NA29_RS00010 SM00895 NA29_RS00010 NA29_RS00045 SM01091 Transporter associated domain NA29_RS00050 SM00421 helix_turn_helix, Lux Regulon NA29_RS00065 SM00357 Cold shock protein domain NA29_RS00070 SM00257 Lysin motif NA29_RS00130 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS00130 SM00895 NA29_RS00130 NA29_RS00140 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS00140 SM00448 cheY-homologous receiver domain NA29_RS00145 SM00387 Histidine kinase-like ATPases NA29_RS00145 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS00145 SM00448 cheY-homologous receiver domain NA29_RS00205 SM00267 diguanylate cyclase NA29_RS00205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS00215 SM00052 Putative diguanylate phosphodiesterase NA29_RS00215 SM00091 PAS domain NA29_RS00215 SM00267 diguanylate cyclase NA29_RS00220 SM00829 Enoylreductase NA29_RS00280 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS00365 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS00390 SM00869 Autotransporter beta-domain NA29_RS00495 SM00650 Ribosomal RNA adenine dimethylases NA29_RS00500 SM00450 Rhodanese Homology Domain NA29_RS00560 SM00563 Phosphate acyltransferases NA29_RS00575 SM00732 Likely ribonuclease with RNase H fold. NA29_RS00615 SM00881 CoA binding domain NA29_RS00635 SM00382 ATPases associated with a variety of cellular activities NA29_RS00640 SM00448 cheY-homologous receiver domain NA29_RS00640 SM00862 Transcriptional regulatory protein, C terminal NA29_RS00645 SM00387 Histidine kinase-like ATPases NA29_RS00645 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS00690 SM00028 Tetratricopeptide repeats NA29_RS00700 SM00382 ATPases associated with a variety of cellular activities NA29_RS00720 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS00725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS00725 SM01049 NA29_RS00725 NA29_RS00760 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS00760 SM00382 ATPases associated with a variety of cellular activities NA29_RS00780 SM00267 diguanylate cyclase NA29_RS00800 SM00763 PrkA AAA domain NA29_RS00805 SM00382 ATPases associated with a variety of cellular activities NA29_RS00820 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS00840 SM01091 Transporter associated domain NA29_RS00855 SM00836 DALR anticodon binding domain NA29_RS00865 SM00563 Phosphate acyltransferases NA29_RS00890 SM00650 Ribosomal RNA adenine dimethylases NA29_RS00920 SM01011 Aminopeptidase P, N-terminal domain NA29_RS00940 SM00798 AICARFT/IMPCHase bienzyme NA29_RS00940 SM00851 MGS-like domain NA29_RS00955 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS00965 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS01015 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NA29_RS01020 SM00861 Transketolase, pyrimidine binding domain NA29_RS01055 SM00919 Malic enzyme, NAD binding domain NA29_RS01055 SM01274 NA29_RS01055 NA29_RS01075 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family NA29_RS01110 SM00955 NA29_RS01110 NA29_RS01145 SM00878 Biotin carboxylase C-terminal domain NA29_RS01200 SM00644 NA29_RS01200 NA29_RS01220 SM00382 ATPases associated with a variety of cellular activities NA29_RS01220 SM00962 SRP54-type protein, GTPase domain NA29_RS01220 SM00963 SRP54-type protein, helical bundle domain NA29_RS01250 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase NA29_RS01280 SM01091 Transporter associated domain NA29_RS01285 SM00382 ATPases associated with a variety of cellular activities NA29_RS01320 SM00382 ATPases associated with a variety of cellular activities NA29_RS01330 SM00957 SecA DEAD-like domain NA29_RS01330 SM00958 SecA preprotein cross-linking domain NA29_RS01345 SM00864 Tubulin/FtsZ family, GTPase domain NA29_RS01345 SM00865 Tubulin/FtsZ family, C-terminal domain NA29_RS01350 SM00842 Cell division protein FtsA NA29_RS01430 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS01440 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS01480 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS01480 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NA29_RS01515 SM00925 MltA specific insert domain NA29_RS01555 SM00382 ATPases associated with a variety of cellular activities NA29_RS01570 SM00387 Histidine kinase-like ATPases NA29_RS01570 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS01575 SM00448 cheY-homologous receiver domain NA29_RS01575 SM00862 Transcriptional regulatory protein, C terminal NA29_RS01605 SM01118 NA29_RS01605 NA29_RS01610 SM00986 Uracil DNA glycosylase superfamily NA29_RS01610 SM00987 UreE urease accessory protein, C-terminal domain NA29_RS01645 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NA29_RS01675 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS01675 SM00895 NA29_RS01675 NA29_RS01715 SM00937 NA29_RS01715 NA29_RS01755 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NA29_RS01755 SM00091 PAS domain NA29_RS01755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS01760 SM00138 Methyltransferase, chemotaxis proteins NA29_RS01770 SM00260 Two component signalling adaptor domain NA29_RS01785 SM00382 ATPases associated with a variety of cellular activities NA29_RS01815 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS01820 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS01930 SM00382 ATPases associated with a variety of cellular activities NA29_RS02025 SM00912 haemagglutination activity domain NA29_RS02040 SM00912 haemagglutination activity domain NA29_RS02065 SM00901 NA29_RS02065 NA29_RS02235 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS02325 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NA29_RS02425 SM00382 ATPases associated with a variety of cellular activities NA29_RS02455 SM00382 ATPases associated with a variety of cellular activities NA29_RS02485 SM00382 ATPases associated with a variety of cellular activities NA29_RS02525 SM01321 NA29_RS02525 NA29_RS02545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NA29_RS02580 SM01219 NA29_RS02580 NA29_RS02625 SM01004 Delta-aminolevulinic acid dehydratase NA29_RS02645 SM00662 RNA polymerases D NA29_RS02650 SM00363 S4 RNA-binding domain NA29_RS02650 SM01390 NA29_RS02650 NA29_RS02670 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS02720 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. NA29_RS02725 SM01374 NA29_RS02725 NA29_RS02745 SM00322 K homology RNA-binding domain NA29_RS02760 SM01382 NA29_RS02760 NA29_RS02760 SM01383 NA29_RS02760 NA29_RS02780 SM01403 NA29_RS02780 NA29_RS02790 SM00838 Elongation factor G C-terminus NA29_RS02790 SM00889 Elongation factor G, domain IV NA29_RS02805 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS02820 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS02850 SM00710 Parallel beta-helix repeats NA29_RS02850 SM00869 Autotransporter beta-domain NA29_RS02915 SM00663 RNA polymerase I subunit A N-terminus NA29_RS02940 SM00649 Ribosomal protein L11/L12 NA29_RS02945 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. NA29_RS02945 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. NA29_RS03010 SM00155 Phospholipase D. Active site motifs. NA29_RS03015 SM00965 Secretin and TonB N terminus short domain NA29_RS03035 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS03050 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS03095 SM00344 helix_turn_helix ASNC type NA29_RS03110 SM00919 Malic enzyme, NAD binding domain NA29_RS03110 SM01274 NA29_RS03110 NA29_RS03130 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS03155 SM00487 DEAD-like helicases superfamily NA29_RS03155 SM00490 helicase superfamily c-terminal domain NA29_RS03395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS03415 SM00749 bacterial OsmY and nodulation domain NA29_RS03435 SM00382 ATPases associated with a variety of cellular activities NA29_RS03455 SM00849 Metallo-beta-lactamase superfamily NA29_RS03485 SM00881 CoA binding domain NA29_RS03495 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS03505 SM00487 DEAD-like helicases superfamily NA29_RS03505 SM00490 helicase superfamily c-terminal domain NA29_RS03590 SM00869 Autotransporter beta-domain NA29_RS03605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS03605 SM00387 Histidine kinase-like ATPases NA29_RS03605 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS03610 SM00448 cheY-homologous receiver domain NA29_RS03610 SM00862 Transcriptional regulatory protein, C terminal NA29_RS03630 SM00382 ATPases associated with a variety of cellular activities NA29_RS03635 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS03640 SM00448 cheY-homologous receiver domain NA29_RS03640 SM00862 Transcriptional regulatory protein, C terminal NA29_RS03645 SM00387 Histidine kinase-like ATPases NA29_RS03645 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS03650 SM00387 Histidine kinase-like ATPases NA29_RS03655 SM00421 helix_turn_helix, Lux Regulon NA29_RS03655 SM00448 cheY-homologous receiver domain NA29_RS03715 SM00382 ATPases associated with a variety of cellular activities NA29_RS03775 SM00047 Lysozyme subfamily 2 NA29_RS03860 SM00382 ATPases associated with a variety of cellular activities NA29_RS03860 SM00962 SRP54-type protein, GTPase domain NA29_RS03880 SM00448 cheY-homologous receiver domain NA29_RS03885 SM00448 cheY-homologous receiver domain NA29_RS03895 SM00138 Methyltransferase, chemotaxis proteins NA29_RS03900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS03900 SM01049 NA29_RS03900 NA29_RS03905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS03905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS03910 SM00091 PAS domain NA29_RS03910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS03910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS03915 SM00260 Two component signalling adaptor domain NA29_RS03920 SM00073 Histidine Phosphotransfer domain NA29_RS03920 SM00260 Two component signalling adaptor domain NA29_RS03920 SM00387 Histidine kinase-like ATPases NA29_RS03920 SM01231 NA29_RS03920 NA29_RS03925 SM00448 cheY-homologous receiver domain NA29_RS03965 SM00382 ATPases associated with a variety of cellular activities NA29_RS04010 SM00470 ParB-like nuclease domain NA29_RS04030 SM01228 NA29_RS04030 NA29_RS04035 SM00382 ATPases associated with a variety of cellular activities NA29_RS04040 SM00382 ATPases associated with a variety of cellular activities NA29_RS04050 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS04080 SM00382 ATPases associated with a variety of cellular activities NA29_RS04085 SM00382 ATPases associated with a variety of cellular activities NA29_RS04140 SM00344 helix_turn_helix ASNC type NA29_RS04170 SM00382 ATPases associated with a variety of cellular activities NA29_RS04190 SM01359 NA29_RS04190 NA29_RS04190 SM01360 NA29_RS04190 NA29_RS04200 SM00344 helix_turn_helix ASNC type NA29_RS04215 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain NA29_RS04220 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS04245 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS04250 SM00450 Rhodanese Homology Domain NA29_RS04305 SM01234 NA29_RS04305 NA29_RS04325 SM00382 ATPases associated with a variety of cellular activities NA29_RS04325 SM00760 Bacterial dnaA protein helix-turn-helix domain NA29_RS04330 SM00480 DNA polymerase III beta subunit NA29_RS04335 SM00387 Histidine kinase-like ATPases NA29_RS04335 SM00433 TopoisomeraseII NA29_RS04380 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NA29_RS04385 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS04385 SM00871 Bacterial transcription activator, effector binding domain NA29_RS04390 SM00382 ATPases associated with a variety of cellular activities NA29_RS04415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS04415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS04490 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS04500 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS04515 SM00382 ATPases associated with a variety of cellular activities NA29_RS04525 SM00450 Rhodanese Homology Domain NA29_RS04570 SM00965 Secretin and TonB N terminus short domain NA29_RS04585 SM00382 ATPases associated with a variety of cellular activities NA29_RS04750 SM00052 Putative diguanylate phosphodiesterase NA29_RS04765 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS04790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS04790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS04795 SM00260 Two component signalling adaptor domain NA29_RS04800 SM00028 Tetratricopeptide repeats NA29_RS04800 SM00138 Methyltransferase, chemotaxis proteins NA29_RS04805 SM00260 Two component signalling adaptor domain NA29_RS04810 SM00073 Histidine Phosphotransfer domain NA29_RS04810 SM00260 Two component signalling adaptor domain NA29_RS04810 SM00387 Histidine kinase-like ATPases NA29_RS04810 SM00448 cheY-homologous receiver domain NA29_RS04815 SM00448 cheY-homologous receiver domain NA29_RS04820 SM00267 diguanylate cyclase NA29_RS04820 SM00448 cheY-homologous receiver domain NA29_RS04870 SM00382 ATPases associated with a variety of cellular activities NA29_RS04875 SM00382 ATPases associated with a variety of cellular activities NA29_RS04895 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS04895 SM00895 NA29_RS04895 NA29_RS04910 SM00028 Tetratricopeptide repeats NA29_RS04910 SM01043 Bacterial transcriptional activator domain NA29_RS04915 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS04925 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. NA29_RS04975 SM00421 helix_turn_helix, Lux Regulon NA29_RS04975 SM00448 cheY-homologous receiver domain NA29_RS04980 SM00387 Histidine kinase-like ATPases NA29_RS04980 SM01049 NA29_RS04980 NA29_RS04995 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS05005 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain NA29_RS05005 SM00437 Bacterial DNA topoisomerase I DNA-binding domain NA29_RS05005 SM00493 NA29_RS05005 NA29_RS05050 SM00091 PAS domain NA29_RS05050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS05050 SM00387 Histidine kinase-like ATPases NA29_RS05050 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS05055 SM00448 cheY-homologous receiver domain NA29_RS05085 SM00671 Sel1-like repeats. NA29_RS05125 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS05145 SM00382 ATPases associated with a variety of cellular activities NA29_RS05205 SM00862 Transcriptional regulatory protein, C terminal NA29_RS05290 SM00845 GatB domain NA29_RS05390 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase NA29_RS05405 SM00833 Cobalamin synthesis protein cobW C-terminal domain NA29_RS05430 SM00382 ATPases associated with a variety of cellular activities NA29_RS05430 SM01086 C-terminal, D2-small domain, of ClpB protein NA29_RS05435 SM00448 cheY-homologous receiver domain NA29_RS05440 SM00387 Histidine kinase-like ATPases NA29_RS05495 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS05495 SM00895 NA29_RS05495 NA29_RS05530 SM00382 ATPases associated with a variety of cellular activities NA29_RS05535 SM00382 ATPases associated with a variety of cellular activities NA29_RS05625 SM00996 S-adenosyl-L-homocysteine hydrolase NA29_RS05625 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NA29_RS05660 SM00382 ATPases associated with a variety of cellular activities NA29_RS05665 SM00382 ATPases associated with a variety of cellular activities NA29_RS05685 SM00988 UreE urease accessory protein, N-terminal domain NA29_RS05710 SM00382 ATPases associated with a variety of cellular activities NA29_RS05730 SM00382 ATPases associated with a variety of cellular activities NA29_RS05765 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS05775 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS05795 SM00797 Allophanate hydrolase subunit 2 NA29_RS05800 SM00796 Allophanate hydrolase subunit 1 NA29_RS05830 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS05850 SM00905 Dihydroneopterin aldolase NA29_RS05905 SM00382 ATPases associated with a variety of cellular activities NA29_RS05920 SM00448 cheY-homologous receiver domain NA29_RS05920 SM00862 Transcriptional regulatory protein, C terminal NA29_RS05925 SM00387 Histidine kinase-like ATPases NA29_RS05925 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS05935 SM01060 NA29_RS05935 NA29_RS06045 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS06080 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS06095 SM00833 Cobalamin synthesis protein cobW C-terminal domain NA29_RS06205 SM00849 Metallo-beta-lactamase superfamily NA29_RS06240 SM01322 NA29_RS06240 NA29_RS06255 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS06265 SM00267 diguanylate cyclase NA29_RS06290 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS06295 SM00878 Biotin carboxylase C-terminal domain NA29_RS06300 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS06300 SM00876 Biotin and Thiamin Synthesis associated domain NA29_RS06350 SM00947 Carbonic anhydrase NA29_RS06370 SM00422 helix_turn_helix, mercury resistance NA29_RS06375 SM00849 Metallo-beta-lactamase superfamily NA29_RS06405 SM00836 DALR anticodon binding domain NA29_RS06405 SM01016 Arginyl tRNA synthetase N terminal dom NA29_RS06425 SM01018 B12 binding domain NA29_RS06435 SM00450 Rhodanese Homology Domain NA29_RS06455 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS06485 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS06540 SM00382 ATPases associated with a variety of cellular activities NA29_RS06575 SM00936 Penicillin-binding protein 5, C-terminal domain NA29_RS06610 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS06620 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS06625 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS06635 SM00382 ATPases associated with a variety of cellular activities NA29_RS06645 SM00387 Histidine kinase-like ATPases NA29_RS06645 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS06650 SM00382 ATPases associated with a variety of cellular activities NA29_RS06650 SM00448 cheY-homologous receiver domain NA29_RS06655 SM00947 Carbonic anhydrase NA29_RS06675 SM00382 ATPases associated with a variety of cellular activities NA29_RS06690 SM00938 Nitrogen regulatory protein P-II NA29_RS06735 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NA29_RS06735 SM00245 tail specific protease NA29_RS06740 SM00855 Phosphoglycerate mutase family NA29_RS06745 SM00450 Rhodanese Homology Domain NA29_RS06765 SM00506 Appr-1"-p processing enzyme NA29_RS06795 SM00788 Adenylosuccinate synthetase NA29_RS06820 SM00903 Flavin reductase like domain NA29_RS06825 SM00421 helix_turn_helix, Lux Regulon NA29_RS06935 SM00382 ATPases associated with a variety of cellular activities NA29_RS06935 SM00962 SRP54-type protein, GTPase domain NA29_RS06935 SM00963 SRP54-type protein, helical bundle domain NA29_RS06955 SM00382 ATPases associated with a variety of cellular activities NA29_RS06970 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS06990 SM01400 NA29_RS06990 NA29_RS07010 SM00028 Tetratricopeptide repeats NA29_RS07015 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain NA29_RS07015 SM01232 NA29_RS07015 NA29_RS07020 SM00478 endonuclease III NA29_RS07055 SM00382 ATPases associated with a variety of cellular activities NA29_RS07075 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS07095 SM00420 helix_turn_helix, Deoxyribose operon repressor NA29_RS07095 SM01134 NA29_RS07095 NA29_RS07100 SM00382 ATPases associated with a variety of cellular activities NA29_RS07120 SM00382 ATPases associated with a variety of cellular activities NA29_RS07125 SM00382 ATPases associated with a variety of cellular activities NA29_RS07150 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS07150 SM00866 NA29_RS07150 NA29_RS07160 SM00072 Guanylate kinase homologues. NA29_RS07200 SM00869 Autotransporter beta-domain NA29_RS07215 SM00382 ATPases associated with a variety of cellular activities NA29_RS07225 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS07225 SM00895 NA29_RS07225 NA29_RS07290 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS07365 SM00387 Histidine kinase-like ATPases NA29_RS07365 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS07370 SM00448 cheY-homologous receiver domain NA29_RS07370 SM00862 Transcriptional regulatory protein, C terminal NA29_RS07385 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS07385 SM00895 NA29_RS07385 NA29_RS07395 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS07405 SM00382 ATPases associated with a variety of cellular activities NA29_RS07410 SM00354 helix_turn _helix lactose operon repressor NA29_RS07420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NA29_RS07430 SM00344 helix_turn_helix ASNC type NA29_RS07450 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS07450 SM00895 NA29_RS07450 NA29_RS07470 SM01150 NA29_RS07470 NA29_RS07515 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS07535 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS07550 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen NA29_RS07600 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NA29_RS07610 SM00422 helix_turn_helix, mercury resistance NA29_RS07645 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS07680 SM00912 haemagglutination activity domain NA29_RS07710 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS07730 SM00382 ATPases associated with a variety of cellular activities NA29_RS07760 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS07765 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS07805 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS07875 SM00849 Metallo-beta-lactamase superfamily NA29_RS07990 SM00344 helix_turn_helix ASNC type NA29_RS07995 SM00917 LeuA allosteric (dimerisation) domain NA29_RS08005 SM00882 Coenzyme A transferase NA29_RS08010 SM00882 Coenzyme A transferase NA29_RS08015 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS08030 SM00849 Metallo-beta-lactamase superfamily NA29_RS08035 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS08040 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS08055 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS08075 SM01217 NA29_RS08075 NA29_RS08085 SM01329 NA29_RS08085 NA29_RS08110 SM00052 Putative diguanylate phosphodiesterase NA29_RS08130 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS08135 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS08175 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS08200 SM00833 Cobalamin synthesis protein cobW C-terminal domain NA29_RS08230 SM00382 ATPases associated with a variety of cellular activities NA29_RS08235 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS08240 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS08295 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS08310 SM00448 cheY-homologous receiver domain NA29_RS08310 SM00862 Transcriptional regulatory protein, C terminal NA29_RS08315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS08315 SM00387 Histidine kinase-like ATPases NA29_RS08315 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS08320 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS08325 SM00903 Flavin reductase like domain NA29_RS08335 SM00382 ATPases associated with a variety of cellular activities NA29_RS08400 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. NA29_RS08440 SM00903 Flavin reductase like domain NA29_RS08445 SM00450 Rhodanese Homology Domain NA29_RS08450 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS08485 SM00893 Electron transfer flavoprotein domain NA29_RS08490 SM00893 Electron transfer flavoprotein domain NA29_RS08510 SM01230 NA29_RS08510 NA29_RS08560 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS08565 SM01119 NA29_RS08565 NA29_RS08620 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS08655 SM00978 NA29_RS08655 NA29_RS08680 SM00834 Putative regulatory protein NA29_RS08700 SM00155 Phospholipase D. Active site motifs. NA29_RS08735 SM00382 ATPases associated with a variety of cellular activities NA29_RS08745 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NA29_RS08750 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS08765 SM00382 ATPases associated with a variety of cellular activities NA29_RS08800 SM00859 Semialdehyde dehydrogenase, NAD binding domain NA29_RS08820 SM00363 S4 RNA-binding domain NA29_RS08835 SM00855 Phosphoglycerate mutase family NA29_RS08845 SM00382 ATPases associated with a variety of cellular activities NA29_RS08895 SM00981 NA29_RS08895 NA29_RS08920 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NA29_RS08920 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NA29_RS08940 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS09005 SM00421 helix_turn_helix, Lux Regulon NA29_RS09005 SM00448 cheY-homologous receiver domain NA29_RS09020 SM00382 ATPases associated with a variety of cellular activities NA29_RS09100 SM01323 NA29_RS09100 NA29_RS09115 SM00487 DEAD-like helicases superfamily NA29_RS09115 SM00490 helicase superfamily c-terminal domain NA29_RS09125 SM01060 NA29_RS09125 NA29_RS09240 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. NA29_RS09280 SM00095 Transthyretin NA29_RS09295 SM00382 ATPases associated with a variety of cellular activities NA29_RS09315 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS09315 SM00895 NA29_RS09315 NA29_RS09320 SM00903 Flavin reductase like domain NA29_RS09345 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS09375 SM00421 helix_turn_helix, Lux Regulon NA29_RS09375 SM00448 cheY-homologous receiver domain NA29_RS09390 SM00560 LamG-like jellyroll fold domain NA29_RS09420 SM00965 Secretin and TonB N terminus short domain NA29_RS09485 SM00382 ATPases associated with a variety of cellular activities NA29_RS09490 SM00382 ATPases associated with a variety of cellular activities NA29_RS09515 SM00465 GIY-YIG type nucleases (URI domain) NA29_RS09515 SM00479 NA29_RS09515 NA29_RS09530 SM00267 diguanylate cyclase NA29_RS09540 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS09540 SM00895 NA29_RS09540 NA29_RS09560 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS09610 SM00448 cheY-homologous receiver domain NA29_RS09610 SM00862 Transcriptional regulatory protein, C terminal NA29_RS09615 SM00387 Histidine kinase-like ATPases NA29_RS09615 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS09670 SM00344 helix_turn_helix ASNC type NA29_RS09690 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NA29_RS09695 SM00903 Flavin reductase like domain NA29_RS09720 SM00382 ATPases associated with a variety of cellular activities NA29_RS09740 SM00883 Chaperonin 10 Kd subunit NA29_RS09760 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS09845 SM01001 AIR carboxylase NA29_RS09870 SM00448 cheY-homologous receiver domain NA29_RS09870 SM00862 Transcriptional regulatory protein, C terminal NA29_RS09875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS09875 SM00387 Histidine kinase-like ATPases NA29_RS09875 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS09885 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NA29_RS09925 SM00382 ATPases associated with a variety of cellular activities NA29_RS10010 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS10030 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS10035 SM00903 Flavin reductase like domain NA29_RS10065 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS10065 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NA29_RS10075 SM00382 ATPases associated with a variety of cellular activities NA29_RS10180 SM00344 helix_turn_helix ASNC type NA29_RS10235 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS10245 SM00382 ATPases associated with a variety of cellular activities NA29_RS10260 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS10280 SM00450 Rhodanese Homology Domain NA29_RS10295 SM00869 Autotransporter beta-domain NA29_RS10300 SM00869 Autotransporter beta-domain NA29_RS10355 SM00421 helix_turn_helix, Lux Regulon NA29_RS10370 SM00382 ATPases associated with a variety of cellular activities NA29_RS10375 SM00382 ATPases associated with a variety of cellular activities NA29_RS10400 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS10415 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS10415 SM00895 NA29_RS10415 NA29_RS10435 SM01119 NA29_RS10435 NA29_RS10455 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS10535 SM00382 ATPases associated with a variety of cellular activities NA29_RS10565 SM00344 helix_turn_helix ASNC type NA29_RS10615 SM00267 diguanylate cyclase NA29_RS10620 SM00344 helix_turn_helix ASNC type NA29_RS10690 SM00460 Transglutaminase/protease-like homologues NA29_RS10720 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS10755 SM00829 Enoylreductase NA29_RS10770 SM00869 Autotransporter beta-domain NA29_RS10780 SM00869 Autotransporter beta-domain NA29_RS10845 SM00382 ATPases associated with a variety of cellular activities NA29_RS10850 SM00382 ATPases associated with a variety of cellular activities NA29_RS10905 SM00354 helix_turn _helix lactose operon repressor NA29_RS10925 SM00382 ATPases associated with a variety of cellular activities NA29_RS11035 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS11040 SM01092 CO dehydrogenase flavoprotein C-terminal domain NA29_RS11060 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS11060 SM00895 NA29_RS11060 NA29_RS11100 SM00422 helix_turn_helix, mercury resistance NA29_RS11145 SM00481 DNA polymerase alpha chain like domain NA29_RS11150 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS11165 SM00052 Putative diguanylate phosphodiesterase NA29_RS11165 SM00267 diguanylate cyclase NA29_RS11175 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS11195 SM00487 DEAD-like helicases superfamily NA29_RS11195 SM00490 helicase superfamily c-terminal domain NA29_RS11215 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS11285 SM00479 NA29_RS11285 NA29_RS11300 SM00849 Metallo-beta-lactamase superfamily NA29_RS11305 SM00257 Lysin motif NA29_RS11325 SM00382 ATPases associated with a variety of cellular activities NA29_RS11390 SM00912 haemagglutination activity domain NA29_RS11455 SM00822 NA29_RS11455 NA29_RS11465 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS11465 SM00895 NA29_RS11465 NA29_RS11470 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain NA29_RS11480 SM00851 MGS-like domain NA29_RS11480 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NA29_RS11495 SM01103 NA29_RS11495 NA29_RS11505 SM00382 ATPases associated with a variety of cellular activities NA29_RS11535 SM00382 ATPases associated with a variety of cellular activities NA29_RS11545 SM00448 cheY-homologous receiver domain NA29_RS11545 SM00862 Transcriptional regulatory protein, C terminal NA29_RS11550 SM00387 Histidine kinase-like ATPases NA29_RS11550 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS11570 SM00855 Phosphoglycerate mutase family NA29_RS11615 SM00382 ATPases associated with a variety of cellular activities NA29_RS11625 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS11630 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS11680 SM00072 Guanylate kinase homologues. NA29_RS11680 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain NA29_RS11720 SM00833 Cobalamin synthesis protein cobW C-terminal domain NA29_RS11735 SM00382 ATPases associated with a variety of cellular activities NA29_RS11740 SM00382 ATPases associated with a variety of cellular activities NA29_RS11785 SM00052 Putative diguanylate phosphodiesterase NA29_RS11790 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS11790 SM00895 NA29_RS11790 NA29_RS11800 SM00382 ATPases associated with a variety of cellular activities NA29_RS11850 SM01236 NA29_RS11850 NA29_RS11885 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS11885 SM00895 NA29_RS11885 NA29_RS11975 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS11975 SM00866 NA29_RS11975 NA29_RS11995 SM00382 ATPases associated with a variety of cellular activities NA29_RS12000 SM00382 ATPases associated with a variety of cellular activities NA29_RS12045 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NA29_RS12055 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS12125 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs NA29_RS12125 SM00474 3'-5' exonuclease NA29_RS12125 SM00475 5'-3' exonuclease NA29_RS12125 SM00482 DNA polymerase A domain NA29_RS12145 SM00450 Rhodanese Homology Domain NA29_RS12170 SM00861 Transketolase, pyrimidine binding domain NA29_RS12195 SM00400 zinc finger NA29_RS12195 SM00493 NA29_RS12195 NA29_RS12245 SM00849 Metallo-beta-lactamase superfamily NA29_RS12250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS12250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS12260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS12260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS12280 SM00052 Putative diguanylate phosphodiesterase NA29_RS12310 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS12355 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS12370 SM00091 PAS domain NA29_RS12370 SM00382 ATPases associated with a variety of cellular activities NA29_RS12425 SM00420 helix_turn_helix, Deoxyribose operon repressor NA29_RS12425 SM01134 NA29_RS12425 NA29_RS12465 SM00382 ATPases associated with a variety of cellular activities NA29_RS12520 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS12545 SM00450 Rhodanese Homology Domain NA29_RS12550 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS12550 SM00871 Bacterial transcription activator, effector binding domain NA29_RS12555 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS12585 SM01060 NA29_RS12585 NA29_RS12615 SM00965 Secretin and TonB N terminus short domain NA29_RS12680 SM00862 Transcriptional regulatory protein, C terminal NA29_RS12695 SM00382 ATPases associated with a variety of cellular activities NA29_RS12730 SM00387 Histidine kinase-like ATPases NA29_RS12730 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS12735 SM00421 helix_turn_helix, Lux Regulon NA29_RS12735 SM00448 cheY-homologous receiver domain NA29_RS12745 SM00267 diguanylate cyclase NA29_RS12760 SM00923 MbtH-like protein NA29_RS12765 SM00824 Thioesterase NA29_RS12780 SM00382 ATPases associated with a variety of cellular activities NA29_RS12790 SM00823 Phosphopantetheine attachment site NA29_RS12795 SM00823 Phosphopantetheine attachment site NA29_RS12800 SM00823 Phosphopantetheine attachment site NA29_RS12815 SM00382 ATPases associated with a variety of cellular activities NA29_RS12830 SM01006 Siderophore biosynthesis protein domain NA29_RS12855 SM00100 Cyclic nucleotide-monophosphate binding domain NA29_RS12865 SM00382 ATPases associated with a variety of cellular activities NA29_RS12885 SM00382 ATPases associated with a variety of cellular activities NA29_RS12905 SM00479 NA29_RS12905 NA29_RS12915 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS12940 SM00421 helix_turn_helix, Lux Regulon NA29_RS12940 SM00448 cheY-homologous receiver domain NA29_RS12945 SM00387 Histidine kinase-like ATPases NA29_RS12945 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS12945 SM00448 cheY-homologous receiver domain NA29_RS12970 SM00382 ATPases associated with a variety of cellular activities NA29_RS12995 SM00822 NA29_RS12995 NA29_RS13000 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS13025 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS13070 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS13095 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS13115 SM00072 Guanylate kinase homologues. NA29_RS13115 SM00382 ATPases associated with a variety of cellular activities NA29_RS13120 SM01409 NA29_RS13120 NA29_RS13125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NA29_RS13125 SM00954 Region found in RelA / SpoT proteins NA29_RS13160 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS13165 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS13185 SM00387 Histidine kinase-like ATPases NA29_RS13185 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS13190 SM00448 cheY-homologous receiver domain NA29_RS13190 SM00862 Transcriptional regulatory protein, C terminal NA29_RS13225 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NA29_RS13315 SM00257 Lysin motif NA29_RS13320 SM00917 LeuA allosteric (dimerisation) domain NA29_RS13355 SM01387 NA29_RS13355 NA29_RS13360 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS13360 SM00322 K homology RNA-binding domain NA29_RS13385 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NA29_RS13430 SM00422 helix_turn_helix, mercury resistance NA29_RS13475 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS13480 SM00563 Phosphate acyltransferases NA29_RS13500 SM00822 NA29_RS13500 NA29_RS13515 SM00421 helix_turn_helix, Lux Regulon NA29_RS13520 SM00882 Coenzyme A transferase NA29_RS13525 SM00882 Coenzyme A transferase NA29_RS13545 SM00954 Region found in RelA / SpoT proteins NA29_RS13555 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NA29_RS13580 SM00873 B3/4 domain NA29_RS13580 SM00874 tRNA synthetase B5 domain NA29_RS13580 SM00896 Ferredoxin-fold anticodon binding domain NA29_RS13585 SM00411 bacterial (prokaryotic) histone like domain NA29_RS13590 SM00422 helix_turn_helix, mercury resistance NA29_RS13595 SM00052 Putative diguanylate phosphodiesterase NA29_RS13595 SM00267 diguanylate cyclase NA29_RS13600 SM00267 diguanylate cyclase NA29_RS13635 SM00052 Putative diguanylate phosphodiesterase NA29_RS13635 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NA29_RS13635 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NA29_RS13635 SM00091 PAS domain NA29_RS13635 SM00267 diguanylate cyclase NA29_RS13650 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NA29_RS13650 SM00267 diguanylate cyclase NA29_RS13655 SM00903 Flavin reductase like domain NA29_RS13675 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS13680 SM00382 ATPases associated with a variety of cellular activities NA29_RS13715 SM01034 Sensors of blue-light using FAD NA29_RS13725 SM00267 diguanylate cyclase NA29_RS13755 SM00052 Putative diguanylate phosphodiesterase NA29_RS13755 SM00267 diguanylate cyclase NA29_RS13755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS13930 SM00028 Tetratricopeptide repeats NA29_RS13935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS13935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS13955 SM00861 Transketolase, pyrimidine binding domain NA29_RS14040 SM00858 NA29_RS14040 NA29_RS14070 SM00028 Tetratricopeptide repeats NA29_RS14085 SM00382 ATPases associated with a variety of cellular activities NA29_RS14100 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS14100 SM00732 Likely ribonuclease with RNase H fold. NA29_RS14115 SM00491 NA29_RS14115 NA29_RS14130 SM00363 S4 RNA-binding domain NA29_RS14155 SM00822 NA29_RS14155 NA29_RS14165 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS14205 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS14235 SM00487 DEAD-like helicases superfamily NA29_RS14235 SM00490 helicase superfamily c-terminal domain NA29_RS14235 SM00982 NA29_RS14235 NA29_RS14235 SM01058 CarD-like/TRCF domain NA29_RS14260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS14260 SM00387 Histidine kinase-like ATPases NA29_RS14260 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS14265 SM00448 cheY-homologous receiver domain NA29_RS14265 SM00862 Transcriptional regulatory protein, C terminal NA29_RS14385 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS14430 SM01209 NA29_RS14430 NA29_RS14435 SM01209 NA29_RS14435 NA29_RS14440 SM00382 ATPases associated with a variety of cellular activities NA29_RS14515 SM00822 NA29_RS14515 NA29_RS14540 SM00382 ATPases associated with a variety of cellular activities NA29_RS14540 SM00994 ClpX C4-type zinc finger NA29_RS14540 SM01086 C-terminal, D2-small domain, of ClpB protein NA29_RS14545 SM00382 ATPases associated with a variety of cellular activities NA29_RS14545 SM00464 Found in ATP-dependent protease La (LON) NA29_RS14550 SM00411 bacterial (prokaryotic) histone like domain NA29_RS14575 SM00382 ATPases associated with a variety of cellular activities NA29_RS14595 SM01211 NA29_RS14595 NA29_RS14645 SM00382 ATPases associated with a variety of cellular activities NA29_RS14650 SM00382 ATPases associated with a variety of cellular activities NA29_RS14670 SM00829 Enoylreductase NA29_RS14710 SM00248 ankyrin repeats NA29_RS14740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS14740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS14745 SM00387 Histidine kinase-like ATPases NA29_RS14745 SM00448 cheY-homologous receiver domain NA29_RS14760 SM00344 helix_turn_helix ASNC type NA29_RS14770 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS14770 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NA29_RS14780 SM00382 ATPases associated with a variety of cellular activities NA29_RS14795 SM00972 Spore Coat Protein U domain NA29_RS14810 SM00972 Spore Coat Protein U domain NA29_RS14825 SM00881 CoA binding domain NA29_RS14850 SM00421 helix_turn_helix, Lux Regulon NA29_RS14850 SM00448 cheY-homologous receiver domain NA29_RS14855 SM00387 Histidine kinase-like ATPases NA29_RS14855 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS14855 SM00448 cheY-homologous receiver domain NA29_RS14960 SM00028 Tetratricopeptide repeats NA29_RS15020 SM00822 NA29_RS15020 NA29_RS15050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NA29_RS15050 SM00267 diguanylate cyclase NA29_RS15090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS15090 SM00387 Histidine kinase-like ATPases NA29_RS15090 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS15095 SM00448 cheY-homologous receiver domain NA29_RS15095 SM00862 Transcriptional regulatory protein, C terminal NA29_RS15110 SM00382 ATPases associated with a variety of cellular activities NA29_RS15120 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. NA29_RS15125 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS15150 SM00849 Metallo-beta-lactamase superfamily NA29_RS15210 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS15230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS15230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS15235 SM01130 NA29_RS15235 NA29_RS15245 SM00382 ATPases associated with a variety of cellular activities NA29_RS15250 SM00382 ATPases associated with a variety of cellular activities NA29_RS15250 SM00448 cheY-homologous receiver domain NA29_RS15260 SM00155 Phospholipase D. Active site motifs. NA29_RS15280 SM00091 PAS domain NA29_RS15280 SM00267 diguanylate cyclase NA29_RS15285 SM00901 NA29_RS15285 NA29_RS15295 SM00422 helix_turn_helix, mercury resistance NA29_RS15305 SM00965 Secretin and TonB N terminus short domain NA29_RS15320 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS15360 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS15360 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS15405 SM00387 Histidine kinase-like ATPases NA29_RS15410 SM00421 helix_turn_helix, Lux Regulon NA29_RS15410 SM00448 cheY-homologous receiver domain NA29_RS15460 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS15460 SM00895 NA29_RS15460 NA29_RS15505 SM00382 ATPases associated with a variety of cellular activities NA29_RS15515 SM01130 NA29_RS15515 NA29_RS15560 SM00448 cheY-homologous receiver domain NA29_RS15560 SM00862 Transcriptional regulatory protein, C terminal NA29_RS15565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS15565 SM00387 Histidine kinase-like ATPases NA29_RS15565 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS15575 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS15600 SM00382 ATPases associated with a variety of cellular activities NA29_RS15645 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS15645 SM00866 NA29_RS15645 NA29_RS15670 SM00382 ATPases associated with a variety of cellular activities NA29_RS15700 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS15710 SM01119 NA29_RS15710 NA29_RS15755 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS15785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS15785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS15805 SM00422 helix_turn_helix, mercury resistance NA29_RS15850 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS15860 SM00422 helix_turn_helix, mercury resistance NA29_RS15880 SM00382 ATPases associated with a variety of cellular activities NA29_RS15960 SM00382 ATPases associated with a variety of cellular activities NA29_RS15970 SM00267 diguanylate cyclase NA29_RS16000 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS16000 SM00866 NA29_RS16000 NA29_RS16010 SM00382 ATPases associated with a variety of cellular activities NA29_RS16065 SM00822 NA29_RS16065 NA29_RS16075 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS16085 SM00870 NA29_RS16085 NA29_RS16110 SM00829 Enoylreductase NA29_RS16115 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS16155 SM00849 Metallo-beta-lactamase superfamily NA29_RS16155 SM01027 Beta-Casp domain NA29_RS16170 SM00421 helix_turn_helix, Lux Regulon NA29_RS16170 SM00448 cheY-homologous receiver domain NA29_RS16175 SM00100 Cyclic nucleotide-monophosphate binding domain NA29_RS16175 SM00419 helix_turn_helix, cAMP Regulatory protein NA29_RS16180 SM00829 Enoylreductase NA29_RS16185 SM00091 PAS domain NA29_RS16185 SM00387 Histidine kinase-like ATPases NA29_RS16195 SM00829 Enoylreductase NA29_RS16200 SM01400 NA29_RS16200 NA29_RS16205 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain NA29_RS16230 SM00749 bacterial OsmY and nodulation domain NA29_RS16295 SM01160 NA29_RS16295 NA29_RS16320 SM00749 bacterial OsmY and nodulation domain NA29_RS16350 SM00869 Autotransporter beta-domain NA29_RS16385 SM00947 Carbonic anhydrase NA29_RS16445 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS16450 SM00226 Low molecular weight phosphatase family NA29_RS16480 SM00421 helix_turn_helix, Lux Regulon NA29_RS16505 SM00267 diguanylate cyclase NA29_RS16565 SM00448 cheY-homologous receiver domain NA29_RS16565 SM00862 Transcriptional regulatory protein, C terminal NA29_RS16570 SM00387 Histidine kinase-like ATPases NA29_RS16570 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS16605 SM00448 cheY-homologous receiver domain NA29_RS16605 SM00862 Transcriptional regulatory protein, C terminal NA29_RS16610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS16610 SM00387 Histidine kinase-like ATPases NA29_RS16610 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS16640 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS16675 SM00749 bacterial OsmY and nodulation domain NA29_RS16685 SM00267 diguanylate cyclase NA29_RS16700 SM00052 Putative diguanylate phosphodiesterase NA29_RS16700 SM00267 diguanylate cyclase NA29_RS16745 SM00829 Enoylreductase NA29_RS16760 SM00382 ATPases associated with a variety of cellular activities NA29_RS16765 SM00382 ATPases associated with a variety of cellular activities NA29_RS16780 SM00382 ATPases associated with a variety of cellular activities NA29_RS16780 SM00843 NA29_RS16780 NA29_RS16790 SM00052 Putative diguanylate phosphodiesterase NA29_RS16790 SM00267 diguanylate cyclase NA29_RS16800 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS16810 SM00869 Autotransporter beta-domain NA29_RS16815 SM00267 diguanylate cyclase NA29_RS16820 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS16835 SM00382 ATPases associated with a variety of cellular activities NA29_RS16905 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS16905 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NA29_RS16910 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NA29_RS16965 SM00822 NA29_RS16965 NA29_RS16995 SM00411 bacterial (prokaryotic) histone like domain NA29_RS17000 SM00880 NA29_RS17000 NA29_RS17010 SM00422 helix_turn_helix, mercury resistance NA29_RS17025 SM00267 diguanylate cyclase NA29_RS17050 SM00382 ATPases associated with a variety of cellular activities NA29_RS17070 SM00382 ATPases associated with a variety of cellular activities NA29_RS17110 SM00460 Transglutaminase/protease-like homologues NA29_RS17155 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS17155 SM00895 NA29_RS17155 NA29_RS17175 SM00382 ATPases associated with a variety of cellular activities NA29_RS17180 SM00382 ATPases associated with a variety of cellular activities NA29_RS17190 SM00464 Found in ATP-dependent protease La (LON) NA29_RS17260 SM00869 Autotransporter beta-domain NA29_RS17265 SM00421 helix_turn_helix, Lux Regulon NA29_RS17265 SM00448 cheY-homologous receiver domain NA29_RS17270 SM00387 Histidine kinase-like ATPases NA29_RS17285 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS17285 SM01240 NA29_RS17285 NA29_RS17310 SM00244 prohibitin homologues NA29_RS17360 SM00935 Outer membrane protein (OmpH-like) NA29_RS17370 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NA29_RS17420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NA29_RS17425 SM00363 S4 RNA-binding domain NA29_RS17435 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NA29_RS17435 SM00292 breast cancer carboxy-terminal domain NA29_RS17435 SM00532 Ligase N family NA29_RS17440 SM00771 ZipA, C-terminal domain (FtsZ-binding) NA29_RS17445 SM00968 SMC proteins Flexible Hinge Domain NA29_RS17480 SM00155 Phospholipase D. Active site motifs. NA29_RS17485 SM00382 ATPases associated with a variety of cellular activities NA29_RS17495 SM00382 ATPases associated with a variety of cellular activities NA29_RS17500 SM01005 Alanine racemase, C-terminal domain NA29_RS17520 SM00986 Uracil DNA glycosylase superfamily NA29_RS17520 SM00987 UreE urease accessory protein, C-terminal domain NA29_RS17535 SM00487 DEAD-like helicases superfamily NA29_RS17535 SM00490 helicase superfamily c-terminal domain NA29_RS17585 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS17590 SM00448 cheY-homologous receiver domain NA29_RS17590 SM00850 LytTr DNA-binding domain NA29_RS17595 SM00387 Histidine kinase-like ATPases NA29_RS17605 SM00382 ATPases associated with a variety of cellular activities NA29_RS17605 SM01086 C-terminal, D2-small domain, of ClpB protein NA29_RS17625 SM00852 Probable molybdopterin binding domain NA29_RS17685 SM00670 Large family of predicted nucleotide-binding domains NA29_RS17710 SM00382 ATPases associated with a variety of cellular activities NA29_RS17755 SM00870 NA29_RS17755 NA29_RS17765 SM00382 ATPases associated with a variety of cellular activities NA29_RS17835 SM00838 Elongation factor G C-terminus NA29_RS17840 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS17880 SM00357 Cold shock protein domain NA29_RS17900 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS17900 SM00322 K homology RNA-binding domain NA29_RS17910 SM00363 S4 RNA-binding domain NA29_RS17920 SM00100 Cyclic nucleotide-monophosphate binding domain NA29_RS17920 SM00419 helix_turn_helix, cAMP Regulatory protein NA29_RS17935 SM00829 Enoylreductase NA29_RS17940 SM00852 Probable molybdopterin binding domain NA29_RS17955 SM00382 ATPases associated with a variety of cellular activities NA29_RS17955 SM00487 DEAD-like helicases superfamily NA29_RS17955 SM00490 helicase superfamily c-terminal domain NA29_RS17955 SM00847 Helicase associated domain (HA2) Add an annotation NA29_RS17995 SM00967 RNA 2'-O ribose methyltransferase substrate binding NA29_RS18000 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS18000 SM00357 Cold shock protein domain NA29_RS18000 SM00955 NA29_RS18000 NA29_RS18035 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS18050 SM00382 ATPases associated with a variety of cellular activities NA29_RS18080 SM00822 NA29_RS18080 NA29_RS18095 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS18095 SM00895 NA29_RS18095 NA29_RS18140 SM00382 ATPases associated with a variety of cellular activities NA29_RS18140 SM00448 cheY-homologous receiver domain NA29_RS18145 SM00387 Histidine kinase-like ATPases NA29_RS18145 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS18150 SM01230 NA29_RS18150 NA29_RS18155 SM00450 Rhodanese Homology Domain NA29_RS18215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS18215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS18220 SM00838 Elongation factor G C-terminus NA29_RS18220 SM00889 Elongation factor G, domain IV NA29_RS18240 SM00636 NA29_RS18240 NA29_RS18265 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS18265 SM00895 NA29_RS18265 NA29_RS18275 SM00267 diguanylate cyclase NA29_RS18280 SM00357 Cold shock protein domain NA29_RS18295 SM00822 NA29_RS18295 NA29_RS18310 SM00849 Metallo-beta-lactamase superfamily NA29_RS18350 SM00357 Cold shock protein domain NA29_RS18405 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS18405 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NA29_RS18430 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS18480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NA29_RS18480 SM00091 PAS domain NA29_RS18480 SM00387 Histidine kinase-like ATPases NA29_RS18480 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS18485 SM00421 helix_turn_helix, Lux Regulon NA29_RS18485 SM00448 cheY-homologous receiver domain NA29_RS18510 SM00788 Adenylosuccinate synthetase NA29_RS18525 SM00244 prohibitin homologues NA29_RS18530 SM00244 prohibitin homologues NA29_RS18550 SM00564 beta-propeller repeat NA29_RS18570 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS18580 SM00562 NA29_RS18580 NA29_RS18605 SM00257 Lysin motif NA29_RS18625 SM00382 ATPases associated with a variety of cellular activities NA29_RS18640 SM00421 helix_turn_helix, Lux Regulon NA29_RS18685 SM00382 ATPases associated with a variety of cellular activities NA29_RS18690 SM00493 NA29_RS18690 NA29_RS18700 SM00382 ATPases associated with a variety of cellular activities NA29_RS18710 SM00357 Cold shock protein domain NA29_RS18710 SM00382 ATPases associated with a variety of cellular activities NA29_RS18710 SM00959 Rho termination factor, N-terminal domain NA29_RS18715 SM00028 Tetratricopeptide repeats NA29_RS18735 SM00382 ATPases associated with a variety of cellular activities NA29_RS18780 SM00977 TilS substrate C-terminal domain NA29_RS18790 SM00478 endonuclease III NA29_RS18795 SM00840 NA29_RS18795 NA29_RS18800 SM00028 Tetratricopeptide repeats NA29_RS18845 SM00382 ATPases associated with a variety of cellular activities NA29_RS18865 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS18950 SM00859 Semialdehyde dehydrogenase, NAD binding domain NA29_RS18955 SM01329 NA29_RS18955 NA29_RS19005 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS19005 SM00866 NA29_RS19005 NA29_RS19025 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS19025 SM00478 endonuclease III NA29_RS19025 SM01009 AlkA N-terminal domain NA29_RS19055 SM00631 NA29_RS19055 NA29_RS19090 SM00855 Phosphoglycerate mutase family NA29_RS19195 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NA29_RS19200 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NA29_RS19245 SM00829 Enoylreductase NA29_RS19250 SM00421 helix_turn_helix, Lux Regulon NA29_RS19255 SM00267 diguanylate cyclase NA29_RS19255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS19265 SM00533 DNA-binding domain of DNA mismatch repair MUTS family NA29_RS19265 SM00534 ATPase domain of DNA mismatch repair MUTS family NA29_RS19280 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. NA29_RS19285 SM00849 Metallo-beta-lactamase superfamily NA29_RS19295 SM01130 NA29_RS19295 NA29_RS19320 SM00481 DNA polymerase alpha chain like domain NA29_RS19355 SM01192 NA29_RS19355 NA29_RS19355 SM01193 NA29_RS19355 NA29_RS19375 SM00849 Metallo-beta-lactamase superfamily NA29_RS19385 SM00382 ATPases associated with a variety of cellular activities NA29_RS19435 SM00937 NA29_RS19435 NA29_RS19485 SM00271 DnaJ molecular chaperone homology domain NA29_RS19515 SM00226 Low molecular weight phosphatase family NA29_RS19520 SM00487 DEAD-like helicases superfamily NA29_RS19520 SM00490 helicase superfamily c-terminal domain NA29_RS19545 SM00478 endonuclease III NA29_RS19575 SM00382 ATPases associated with a variety of cellular activities NA29_RS19600 SM00986 Uracil DNA glycosylase superfamily NA29_RS19600 SM00987 UreE urease accessory protein, C-terminal domain NA29_RS19610 SM00387 Histidine kinase-like ATPases NA29_RS19615 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS19660 SM00434 DNA Topoisomerase IV NA29_RS19675 SM00387 Histidine kinase-like ATPases NA29_RS19675 SM00433 TopoisomeraseII NA29_RS19680 SM00382 ATPases associated with a variety of cellular activities NA29_RS19770 SM00382 ATPases associated with a variety of cellular activities NA29_RS19785 SM00267 diguanylate cyclase NA29_RS19790 SM00382 ATPases associated with a variety of cellular activities NA29_RS19795 SM00382 ATPases associated with a variety of cellular activities NA29_RS19825 SM00852 Probable molybdopterin binding domain NA29_RS19830 SM00479 NA29_RS19830 NA29_RS19895 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS19900 SM00344 helix_turn_helix ASNC type NA29_RS19910 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NA29_RS19910 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NA29_RS19975 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS20025 SM00477 DNA/RNA non-specific endonuclease NA29_RS20025 SM00892 DNA/RNA non-specific endonuclease NA29_RS20070 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS20140 SM00829 Enoylreductase NA29_RS20190 SM00148 Phospholipase C, catalytic domain (part); domain X NA29_RS20195 SM00354 helix_turn _helix lactose operon repressor NA29_RS20225 SM00903 Flavin reductase like domain NA29_RS20250 SM00344 helix_turn_helix ASNC type NA29_RS20255 SM00420 helix_turn_helix, Deoxyribose operon repressor NA29_RS20255 SM01134 NA29_RS20255 NA29_RS20270 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS20290 SM00831 Cation transporter/ATPase, N-terminus NA29_RS20310 SM00965 Secretin and TonB N terminus short domain NA29_RS20345 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS20350 SM00382 ATPases associated with a variety of cellular activities NA29_RS20355 SM00382 ATPases associated with a variety of cellular activities NA29_RS20370 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS20385 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS20385 SM00895 NA29_RS20385 NA29_RS20400 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS20445 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS20495 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS20515 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS20515 SM00895 NA29_RS20515 NA29_RS20520 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS20520 SM00895 NA29_RS20520 NA29_RS20550 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NA29_RS20550 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NA29_RS20580 SM00091 PAS domain NA29_RS20605 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS20605 SM00895 NA29_RS20605 NA29_RS20615 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NA29_RS20620 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS20620 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NA29_RS20710 SM00382 ATPases associated with a variety of cellular activities NA29_RS20750 SM00382 ATPases associated with a variety of cellular activities NA29_RS20790 SM00822 NA29_RS20790 NA29_RS20795 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS20810 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS20825 SM00893 Electron transfer flavoprotein domain NA29_RS20830 SM00893 Electron transfer flavoprotein domain NA29_RS20850 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS20850 SM00895 NA29_RS20850 NA29_RS20885 SM00972 Spore Coat Protein U domain NA29_RS20900 SM00972 Spore Coat Protein U domain NA29_RS20915 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS20925 SM00859 Semialdehyde dehydrogenase, NAD binding domain NA29_RS20945 SM00411 bacterial (prokaryotic) histone like domain NA29_RS20950 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS21005 SM00861 Transketolase, pyrimidine binding domain NA29_RS21025 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS21110 SM00421 helix_turn_helix, Lux Regulon NA29_RS21110 SM00448 cheY-homologous receiver domain NA29_RS21115 SM00387 Histidine kinase-like ATPases NA29_RS21120 SM00382 ATPases associated with a variety of cellular activities NA29_RS21150 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS21160 SM00382 ATPases associated with a variety of cellular activities NA29_RS21195 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS21200 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS21220 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS21245 SM00420 helix_turn_helix, Deoxyribose operon repressor NA29_RS21245 SM01134 NA29_RS21245 NA29_RS21255 SM00859 Semialdehyde dehydrogenase, NAD binding domain NA29_RS21310 SM00822 NA29_RS21310 NA29_RS21315 SM00448 cheY-homologous receiver domain NA29_RS21315 SM00862 Transcriptional regulatory protein, C terminal NA29_RS21345 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NA29_RS21365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS21365 SM00387 Histidine kinase-like ATPases NA29_RS21365 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS21385 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS21400 SM00382 ATPases associated with a variety of cellular activities NA29_RS21405 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS21415 SM00382 ATPases associated with a variety of cellular activities NA29_RS21460 SM00833 Cobalamin synthesis protein cobW C-terminal domain NA29_RS21465 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS21465 SM00895 NA29_RS21465 NA29_RS21525 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS21550 SM00382 ATPases associated with a variety of cellular activities NA29_RS21560 SM00843 NA29_RS21560 NA29_RS21570 SM00463 Small MutS-related domain NA29_RS21580 SM00938 Nitrogen regulatory protein P-II NA29_RS21615 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS21620 SM01130 NA29_RS21620 NA29_RS21630 SM00382 ATPases associated with a variety of cellular activities NA29_RS21725 SM00344 helix_turn_helix ASNC type NA29_RS21825 SM00382 ATPases associated with a variety of cellular activities NA29_RS21855 SM00893 Electron transfer flavoprotein domain NA29_RS21860 SM00893 Electron transfer flavoprotein domain NA29_RS21910 SM00984 UDP binding domain NA29_RS21915 SM00028 Tetratricopeptide repeats NA29_RS21925 SM00411 bacterial (prokaryotic) histone like domain NA29_RS21930 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS21955 SM00830 Chorismate mutase type II NA29_RS21970 SM00434 DNA Topoisomerase IV NA29_RS22025 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS22025 SM00895 NA29_RS22025 NA29_RS22245 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS22280 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS22340 SM00822 NA29_RS22340 NA29_RS22345 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS22360 SM00822 NA29_RS22360 NA29_RS22370 SM00382 ATPases associated with a variety of cellular activities NA29_RS22385 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS22395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS22430 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS22460 SM01130 NA29_RS22460 NA29_RS22475 SM00831 Cation transporter/ATPase, N-terminus NA29_RS22485 SM00014 Acid phosphatase homologues NA29_RS22555 SM00382 ATPases associated with a variety of cellular activities NA29_RS22560 SM00382 ATPases associated with a variety of cellular activities NA29_RS22570 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS22615 SM00052 Putative diguanylate phosphodiesterase NA29_RS22615 SM00267 diguanylate cyclase NA29_RS22630 SM00382 ATPases associated with a variety of cellular activities NA29_RS22630 SM00930 NA29_RS22630 NA29_RS22635 SM00448 cheY-homologous receiver domain NA29_RS22640 SM00421 helix_turn_helix, Lux Regulon NA29_RS22640 SM00448 cheY-homologous receiver domain NA29_RS22660 SM00387 Histidine kinase-like ATPases NA29_RS22685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS22720 SM00448 cheY-homologous receiver domain NA29_RS22720 SM00862 Transcriptional regulatory protein, C terminal NA29_RS22725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS22725 SM00387 Histidine kinase-like ATPases NA29_RS22725 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS22735 SM00382 ATPases associated with a variety of cellular activities NA29_RS22765 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS22800 SM00382 ATPases associated with a variety of cellular activities NA29_RS22835 SM00487 DEAD-like helicases superfamily NA29_RS22835 SM00490 helicase superfamily c-terminal domain NA29_RS22855 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS22875 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS22880 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS22905 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS22920 SM00998 Adenylosuccinate lyase C-terminus NA29_RS22975 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS22980 SM00448 cheY-homologous receiver domain NA29_RS23000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS23000 SM00387 Histidine kinase-like ATPases NA29_RS23040 SM00382 ATPases associated with a variety of cellular activities NA29_RS23045 SM00382 ATPases associated with a variety of cellular activities NA29_RS23085 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS23105 SM00382 ATPases associated with a variety of cellular activities NA29_RS23185 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS23190 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS23200 SM00429 ig-like, plexins, transcription factors NA29_RS23200 SM00869 Autotransporter beta-domain NA29_RS23250 SM01012 NA29_RS23250 NA29_RS23260 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS23280 SM00903 Flavin reductase like domain NA29_RS23315 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS23345 SM00421 helix_turn_helix, Lux Regulon NA29_RS23390 SM00248 ankyrin repeats NA29_RS23425 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS23465 SM00822 NA29_RS23465 NA29_RS23475 SM00382 ATPases associated with a variety of cellular activities NA29_RS23495 SM00829 Enoylreductase NA29_RS23500 SM00851 MGS-like domain NA29_RS23530 SM01209 NA29_RS23530 NA29_RS23530 SM01210 NA29_RS23530 NA29_RS23575 SM00382 ATPases associated with a variety of cellular activities NA29_RS23590 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS23625 SM00382 ATPases associated with a variety of cellular activities NA29_RS23630 SM00341 Helicase and RNase D C-terminal NA29_RS23630 SM00487 DEAD-like helicases superfamily NA29_RS23630 SM00490 helicase superfamily c-terminal domain NA29_RS23630 SM00956 NA29_RS23630 NA29_RS23645 SM00481 DNA polymerase alpha chain like domain NA29_RS23650 SM00450 Rhodanese Homology Domain NA29_RS23660 SM00487 DEAD-like helicases superfamily NA29_RS23660 SM00490 helicase superfamily c-terminal domain NA29_RS23705 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS23705 SM01091 Transporter associated domain NA29_RS23710 SM00382 ATPases associated with a variety of cellular activities NA29_RS23730 SM00421 helix_turn_helix, Lux Regulon NA29_RS23730 SM00448 cheY-homologous receiver domain NA29_RS23755 SM00448 cheY-homologous receiver domain NA29_RS23755 SM00862 Transcriptional regulatory protein, C terminal NA29_RS23760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS23760 SM00387 Histidine kinase-like ATPases NA29_RS23760 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS23765 SM00528 Domain in histone-like proteins of HNS family NA29_RS23790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS23795 SM00849 Metallo-beta-lactamase superfamily NA29_RS23815 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS23830 SM00919 Malic enzyme, NAD binding domain NA29_RS23830 SM01274 NA29_RS23830 NA29_RS23845 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS23855 SM00052 Putative diguanylate phosphodiesterase NA29_RS23855 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NA29_RS23855 SM00091 PAS domain NA29_RS23855 SM00267 diguanylate cyclase NA29_RS23890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS23890 SM00387 Histidine kinase-like ATPases NA29_RS23890 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS23895 SM00448 cheY-homologous receiver domain NA29_RS23895 SM00862 Transcriptional regulatory protein, C terminal NA29_RS23910 SM00382 ATPases associated with a variety of cellular activities NA29_RS23945 SM00382 ATPases associated with a variety of cellular activities NA29_RS23950 SM00382 ATPases associated with a variety of cellular activities NA29_RS24030 SM00904 Riboflavin kinase NA29_RS24065 SM00382 ATPases associated with a variety of cellular activities NA29_RS24065 SM01086 C-terminal, D2-small domain, of ClpB protein NA29_RS24075 SM00357 Cold shock protein domain NA29_RS24110 SM00822 NA29_RS24110 NA29_RS24140 SM01329 NA29_RS24140 NA29_RS24165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NA29_RS24210 SM00822 NA29_RS24210 NA29_RS24265 SM01207 NA29_RS24265 NA29_RS24270 SM00421 helix_turn_helix, Lux Regulon NA29_RS24320 SM00646 NA29_RS24320 NA29_RS24330 SM00853 MutL C terminal dimerisation domain NA29_RS24330 SM01340 NA29_RS24330 NA29_RS24345 SM00382 ATPases associated with a variety of cellular activities NA29_RS24410 SM00387 Histidine kinase-like ATPases NA29_RS24410 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS24415 SM00448 cheY-homologous receiver domain NA29_RS24415 SM00862 Transcriptional regulatory protein, C terminal NA29_RS24420 SM00382 ATPases associated with a variety of cellular activities NA29_RS24440 SM00271 DnaJ molecular chaperone homology domain NA29_RS24465 SM00363 S4 RNA-binding domain NA29_RS24545 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS24570 SM00644 NA29_RS24570 NA29_RS24600 SM00344 helix_turn_helix ASNC type NA29_RS24615 SM00382 ATPases associated with a variety of cellular activities NA29_RS24620 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS24620 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NA29_RS24665 SM00822 NA29_RS24665 NA29_RS24790 SM00858 NA29_RS24790 NA29_RS24795 SM01130 NA29_RS24795 NA29_RS24820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS24835 SM00382 ATPases associated with a variety of cellular activities NA29_RS24845 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NA29_RS24855 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS24855 SM00895 NA29_RS24855 NA29_RS24865 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS24880 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS24895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NA29_RS24925 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS24955 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NA29_RS24955 SM00465 GIY-YIG type nucleases (URI domain) NA29_RS24965 SM00841 Elongation factor P, C-terminal NA29_RS24965 SM01185 NA29_RS24965 NA29_RS24995 SM00358 Double-stranded RNA binding motif NA29_RS24995 SM00535 Ribonuclease III family NA29_RS25005 SM00838 Elongation factor G C-terminus NA29_RS25015 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NA29_RS25035 SM00825 Beta-ketoacyl synthase NA29_RS25040 SM00823 Phosphopantetheine attachment site NA29_RS25045 SM00822 NA29_RS25045 NA29_RS25050 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. NA29_RS25100 SM00363 S4 RNA-binding domain NA29_RS25105 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS25110 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS25125 SM00852 Probable molybdopterin binding domain NA29_RS25185 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS25185 SM00895 NA29_RS25185 NA29_RS25280 SM00858 NA29_RS25280 NA29_RS25285 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS25330 SM00912 haemagglutination activity domain NA29_RS25350 SM00862 Transcriptional regulatory protein, C terminal NA29_RS25365 SM00054 EF-hand, calcium binding motif NA29_RS25410 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain NA29_RS25410 SM00409 Immunoglobulin NA29_RS25440 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS25470 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS25520 SM00052 Putative diguanylate phosphodiesterase NA29_RS25545 SM00862 Transcriptional regulatory protein, C terminal NA29_RS25570 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS25590 SM00014 Acid phosphatase homologues NA29_RS25605 SM00912 haemagglutination activity domain NA29_RS25615 SM00869 Autotransporter beta-domain NA29_RS25640 SM00830 Chorismate mutase type II