain NA29_RS16085 PF00710 Asparaginase, N-terminal NA29_RS16095 PF00459 Inositol monophosphatase family NA29_RS16105 PF06039 Malate:quinone oxidoreductase (Mqo) NA29_RS16110 PF00107 Zinc-binding dehydrogenase NA29_RS16110 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS16125 PF14698 Argininosuccinate lyase C-terminal NA29_RS16125 PF00206 Lyase NA29_RS16130 PF00106 short chain dehydrogenase NA29_RS16135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS16135 PF03466 LysR substrate binding domain NA29_RS16155 PF10996 Beta-Casp domain NA29_RS16155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NA29_RS16155 PF00753 Metallo-beta-lactamase superfamily NA29_RS16165 PF00582 Universal stress protein family NA29_RS16170 PF00196 Bacterial regulatory proteins, luxR family NA29_RS16170 PF00072 Response regulator receiver domain NA29_RS16175 PF00027 Cyclic nucleotide-binding domain NA29_RS16175 PF13545 Crp-like helix-turn-helix domain NA29_RS16180 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS16185 PF05231 MASE1 NA29_RS16185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS16185 PF07730 Histidine kinase NA29_RS16195 PF00107 Zinc-binding dehydrogenase NA29_RS16195 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS16195 PF13823 Alcohol dehydrogenase GroES-associated NA29_RS16200 PF14572 Phosphoribosyl synthetase-associated domain NA29_RS16200 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NA29_RS16205 PF02885 Glycosyl transferase family, helical bundle domain NA29_RS16205 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NA29_RS16205 PF00591 Glycosyl transferase family, a/b domain NA29_RS16265 PF00440 Bacterial regulatory proteins, tetR family NA29_RS16270 PF00011 Hsp20/alpha crystallin family NA29_RS16305 PF00156 Phosphoribosyl transferase domain NA29_RS16305 PF01738 Dienelactone hydrolase family NA29_RS16310 PF03477 ATP cone domain NA29_RS16310 PF02867 Ribonucleotide reductase, barrel domain NA29_RS16310 PF00317 Ribonucleotide reductase, all-alpha domain NA29_RS16340 PF07859 alpha/beta hydrolase fold NA29_RS16355 PF01546 Peptidase family M20/M25/M40 NA29_RS16355 PF07687 Peptidase dimerisation domain NA29_RS16360 PF07690 Major Facilitator Superfamily NA29_RS16365 PF00795 Carbon-nitrogen hydrolase NA29_RS16370 PF01546 Peptidase family M20/M25/M40 NA29_RS16370 PF07687 Peptidase dimerisation domain NA29_RS16375 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS16385 PF00484 Carbonic anhydrase NA29_RS16395 PF08212 Lipocalin-like domain NA29_RS16415 PF01593 Flavin containing amine oxidoreductase NA29_RS16415 PF02027 RolB/RolC glucosidase family NA29_RS16435 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS16435 PF14497 Glutathione S-transferase, C-terminal domain NA29_RS16440 PF03358 NADPH-dependent FMN reductase NA29_RS16445 PF01022 Bacterial regulatory protein, arsR family NA29_RS16455 PF01758 Sodium Bile acid symporter family NA29_RS16475 PF12697 Alpha/beta hydrolase family NA29_RS16495 PF00285 Citrate synthase, C-terminal domain NA29_RS16500 PF02515 CoA-transferase family III NA29_RS16510 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS16510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NA29_RS16550 PF00884 Sulfatase NA29_RS16550 PF16347 Domain of unknown function (DUF4976) NA29_RS16555 PF03466 LysR substrate binding domain NA29_RS16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS16560 PF01717 Cobalamin-independent synthase, Catalytic domain NA29_RS16560 PF08267 Cobalamin-independent synthase, N-terminal domain NA29_RS16565 PF00486 Transcriptional regulatory protein, C terminal NA29_RS16565 PF00072 Response regulator receiver domain NA29_RS16570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS16570 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS16575 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NA29_RS16580 PF04454 Encapsulating protein for peroxidase NA29_RS16585 PF04261 Dyp-type peroxidase family NA29_RS16590 PF00873 AcrB/AcrD/AcrF family NA29_RS16600 PF02321 Outer membrane efflux protein NA29_RS16605 PF00072 Response regulator receiver domain NA29_RS16605 PF00486 Transcriptional regulatory protein, C terminal NA29_RS16610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS16610 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS16610 PF00672 HAMP domain NA29_RS16635 PF00472 RF-1 domain NA29_RS16640 PF01381 Helix-turn-helix NA29_RS16645 PF07804 HipA-like C-terminal domain NA29_RS16645 PF13657 HipA N-terminal domain NA29_RS16655 PF01554 MatE NA29_RS16660 PF07690 Major Facilitator Superfamily NA29_RS16665 PF06150 ChaB NA29_RS16675 PF04972 BON domain NA29_RS16685 PF01590 GAF domain NA29_RS16685 PF00360 Phytochrome region NA29_RS16685 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS16685 PF00563 EAL domain NA29_RS16695 PF12794 Mechanosensitive ion channel inner membrane domain 1 NA29_RS16695 PF00924 Mechanosensitive ion channel NA29_RS16695 PF12795 Mechanosensitive ion channel porin domain NA29_RS16700 PF00563 EAL domain NA29_RS16700 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS16700 PF03707 Bacterial signalling protein N terminal repeat NA29_RS16710 PF07690 Major Facilitator Superfamily NA29_RS16715 PF13533 Biotin-lipoyl like NA29_RS16720 PF02321 Outer membrane efflux protein NA29_RS16735 PF03060 Nitronate monooxygenase NA29_RS16740 PF03060 Nitronate monooxygenase NA29_RS16745 PF00107 Zinc-binding dehydrogenase NA29_RS16745 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS16750 PF06441 Epoxide hydrolase N terminus NA29_RS16755 PF01638 HxlR-like helix-turn-helix NA29_RS16760 PF00005 ABC transporter NA29_RS16765 PF00005 ABC transporter NA29_RS16765 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS16770 PF02653 Branched-chain amino acid transport system / permease component NA29_RS16780 PF01580 FtsK/SpoIIIE family NA29_RS16780 PF17854 FtsK alpha domain NA29_RS16780 PF09397 Ftsk gamma domain NA29_RS16780 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NA29_RS16790 PF00563 EAL domain NA29_RS16790 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS16790 PF08448 PAS fold NA29_RS16800 PF01047 MarR family NA29_RS16805 PF07690 Major Facilitator Superfamily NA29_RS16810 PF12951 Passenger-associated-transport-repeat NA29_RS16810 PF03797 Autotransporter beta-domain NA29_RS16810 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat NA29_RS16815 PF17158 Membrane-associated sensor, integral membrane domain NA29_RS16815 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS16820 PF01614 Bacterial transcriptional regulator NA29_RS16820 PF09339 IclR helix-turn-helix domain NA29_RS16825 PF13193 AMP-binding enzyme C-terminal domain NA29_RS16825 PF00501 AMP-binding enzyme NA29_RS16830 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS16835 PF08402 TOBE domain NA29_RS16835 PF00005 ABC transporter NA29_RS16845 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS16850 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NA29_RS16850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NA29_RS16855 PF02615 Malate/L-lactate dehydrogenase NA29_RS16860 PF00939 Sodium:sulfate symporter transmembrane region NA29_RS16870 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS16870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NA29_RS16875 PF00209 Sodium:neurotransmitter symporter family NA29_RS16900 PF02634 FdhD/NarQ family NA29_RS16905 PF12838 4Fe-4S dicluster domain NA29_RS16905 PF00384 Molybdopterin oxidoreductase NA29_RS16905 PF01568 Molydopterin dinucleotide binding domain NA29_RS16905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS16905 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NA29_RS16910 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NA29_RS16910 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NA29_RS16910 PF10531 SLBB domain NA29_RS16925 PF00384 Molybdopterin oxidoreductase NA29_RS16955 PF00593 TonB dependent receptor NA29_RS16955 PF07715 TonB-dependent Receptor Plug Domain NA29_RS16960 PF00175 Oxidoreductase NAD-binding domain NA29_RS16960 PF00970 Oxidoreductase FAD-binding domain NA29_RS16965 PF16363 GDP-mannose 4,6 dehydratase NA29_RS16990 PF00149 Calcineurin-like phosphoesterase NA29_RS16995 PF00216 Bacterial DNA-binding protein NA29_RS17005 PF00403 Heavy-metal-associated domain NA29_RS17010 PF13411 MerR HTH family regulatory protein NA29_RS17015 PF10518 TAT (twin-arginine translocation) pathway signal sequence NA29_RS17015 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS17015 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding NA29_RS17025 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS17035 PF00892 EamA-like transporter family NA29_RS17045 PF00171 Aldehyde dehydrogenase family NA29_RS17050 PF12848 ABC transporter NA29_RS17050 PF00005 ABC transporter NA29_RS17055 PF02608 ABC transporter substrate-binding protein PnrA-like NA29_RS17060 PF02653 Branched-chain amino acid transport system / permease component NA29_RS17065 PF02653 Branched-chain amino acid transport system / permease component NA29_RS17070 PF00005 ABC transporter NA29_RS17075 PF03466 LysR substrate binding domain NA29_RS17075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17080 PF01979 Amidohydrolase family NA29_RS17085 PF00860 Permease family NA29_RS17090 PF00576 HIUase/Transthyretin family NA29_RS17100 PF01554 MatE NA29_RS17120 PF14403 Circularly permuted ATP-grasp type 2 NA29_RS17125 PF04115 Ureidoglycolate lyase NA29_RS17130 PF03561 Allantoicase repeat NA29_RS17135 PF01014 Uricase NA29_RS17135 PF09349 OHCU decarboxylase NA29_RS17145 PF17676 LD-carboxypeptidase C-terminal domain NA29_RS17145 PF02016 LD-carboxypeptidase N-terminal domain NA29_RS17150 PF14437 MafB19-like deaminase NA29_RS17155 PF00392 Bacterial regulatory proteins, gntR family NA29_RS17160 PF13458 Periplasmic binding protein NA29_RS17165 PF02653 Branched-chain amino acid transport system / permease component NA29_RS17175 PF00005 ABC transporter NA29_RS17180 PF00005 ABC transporter NA29_RS17195 PF03466 LysR substrate binding domain NA29_RS17195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17210 PF02321 Outer membrane efflux protein NA29_RS17215 PF13533 Biotin-lipoyl like NA29_RS17225 PF04632 Fusaric acid resistance protein family NA29_RS17230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17230 PF03466 LysR substrate binding domain NA29_RS17235 PF03466 LysR substrate binding domain NA29_RS17235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17245 PF00561 alpha/beta hydrolase fold NA29_RS17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17250 PF03466 LysR substrate binding domain NA29_RS17265 PF00072 Response regulator receiver domain NA29_RS17265 PF00196 Bacterial regulatory proteins, luxR family NA29_RS17270 PF07730 Histidine kinase NA29_RS17275 PF02540 NAD synthase NA29_RS17275 PF00117 Glutamine amidotransferase class-I NA29_RS17275 PF00958 GMP synthase C terminal domain NA29_RS17285 PF00571 CBS domain NA29_RS17285 PF00478 IMP dehydrogenase / GMP reductase domain NA29_RS17295 PF03658 RnfH family Ubiquitin NA29_RS17300 PF03364 Polyketide cyclase / dehydrase and lipid transport NA29_RS17305 PF01668 SmpB protein NA29_RS17310 PF01145 SPFH domain / Band 7 family NA29_RS17310 PF16200 C-terminal region of band_7 NA29_RS17320 PF02896 PEP-utilising enzyme, TIM barrel domain NA29_RS17320 PF00391 PEP-utilising enzyme, mobile domain NA29_RS17320 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NA29_RS17325 PF03618 Kinase/pyrophosphorylase NA29_RS17330 PF08032 RNA 2'-O ribose methyltransferase substrate binding NA29_RS17330 PF00588 SpoU rRNA Methylase family NA29_RS17335 PF01351 Ribonuclease HII NA29_RS17340 PF02684 Lipid-A-disaccharide synthetase NA29_RS17345 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS17345 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NA29_RS17350 PF07977 FabA-like domain NA29_RS17355 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NA29_RS17355 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS17365 PF07244 Surface antigen variable number repeat NA29_RS17365 PF01103 Surface antigen NA29_RS17370 PF17820 PDZ domain NA29_RS17370 PF02163 Peptidase family M50 NA29_RS17375 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NA29_RS17375 PF13288 DXP reductoisomerase C-terminal domain NA29_RS17375 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NA29_RS17385 PF01255 Putative undecaprenyl diphosphate synthase NA29_RS17390 PF01765 Ribosome recycling factor NA29_RS17395 PF00696 Amino acid kinase family NA29_RS17400 PF00889 Elongation factor TS NA29_RS17405 PF00318 Ribosomal protein S2 NA29_RS17415 PF00557 Metallopeptidase family M24 NA29_RS17420 PF01909 Nucleotidyltransferase domain NA29_RS17420 PF01966 HD domain NA29_RS17420 PF08335 GlnD PII-uridylyltransferase NA29_RS17425 PF01479 S4 domain NA29_RS17425 PF00849 RNA pseudouridylate synthase NA29_RS17430 PF01327 Polypeptide deformylase NA29_RS17435 PF00533 BRCA1 C Terminus (BRCT) domain NA29_RS17435 PF03120 NAD-dependent DNA ligase OB-fold domain NA29_RS17435 PF01653 NAD-dependent DNA ligase adenylation domain NA29_RS17435 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NA29_RS17435 PF12826 Helix-hairpin-helix motif NA29_RS17445 PF06470 SMC proteins Flexible Hinge Domain NA29_RS17445 PF02463 RecF/RecN/SMC N terminal domain NA29_RS17455 PF00155 Aminotransferase class I and II NA29_RS17460 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS17460 PF14602 Hexapeptide repeat of succinyl-transferase NA29_RS17460 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NA29_RS17465 PF03960 ArsC family NA29_RS17470 PF07687 Peptidase dimerisation domain NA29_RS17470 PF01546 Peptidase family M20/M25/M40 NA29_RS17475 PF05175 Methyltransferase small domain NA29_RS17480 PF13396 Phospholipase_D-nuclease N-terminal NA29_RS17480 PF13091 PLD-like domain NA29_RS17485 PF12848 ABC transporter NA29_RS17485 PF00005 ABC transporter NA29_RS17495 PF18073 Rubredoxin metal binding domain NA29_RS17500 PF01168 Alanine racemase, N-terminal domain NA29_RS17500 PF00842 Alanine racemase, C-terminal domain NA29_RS17505 PF07690 Major Facilitator Superfamily NA29_RS17510 PF08543 Phosphomethylpyrimidine kinase NA29_RS17520 PF03167 Uracil DNA glycosylase superfamily NA29_RS17530 PF00814 Glycoprotease family NA29_RS17535 PF00270 DEAD/DEAH box helicase NA29_RS17535 PF00271 Helicase conserved C-terminal domain NA29_RS17540 PF00561 alpha/beta hydrolase fold NA29_RS17545 PF01274 Malate synthase NA29_RS17550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17550 PF03466 LysR substrate binding domain NA29_RS17555 PF00582 Universal stress protein family NA29_RS17560 PF00463 Isocitrate lyase family NA29_RS17585 PF02311 AraC-like ligand binding domain NA29_RS17585 PF12833 Helix-turn-helix domain NA29_RS17590 PF00072 Response regulator receiver domain NA29_RS17590 PF04397 LytTr DNA-binding domain NA29_RS17595 PF06580 Histidine kinase NA29_RS17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS17595 PF07694 5TMR of 5TMR-LYT NA29_RS17605 PF02861 Clp amino terminal domain, pathogenicity island component NA29_RS17605 PF10431 C-terminal, D2-small domain, of ClpB protein NA29_RS17605 PF17871 AAA lid domain NA29_RS17605 PF07724 AAA domain (Cdc48 subfamily) NA29_RS17605 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS17615 PF02391 MoaE protein NA29_RS17620 PF02597 ThiS family NA29_RS17625 PF03453 MoeA N-terminal region (domain I and II) NA29_RS17625 PF00994 Probable molybdopterin binding domain NA29_RS17625 PF03454 MoeA C-terminal region (domain IV) NA29_RS17630 PF14821 Threonine synthase N terminus NA29_RS17630 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS17635 PF01842 ACT domain NA29_RS17635 PF00742 Homoserine dehydrogenase NA29_RS17635 PF03447 Homoserine dehydrogenase, NAD binding domain NA29_RS17640 PF00155 Aminotransferase class I and II NA29_RS17650 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NA29_RS17660 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NA29_RS17665 PF00535 Glycosyl transferase family 2 NA29_RS17675 PF01522 Polysaccharide deacetylase NA29_RS17680 PF00578 AhpC/TSA family NA29_RS17685 PF02562 PhoH-like protein NA29_RS17685 PF13638 PIN domain NA29_RS17690 PF00877 NlpC/P60 family NA29_RS17700 PF01384 Phosphate transporter family NA29_RS17710 PF00772 DnaB-like helicase N terminal domain NA29_RS17710 PF03796 DnaB-like helicase C terminal domain NA29_RS17715 PF01281 Ribosomal protein L9, N-terminal domain NA29_RS17715 PF03948 Ribosomal protein L9, C-terminal domain NA29_RS17720 PF01084 Ribosomal protein S18 NA29_RS17730 PF01250 Ribosomal protein S6 NA29_RS17735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17735 PF03466 LysR substrate binding domain NA29_RS17740 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS17740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS17740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS17745 PF01261 Xylose isomerase-like TIM barrel NA29_RS17750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NA29_RS17750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NA29_RS17755 PF17763 Glutaminase/Asparaginase C-terminal domain NA29_RS17755 PF00710 Asparaginase, N-terminal NA29_RS17760 PF03466 LysR substrate binding domain NA29_RS17760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17765 PF12857 TOBE-like domain NA29_RS17765 PF00005 ABC transporter NA29_RS17770 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS17775 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS17790 PF01494 FAD binding domain NA29_RS17805 PF00529 HlyD membrane-fusion protein of T1SS NA29_RS17805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NA29_RS17810 PF00873 AcrB/AcrD/AcrF family NA29_RS17820 PF01726 LexA DNA binding domain NA29_RS17820 PF00717 Peptidase S24-like NA29_RS17835 PF00009 Elongation factor Tu GTP binding domain NA29_RS17835 PF03144 Elongation factor Tu domain 2 NA29_RS17835 PF00679 Elongation factor G C-terminus NA29_RS17845 PF02321 Outer membrane efflux protein NA29_RS17850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NA29_RS17850 PF00529 HlyD membrane-fusion protein of T1SS NA29_RS17855 PF07690 Major Facilitator Superfamily NA29_RS17880 PF00313 'Cold-shock' DNA-binding domain NA29_RS17885 PF01509 TruB family pseudouridylate synthase (N terminal domain) NA29_RS17885 PF16198 tRNA pseudouridylate synthase B C-terminal domain NA29_RS17885 PF09157 Pseudouridine synthase II TruB, C-terminal NA29_RS17890 PF02033 Ribosome-binding factor A NA29_RS17895 PF11987 Translation-initiation factor 2 NA29_RS17895 PF08364 Bacterial translation initiation factor IF-2 associated region NA29_RS17895 PF00009 Elongation factor Tu GTP binding domain NA29_RS17895 PF04760 Translation initiation factor IF-2, N-terminal region NA29_RS17900 PF13184 NusA-like KH domain NA29_RS17900 PF08529 NusA N-terminal domain NA29_RS17905 PF17384 RimP C-terminal SH3 domain NA29_RS17905 PF02576 RimP N-terminal domain NA29_RS17910 PF00849 RNA pseudouridylate synthase NA29_RS17910 PF01479 S4 domain NA29_RS17915 PF04079 Segregation and condensation complex subunit ScpB NA29_RS17920 PF13545 Crp-like helix-turn-helix domain NA29_RS17920 PF00027 Cyclic nucleotide-binding domain NA29_RS17930 PF03466 LysR substrate binding domain NA29_RS17930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17935 PF00107 Zinc-binding dehydrogenase NA29_RS17935 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS17940 PF00994 Probable molybdopterin binding domain NA29_RS17940 PF02464 Competence-damaged protein NA29_RS17940 PF18146 Damage-inducible protein CinA KH domain NA29_RS17955 PF11898 Domain of unknown function (DUF3418) NA29_RS17955 PF00270 DEAD/DEAH box helicase NA29_RS17955 PF00271 Helicase conserved C-terminal domain NA29_RS17955 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NA29_RS17955 PF04408 Helicase associated domain (HA2) NA29_RS17960 PF00583 Acetyltransferase (GNAT) family NA29_RS17960 PF00696 Amino acid kinase family NA29_RS17965 PF04362 Bacterial Fe(2+) trafficking NA29_RS17975 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NA29_RS17980 PF00923 Transaldolase/Fructose-6-phosphate aldolase NA29_RS17995 PF00588 SpoU rRNA Methylase family NA29_RS17995 PF08032 RNA 2'-O ribose methyltransferase substrate binding NA29_RS18000 PF17876 Cold shock domain NA29_RS18000 PF08461 Ribonuclease R winged-helix domain NA29_RS18000 PF08206 Ribonuclease B OB domain NA29_RS18000 PF00773 RNB domain NA29_RS18000 PF00575 S1 RNA binding domain NA29_RS18020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS18020 PF03466 LysR substrate binding domain NA29_RS18035 PF12852 Cupin NA29_RS18035 PF12833 Helix-turn-helix domain NA29_RS18050 PF00005 ABC transporter NA29_RS18060 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS18065 PF00849 RNA pseudouridylate synthase NA29_RS18065 PF01479 S4 domain NA29_RS18070 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NA29_RS18075 PF03352 Methyladenine glycosylase NA29_RS18085 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS18095 PF00392 Bacterial regulatory proteins, gntR family NA29_RS18095 PF07729 FCD domain NA29_RS18100 PF01699 Sodium/calcium exchanger protein NA29_RS18115 PF00677 Lumazine binding domain NA29_RS18135 PF04321 RmlD substrate binding domain NA29_RS18140 PF00158 Sigma-54 interaction domain NA29_RS18140 PF00072 Response regulator receiver domain NA29_RS18140 PF02954 Bacterial regulatory protein, Fis family NA29_RS18145 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS18145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS18145 PF00989 PAS fold NA29_RS18150 PF03951 Glutamine synthetase, beta-Grasp domain NA29_RS18150 PF00120 Glutamine synthetase, catalytic domain NA29_RS18160 PF01810 LysE type translocator NA29_RS18215 PF02203 Tar ligand binding domain homologue NA29_RS18215 PF00672 HAMP domain NA29_RS18215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS18220 PF00679 Elongation factor G C-terminus NA29_RS18220 PF14492 Elongation Factor G, domain II NA29_RS18220 PF03764 Elongation factor G, domain IV NA29_RS18220 PF00009 Elongation factor Tu GTP binding domain NA29_RS18220 PF03144 Elongation factor Tu domain 2 NA29_RS18225 PF08543 Phosphomethylpyrimidine kinase NA29_RS18230 PF00756 Putative esterase NA29_RS18240 PF00704 Glycosyl hydrolases family 18 NA29_RS18270 PF03547 Membrane transport protein NA29_RS18275 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS18280 PF00313 'Cold-shock' DNA-binding domain NA29_RS18285 PF02222 ATP-grasp domain NA29_RS18295 PF00106 short chain dehydrogenase NA29_RS18300 PF00743 Flavin-binding monooxygenase-like NA29_RS18305 PF00561 alpha/beta hydrolase fold NA29_RS18350 PF00313 'Cold-shock' DNA-binding domain NA29_RS18365 PF01207 Dihydrouridine synthase (Dus) NA29_RS18370 PF00892 EamA-like transporter family NA29_RS18375 PF13673 Acetyltransferase (GNAT) domain NA29_RS18385 PF00293 NUDIX domain NA29_RS18385 PF09297 NADH pyrophosphatase zinc ribbon domain NA29_RS18390 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NA29_RS18395 PF04377 Arginine-tRNA-protein transferase, C terminus NA29_RS18395 PF04376 Arginine-tRNA-protein transferase, N terminus NA29_RS18400 PF01180 Dihydroorotate dehydrogenase NA29_RS18405 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS18410 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS18415 PF11870 Domain of unknown function (DUF3390) NA29_RS18415 PF13183 4Fe-4S dicluster domain NA29_RS18415 PF02589 LUD domain NA29_RS18420 PF02754 Cysteine-rich domain NA29_RS18430 PF09339 IclR helix-turn-helix domain NA29_RS18430 PF01614 Bacterial transcriptional regulator NA29_RS18435 PF00768 D-alanyl-D-alanine carboxypeptidase NA29_RS18440 PF00881 Nitroreductase family NA29_RS18445 PF00892 EamA-like transporter family NA29_RS18450 PF00850 Histone deacetylase domain NA29_RS18455 PF09361 Phasin protein NA29_RS18460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NA29_RS18460 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS18465 PF00227 Proteasome subunit NA29_RS18470 PF00364 Biotin-requiring enzyme NA29_RS18470 PF02817 e3 binding domain NA29_RS18470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NA29_RS18475 PF17831 Pyruvate dehydrogenase E1 component middle domain NA29_RS18475 PF00456 Transketolase, thiamine diphosphate binding domain NA29_RS18480 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS18480 PF00989 PAS fold NA29_RS18480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS18485 PF00196 Bacterial regulatory proteins, luxR family NA29_RS18485 PF00072 Response regulator receiver domain NA29_RS18490 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NA29_RS18490 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NA29_RS18495 PF01432 Peptidase family M3 NA29_RS18505 PF00156 Phosphoribosyl transferase domain NA29_RS18510 PF00709 Adenylosuccinate synthetase NA29_RS18515 PF13393 Histidyl-tRNA synthetase NA29_RS18520 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NA29_RS18525 PF01145 SPFH domain / Band 7 family NA29_RS18530 PF01145 SPFH domain / Band 7 family NA29_RS18530 PF12221 Bacterial membrane protein N terminal NA29_RS18535 PF16360 GTP-binding GTPase Middle Region NA29_RS18535 PF13167 GTP-binding GTPase N-terminal NA29_RS18535 PF01926 50S ribosome-binding GTPase NA29_RS18540 PF17209 Hfq protein NA29_RS18545 PF01926 50S ribosome-binding GTPase NA29_RS18545 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NA29_RS18550 PF13360 PQQ-like domain NA29_RS18555 PF09976 Tetratricopeptide repeat-like domain NA29_RS18560 PF03129 Anticodon binding domain NA29_RS18560 PF13393 Histidyl-tRNA synthetase NA29_RS18565 PF04551 GcpE protein NA29_RS18575 PF04055 Radical SAM superfamily NA29_RS18580 PF00334 Nucleoside diphosphate kinase NA29_RS18585 PF01027 Inhibitor of apoptosis-promoting Bax1 NA29_RS18590 PF05958 tRNA (Uracil-5-)-methyltransferase NA29_RS18600 PF00140 Sigma-70 factor, region 1.2 NA29_RS18600 PF04542 Sigma-70 region 2 NA29_RS18600 PF04539 Sigma-70 region 3 NA29_RS18600 PF04545 Sigma-70, region 4 NA29_RS18605 PF01551 Peptidase family M23 NA29_RS18605 PF01476 LysM domain NA29_RS18615 PF01975 Survival protein SurE NA29_RS18620 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS18625 PF00005 ABC transporter NA29_RS18630 PF09084 NMT1/THI5 like NA29_RS18635 PF02515 CoA-transferase family III NA29_RS18640 PF00196 Bacterial regulatory proteins, luxR family NA29_RS18685 PF00158 Sigma-54 interaction domain NA29_RS18685 PF00072 Response regulator receiver domain NA29_RS18685 PF02954 Bacterial regulatory protein, Fis family NA29_RS18690 PF13662 Toprim domain NA29_RS18690 PF02132 RecR protein NA29_RS18695 PF02575 YbaB/EbfC DNA-binding family NA29_RS18700 PF12170 DNA polymerase III tau subunit V interacting with alpha NA29_RS18700 PF12169 DNA polymerase III subunits gamma and tau domain III NA29_RS18700 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NA29_RS18705 PF00085 Thioredoxin NA29_RS18710 PF07497 Rho termination factor, RNA-binding domain NA29_RS18710 PF07498 Rho termination factor, N-terminal domain NA29_RS18710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NA29_RS18720 PF13416 Bacterial extracellular solute-binding protein NA29_RS18725 PF01734 Patatin-like phospholipase NA29_RS18730 PF00877 NlpC/P60 family NA29_RS18735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS18735 PF00005 ABC transporter NA29_RS18740 PF12911 N-terminal TM domain of oligopeptide transport permease C NA29_RS18740 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS18745 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS18750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NA29_RS18760 PF07690 Major Facilitator Superfamily NA29_RS18765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NA29_RS18775 PF01842 ACT domain NA29_RS18775 PF13840 ACT domain NA29_RS18775 PF00696 Amino acid kinase family NA29_RS18780 PF01171 PP-loop family NA29_RS18780 PF11734 TilS substrate C-terminal domain NA29_RS18780 PF09179 TilS substrate binding domain NA29_RS18785 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NA29_RS18790 PF00730 HhH-GPD superfamily base excision DNA repair protein NA29_RS18795 PF01406 tRNA synthetases class I (C) catalytic domain NA29_RS18795 PF09190 DALR domain NA29_RS18805 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NA29_RS18810 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NA29_RS18815 PF00149 Calcineurin-like phosphoesterase NA29_RS18820 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS18825 PF00588 SpoU rRNA Methylase family NA29_RS18830 PF00459 Inositol monophosphatase family NA29_RS18835 PF00749 tRNA synthetases class I (E and Q), catalytic domain NA29_RS18845 PF00005 ABC transporter NA29_RS18850 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS18855 PF00296 Luciferase-like monooxygenase NA29_RS18860 PF03358 NADPH-dependent FMN reductase NA29_RS18865 PF12833 Helix-turn-helix domain NA29_RS18865 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NA29_RS18870 PF01588 Putative tRNA binding domain NA29_RS18870 PF09334 tRNA synthetases class I (M) NA29_RS18875 PF00884 Sulfatase NA29_RS18885 PF00155 Aminotransferase class I and II NA29_RS18890 PF01053 Cys/Met metabolism PLP-dependent enzyme NA29_RS18895 PF00156 Phosphoribosyl transferase domain NA29_RS18910 PF02875 Mur ligase family, glutamate ligase domain NA29_RS18910 PF08245 Mur ligase middle domain NA29_RS18915 PF01039 Carboxyl transferase domain NA29_RS18915 PF17848 Acetyl-coA carboxylase zinc finger domain NA29_RS18920 PF00290 Tryptophan synthase alpha chain NA29_RS18925 PF01555 DNA methylase NA29_RS18930 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS18935 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NA29_RS18940 PF01416 tRNA pseudouridine synthase NA29_RS18950 PF02774 Semialdehyde dehydrogenase, dimerisation domain NA29_RS18950 PF01118 Semialdehyde dehydrogenase, NAD binding domain NA29_RS18955 PF00180 Isocitrate/isopropylmalate dehydrogenase NA29_RS18960 PF00694 Aconitase C-terminal domain NA29_RS18970 PF00330 Aconitase family (aconitate hydratase) NA29_RS18975 PF00285 Citrate synthase, C-terminal domain NA29_RS18980 PF03937 Flavinator of succinate dehydrogenase NA29_RS18985 PF13085 2Fe-2S iron-sulfur cluster binding domain NA29_RS18990 PF02910 Fumarate reductase flavoprotein C-term NA29_RS18990 PF00890 FAD binding domain NA29_RS19005 PF00392 Bacterial regulatory proteins, gntR family NA29_RS19005 PF07702 UTRA domain NA29_RS19010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NA29_RS19010 PF00056 lactate/malate dehydrogenase, NAD binding domain NA29_RS19020 PF00694 Aconitase C-terminal domain NA29_RS19020 PF00330 Aconitase family (aconitate hydratase) NA29_RS19025 PF12833 Helix-turn-helix domain NA29_RS19025 PF06029 AlkA N-terminal domain NA29_RS19025 PF02805 Metal binding domain of Ada NA29_RS19025 PF00730 HhH-GPD superfamily base excision DNA repair protein NA29_RS19030 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NA29_RS19030 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NA29_RS19055 PF00246 Zinc carboxypeptidase NA29_RS19055 PF18027 Cytosolic carboxypeptidase N-terminal domain NA29_RS19060 PF03883 Peroxide stress protein YaaA NA29_RS19070 PF00155 Aminotransferase class I and II NA29_RS19075 PF14497 Glutathione S-transferase, C-terminal domain NA29_RS19075 PF13417 Glutathione S-transferase, N-terminal domain NA29_RS19080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NA29_RS19080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NA29_RS19080 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NA29_RS19085 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS19100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS19100 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS19100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS19105 PF00043 Glutathione S-transferase, C-terminal domain NA29_RS19105 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS19110 PF07411 Domain of unknown function (DUF1508) NA29_RS19135 PF01575 MaoC like domain NA29_RS19150 PF00293 NUDIX domain NA29_RS19160 PF00361 Proton-conducting membrane transporter NA29_RS19165 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NA29_RS19165 PF00361 Proton-conducting membrane transporter NA29_RS19170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NA29_RS19170 PF00361 Proton-conducting membrane transporter NA29_RS19175 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NA29_RS19180 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NA29_RS19185 PF12838 4Fe-4S dicluster domain NA29_RS19190 PF00146 NADH dehydrogenase NA29_RS19195 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal NA29_RS19195 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NA29_RS19195 PF00384 Molybdopterin oxidoreductase NA29_RS19200 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NA29_RS19200 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NA29_RS19200 PF10531 SLBB domain NA29_RS19210 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NA29_RS19215 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NA29_RS19220 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NA29_RS19225 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NA29_RS19235 PF03840 Preprotein translocase SecG subunit NA29_RS19240 PF00121 Triosephosphate isomerase NA29_RS19245 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS19245 PF00107 Zinc-binding dehydrogenase NA29_RS19255 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS19255 PF08447 PAS fold NA29_RS19255 PF05231 MASE1 NA29_RS19255 PF00563 EAL domain NA29_RS19255 PF08448 PAS fold NA29_RS19255 PF13426 PAS domain NA29_RS19265 PF01624 MutS domain I NA29_RS19265 PF05188 MutS domain II NA29_RS19265 PF05192 MutS domain III NA29_RS19265 PF00488 MutS domain V NA29_RS19265 PF05190 MutS family domain IV NA29_RS19275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NA29_RS19280 PF08007 Cupin superfamily protein NA29_RS19290 PF06804 NlpB/DapX lipoprotein NA29_RS19295 PF00701 Dihydrodipicolinate synthetase family NA29_RS19300 PF08241 Methyltransferase domain NA29_RS19305 PF00579 tRNA synthetases class I (W and Y) NA29_RS19310 PF02163 Peptidase family M50 NA29_RS19315 PF01300 Telomere recombination NA29_RS19320 PF02811 PHP domain NA29_RS19325 PF12697 Alpha/beta hydrolase family NA29_RS19330 PF04305 Protein of unknown function (DUF455) NA29_RS19335 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS19340 PF01430 Hsp33 protein NA29_RS19350 PF04977 Septum formation initiator NA29_RS19355 PF03952 Enolase, N-terminal domain NA29_RS19355 PF00113 Enolase, C-terminal TIM barrel domain NA29_RS19360 PF00793 DAHP synthetase I family NA29_RS19365 PF06418 CTP synthase N-terminus NA29_RS19365 PF00117 Glutamine amidotransferase class-I NA29_RS19370 PF08386 TAP-like protein NA29_RS19370 PF00561 alpha/beta hydrolase fold NA29_RS19375 PF00753 Metallo-beta-lactamase superfamily NA29_RS19375 PF03772 Competence protein NA29_RS19380 PF01026 TatD related DNase NA29_RS19385 PF00005 ABC transporter NA29_RS19390 PF02687 FtsX-like permease family NA29_RS19390 PF12704 MacB-like periplasmic core domain NA29_RS19400 PF02272 DHHA1 domain NA29_RS19400 PF01368 DHH family NA29_RS19400 PF17768 RecJ OB domain NA29_RS19410 PF00593 TonB dependent receptor NA29_RS19410 PF07715 TonB-dependent Receptor Plug Domain NA29_RS19420 PF03466 LysR substrate binding domain NA29_RS19420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19430 PF00472 RF-1 domain NA29_RS19430 PF03462 PCRF domain NA29_RS19435 PF03462 PCRF domain NA29_RS19435 PF00472 RF-1 domain NA29_RS19445 PF00152 tRNA synthetases class II (D, K and N) NA29_RS19445 PF01336 OB-fold nucleic acid binding domain NA29_RS19470 PF04384 Iron-sulphur cluster assembly NA29_RS19475 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS19480 PF00012 Hsp70 protein NA29_RS19485 PF07743 HSCB C-terminal oligomerisation domain NA29_RS19490 PF01521 Iron-sulphur cluster biosynthesis NA29_RS19495 PF01592 NifU-like N terminal domain NA29_RS19500 PF00266 Aminotransferase class-V NA29_RS19505 PF02082 Transcriptional regulator NA29_RS19515 PF01451 Low molecular weight phosphotyrosine protein phosphatase NA29_RS19520 PF12344 Ultra-violet resistance protein B NA29_RS19520 PF00271 Helicase conserved C-terminal domain NA29_RS19520 PF04851 Type III restriction enzyme, res subunit NA29_RS19520 PF02151 UvrB/uvrC motif NA29_RS19520 PF17757 UvrB interaction domain NA29_RS19525 PF00155 Aminotransferase class I and II NA29_RS19535 PF17938 Tetracyclin repressor-like, C-terminal domain NA29_RS19535 PF00440 Bacterial regulatory proteins, tetR family NA29_RS19540 PF04060 Putative Fe-S cluster NA29_RS19545 PF10576 Iron-sulfur binding domain of endonuclease III NA29_RS19545 PF00633 Helix-hairpin-helix motif NA29_RS19545 PF00730 HhH-GPD superfamily base excision DNA repair protein NA29_RS19550 PF00881 Nitroreductase family NA29_RS19555 PF00892 EamA-like transporter family NA29_RS19570 PF00034 Cytochrome c NA29_RS19575 PF01434 Peptidase family M41 NA29_RS19575 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS19575 PF17862 AAA+ lid domain NA29_RS19585 PF03594 Benzoate membrane transport protein NA29_RS19605 PF04345 Chorismate lyase NA29_RS19610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS19610 PF00183 Hsp90 protein NA29_RS19615 PF00155 Aminotransferase class I and II NA29_RS19615 PF00392 Bacterial regulatory proteins, gntR family NA29_RS19630 PF00892 EamA-like transporter family NA29_RS19635 PF00155 Aminotransferase class I and II NA29_RS19645 PF07690 Major Facilitator Superfamily NA29_RS19650 PF03466 LysR substrate binding domain NA29_RS19650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19660 PF00521 DNA gyrase/topoisomerase IV, subunit A NA29_RS19665 PF01464 Transglycosylase SLT domain NA29_RS19675 PF01751 Toprim domain NA29_RS19675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS19675 PF00204 DNA gyrase B NA29_RS19675 PF00986 DNA gyrase B subunit, carboxyl terminus NA29_RS19680 PF16326 ABC transporter C-terminal domain NA29_RS19680 PF00005 ABC transporter NA29_RS19680 PF12848 ABC transporter NA29_RS19685 PF13673 Acetyltransferase (GNAT) domain NA29_RS19705 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NA29_RS19705 PF00749 tRNA synthetases class I (E and Q), catalytic domain NA29_RS19715 PF03441 FAD binding domain of DNA photolyase NA29_RS19715 PF00875 DNA photolyase NA29_RS19725 PF02308 MgtC family NA29_RS19730 PF11799 impB/mucB/samB family C-terminal domain NA29_RS19730 PF00817 impB/mucB/samB family NA29_RS19740 PF02515 CoA-transferase family III NA29_RS19745 PF02515 CoA-transferase family III NA29_RS19750 PF00330 Aconitase family (aconitate hydratase) NA29_RS19755 PF09084 NMT1/THI5 like NA29_RS19760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19760 PF03466 LysR substrate binding domain NA29_RS19765 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS19770 PF08402 TOBE domain NA29_RS19770 PF00005 ABC transporter NA29_RS19775 PF00303 Thymidylate synthase NA29_RS19780 PF00186 Dihydrofolate reductase NA29_RS19785 PF00360 Phytochrome region NA29_RS19785 PF01590 GAF domain NA29_RS19785 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS19785 PF00563 EAL domain NA29_RS19790 PF00005 ABC transporter NA29_RS19795 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS19795 PF00005 ABC transporter NA29_RS19800 PF02653 Branched-chain amino acid transport system / permease component NA29_RS19800 PF11862 Domain of unknown function (DUF3382) NA29_RS19805 PF02653 Branched-chain amino acid transport system / permease component NA29_RS19810 PF13458 Periplasmic binding protein NA29_RS19815 PF01523 Putative modulator of DNA gyrase NA29_RS19820 PF04751 Protein of unknown function (DUF615) NA29_RS19825 PF00994 Probable molybdopterin binding domain NA29_RS19830 PF00929 Exonuclease NA29_RS19835 PF16491 CAAX prenyl protease N-terminal, five membrane helices NA29_RS19835 PF01435 Peptidase family M48 NA29_RS19840 PF03193 RsgA GTPase NA29_RS19845 PF03186 CobD/Cbib protein NA29_RS19845 PF17113 Regulatory signalling modulator protein AmpE NA29_RS19850 PF00293 NUDIX domain NA29_RS19855 PF01245 Ribosomal protein L19 NA29_RS19860 PF01746 tRNA (Guanine-1)-methyltransferase NA29_RS19865 PF01782 RimM N-terminal domain NA29_RS19865 PF05239 PRC-barrel domain NA29_RS19870 PF00886 Ribosomal protein S16 NA29_RS19875 PF07995 Glucose / Sorbosone dehydrogenase NA29_RS19895 PF04055 Radical SAM superfamily NA29_RS19900 PF01037 Lrp/AsnC ligand binding domain NA29_RS19905 PF01266 FAD dependent oxidoreductase NA29_RS19910 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NA29_RS19910 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NA29_RS19920 PF13419 Haloacid dehalogenase-like hydrolase NA29_RS19935 PF01810 LysE type translocator NA29_RS19940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19940 PF03466 LysR substrate binding domain NA29_RS19955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS19955 PF00034 Cytochrome c NA29_RS19960 PF05199 GMC oxidoreductase NA29_RS19960 PF00732 GMC oxidoreductase NA29_RS19965 PF13618 Gluconate 2-dehydrogenase subunit 3 NA29_RS19990 PF07690 Major Facilitator Superfamily NA29_RS19995 PF00175 Oxidoreductase NAD-binding domain NA29_RS19995 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NA29_RS20000 PF01180 Dihydroorotate dehydrogenase NA29_RS20005 PF01546 Peptidase family M20/M25/M40 NA29_RS20005 PF07687 Peptidase dimerisation domain NA29_RS20025 PF01223 DNA/RNA non-specific endonuclease NA29_RS20030 PF04299 Putative FMN-binding domain NA29_RS20055 PF00156 Phosphoribosyl transferase domain NA29_RS20055 PF01738 Dienelactone hydrolase family NA29_RS20070 PF09339 IclR helix-turn-helix domain NA29_RS20070 PF01614 Bacterial transcriptional regulator NA29_RS20075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NA29_RS20075 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NA29_RS20080 PF03061 Thioesterase superfamily NA29_RS20085 PF01618 MotA/TolQ/ExbB proton channel family NA29_RS20090 PF02472 Biopolymer transport protein ExbD/TolR NA29_RS20100 PF07676 WD40-like Beta Propeller Repeat NA29_RS20100 PF04052 TolB amino-terminal domain NA29_RS20105 PF00691 OmpA family NA29_RS20125 PF03466 LysR substrate binding domain NA29_RS20125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS20135 PF03466 LysR substrate binding domain NA29_RS20135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS20140 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS20140 PF00107 Zinc-binding dehydrogenase NA29_RS20155 PF03466 LysR substrate binding domain NA29_RS20155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS20185 PF00459 Inositol monophosphatase family NA29_RS20195 PF00356 Bacterial regulatory proteins, lacI family NA29_RS20200 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20205 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20210 PF01547 Bacterial extracellular solute-binding protein NA29_RS20220 PF00361 Proton-conducting membrane transporter NA29_RS20220 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NA29_RS20240 PF07690 Major Facilitator Superfamily NA29_RS20245 PF01380 SIS domain NA29_RS20250 PF01037 Lrp/AsnC ligand binding domain NA29_RS20255 PF08220 DeoR-like helix-turn-helix domain NA29_RS20255 PF00455 DeoR C terminal sensor domain NA29_RS20260 PF03009 Glycerophosphoryl diester phosphodiesterase family NA29_RS20265 PF13609 Gram-negative porin NA29_RS20270 PF12852 Cupin NA29_RS20270 PF12833 Helix-turn-helix domain NA29_RS20280 PF02082 Transcriptional regulator NA29_RS20290 PF00689 Cation transporting ATPase, C-terminus NA29_RS20290 PF00690 Cation transporter/ATPase, N-terminus NA29_RS20300 PF04542 Sigma-70 region 2 NA29_RS20300 PF08281 Sigma-70, region 4 NA29_RS20305 PF04773 FecR protein NA29_RS20305 PF16220 Domain of unknown function (DUF4880) NA29_RS20310 PF00593 TonB dependent receptor NA29_RS20310 PF07715 TonB-dependent Receptor Plug Domain NA29_RS20335 PF00925 GTP cyclohydrolase II NA29_RS20340 PF07660 Secretin and TonB N terminus short domain NA29_RS20340 PF07715 TonB-dependent Receptor Plug Domain NA29_RS20340 PF00593 TonB dependent receptor NA29_RS20350 PF00005 ABC transporter NA29_RS20355 PF00664 ABC transporter transmembrane region NA29_RS20355 PF00005 ABC transporter NA29_RS20360 PF01032 FecCD transport family NA29_RS20375 PF01212 Beta-eliminating lyase NA29_RS20380 PF00375 Sodium:dicarboxylate symporter family NA29_RS20385 PF00392 Bacterial regulatory proteins, gntR family NA29_RS20385 PF07729 FCD domain NA29_RS20390 PF00561 alpha/beta hydrolase fold NA29_RS20395 PF01810 LysE type translocator NA29_RS20400 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS20405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS20405 PF03466 LysR substrate binding domain NA29_RS20415 PF09106 Elongation factor SelB, winged helix NA29_RS20415 PF00009 Elongation factor Tu GTP binding domain NA29_RS20415 PF03144 Elongation factor Tu domain 2 NA29_RS20415 PF09107 Elongation factor SelB, winged helix NA29_RS20420 PF03841 L-seryl-tRNA selenium transferase NA29_RS20420 PF12390 Selenocysteine synthase N terminal NA29_RS20425 PF04216 Protein involved in formate dehydrogenase formation NA29_RS20430 PF01292 Prokaryotic cytochrome b561 NA29_RS20435 PF13247 4Fe-4S dicluster domain NA29_RS20435 PF09163 Formate dehydrogenase N, transmembrane NA29_RS20440 PF00384 Molybdopterin oxidoreductase NA29_RS20440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS20440 PF01568 Molydopterin dinucleotide binding domain NA29_RS20445 PF01568 Molydopterin dinucleotide binding domain NA29_RS20445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS20445 PF00384 Molybdopterin oxidoreductase NA29_RS20455 PF04403 Paraquat-inducible protein A NA29_RS20460 PF02470 MlaD protein NA29_RS20470 PF01810 LysE type translocator NA29_RS20480 PF07690 Major Facilitator Superfamily NA29_RS20495 PF00392 Bacterial regulatory proteins, gntR family NA29_RS20495 PF07729 FCD domain NA29_RS20500 PF00723 Glycosyl hydrolases family 15 NA29_RS20505 PF02515 CoA-transferase family III NA29_RS20510 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS20515 PF07729 FCD domain NA29_RS20515 PF00392 Bacterial regulatory proteins, gntR family NA29_RS20520 PF07729 FCD domain NA29_RS20520 PF00392 Bacterial regulatory proteins, gntR family NA29_RS20530 PF07690 Major Facilitator Superfamily NA29_RS20535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS20535 PF03466 LysR substrate binding domain NA29_RS20540 PF02233 NAD(P) transhydrogenase beta subunit NA29_RS20545 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NA29_RS20550 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NA29_RS20550 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NA29_RS20565 PF03466 LysR substrate binding domain NA29_RS20565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS20575 PF02515 CoA-transferase family III NA29_RS20580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS20580 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS20580 PF00989 PAS fold NA29_RS20585 PF02515 CoA-transferase family III NA29_RS20590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS20590 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS20590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS20595 PF07690 Major Facilitator Superfamily NA29_RS20600 PF02558 Ketopantoate reductase PanE/ApbA NA29_RS20600 PF08546 Ketopantoate reductase PanE/ApbA C terminal NA29_RS20605 PF07729 FCD domain NA29_RS20605 PF00392 Bacterial regulatory proteins, gntR family NA29_RS20615 PF00037 4Fe-4S binding domain NA29_RS20615 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NA29_RS20615 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NA29_RS20620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS20620 PF01568 Molydopterin dinucleotide binding domain NA29_RS20620 PF12838 4Fe-4S dicluster domain NA29_RS20620 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NA29_RS20620 PF00384 Molybdopterin oxidoreductase NA29_RS20650 PF00155 Aminotransferase class I and II NA29_RS20655 PF02080 TrkA-C domain NA29_RS20655 PF06826 Predicted Permease Membrane Region NA29_RS20660 PF02080 TrkA-C domain NA29_RS20660 PF06826 Predicted Permease Membrane Region NA29_RS20670 PF01554 MatE NA29_RS20675 PF00459 Inositol monophosphatase family NA29_RS20690 PF00582 Universal stress protein family NA29_RS20695 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20700 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20705 PF13416 Bacterial extracellular solute-binding protein NA29_RS20710 PF00005 ABC transporter NA29_RS20710 PF17912 MalK OB fold domain NA29_RS20730 PF03576 Peptidase family S58 NA29_RS20735 PF12911 N-terminal TM domain of oligopeptide transport permease C NA29_RS20735 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20740 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NA29_RS20750 PF00005 ABC transporter NA29_RS20750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS20755 PF01112 Asparaginase NA29_RS20770 PF02325 YGGT family NA29_RS20775 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS20780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS20780 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS20780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS20785 PF00501 AMP-binding enzyme NA29_RS20785 PF13193 AMP-binding enzyme C-terminal domain NA29_RS20790 PF00106 short chain dehydrogenase NA29_RS20795 PF12833 Helix-turn-helix domain NA29_RS20795 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NA29_RS20800 PF07690 Major Facilitator Superfamily NA29_RS20805 PF13609 Gram-negative porin NA29_RS20810 PF09339 IclR helix-turn-helix domain NA29_RS20810 PF01614 Bacterial transcriptional regulator NA29_RS20825 PF00766 Electron transfer flavoprotein FAD-binding domain NA29_RS20825 PF01012 Electron transfer flavoprotein domain NA29_RS20830 PF01012 Electron transfer flavoprotein domain NA29_RS20835 PF07690 Major Facilitator Superfamily NA29_RS20840 PF04909 Amidohydrolase NA29_RS20845 PF02913 FAD linked oxidases, C-terminal domain NA29_RS20845 PF01565 FAD binding domain NA29_RS20850 PF07729 FCD domain NA29_RS20850 PF00392 Bacterial regulatory proteins, gntR family NA29_RS20860 PF00909 Ammonium Transporter Family NA29_RS20915 PF09339 IclR helix-turn-helix domain NA29_RS20915 PF01614 Bacterial transcriptional regulator NA29_RS20920 PF07836 DmpG-like communication domain NA29_RS20920 PF00682 HMGL-like NA29_RS20925 PF01118 Semialdehyde dehydrogenase, NAD binding domain NA29_RS20925 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation NA29_RS20930 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP NA29_RS20935 PF07690 Major Facilitator Superfamily NA29_RS20950 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS20955 PF03551 Transcriptional regulator PadR-like family NA29_RS20960 PF08021 Siderophore-interacting FAD-binding domain NA29_RS20960 PF04954 Siderophore-interacting protein NA29_RS20970 PF00106 short chain dehydrogenase NA29_RS20985 PF00483 Nucleotidyl transferase NA29_RS20995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS20995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS21000 PF00266 Aminotransferase class-V NA29_RS21005 PF02780 Transketolase, C-terminal domain NA29_RS21005 PF02779 Transketolase, pyrimidine binding domain NA29_RS21005 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NA29_RS21020 PF02401 LytB protein NA29_RS21025 PF04055 Radical SAM superfamily NA29_RS21030 PF01370 NAD dependent epimerase/dehydratase family NA29_RS21035 PF00535 Glycosyl transferase family 2 NA29_RS21045 PF13243 Squalene-hopene cyclase C-terminal domain NA29_RS21045 PF13249 Squalene-hopene cyclase N-terminal domain NA29_RS21050 PF01593 Flavin containing amine oxidoreductase NA29_RS21070 PF03060 Nitronate monooxygenase NA29_RS21090 PF00510 Cytochrome c oxidase subunit III NA29_RS21095 PF00115 Cytochrome C and Quinol oxidase polypeptide I NA29_RS21100 PF06481 COX Aromatic Rich Motif NA29_RS21100 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NA29_RS21110 PF00486 Transcriptional regulatory protein, C terminal NA29_RS21110 PF00072 Response regulator receiver domain NA29_RS21115 PF16736 Single Cache-like NA29_RS21115 PF00989 PAS fold NA29_RS21115 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS21115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS21120 PF12848 ABC transporter NA29_RS21120 PF00005 ABC transporter NA29_RS21130 PF03466 LysR substrate binding domain NA29_RS21130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS21145 PF07883 Cupin domain NA29_RS21155 PF02321 Outer membrane efflux protein NA29_RS21160 PF12704 MacB-like periplasmic core domain NA29_RS21160 PF02687 FtsX-like permease family NA29_RS21160 PF00005 ABC transporter NA29_RS21165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NA29_RS21170 PF03458 UPF0126 domain NA29_RS21180 PF00285 Citrate synthase, C-terminal domain NA29_RS21185 PF07690 Major Facilitator Superfamily NA29_RS21190 PF09084 NMT1/THI5 like NA29_RS21195 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS21210 PF02667 Short chain fatty acid transporter NA29_RS21215 PF02423 Ornithine cyclodeaminase/mu-crystallin family NA29_RS21220 PF00384 Molybdopterin oxidoreductase NA29_RS21220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS21220 PF01568 Molydopterin dinucleotide binding domain NA29_RS21225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS21225 PF03466 LysR substrate binding domain NA29_RS21230 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NA29_RS21235 PF07005 Sugar-binding N-terminal domain NA29_RS21235 PF17042 Nucleotide-binding C-terminal domain NA29_RS21240 PF03812 2-keto-3-deoxygluconate permease NA29_RS21245 PF08220 DeoR-like helix-turn-helix domain NA29_RS21245 PF00455 DeoR C terminal sensor domain NA29_RS21255 PF01118 Semialdehyde dehydrogenase, NAD binding domain NA29_RS21260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS21265 PF04444 Catechol dioxygenase N terminus NA29_RS21265 PF00775 Dioxygenase NA29_RS21270 PF01638 HxlR-like helix-turn-helix NA29_RS21280 PF00474 Sodium:solute symporter family NA29_RS21290 PF01177 Asp/Glu/Hydantoin racemase NA29_RS21305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS21305 PF03466 LysR substrate binding domain NA29_RS21310 PF00106 short chain dehydrogenase NA29_RS21315 PF00072 Response regulator receiver domain NA29_RS21315 PF00486 Transcriptional regulatory protein, C terminal NA29_RS21325 PF01618 MotA/TolQ/ExbB proton channel family NA29_RS21330 PF02472 Biopolymer transport protein ExbD/TolR NA29_RS21345 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NA29_RS21345 PF13378 Enolase C-terminal domain-like NA29_RS21350 PF00144 Beta-lactamase NA29_RS21350 PF07930 D-aminopeptidase, domain B NA29_RS21355 PF00144 Beta-lactamase NA29_RS21360 PF00593 TonB dependent receptor NA29_RS21360 PF07715 TonB-dependent Receptor Plug Domain NA29_RS21365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS21365 PF00672 HAMP domain NA29_RS21365 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS21370 PF07171 MlrC C-terminus NA29_RS21370 PF07364 Metallopeptidase family M81 NA29_RS21375 PF01266 FAD dependent oxidoreductase NA29_RS21385 PF01381 Helix-turn-helix NA29_RS21385 PF07883 Cupin domain NA29_RS21395 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS21400 PF00005 ABC transporter NA29_RS21405 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NA29_RS21415 PF00005 ABC transporter NA29_RS21430 PF00171 Aldehyde dehydrogenase family NA29_RS21435 PF00970 Oxidoreductase FAD-binding domain NA29_RS21435 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS21440 PF04909 Amidohydrolase NA29_RS21445 PF00355 Rieske [2Fe-2S] domain NA29_RS21450 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS21450 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit NA29_RS21455 PF00355 Rieske [2Fe-2S] domain NA29_RS21460 PF07683 Cobalamin synthesis protein cobW C-terminal domain NA29_RS21460 PF02492 CobW/HypB/UreG, nucleotide-binding domain NA29_RS21465 PF07729 FCD domain NA29_RS21465 PF00392 Bacterial regulatory proteins, gntR family NA29_RS21470 PF03737 Aldolase/RraA NA29_RS21475 PF00180 Isocitrate/isopropylmalate dehydrogenase NA29_RS21475 PF03737 Aldolase/RraA NA29_RS21480 PF03737 Aldolase/RraA NA29_RS21485 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS21485 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit NA29_RS21490 PF07690 Major Facilitator Superfamily NA29_RS21505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS21505 PF00034 Cytochrome c NA29_RS21520 PF16859 Tetracyclin repressor-like, C-terminal domain NA29_RS21520 PF00440 Bacterial regulatory proteins, tetR family NA29_RS21525 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS21530 PF07690 Major Facilitator Superfamily NA29_RS21535 PF13193 AMP-binding enzyme C-terminal domain NA29_RS21535 PF00501 AMP-binding enzyme NA29_RS21545 PF02403 Seryl-tRNA synthetase N-terminal domain NA29_RS21545 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NA29_RS21550 PF12002 MgsA AAA+ ATPase C terminal NA29_RS21550 PF16193 AAA C-terminal domain NA29_RS21550 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS21555 PF03548 Outer membrane lipoprotein carrier protein LolA NA29_RS21560 PF01580 FtsK/SpoIIIE family NA29_RS21560 PF09397 Ftsk gamma domain NA29_RS21560 PF17854 FtsK alpha domain NA29_RS21560 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NA29_RS21565 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS21570 PF01713 Smr domain NA29_RS21570 PF00488 MutS domain V NA29_RS21575 PF03458 UPF0126 domain NA29_RS21580 PF00543 Nitrogen regulatory protein P-II NA29_RS21585 PF00795 Carbon-nitrogen hydrolase NA29_RS21585 PF02540 NAD synthase NA29_RS21595 PF02525 Flavodoxin-like fold NA29_RS21605 PF00719 Inorganic pyrophosphatase NA29_RS21610 PF01070 FMN-dependent dehydrogenase NA29_RS21620 PF00701 Dihydrodipicolinate synthetase family NA29_RS21625 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS21630 PF00005 ABC transporter NA29_RS21630 PF08402 TOBE domain NA29_RS21640 PF02913 FAD linked oxidases, C-terminal domain NA29_RS21640 PF01565 FAD binding domain NA29_RS21645 PF00171 Aldehyde dehydrogenase family NA29_RS21655 PF07690 Major Facilitator Superfamily NA29_RS21660 PF07690 Major Facilitator Superfamily NA29_RS21675 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NA29_RS21675 PF03900 Porphobilinogen deaminase, C-terminal domain NA29_RS21680 PF00311 Phosphoenolpyruvate carboxylase NA29_RS21690 PF14698 Argininosuccinate lyase C-terminal NA29_RS21690 PF00206 Lyase NA29_RS21695 PF03616 Sodium/glutamate symporter NA29_RS21700 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NA29_RS21700 PF01276 Orn/Lys/Arg decarboxylase, major domain NA29_RS21700 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NA29_RS21705 PF00692 dUTPase NA29_RS21710 PF10609 NUBPL iron-transfer P-loop NTPase NA29_RS21715 PF00691 OmpA family NA29_RS21715 PF13488 Glycine zipper NA29_RS21720 PF09334 tRNA synthetases class I (M) NA29_RS21720 PF01588 Putative tRNA binding domain NA29_RS21725 PF13404 AsnC-type helix-turn-helix domain NA29_RS21725 PF01037 Lrp/AsnC ligand binding domain NA29_RS21740 PF04357 TamB, inner membrane protein subunit of TAM complex NA29_RS21755 PF02616 Segregation and condensation protein ScpA NA29_RS21760 PF02569 Pantoate-beta-alanine ligase NA29_RS21765 PF02261 Aspartate decarboxylase NA29_RS21770 PF01883 Iron-sulfur cluster assembly protein NA29_RS21770 PF10609 NUBPL iron-transfer P-loop NTPase NA29_RS21775 PF07685 CobB/CobQ-like glutamine amidotransferase domain NA29_RS21775 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NA29_RS21780 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NA29_RS21785 PF17113 Regulatory signalling modulator protein AmpE NA29_RS21785 PF03186 CobD/Cbib protein NA29_RS21790 PF00155 Aminotransferase class I and II NA29_RS21800 PF01497 Periplasmic binding protein NA29_RS21810 PF02654 Cobalamin-5-phosphate synthase NA29_RS21815 PF02277 Phosphoribosyltransferase NA29_RS21820 PF12557 Cob(I)alamin adenosyltransferase N terminal NA29_RS21820 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NA29_RS21825 PF00005 ABC transporter NA29_RS21830 PF01032 FecCD transport family NA29_RS21835 PF00593 TonB dependent receptor NA29_RS21835 PF07715 TonB-dependent Receptor Plug Domain NA29_RS21850 PF12806 Acetyl-CoA dehydrogenase C-terminal like NA29_RS21850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS21850 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS21850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS21855 PF00766 Electron transfer flavoprotein FAD-binding domain NA29_RS21855 PF01012 Electron transfer flavoprotein domain NA29_RS21860 PF01012 Electron transfer flavoprotein domain NA29_RS21865 PF00561 alpha/beta hydrolase fold NA29_RS21870 PF00175 Oxidoreductase NAD-binding domain NA29_RS21870 PF00970 Oxidoreductase FAD-binding domain NA29_RS21875 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS21880 PF00850 Histone deacetylase domain NA29_RS21885 PF13406 Transglycosylase SLT domain NA29_RS21890 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS21900 PF01370 NAD dependent epimerase/dehydratase family NA29_RS21905 PF00294 pfkB family carbohydrate kinase NA29_RS21910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NA29_RS21910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NA29_RS21910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NA29_RS21915 PF18073 Rubredoxin metal binding domain NA29_RS21925 PF00216 Bacterial DNA-binding protein NA29_RS21930 PF00575 S1 RNA binding domain NA29_RS21935 PF02224 Cytidylate kinase NA29_RS21940 PF01566 Natural resistance-associated macrophage protein NA29_RS21945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NA29_RS21950 PF01842 ACT domain NA29_RS21950 PF02153 Prephenate dehydrogenase NA29_RS21955 PF00800 Prephenate dehydratase NA29_RS21955 PF01817 Chorismate mutase type II NA29_RS21955 PF01842 ACT domain NA29_RS21960 PF00266 Aminotransferase class-V NA29_RS21970 PF00521 DNA gyrase/topoisomerase IV, subunit A NA29_RS21970 PF03989 DNA gyrase C-terminal domain, beta-propeller NA29_RS21975 PF00691 OmpA family NA29_RS21995 PF00501 AMP-binding enzyme NA29_RS21995 PF13193 AMP-binding enzyme C-terminal domain NA29_RS22000 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS22010 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NA29_RS22020 PF03480 Bacterial extracellular solute-binding protein, family 7 NA29_RS22025 PF00392 Bacterial regulatory proteins, gntR family NA29_RS22025 PF07729 FCD domain NA29_RS22030 PF01790 Prolipoprotein diacylglyceryl transferase NA29_RS22035 PF03466 LysR substrate binding domain NA29_RS22035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS22040 PF00920 Dehydratase family NA29_RS22045 PF00920 Dehydratase family NA29_RS22060 PF04364 DNA polymerase III chi subunit, HolC NA29_RS22065 PF00883 Cytosol aminopeptidase family, catalytic domain NA29_RS22065 PF02789 Cytosol aminopeptidase family, N-terminal domain NA29_RS22070 PF03739 Lipopolysaccharide export system permease LptF/LptG NA29_RS22105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NA29_RS22110 PF00009 Elongation factor Tu GTP binding domain NA29_RS22115 PF01507 Phosphoadenosine phosphosulfate reductase family NA29_RS22120 PF01507 Phosphoadenosine phosphosulfate reductase family NA29_RS22125 PF01925 Sulfite exporter TauE/SafE NA29_RS22130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS22130 PF03466 LysR substrate binding domain NA29_RS22215 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH NA29_RS22225 PF04960 Glutaminase NA29_RS22250 PF01494 FAD binding domain NA29_RS22275 PF00355 Rieske [2Fe-2S] domain NA29_RS22280 PF12833 Helix-turn-helix domain NA29_RS22280 PF12852 Cupin NA29_RS22285 PF00255 Glutathione peroxidase NA29_RS22295 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS22295 PF00970 Oxidoreductase FAD-binding domain NA29_RS22300 PF01042 Endoribonuclease L-PSP NA29_RS22305 PF00355 Rieske [2Fe-2S] domain NA29_RS22320 PF09084 NMT1/THI5 like NA29_RS22325 PF00171 Aldehyde dehydrogenase family NA29_RS22330 PF03447 Homoserine dehydrogenase, NAD binding domain NA29_RS22330 PF01958 Domain of unknown function DUF108 NA29_RS22335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS22335 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS22335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS22340 PF00106 short chain dehydrogenase NA29_RS22345 PF09339 IclR helix-turn-helix domain NA29_RS22345 PF01614 Bacterial transcriptional regulator NA29_RS22350 PF12697 Alpha/beta hydrolase family NA29_RS22365 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS22370 PF00005 ABC transporter NA29_RS22380 PF01494 FAD binding domain NA29_RS22405 PF07690 Major Facilitator Superfamily NA29_RS22410 PF00012 Hsp70 protein NA29_RS22415 PF02447 GntP family permease NA29_RS22420 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus NA29_RS22420 PF01048 Phosphorylase superfamily NA29_RS22425 PF07311 Dodecin NA29_RS22430 PF01047 MarR family NA29_RS22435 PF02685 Glucokinase NA29_RS22435 PF01380 SIS domain NA29_RS22435 PF01418 Helix-turn-helix domain, rpiR family NA29_RS22440 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NA29_RS22445 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NA29_RS22445 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NA29_RS22450 PF00920 Dehydratase family NA29_RS22460 PF00701 Dihydrodipicolinate synthetase family NA29_RS22475 PF00690 Cation transporter/ATPase, N-terminus NA29_RS22475 PF00689 Cation transporting ATPase, C-terminus NA29_RS22485 PF01569 PAP2 superfamily NA29_RS22490 PF14760 Rnk N-terminus NA29_RS22490 PF01272 Transcription elongation factor, GreA/GreB, C-term NA29_RS22495 PF00202 Aminotransferase class-III NA29_RS22500 PF04011 LemA family NA29_RS22515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NA29_RS22515 PF01872 RibD C-terminal domain NA29_RS22520 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS22525 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS22535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS22535 PF03466 LysR substrate binding domain NA29_RS22540 PF13458 Periplasmic binding protein NA29_RS22545 PF02653 Branched-chain amino acid transport system / permease component NA29_RS22550 PF11862 Domain of unknown function (DUF3382) NA29_RS22550 PF02653 Branched-chain amino acid transport system / permease component NA29_RS22555 PF00005 ABC transporter NA29_RS22555 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS22560 PF00005 ABC transporter NA29_RS22570 PF01022 Bacterial regulatory protein, arsR family NA29_RS22575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NA29_RS22575 PF00925 GTP cyclohydrolase II NA29_RS22580 PF00885 6,7-dimethyl-8-ribityllumazine synthase NA29_RS22585 PF01029 NusB family NA29_RS22590 PF00155 Aminotransferase class I and II NA29_RS22595 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NA29_RS22595 PF01464 Transglycosylase SLT domain NA29_RS22600 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NA29_RS22605 PF00171 Aldehyde dehydrogenase family NA29_RS22610 PF13520 Amino acid permease NA29_RS22615 PF03707 Bacterial signalling protein N terminal repeat NA29_RS22615 PF00563 EAL domain NA29_RS22615 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS22620 PF03180 NLPA lipoprotein NA29_RS22625 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS22630 PF09383 NIL domain NA29_RS22630 PF00005 ABC transporter NA29_RS22635 PF00072 Response regulator receiver domain NA29_RS22635 PF01339 CheB methylesterase NA29_RS22640 PF00196 Bacterial regulatory proteins, luxR family NA29_RS22640 PF00072 Response regulator receiver domain NA29_RS22660 PF07730 Histidine kinase NA29_RS22660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS22665 PF05532 CsbD-like NA29_RS22685 PF13426 PAS domain NA29_RS22685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS22685 PF00672 HAMP domain NA29_RS22690 PF03466 LysR substrate binding domain NA29_RS22690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS22705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS22705 PF03466 LysR substrate binding domain NA29_RS22720 PF00486 Transcriptional regulatory protein, C terminal NA29_RS22720 PF00072 Response regulator receiver domain NA29_RS22725 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS22725 PF00672 HAMP domain NA29_RS22725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS22730 PF13609 Gram-negative porin NA29_RS22735 PF00005 ABC transporter NA29_RS22735 PF17912 MalK OB fold domain NA29_RS22745 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS22750 PF07690 Major Facilitator Superfamily NA29_RS22755 PF13193 AMP-binding enzyme C-terminal domain NA29_RS22755 PF00501 AMP-binding enzyme NA29_RS22760 PF00171 Aldehyde dehydrogenase family NA29_RS22765 PF01614 Bacterial transcriptional regulator NA29_RS22765 PF09339 IclR helix-turn-helix domain NA29_RS22780 PF07993 Male sterility protein NA29_RS22780 PF00668 Condensation domain NA29_RS22780 PF13193 AMP-binding enzyme C-terminal domain NA29_RS22780 PF00501 AMP-binding enzyme NA29_RS22780 PF00550 Phosphopantetheine attachment site NA29_RS22790 PF00155 Aminotransferase class I and II NA29_RS22795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS22795 PF03466 LysR substrate binding domain NA29_RS22800 PF00158 Sigma-54 interaction domain NA29_RS22800 PF02954 Bacterial regulatory protein, Fis family NA29_RS22800 PF01590 GAF domain NA29_RS22805 PF00248 Aldo/keto reductase family NA29_RS22815 PF13192 Thioredoxin domain NA29_RS22815 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS22820 PF10417 C-terminal domain of 1-Cys peroxiredoxin NA29_RS22820 PF00578 AhpC/TSA family NA29_RS22835 PF00271 Helicase conserved C-terminal domain NA29_RS22835 PF00270 DEAD/DEAH box helicase NA29_RS22850 PF03606 C4-dicarboxylate anaerobic carrier NA29_RS22865 PF13609 Gram-negative porin NA29_RS22890 PF07690 Major Facilitator Superfamily NA29_RS22900 PF01494 FAD binding domain NA29_RS22905 PF02311 AraC-like ligand binding domain NA29_RS22905 PF12833 Helix-turn-helix domain NA29_RS22910 PF12146 Serine aminopeptidase, S33 NA29_RS22915 PF02627 Carboxymuconolactone decarboxylase family NA29_RS22920 PF10397 Adenylosuccinate lyase C-terminus NA29_RS22920 PF00206 Lyase NA29_RS22930 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NA29_RS22930 PF00775 Dioxygenase NA29_RS22935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS22935 PF03466 LysR substrate binding domain NA29_RS22945 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS22945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS22945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS22945 PF12806 Acetyl-CoA dehydrogenase C-terminal like NA29_RS22950 PF13193 AMP-binding enzyme C-terminal domain NA29_RS22950 PF00501 AMP-binding enzyme NA29_RS22955 PF00171 Aldehyde dehydrogenase family NA29_RS22960 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS22965 PF13609 Gram-negative porin NA29_RS22970 PF07690 Major Facilitator Superfamily NA29_RS22980 PF00072 Response regulator receiver domain NA29_RS22995 PF00672 HAMP domain NA29_RS22995 PF16591 Helical bimodular sensor domain NA29_RS22995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS23000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS23000 PF01627 Hpt domain NA29_RS23000 PF07194 P2 response regulator binding domain NA29_RS23000 PF02895 Signal transducing histidine kinase, homodimeric domain NA29_RS23000 PF01584 CheW-like domain NA29_RS23005 PF03466 LysR substrate binding domain NA29_RS23005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23010 PF01494 FAD binding domain NA29_RS23015 PF07690 Major Facilitator Superfamily NA29_RS23025 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS23025 PF12911 N-terminal TM domain of oligopeptide transport permease C NA29_RS23030 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS23035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NA29_RS23040 PF00005 ABC transporter NA29_RS23040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS23045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS23045 PF00005 ABC transporter NA29_RS23050 PF03466 LysR substrate binding domain NA29_RS23050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23055 PF07690 Major Facilitator Superfamily NA29_RS23055 PF00083 Sugar (and other) transporter NA29_RS23060 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NA29_RS23060 PF06481 COX Aromatic Rich Motif NA29_RS23065 PF00115 Cytochrome C and Quinol oxidase polypeptide I NA29_RS23070 PF00510 Cytochrome c oxidase subunit III NA29_RS23075 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NA29_RS23085 PF00392 Bacterial regulatory proteins, gntR family NA29_RS23085 PF00155 Aminotransferase class I and II NA29_RS23100 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS23105 PF09383 NIL domain NA29_RS23105 PF00005 ABC transporter NA29_RS23110 PF03180 NLPA lipoprotein NA29_RS23115 PF00768 D-alanyl-D-alanine carboxypeptidase NA29_RS23120 PF07690 Major Facilitator Superfamily NA29_RS23125 PF03169 OPT oligopeptide transporter protein NA29_RS23130 PF00583 Acetyltransferase (GNAT) family NA29_RS23160 PF01636 Phosphotransferase enzyme family NA29_RS23165 PF04307 LexA-binding, inner membrane-associated putative hydrolase NA29_RS23230 PF08274 PhnA Zinc-Ribbon NA29_RS23230 PF03831 PhnA domain NA29_RS23245 PF00005 ABC transporter NA29_RS23255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NA29_RS23260 PF04324 BFD-like [2Fe-2S] binding domain NA29_RS23260 PF01568 Molydopterin dinucleotide binding domain NA29_RS23260 PF00384 Molybdopterin oxidoreductase NA29_RS23260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS23270 PF18267 Rubredoxin NAD+ reductase C-terminal domain NA29_RS23270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NA29_RS23270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NA29_RS23270 PF04324 BFD-like [2Fe-2S] binding domain NA29_RS23270 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS23280 PF01613 Flavin reductase like domain NA29_RS23290 PF03466 LysR substrate binding domain NA29_RS23290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23295 PF00083 Sugar (and other) transporter NA29_RS23300 PF03466 LysR substrate binding domain NA29_RS23300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23305 PF03466 LysR substrate binding domain NA29_RS23310 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS23310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS23310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS23330 PF13533 Biotin-lipoyl like NA29_RS23335 PF02321 Outer membrane efflux protein NA29_RS23345 PF03472 Autoinducer binding domain NA29_RS23345 PF00196 Bacterial regulatory proteins, luxR family NA29_RS23350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23350 PF03466 LysR substrate binding domain NA29_RS23360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23360 PF03466 LysR substrate binding domain NA29_RS23365 PF00881 Nitroreductase family NA29_RS23370 PF02321 Outer membrane efflux protein NA29_RS23375 PF00873 AcrB/AcrD/AcrF family NA29_RS23380 PF00529 HlyD membrane-fusion protein of T1SS NA29_RS23380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NA29_RS23385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23385 PF03466 LysR substrate binding domain NA29_RS23395 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NA29_RS23410 PF00202 Aminotransferase class-III NA29_RS23415 PF00893 Small Multidrug Resistance protein NA29_RS23420 PF00155 Aminotransferase class I and II NA29_RS23425 PF12833 Helix-turn-helix domain NA29_RS23425 PF12852 Cupin NA29_RS23445 PF00501 AMP-binding enzyme NA29_RS23445 PF13193 AMP-binding enzyme C-terminal domain NA29_RS23450 PF00108 Thiolase, N-terminal domain NA29_RS23450 PF02803 Thiolase, C-terminal domain NA29_RS23455 PF03480 Bacterial extracellular solute-binding protein, family 7 NA29_RS23460 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NA29_RS23470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23470 PF03466 LysR substrate binding domain NA29_RS23475 PF02954 Bacterial regulatory protein, Fis family NA29_RS23475 PF00158 Sigma-54 interaction domain NA29_RS23475 PF01590 GAF domain NA29_RS23480 PF13609 Gram-negative porin NA29_RS23485 PF07722 Peptidase C26 NA29_RS23495 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS23495 PF00107 Zinc-binding dehydrogenase NA29_RS23500 PF02142 MGS-like domain NA29_RS23505 PF00106 short chain dehydrogenase NA29_RS23520 PF05872 Bacterial protein of unknown function (DUF853) NA29_RS23525 PF01709 Transcriptional regulator NA29_RS23530 PF02844 Phosphoribosylglycinamide synthetase, N domain NA29_RS23530 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NA29_RS23530 PF02843 Phosphoribosylglycinamide synthetase, C domain NA29_RS23535 PF00924 Mechanosensitive ion channel NA29_RS23535 PF05552 Conserved TM helix NA29_RS23540 PF01218 Coproporphyrinogen III oxidase NA29_RS23545 PF01467 Cytidylyltransferase-like NA29_RS23555 PF02590 Predicted SPOUT methyltransferase NA29_RS23560 PF13416 Bacterial extracellular solute-binding protein NA29_RS23565 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS23570 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS23575 PF17912 MalK OB fold domain NA29_RS23575 PF00005 ABC transporter NA29_RS23580 PF03009 Glycerophosphoryl diester phosphodiesterase family NA29_RS23585 PF02545 Maf-like protein NA29_RS23590 PF10150 Ribonuclease E/G family NA29_RS23590 PF00575 S1 RNA binding domain NA29_RS23595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS23600 PF16916 Dimerisation domain of Zinc Transporter NA29_RS23600 PF01545 Cation efflux family NA29_RS23605 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NA29_RS23610 PF00483 Nucleotidyl transferase NA29_RS23615 PF16363 GDP-mannose 4,6 dehydratase NA29_RS23625 PF00664 ABC transporter transmembrane region NA29_RS23625 PF00005 ABC transporter NA29_RS23630 PF16124 RecQ zinc-binding NA29_RS23630 PF00570 HRDC domain NA29_RS23630 PF00271 Helicase conserved C-terminal domain NA29_RS23630 PF09382 RQC domain NA29_RS23630 PF00270 DEAD/DEAH box helicase NA29_RS23635 PF00535 Glycosyl transferase family 2 NA29_RS23645 PF07733 Bacterial DNA polymerase III alpha NTPase domain NA29_RS23645 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NA29_RS23645 PF14579 Helix-hairpin-helix motif NA29_RS23645 PF01336 OB-fold nucleic acid binding domain NA29_RS23645 PF02811 PHP domain NA29_RS23650 PF00581 Rhodanese-like domain NA29_RS23650 PF17773 UPF0176 acylphosphatase like domain NA29_RS23655 PF00749 tRNA synthetases class I (E and Q), catalytic domain NA29_RS23660 PF00271 Helicase conserved C-terminal domain NA29_RS23660 PF00270 DEAD/DEAH box helicase NA29_RS23665 PF13593 SBF-like CPA transporter family (DUF4137) NA29_RS23670 PF03466 LysR substrate binding domain NA29_RS23670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23680 PF03358 NADPH-dependent FMN reductase NA29_RS23685 PF00905 Penicillin binding protein transpeptidase domain NA29_RS23695 PF13667 ThiC-associated domain NA29_RS23695 PF01964 Radical SAM ThiC family NA29_RS23705 PF00571 CBS domain NA29_RS23705 PF01595 Cyclin M transmembrane N-terminal domain NA29_RS23705 PF03471 Transporter associated domain NA29_RS23710 PF13538 UvrD-like helicase C-terminal domain NA29_RS23715 PF13361 UvrD-like helicase C-terminal domain NA29_RS23715 PF00580 UvrD/REP helicase N-terminal domain NA29_RS23715 PF12705 PD-(D/E)XK nuclease superfamily NA29_RS23720 PF17946 RecC C-terminal domain NA29_RS23725 PF12805 FUSC-like inner membrane protein yccS NA29_RS23730 PF00072 Response regulator receiver domain NA29_RS23730 PF00196 Bacterial regulatory proteins, luxR family NA29_RS23735 PF02321 Outer membrane efflux protein NA29_RS23740 PF00873 AcrB/AcrD/AcrF family NA29_RS23745 PF00873 AcrB/AcrD/AcrF family NA29_RS23750 PF13533 Biotin-lipoyl like NA29_RS23755 PF00486 Transcriptional regulatory protein, C terminal NA29_RS23755 PF00072 Response regulator receiver domain NA29_RS23760 PF00672 HAMP domain NA29_RS23760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS23760 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS23770 PF13302 Acetyltransferase (GNAT) domain NA29_RS23775 PF07690 Major Facilitator Superfamily NA29_RS23785 PF04143 Sulphur transport NA29_RS23795 PF00753 Metallo-beta-lactamase superfamily NA29_RS23800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23800 PF03466 LysR substrate binding domain NA29_RS23815 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS23820 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS23825 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS23830 PF01515 Phosphate acetyl/butaryl transferase NA29_RS23830 PF03949 Malic enzyme, NAD binding domain NA29_RS23830 PF00390 Malic enzyme, N-terminal domain NA29_RS23840 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NA29_RS23845 PF02311 AraC-like ligand binding domain NA29_RS23845 PF12833 Helix-turn-helix domain NA29_RS23850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NA29_RS23855 PF03707 Bacterial signalling protein N terminal repeat NA29_RS23855 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS23855 PF00563 EAL domain NA29_RS23860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23860 PF03466 LysR substrate binding domain NA29_RS23865 PF00330 Aconitase family (aconitate hydratase) NA29_RS23870 PF00694 Aconitase C-terminal domain NA29_RS23875 PF03390 2-hydroxycarboxylate transporter family NA29_RS23885 PF03976 Polyphosphate kinase 2 (PPK2) NA29_RS23890 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS23890 PF00672 HAMP domain NA29_RS23890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS23895 PF00486 Transcriptional regulatory protein, C terminal NA29_RS23895 PF00072 Response regulator receiver domain NA29_RS23905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NA29_RS23910 PF02687 FtsX-like permease family NA29_RS23910 PF00005 ABC transporter NA29_RS23910 PF12704 MacB-like periplasmic core domain NA29_RS23915 PF02321 Outer membrane efflux protein NA29_RS23925 PF00970 Oxidoreductase FAD-binding domain NA29_RS23925 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS23925 PF00175 Oxidoreductase NAD-binding domain NA29_RS23930 PF00202 Aminotransferase class-III NA29_RS23940 PF00583 Acetyltransferase (GNAT) family NA29_RS23945 PF00005 ABC transporter NA29_RS23950 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS23950 PF00005 ABC transporter NA29_RS23955 PF02653 Branched-chain amino acid transport system / permease component NA29_RS23955 PF11862 Domain of unknown function (DUF3382) NA29_RS23960 PF02653 Branched-chain amino acid transport system / permease component NA29_RS23965 PF13458 Periplasmic binding protein NA29_RS23970 PF02401 LytB protein NA29_RS23975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NA29_RS23980 PF04002 RadC-like JAB domain NA29_RS23985 PF00830 Ribosomal L28 family NA29_RS23990 PF00471 Ribosomal protein L33 NA29_RS23995 PF00890 FAD binding domain NA29_RS23995 PF02910 Fumarate reductase flavoprotein C-term NA29_RS24000 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NA29_RS24000 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NA29_RS24005 PF02445 Quinolinate synthetase A protein NA29_RS24015 PF12794 Mechanosensitive ion channel inner membrane domain 1 NA29_RS24015 PF00924 Mechanosensitive ion channel NA29_RS24015 PF12795 Mechanosensitive ion channel porin domain NA29_RS24020 PF01189 16S rRNA methyltransferase RsmB/F NA29_RS24020 PF01029 NusB family NA29_RS24025 PF00551 Formyl transferase NA29_RS24030 PF06574 FAD synthetase NA29_RS24030 PF01687 Riboflavin kinase NA29_RS24035 PF00133 tRNA synthetases class I (I, L, M and V) NA29_RS24035 PF06827 Zinc finger found in FPG and IleRS NA29_RS24035 PF08264 Anticodon-binding domain of tRNA NA29_RS24040 PF01252 Signal peptidase (SPase) II NA29_RS24045 PF04127 DNA / pantothenate metabolism flavoprotein NA29_RS24045 PF02441 Flavoprotein NA29_RS24050 PF07690 Major Facilitator Superfamily NA29_RS24055 PF00296 Luciferase-like monooxygenase NA29_RS24060 PF00692 dUTPase NA29_RS24065 PF17871 AAA lid domain NA29_RS24065 PF02861 Clp amino terminal domain, pathogenicity island component NA29_RS24065 PF07724 AAA domain (Cdc48 subfamily) NA29_RS24065 PF10431 C-terminal, D2-small domain, of ClpB protein NA29_RS24065 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS24070 PF02617 ATP-dependent Clp protease adaptor protein ClpS NA29_RS24075 PF00313 'Cold-shock' DNA-binding domain NA29_RS24080 PF00355 Rieske [2Fe-2S] domain NA29_RS24085 PF13577 SnoaL-like domain NA29_RS24090 PF00355 Rieske [2Fe-2S] domain NA29_RS24090 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NA29_RS24095 PF00175 Oxidoreductase NAD-binding domain NA29_RS24095 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS24095 PF00970 Oxidoreductase FAD-binding domain NA29_RS24100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS24100 PF03466 LysR substrate binding domain NA29_RS24115 PF03466 LysR substrate binding domain NA29_RS24115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS24140 PF00180 Isocitrate/isopropylmalate dehydrogenase NA29_RS24145 PF00849 RNA pseudouridylate synthase NA29_RS24165 PF11849 Domain of unknown function (DUF3369) NA29_RS24170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NA29_RS24170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NA29_RS24175 PF13742 OB-fold nucleic acid binding domain NA29_RS24175 PF02601 Exonuclease VII, large subunit NA29_RS24180 PF01618 MotA/TolQ/ExbB proton channel family NA29_RS24190 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NA29_RS24195 PF03966 Trm112p-like protein NA29_RS24200 PF02348 Cytidylyltransferase NA29_RS24205 PF05191 Adenylate kinase, active site lid NA29_RS24210 PF00106 short chain dehydrogenase NA29_RS24220 PF13369 Transglutaminase-like superfamily NA29_RS24225 PF03023 Lipid II flippase MurJ NA29_RS24230 PF01649 Ribosomal protein S20 NA29_RS24240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NA29_RS24240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NA29_RS24245 PF06865 Pyrimidine/purine nucleoside phosphorylase NA29_RS24255 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NA29_RS24255 PF01565 FAD binding domain NA29_RS24260 PF04461 Protein of unknown function (DUF520) NA29_RS24265 PF02660 Glycerol-3-phosphate acyltransferase NA29_RS24270 PF00072 Response regulator receiver domain NA29_RS24270 PF00196 Bacterial regulatory proteins, luxR family NA29_RS24280 PF15976 CS1-pili formation C-terminal NA29_RS24280 PF16967 E-set like domain NA29_RS24280 PF17271 TcfC Usher-like barrel domain NA29_RS24285 PF04449 CS1 type fimbrial major subunit NA29_RS24295 PF04073 Aminoacyl-tRNA editing domain NA29_RS24300 PF00501 AMP-binding enzyme NA29_RS24300 PF13193 AMP-binding enzyme C-terminal domain NA29_RS24305 PF02899 Phage integrase, N-terminal SAM-like domain NA29_RS24305 PF00589 Phage integrase family NA29_RS24310 PF08331 Domain of unknown function (DUF1730) NA29_RS24315 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NA29_RS24320 PF01520 N-acetylmuramoyl-L-alanine amidase NA29_RS24320 PF11741 AMIN domain NA29_RS24325 PF09335 SNARE associated Golgi protein NA29_RS24330 PF01119 DNA mismatch repair protein, C-terminal domain NA29_RS24330 PF08676 MutL C terminal dimerisation domain NA29_RS24340 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS24345 PF00005 ABC transporter NA29_RS24345 PF08402 TOBE domain NA29_RS24355 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS24360 PF01321 Creatinase/Prolidase N-terminal domain NA29_RS24360 PF00557 Metallopeptidase family M24 NA29_RS24365 PF01979 Amidohydrolase family NA29_RS24370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS24370 PF03466 LysR substrate binding domain NA29_RS24375 PF00586 AIR synthase related protein, N-terminal domain NA29_RS24375 PF02769 AIR synthase related protein, C-terminal domain NA29_RS24380 PF00308 Bacterial dnaA protein NA29_RS24380 PF11638 DnaA N-terminal domain NA29_RS24380 PF08299 Bacterial dnaA protein helix-turn-helix NA29_RS24390 PF12627 Probable RNA and SrmB- binding site of polymerase A NA29_RS24390 PF01743 Poly A polymerase head domain NA29_RS24390 PF12626 Polymerase A arginine-rich C-terminus NA29_RS24395 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NA29_RS24400 PF01712 Deoxynucleoside kinase NA29_RS24405 PF02548 Ketopantoate hydroxymethyltransferase NA29_RS24410 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS24410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS24410 PF08521 Two-component sensor kinase N-terminal NA29_RS24415 PF00486 Transcriptional regulatory protein, C terminal NA29_RS24415 PF00072 Response regulator receiver domain NA29_RS24420 PF00005 ABC transporter NA29_RS24425 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS24435 PF04715 Anthranilate synthase component I, N terminal region NA29_RS24435 PF00425 chorismate binding enzyme NA29_RS24440 PF00226 DnaJ domain NA29_RS24440 PF01556 DnaJ C terminal domain NA29_RS24440 PF00684 DnaJ central domain NA29_RS24445 PF00012 Hsp70 protein NA29_RS24455 PF01025 GrpE NA29_RS24465 PF01479 S4 domain NA29_RS24470 PF00762 Ferrochelatase NA29_RS24480 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NA29_RS24480 PF01628 HrcA protein C terminal domain NA29_RS24485 PF01513 ATP-NAD kinase NA29_RS24490 PF02463 RecF/RecN/SMC N terminal domain NA29_RS24495 PF03710 Glutamate-ammonia ligase adenylyltransferase NA29_RS24495 PF08335 GlnD PII-uridylyltransferase NA29_RS24505 PF00795 Carbon-nitrogen hydrolase NA29_RS24510 PF01523 Putative modulator of DNA gyrase NA29_RS24515 PF00793 DAHP synthetase I family NA29_RS24520 PF01923 Cobalamin adenosyltransferase NA29_RS24525 PF02913 FAD linked oxidases, C-terminal domain NA29_RS24525 PF01565 FAD binding domain NA29_RS24530 PF02913 FAD linked oxidases, C-terminal domain NA29_RS24530 PF01565 FAD binding domain NA29_RS24535 PF00027 Cyclic nucleotide-binding domain NA29_RS24535 PF00520 Ion transport protein NA29_RS24540 PF01565 FAD binding domain NA29_RS24545 PF00155 Aminotransferase class I and II NA29_RS24545 PF00392 Bacterial regulatory proteins, gntR family NA29_RS24555 PF00255 Glutathione peroxidase NA29_RS24560 PF01168 Alanine racemase, N-terminal domain NA29_RS24565 PF03807 NADP oxidoreductase coenzyme F420-dependent NA29_RS24565 PF14748 Pyrroline-5-carboxylate reductase dimerisation NA29_RS24570 PF01510 N-acetylmuramoyl-L-alanine amidase NA29_RS24575 PF01040 UbiA prenyltransferase family NA29_RS24585 PF03239 Iron permease FTR1 family NA29_RS24590 PF13473 Cupredoxin-like domain NA29_RS24595 PF10634 Fe2+ transport protein NA29_RS24600 PF13404 AsnC-type helix-turn-helix domain NA29_RS24600 PF01037 Lrp/AsnC ligand binding domain NA29_RS24605 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS24610 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS24615 PF00005 ABC transporter NA29_RS24620 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS24630 PF00034 Cytochrome c NA29_RS24635 PF00916 Sulfate permease family NA29_RS24635 PF01740 STAS domain NA29_RS24640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NA29_RS24640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NA29_RS24645 PF00561 alpha/beta hydrolase fold NA29_RS24655 PF01545 Cation efflux family NA29_RS24660 PF03466 LysR substrate binding domain NA29_RS24660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS24715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS24715 PF03466 LysR substrate binding domain NA29_RS24760 PF03781 Sulfatase-modifying factor enzyme 1 NA29_RS24760 PF12867 DinB superfamily NA29_RS24765 PF10017 Histidine-specific methyltransferase, SAM-dependent NA29_RS24790 PF08666 SAF domain NA29_RS24790 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NA29_RS24795 PF00701 Dihydrodipicolinate synthetase family NA29_RS24800 PF00171 Aldehyde dehydrogenase family NA29_RS24810 PF04542 Sigma-70 region 2 NA29_RS24810 PF08281 Sigma-70, region 4 NA29_RS24820 PF02203 Tar ligand binding domain homologue NA29_RS24820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS24820 PF00672 HAMP domain NA29_RS24825 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS24830 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS24830 PF14785 Maltose transport system permease protein MalF P2 domain NA29_RS24835 PF17912 MalK OB fold domain NA29_RS24835 PF00005 ABC transporter NA29_RS24835 PF03459 TOBE domain NA29_RS24845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NA29_RS24845 PF13378 Enolase C-terminal domain-like NA29_RS24850 PF13609 Gram-negative porin NA29_RS24855 PF00392 Bacterial regulatory proteins, gntR family NA29_RS24855 PF07702 UTRA domain NA29_RS24865 PF12833 Helix-turn-helix domain NA29_RS24890 PF00583 Acetyltransferase (GNAT) family NA29_RS24890 PF00814 Glycoprotease family NA29_RS24900 PF03466 LysR substrate binding domain NA29_RS24900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS24915 PF13417 Glutathione S-transferase, N-terminal domain NA29_RS24915 PF00043 Glutathione S-transferase, C-terminal domain NA29_RS24945 PF01066 CDP-alcohol phosphatidyltransferase NA29_RS24950 PF07885 Ion channel NA29_RS24950 PF02254 TrkA-N domain NA29_RS24955 PF08459 UvrC Helix-hairpin-helix N-terminal NA29_RS24955 PF02151 UvrB/uvrC motif NA29_RS24955 PF01541 GIY-YIG catalytic domain NA29_RS24965 PF01132 Elongation factor P (EF-P) OB domain NA29_RS24965 PF08207 Elongation factor P (EF-P) KOW-like domain NA29_RS24965 PF09285 Elongation factor P, C-terminal NA29_RS24970 PF00933 Glycosyl hydrolase family 3 N terminal domain NA29_RS24975 PF01648 4'-phosphopantetheinyl transferase superfamily NA29_RS24980 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NA29_RS24985 PF11967 Recombination protein O N terminal NA29_RS24985 PF02565 Recombination protein O C terminal NA29_RS24990 PF07650 KH domain NA29_RS24990 PF01926 50S ribosome-binding GTPase NA29_RS24995 PF14622 Ribonuclease-III-like NA29_RS24995 PF00035 Double-stranded RNA binding motif NA29_RS25000 PF10502 Signal peptidase, peptidase S26 NA29_RS25005 PF06421 GTP-binding protein LepA C-terminus NA29_RS25005 PF00679 Elongation factor G C-terminus NA29_RS25005 PF00009 Elongation factor Tu GTP binding domain NA29_RS25005 PF03144 Elongation factor Tu domain 2 NA29_RS25015 PF13180 PDZ domain NA29_RS25030 PF04542 Sigma-70 region 2 NA29_RS25030 PF08281 Sigma-70, region 4 NA29_RS25035 PF02801 Beta-ketoacyl synthase, C-terminal domain NA29_RS25035 PF00109 Beta-ketoacyl synthase, N-terminal domain NA29_RS25040 PF00550 Phosphopantetheine attachment site NA29_RS25050 PF00698 Acyl transferase domain NA29_RS25055 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NA29_RS25055 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NA29_RS25060 PF02504 Fatty acid synthesis protein NA29_RS25065 PF01783 Ribosomal L32p protein family NA29_RS25070 PF02620 Large ribosomal RNA subunit accumulation protein YceD NA29_RS25075 PF02545 Maf-like protein NA29_RS25080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NA29_RS25085 PF01343 Peptidase family S49 NA29_RS25085 PF06965 Na+/H+ antiporter 1 NA29_RS25095 PF13419 Haloacid dehalogenase-like hydrolase NA29_RS25100 PF01479 S4 domain NA29_RS25100 PF00849 RNA pseudouridylate synthase NA29_RS25105 PF00575 S1 RNA binding domain NA29_RS25105 PF10150 Ribonuclease E/G family NA29_RS25105 PF12111 Polyribonucleotide phosphorylase C terminal NA29_RS25110 PF06463 Molybdenum Cofactor Synthesis C NA29_RS25110 PF04055 Radical SAM superfamily NA29_RS25120 PF12804 MobA-like NTP transferase domain NA29_RS25125 PF03453 MoeA N-terminal region (domain I and II) NA29_RS25125 PF00994 Probable molybdopterin binding domain NA29_RS25125 PF03454 MoeA C-terminal region (domain IV) NA29_RS25135 PF00583 Acetyltransferase (GNAT) family NA29_RS25140 PF02646 RmuC family NA29_RS25145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS25145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NA29_RS25155 PF02589 LUD domain NA29_RS25160 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NA29_RS25160 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NA29_RS25165 PF11953 Domain of unknown function (DUF3470) NA29_RS25165 PF00037 4Fe-4S binding domain NA29_RS25180 PF07690 Major Facilitator Superfamily NA29_RS25185 PF00392 Bacterial regulatory proteins, gntR family NA29_RS25185 PF07729 FCD domain NA29_RS25190 PF02913 FAD linked oxidases, C-terminal domain NA29_RS25190 PF01565 FAD binding domain NA29_RS25195 PF01565 FAD binding domain NA29_RS25200 PF02754 Cysteine-rich domain NA29_RS25200 PF13183 4Fe-4S dicluster domain NA29_RS25210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS25275 PF07660 Secretin and TonB N terminus short domain NA29_RS25275 PF11741 AMIN domain NA29_RS25275 PF00263 Bacterial type II and III secretion system protein NA29_RS25275 PF03958 Bacterial type II/III secretion system short domain NA29_RS25320 PF01464 Transglycosylase SLT domain NA29_RS25395 PF05594 Haemagluttinin repeat NA29_RS25395 PF13332 Hemagglutinin repeat NA29_RS25395 PF05860 haemagglutination activity domain NA29_RS25395 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain NA29_RS25395 PF13018 Extended Signal Peptide of Type V secretion system NA29_RS25410 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NA29_RS25410 PF00703 Glycosyl hydrolases family 2 NA29_RS25410 PF16355 Domain of unknown function (DUF4982) NA29_RS25410 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NA29_RS25410 PF02837 Glycosyl hydrolases family 2, sugar binding domain NA29_RS25425 PF00999 Sodium/hydrogen exchanger family NA29_RS25470 PF01047 MarR family NA29_RS25475 PF00589 Phage integrase family NA29_RS25475 PF12167 Arm DNA-binding domain NA29_RS25490 PF01476 LysM domain NA29_RS25490 PF01551 Peptidase family M23 NA29_RS25520 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS25520 PF03707 Bacterial signalling protein N terminal repeat NA29_RS25520 PF00563 EAL domain NA29_RS25530 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NA29_RS25530 PF14489 QueF-like protein NA29_RS25595 PF13419 Haloacid dehalogenase-like hydrolase NA29_RS25635 PF02602 Uroporphyrinogen-III synthase HemD NA29_RS25640 PF01817 Chorismate mutase type II NA29_RS25680 PF03466 LysR substrate binding domain NA29_RS25680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family