locus-tag class description NA29_RS00005 PF11638 DnaA N-terminal domain NA29_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix NA29_RS00005 PF00308 Bacterial dnaA protein NA29_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NA29_RS00010 PF02767 DNA polymerase III beta subunit, central domain NA29_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NA29_RS00015 PF00204 DNA gyrase B NA29_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS00015 PF01751 Toprim domain NA29_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus NA29_RS00015 PF18053 DNA gyrase B subunit insert domain NA29_RS00025 PF06508 Queuosine biosynthesis protein QueC NA29_RS00050 PF03600 Citrate transporter NA29_RS00060 PF03069 Acetamidase/Formamidase family NA29_RS00065 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NA29_RS00065 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NA29_RS00080 PF00158 Sigma-54 interaction domain NA29_RS00080 PF02954 Bacterial regulatory protein, Fis family NA29_RS00080 PF06506 Propionate catabolism activator NA29_RS00090 PF00083 Sugar (and other) transporter NA29_RS00105 PF02203 Tar ligand binding domain homologue NA29_RS00105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS00105 PF00672 HAMP domain NA29_RS00135 PF00005 ABC transporter NA29_RS00135 PF08402 TOBE domain NA29_RS00140 PF02583 Metal-sensitive transcriptional repressor NA29_RS00145 PF03824 High-affinity nickel-transport protein NA29_RS00155 PF03466 LysR substrate binding domain NA29_RS00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00160 PF04072 Leucine carboxyl methyltransferase NA29_RS00170 PF06441 Epoxide hydrolase N terminus NA29_RS00175 PF02566 OsmC-like protein NA29_RS00180 PF01047 MarR family NA29_RS00185 PF03466 LysR substrate binding domain NA29_RS00185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00195 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS00200 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS00205 PF00005 ABC transporter NA29_RS00220 PF01053 Cys/Met metabolism PLP-dependent enzyme NA29_RS00225 PF00144 Beta-lactamase NA29_RS00235 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS00240 PF17933 Tetracyclin repressor-like, C-terminal domain NA29_RS00240 PF00440 Bacterial regulatory proteins, tetR family NA29_RS00250 PF01266 FAD dependent oxidoreductase NA29_RS00260 PF07715 TonB-dependent Receptor Plug Domain NA29_RS00260 PF00593 TonB dependent receptor NA29_RS00275 PF17755 UvrA DNA-binding domain NA29_RS00275 PF17760 UvrA interaction domain NA29_RS00275 PF00005 ABC transporter NA29_RS00290 PF01053 Cys/Met metabolism PLP-dependent enzyme NA29_RS00295 PF02673 Bacitracin resistance protein BacA NA29_RS00300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00300 PF03466 LysR substrate binding domain NA29_RS00305 PF00465 Iron-containing alcohol dehydrogenase NA29_RS00310 PF00083 Sugar (and other) transporter NA29_RS00350 PF00860 Permease family NA29_RS00355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00355 PF03466 LysR substrate binding domain NA29_RS00360 PF01156 Inosine-uridine preferring nucleoside hydrolase NA29_RS00365 PF00267 Gram-negative porin NA29_RS00375 PF04286 Protein of unknown function (DUF445) NA29_RS00385 PF01274 Malate synthase NA29_RS00390 PF03575 Peptidase family S51 NA29_RS00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00415 PF03466 LysR substrate binding domain NA29_RS00425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00425 PF03466 LysR substrate binding domain NA29_RS00430 PF07690 Major Facilitator Superfamily NA29_RS00435 PF03459 TOBE domain NA29_RS00435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00440 PF00196 Bacterial regulatory proteins, luxR family NA29_RS00440 PF00563 EAL domain NA29_RS00445 PF07690 Major Facilitator Superfamily NA29_RS00455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NA29_RS00470 PF00202 Aminotransferase class-III NA29_RS00475 PF05853 beta-keto acid cleavage enzyme NA29_RS00480 PF02743 Cache domain NA29_RS00480 PF00672 HAMP domain NA29_RS00480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS00490 PF01739 CheR methyltransferase, SAM binding domain NA29_RS00495 PF01584 CheW-like domain NA29_RS00500 PF01584 CheW-like domain NA29_RS00500 PF01627 Hpt domain NA29_RS00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS00500 PF00072 Response regulator receiver domain NA29_RS00505 PF01339 CheB methylesterase NA29_RS00505 PF00072 Response regulator receiver domain NA29_RS00510 PF00563 EAL domain NA29_RS00510 PF01590 GAF domain NA29_RS00510 PF00360 Phytochrome region NA29_RS00510 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS00535 PF07687 Peptidase dimerisation domain NA29_RS00535 PF01546 Peptidase family M20/M25/M40 NA29_RS00540 PF00083 Sugar (and other) transporter NA29_RS00540 PF08946 Osmosensory transporter coiled coil NA29_RS00545 PF00108 Thiolase, N-terminal domain NA29_RS00545 PF02803 Thiolase, C-terminal domain NA29_RS00550 PF07171 MlrC C-terminus NA29_RS00550 PF07364 Metallopeptidase family M81 NA29_RS00555 PF01546 Peptidase family M20/M25/M40 NA29_RS00555 PF07687 Peptidase dimerisation domain NA29_RS00560 PF00005 ABC transporter NA29_RS00565 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS00565 PF00005 ABC transporter NA29_RS00575 PF02653 Branched-chain amino acid transport system / permease component NA29_RS00585 PF07729 FCD domain NA29_RS00585 PF00392 Bacterial regulatory proteins, gntR family NA29_RS00590 PF04371 Porphyromonas-type peptidyl-arginine deiminase NA29_RS00600 PF13191 AAA ATPase domain NA29_RS00600 PF00211 Adenylate and Guanylate cyclase catalytic domain NA29_RS00605 PF09084 NMT1/THI5 like NA29_RS00610 PF00593 TonB dependent receptor NA29_RS00610 PF07715 TonB-dependent Receptor Plug Domain NA29_RS00615 PF13640 2OG-Fe(II) oxygenase superfamily NA29_RS00615 PF18331 PKHD-type hydroxylase C-terminal domain NA29_RS00645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS00645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NA29_RS00645 PF01842 ACT domain NA29_RS00650 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NA29_RS00650 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NA29_RS00665 PF00196 Bacterial regulatory proteins, luxR family NA29_RS00665 PF00072 Response regulator receiver domain NA29_RS00670 PF17200 Single Cache domain 2 NA29_RS00670 PF07730 Histidine kinase NA29_RS00675 PF02554 Carbon starvation protein CstA NA29_RS00675 PF13722 5TM C-terminal transporter carbon starvation CstA NA29_RS00680 PF04328 Selenoprotein, putative NA29_RS00685 PF04055 Radical SAM superfamily NA29_RS00685 PF06969 HemN C-terminal domain NA29_RS00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS00690 PF03466 LysR substrate binding domain NA29_RS00695 PF01131 DNA topoisomerase NA29_RS00695 PF01751 Toprim domain NA29_RS00705 PF17782 DprA winged helix domain NA29_RS00705 PF02481 DNA recombination-mediator protein A NA29_RS00710 PF01327 Polypeptide deformylase NA29_RS00720 PF00551 Formyl transferase NA29_RS00720 PF02911 Formyl transferase, C-terminal domain NA29_RS00725 PF01435 Peptidase family M48 NA29_RS00730 PF01189 16S rRNA methyltransferase RsmB/F NA29_RS00730 PF01029 NusB family NA29_RS00740 PF00672 HAMP domain NA29_RS00740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS00740 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS00740 PF00989 PAS fold NA29_RS00745 PF00072 Response regulator receiver domain NA29_RS00745 PF00158 Sigma-54 interaction domain NA29_RS00745 PF00072 Response regulator receiver domain NA29_RS00745 PF02954 Bacterial regulatory protein, Fis family NA29_RS00745 PF02954 Bacterial regulatory protein, Fis family NA29_RS00745 PF00158 Sigma-54 interaction domain NA29_RS00755 PF06508 Queuosine biosynthesis protein QueC NA29_RS00765 PF01242 6-pyruvoyl tetrahydropterin synthase NA29_RS00780 PF09480 Type III secretion system protein PrgH-EprH (PrgH) NA29_RS00795 PF01514 Secretory protein of YscJ/FliF family NA29_RS00815 PF12833 Helix-turn-helix domain NA29_RS00820 PF03958 Bacterial type II/III secretion system short domain NA29_RS00820 PF00263 Bacterial type II and III secretion system protein NA29_RS00825 PF07201 HrpJ-like domain NA29_RS00830 PF00771 FHIPEP family NA29_RS00835 PF02874 ATP synthase alpha/beta family, beta-barrel domain NA29_RS00835 PF18269 T3SS EscN ATPase C-terminal domain NA29_RS00835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NA29_RS00850 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NA29_RS00855 PF00813 FliP family NA29_RS00860 PF01313 Bacterial export proteins, family 3 NA29_RS00865 PF01311 Bacterial export proteins, family 1 NA29_RS00870 PF01312 FlhB HrpN YscU SpaS Family NA29_RS00875 PF07720 Tetratricopeptide repeat NA29_RS00880 PF04888 Secretion system effector C (SseC) like family NA29_RS00880 PF16535 Type III cell invasion protein SipB NA29_RS00890 PF06511 Type III secretion systems tip complex components NA29_RS00895 PF00486 Transcriptional regulatory protein, C terminal NA29_RS00925 PF00102 Protein-tyrosine phosphatase NA29_RS00925 PF09013 YopH, N-terminal NA29_RS00940 PF01098 Cell cycle protein NA29_RS00945 PF03717 Penicillin-binding Protein dimerisation domain NA29_RS00945 PF00905 Penicillin binding protein transpeptidase domain NA29_RS00955 PF04085 rod shape-determining protein MreC NA29_RS00965 PF02686 Glu-tRNAGln amidotransferase C subunit NA29_RS00970 PF01425 Amidase NA29_RS00980 PF02637 GatB domain NA29_RS00980 PF02934 GatB/GatE catalytic domain NA29_RS00985 PF03976 Polyphosphate kinase 2 (PPK2) NA29_RS00990 PF13533 Biotin-lipoyl like NA29_RS00995 PF00873 AcrB/AcrD/AcrF family NA29_RS01025 PF00437 Type II/IV secretion system protein NA29_RS01035 PF01478 Type IV leader peptidase family NA29_RS01035 PF06750 Bacterial Peptidase A24 N-terminal domain NA29_RS01040 PF00732 GMC oxidoreductase NA29_RS01040 PF05199 GMC oxidoreductase NA29_RS01045 PF18158 Adaptive response protein AidB N-terminal domain NA29_RS01045 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS01045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS01050 PF00171 Aldehyde dehydrogenase family NA29_RS01055 PF02773 S-adenosylmethionine synthetase, C-terminal domain NA29_RS01055 PF02772 S-adenosylmethionine synthetase, central domain NA29_RS01055 PF00438 S-adenosylmethionine synthetase, N-terminal domain NA29_RS01060 PF03279 Bacterial lipid A biosynthesis acyltransferase NA29_RS01065 PF01678 Diaminopimelate epimerase NA29_RS01075 PF00589 Phage integrase family NA29_RS01075 PF02899 Phage integrase, N-terminal SAM-like domain NA29_RS01080 PF17785 PUA-like domain NA29_RS01080 PF10672 S-adenosylmethionine-dependent methyltransferase NA29_RS01095 PF07683 Cobalamin synthesis protein cobW C-terminal domain NA29_RS01095 PF02492 CobW/HypB/UreG, nucleotide-binding domain NA29_RS01100 PF01258 Prokaryotic dksA/traR C4-type zinc finger NA29_RS01110 PF07715 TonB-dependent Receptor Plug Domain NA29_RS01110 PF00593 TonB dependent receptor NA29_RS01115 PF00227 Proteasome subunit NA29_RS01120 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS01120 PF07724 AAA domain (Cdc48 subfamily) NA29_RS01125 PF00072 Response regulator receiver domain NA29_RS01145 PF00696 Amino acid kinase family NA29_RS01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS01155 PF03466 LysR substrate binding domain NA29_RS01160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS01160 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS01160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS01165 PF00171 Aldehyde dehydrogenase family NA29_RS01170 PF00083 Sugar (and other) transporter NA29_RS01170 PF07690 Major Facilitator Superfamily NA29_RS01175 PF00175 Oxidoreductase NAD-binding domain NA29_RS01175 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS01180 PF00355 Rieske [2Fe-2S] domain NA29_RS01185 PF07702 UTRA domain NA29_RS01185 PF00392 Bacterial regulatory proteins, gntR family NA29_RS01190 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS01195 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit NA29_RS01195 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS01200 PF03466 LysR substrate binding domain NA29_RS01200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS01205 PF13458 Periplasmic binding protein NA29_RS01220 PF00005 ABC transporter NA29_RS01225 PF00005 ABC transporter NA29_RS01230 PF02585 GlcNAc-PI de-N-acetylase NA29_RS01235 PF03737 Aldolase/RraA NA29_RS01240 PF04303 PrpF protein NA29_RS01255 PF13609 Gram-negative porin NA29_RS01260 PF07690 Major Facilitator Superfamily NA29_RS01270 PF00440 Bacterial regulatory proteins, tetR family NA29_RS01275 PF00561 alpha/beta hydrolase fold NA29_RS01280 PF07021 Methionine biosynthesis protein MetW NA29_RS01280 PF00561 alpha/beta hydrolase fold NA29_RS01285 PF07690 Major Facilitator Superfamily NA29_RS01295 PF03372 Endonuclease/Exonuclease/phosphatase family NA29_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS01300 PF03466 LysR substrate binding domain NA29_RS01305 PF03788 LrgA family NA29_RS01310 PF04172 LrgB-like family NA29_RS01315 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NA29_RS01315 PF05221 S-adenosyl-L-homocysteine hydrolase NA29_RS01320 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NA29_RS01330 PF02219 Methylenetetrahydrofolate reductase NA29_RS01335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NA29_RS01340 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS01345 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS01345 PF12911 N-terminal TM domain of oligopeptide transport permease C NA29_RS01350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS01350 PF00005 ABC transporter NA29_RS01355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS01355 PF00005 ABC transporter NA29_RS01365 PF02492 CobW/HypB/UreG, nucleotide-binding domain NA29_RS01370 PF01730 UreF NA29_RS01375 PF05194 UreE urease accessory protein, C-terminal domain NA29_RS01375 PF02814 UreE urease accessory protein, N-terminal domain NA29_RS01380 PF01979 Amidohydrolase family NA29_RS01380 PF00449 Urease alpha-subunit, N-terminal domain NA29_RS01385 PF00699 Urease beta subunit NA29_RS01390 PF04955 HupE / UreJ protein NA29_RS01395 PF00547 Urease, gamma subunit NA29_RS01400 PF00005 ABC transporter NA29_RS01405 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS01410 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS01415 PF01774 UreD urease accessory protein NA29_RS01420 PF00005 ABC transporter NA29_RS01425 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS01425 PF00005 ABC transporter NA29_RS01430 PF02653 Branched-chain amino acid transport system / permease component NA29_RS01435 PF02653 Branched-chain amino acid transport system / permease component NA29_RS01450 PF07690 Major Facilitator Superfamily NA29_RS01455 PF01965 DJ-1/PfpI family NA29_RS01465 PF00155 Aminotransferase class I and II NA29_RS01470 PF00202 Aminotransferase class-III NA29_RS01475 PF00171 Aldehyde dehydrogenase family NA29_RS01480 PF03746 LamB/YcsF family NA29_RS01485 PF02626 Carboxyltransferase domain, subdomain A and B NA29_RS01490 PF02682 Carboxyltransferase domain, subdomain C and D NA29_RS01500 PF14718 Soluble lytic murein transglycosylase L domain NA29_RS01500 PF01464 Transglycosylase SLT domain NA29_RS01505 PF01370 NAD dependent epimerase/dehydratase family NA29_RS01515 PF12627 Probable RNA and SrmB- binding site of polymerase A NA29_RS01515 PF01743 Poly A polymerase head domain NA29_RS01515 PF01966 HD domain NA29_RS01520 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS01540 PF02152 Dihydroneopterin aldolase NA29_RS01545 PF01171 PP-loop family NA29_RS01550 PF12804 MobA-like NTP transferase domain NA29_RS01550 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS01550 PF14602 Hexapeptide repeat of succinyl-transferase NA29_RS01555 PF01380 SIS domain NA29_RS01575 PF13609 Gram-negative porin NA29_RS01580 PF01464 Transglycosylase SLT domain NA29_RS01590 PF13609 Gram-negative porin NA29_RS01595 PF00005 ABC transporter NA29_RS01595 PF08402 TOBE domain NA29_RS01610 PF00486 Transcriptional regulatory protein, C terminal NA29_RS01610 PF00072 Response regulator receiver domain NA29_RS01615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS01615 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS01615 PF08521 Two-component sensor kinase N-terminal NA29_RS01620 PF00266 Aminotransferase class-V NA29_RS01630 PF00199 Catalase NA29_RS01630 PF06628 Catalase-related immune-responsive NA29_RS01635 PF00654 Voltage gated chloride channel NA29_RS01645 PF00580 UvrD/REP helicase N-terminal domain NA29_RS01645 PF13361 UvrD-like helicase C-terminal domain NA29_RS01680 PF00764 Arginosuccinate synthase NA29_RS01685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS01685 PF03466 LysR substrate binding domain NA29_RS01700 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS01705 PF03466 LysR substrate binding domain NA29_RS01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS01725 PF07690 Major Facilitator Superfamily NA29_RS01735 PF01494 FAD binding domain NA29_RS01745 PF04185 Phosphoesterase family NA29_RS01750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS01750 PF03466 LysR substrate binding domain NA29_RS01765 PF13532 2OG-Fe(II) oxygenase superfamily NA29_RS01770 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA NA29_RS01775 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NA29_RS01775 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NA29_RS01775 PF02805 Metal binding domain of Ada NA29_RS01775 PF12833 Helix-turn-helix domain NA29_RS01790 PF02492 CobW/HypB/UreG, nucleotide-binding domain NA29_RS01790 PF07683 Cobalamin synthesis protein cobW C-terminal domain NA29_RS01800 PF17954 Quercetinase C-terminal cupin domain NA29_RS01800 PF02678 Pirin NA29_RS01805 PF02567 Phenazine biosynthesis-like protein NA29_RS01810 PF01205 Uncharacterized protein family UPF0029 NA29_RS01810 PF09186 Domain of unknown function (DUF1949) NA29_RS01820 PF10518 TAT (twin-arginine translocation) pathway signal sequence NA29_RS01820 PF07732 Multicopper oxidase NA29_RS01820 PF00394 Multicopper oxidase NA29_RS01820 PF07731 Multicopper oxidase NA29_RS01860 PF13609 Gram-negative porin NA29_RS01865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NA29_RS01865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NA29_RS01925 PF00682 HMGL-like NA29_RS01930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS01935 PF07152 YaeQ protein NA29_RS01950 PF01381 Helix-turn-helix NA29_RS01955 PF00892 EamA-like transporter family NA29_RS01960 PF05230 MASE2 domain NA29_RS01960 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS01975 PF13609 Gram-negative porin NA29_RS01980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NA29_RS01980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NA29_RS01985 PF02311 AraC-like ligand binding domain NA29_RS01985 PF12833 Helix-turn-helix domain NA29_RS01990 PF18140 Propionyl-coenzyme A carboxylase BT domain NA29_RS01990 PF00289 Biotin carboxylase, N-terminal domain NA29_RS01990 PF00364 Biotin-requiring enzyme NA29_RS01990 PF02785 Biotin carboxylase C-terminal domain NA29_RS01990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NA29_RS01995 PF04055 Radical SAM superfamily NA29_RS01995 PF06968 Biotin and Thiamin Synthesis associated domain NA29_RS02005 PF00155 Aminotransferase class I and II NA29_RS02010 PF00202 Aminotransferase class-III NA29_RS02015 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS02020 PF01039 Carboxyl transferase domain NA29_RS02035 PF00106 short chain dehydrogenase NA29_RS02040 PF02803 Thiolase, C-terminal domain NA29_RS02040 PF00108 Thiolase, N-terminal domain NA29_RS02045 PF00484 Carbonic anhydrase NA29_RS02050 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NA29_RS02055 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS02055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS02055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS02060 PF03061 Thioesterase superfamily NA29_RS02065 PF13411 MerR HTH family regulatory protein NA29_RS02070 PF00753 Metallo-beta-lactamase superfamily NA29_RS02075 PF07690 Major Facilitator Superfamily NA29_RS02090 PF13462 Thioredoxin NA29_RS02100 PF03485 Arginyl tRNA synthetase N terminal domain NA29_RS02100 PF00750 tRNA synthetases class I (R) NA29_RS02100 PF05746 DALR anticodon binding domain NA29_RS02115 PF02308 MgtC family NA29_RS02120 PF00809 Pterin binding enzyme NA29_RS02120 PF02574 Homocysteine S-methyltransferase NA29_RS02120 PF02607 B12 binding domain NA29_RS02120 PF02310 B12 binding domain NA29_RS02120 PF02965 Vitamin B12 dependent methionine synthase, activation domain NA29_RS02125 PF02310 B12 binding domain NA29_RS02125 PF02574 Homocysteine S-methyltransferase NA29_RS02125 PF00809 Pterin binding enzyme NA29_RS02125 PF02607 B12 binding domain NA29_RS02125 PF02965 Vitamin B12 dependent methionine synthase, activation domain NA29_RS02135 PF12091 Protein of unknown function (DUF3567) NA29_RS02140 PF00561 alpha/beta hydrolase fold NA29_RS02165 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS02185 PF01810 LysE type translocator NA29_RS02205 PF01467 Cytidylyltransferase-like NA29_RS02220 PF03309 Type III pantothenate kinase NA29_RS02225 PF03099 Biotin/lipoate A/B protein ligase family NA29_RS02225 PF02237 Biotin protein ligase C terminal domain NA29_RS02230 PF02405 Permease MlaE NA29_RS02235 PF00005 ABC transporter NA29_RS02255 PF07690 Major Facilitator Superfamily NA29_RS02270 PF00768 D-alanyl-D-alanine carboxypeptidase NA29_RS02270 PF07943 Penicillin-binding protein 5, C-terminal domain NA29_RS02275 PF01063 Amino-transferase class IV NA29_RS02280 PF04359 Protein of unknown function (DUF493) NA29_RS02285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS02285 PF03466 LysR substrate binding domain NA29_RS02300 PF03099 Biotin/lipoate A/B protein ligase family NA29_RS02305 PF04055 Radical SAM superfamily NA29_RS02305 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NA29_RS02315 PF01614 Bacterial transcriptional regulator NA29_RS02315 PF09339 IclR helix-turn-helix domain NA29_RS02325 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS02330 PF00005 ABC transporter NA29_RS02335 PF00375 Sodium:dicarboxylate symporter family NA29_RS02340 PF02743 Cache domain NA29_RS02340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS02340 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS02345 PF00158 Sigma-54 interaction domain NA29_RS02345 PF00072 Response regulator receiver domain NA29_RS02345 PF02954 Bacterial regulatory protein, Fis family NA29_RS02350 PF00484 Carbonic anhydrase NA29_RS02355 PF00578 AhpC/TSA family NA29_RS02370 PF13335 Magnesium chelatase, subunit ChlI C-terminal NA29_RS02370 PF01078 Magnesium chelatase, subunit ChlI NA29_RS02375 PF04380 Membrane fusogenic activity NA29_RS02385 PF00543 Nitrogen regulatory protein P-II NA29_RS02390 PF00909 Ammonium Transporter Family NA29_RS02405 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NA29_RS02405 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NA29_RS02415 PF00381 PTS HPr component phosphorylation site NA29_RS02420 PF00391 PEP-utilising enzyme, mobile domain NA29_RS02420 PF05524 PEP-utilising enzyme, N-terminal NA29_RS02420 PF02896 PEP-utilising enzyme, TIM barrel domain NA29_RS02425 PF00899 ThiF family NA29_RS02430 PF03572 Peptidase family S41 NA29_RS02430 PF13180 PDZ domain NA29_RS02435 PF00300 Histidine phosphatase superfamily (branch 1) NA29_RS02440 PF00581 Rhodanese-like domain NA29_RS02445 PF00462 Glutaredoxin NA29_RS02450 PF02556 Preprotein translocase subunit SecB NA29_RS02455 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NA29_RS02455 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NA29_RS02460 PF01661 Macro domain NA29_RS02465 PF00588 SpoU rRNA Methylase family NA29_RS02470 PF00156 Phosphoribosyl transferase domain NA29_RS02475 PF08241 Methyltransferase domain NA29_RS02480 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS02485 PF02423 Ornithine cyclodeaminase/mu-crystallin family NA29_RS02490 PF00709 Adenylosuccinate synthetase NA29_RS02505 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS02510 PF01266 FAD dependent oxidoreductase NA29_RS02515 PF01613 Flavin reductase like domain NA29_RS02520 PF00196 Bacterial regulatory proteins, luxR family NA29_RS02520 PF03472 Autoinducer binding domain NA29_RS02530 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NA29_RS02530 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NA29_RS02535 PF00115 Cytochrome C and Quinol oxidase polypeptide I NA29_RS02540 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NA29_RS02550 PF00510 Cytochrome c oxidase subunit III NA29_RS02570 PF02628 Cytochrome oxidase assembly protein NA29_RS02575 PF01040 UbiA prenyltransferase family NA29_RS02580 PF02630 SCO1/SenC NA29_RS02590 PF02322 Cytochrome bd terminal oxidase subunit II NA29_RS02595 PF01654 Cytochrome bd terminal oxidase subunit I NA29_RS02605 PF04545 Sigma-70, region 4 NA29_RS02605 PF00140 Sigma-70 factor, region 1.2 NA29_RS02605 PF04542 Sigma-70 region 2 NA29_RS02615 PF02885 Glycosyl transferase family, helical bundle domain NA29_RS02620 PF14497 Glutathione S-transferase, C-terminal domain NA29_RS02620 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS02625 PF01810 LysE type translocator NA29_RS02630 PF00448 SRP54-type protein, GTPase domain NA29_RS02630 PF02881 SRP54-type protein, helical bundle domain NA29_RS02635 PF00675 Insulinase (Peptidase family M16) NA29_RS02635 PF05193 Peptidase M16 inactive domain NA29_RS02640 PF05193 Peptidase M16 inactive domain NA29_RS02645 PF01061 ABC-2 type transporter NA29_RS02650 PF00005 ABC transporter NA29_RS02660 PF01467 Cytidylyltransferase-like NA29_RS02670 PF00037 4Fe-4S binding domain NA29_RS02675 PF01195 Peptidyl-tRNA hydrolase NA29_RS02680 PF01386 Ribosomal L25p family NA29_RS02680 PF14693 Ribosomal protein TL5, C-terminal domain NA29_RS02685 PF14572 Phosphoribosyl synthetase-associated domain NA29_RS02685 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NA29_RS02695 PF08544 GHMP kinases C terminal NA29_RS02695 PF00288 GHMP kinases N terminal domain NA29_RS02700 PF03550 Outer membrane lipoprotein LolB NA29_RS02710 PF06827 Zinc finger found in FPG and IleRS NA29_RS02710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NA29_RS02710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NA29_RS02715 PF14815 NUDIX domain NA29_RS02715 PF10576 Iron-sulfur binding domain of endonuclease III NA29_RS02715 PF00633 Helix-hairpin-helix motif NA29_RS02715 PF00730 HhH-GPD superfamily base excision DNA repair protein NA29_RS02720 PF03668 P-loop ATPase protein family NA29_RS02730 PF07475 HPr Serine kinase C-terminal domain NA29_RS02730 PF02603 HPr Serine kinase N terminus NA29_RS02735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NA29_RS02740 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NA29_RS02745 PF00309 Sigma-54 factor, Activator interacting domain (AID) NA29_RS02745 PF04963 Sigma-54 factor, core binding domain NA29_RS02745 PF04552 Sigma-54, DNA binding domain NA29_RS02750 PF00005 ABC transporter NA29_RS02750 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS02770 PF01380 SIS domain NA29_RS02770 PF00571 CBS domain NA29_RS02775 PF00999 Sodium/hydrogen exchanger family NA29_RS02775 PF02080 TrkA-C domain NA29_RS02775 PF02254 TrkA-N domain NA29_RS02780 PF00156 Phosphoribosyl transferase domain NA29_RS02790 PF00455 DeoR C terminal sensor domain NA29_RS02790 PF08220 DeoR-like helix-turn-helix domain NA29_RS02795 PF00005 ABC transporter NA29_RS02805 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS02810 PF07969 Amidohydrolase family NA29_RS02815 PF00005 ABC transporter NA29_RS02820 PF00005 ABC transporter NA29_RS02825 PF06007 Phosphonate metabolism protein PhnJ NA29_RS02830 PF05861 Bacterial phosphonate metabolism protein (PhnI) NA29_RS02835 PF05845 Bacterial phosphonate metabolism protein (PhnH) NA29_RS02840 PF06754 Phosphonate metabolism protein PhnG NA29_RS02845 PF07702 UTRA domain NA29_RS02845 PF00392 Bacterial regulatory proteins, gntR family NA29_RS02850 PF06299 Protein of unknown function (DUF1045) NA29_RS02865 PF01872 RibD C-terminal domain NA29_RS02870 PF08669 Glycine cleavage T-protein C-terminal barrel domain NA29_RS02870 PF01571 Aminomethyltransferase folate-binding domain NA29_RS02870 PF16350 FAD dependent oxidoreductase central domain NA29_RS02870 PF01266 FAD dependent oxidoreductase NA29_RS02880 PF00551 Formyl transferase NA29_RS02885 PF07690 Major Facilitator Superfamily NA29_RS02940 PF00266 Aminotransferase class-V NA29_RS02945 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS02950 PF00005 ABC transporter NA29_RS02960 PF00392 Bacterial regulatory proteins, gntR family NA29_RS02960 PF07729 FCD domain NA29_RS02965 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase NA29_RS02970 PF00171 Aldehyde dehydrogenase family NA29_RS02975 PF02690 Na+/Pi-cotransporter NA29_RS02980 PF01966 HD domain NA29_RS02995 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS03000 PF13309 HTH domain NA29_RS03000 PF08348 YheO-like PAS domain NA29_RS03010 PF17755 UvrA DNA-binding domain NA29_RS03010 PF17760 UvrA interaction domain NA29_RS03015 PF07690 Major Facilitator Superfamily NA29_RS03020 PF00436 Single-strand binding protein family NA29_RS03025 PF01381 Helix-turn-helix NA29_RS03035 PF02086 D12 class N6 adenine-specific DNA methyltransferase NA29_RS03090 PF01734 Patatin-like phospholipase NA29_RS03095 PF00672 HAMP domain NA29_RS03095 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS03095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS03100 PF00072 Response regulator receiver domain NA29_RS03100 PF00486 Transcriptional regulatory protein, C terminal NA29_RS03105 PF07681 DoxX NA29_RS03115 PF07729 FCD domain NA29_RS03115 PF00392 Bacterial regulatory proteins, gntR family NA29_RS03125 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS03130 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS03135 PF00005 ABC transporter NA29_RS03140 PF00356 Bacterial regulatory proteins, lacI family NA29_RS03145 PF16655 PhoD-like phosphatase, N-terminal domain NA29_RS03145 PF09423 PhoD-like phosphatase NA29_RS03150 PF01966 HD domain NA29_RS03160 PF01037 Lrp/AsnC ligand binding domain NA29_RS03165 PF01546 Peptidase family M20/M25/M40 NA29_RS03165 PF07687 Peptidase dimerisation domain NA29_RS03170 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS03175 PF01546 Peptidase family M20/M25/M40 NA29_RS03175 PF07687 Peptidase dimerisation domain NA29_RS03180 PF00392 Bacterial regulatory proteins, gntR family NA29_RS03180 PF07729 FCD domain NA29_RS03185 PF00171 Aldehyde dehydrogenase family NA29_RS03190 PF00155 Aminotransferase class I and II NA29_RS03195 PF00171 Aldehyde dehydrogenase family NA29_RS03205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03205 PF03466 LysR substrate binding domain NA29_RS03215 PF01063 Amino-transferase class IV NA29_RS03225 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS03225 PF14834 Glutathione S-transferase, C-terminal domain NA29_RS03230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03230 PF03466 LysR substrate binding domain NA29_RS03235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03235 PF03466 LysR substrate binding domain NA29_RS03250 PF07690 Major Facilitator Superfamily NA29_RS03255 PF13609 Gram-negative porin NA29_RS03260 PF00248 Aldo/keto reductase family NA29_RS03265 PF12833 Helix-turn-helix domain NA29_RS03265 PF06719 AraC-type transcriptional regulator N-terminus NA29_RS03275 PF04221 RelB antitoxin NA29_RS03285 PF02735 Ku70/Ku80 beta-barrel domain NA29_RS03300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS03300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NA29_RS03305 PF07690 Major Facilitator Superfamily NA29_RS03310 PF01494 FAD binding domain NA29_RS03315 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS03315 PF14497 Glutathione S-transferase, C-terminal domain NA29_RS03320 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS03325 PF07883 Cupin domain NA29_RS03330 PF03466 LysR substrate binding domain NA29_RS03330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03335 PF07499 RuvA, C-terminal domain NA29_RS03335 PF01330 RuvA N terminal domain NA29_RS03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03340 PF03466 LysR substrate binding domain NA29_RS03345 PF07739 TipAS antibiotic-recognition domain NA29_RS03345 PF13411 MerR HTH family regulatory protein NA29_RS03355 PF00083 Sugar (and other) transporter NA29_RS03360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS03370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03370 PF03466 LysR substrate binding domain NA29_RS03380 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS03390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03390 PF03466 LysR substrate binding domain NA29_RS03395 PF07690 Major Facilitator Superfamily NA29_RS03400 PF03928 Haem-degrading NA29_RS03405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03405 PF03466 LysR substrate binding domain NA29_RS03410 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NA29_RS03410 PF17287 POTRA domain NA29_RS03410 PF08479 POTRA domain, ShlB-type NA29_RS03415 PF05594 Haemagluttinin repeat NA29_RS03415 PF05860 haemagglutination activity domain NA29_RS03415 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain NA29_RS03415 PF13018 Extended Signal Peptide of Type V secretion system NA29_RS03415 PF13332 Hemagglutinin repeat NA29_RS03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03440 PF03466 LysR substrate binding domain NA29_RS03445 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS03455 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS03460 PF00491 Arginase family NA29_RS03465 PF00005 ABC transporter NA29_RS03470 PF01042 Endoribonuclease L-PSP NA29_RS03480 PF01638 HxlR-like helix-turn-helix NA29_RS03485 PF00043 Glutathione S-transferase, C-terminal domain NA29_RS03485 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS03490 PF01494 FAD binding domain NA29_RS03505 PF00440 Bacterial regulatory proteins, tetR family NA29_RS03515 PF07690 Major Facilitator Superfamily NA29_RS03520 PF07690 Major Facilitator Superfamily NA29_RS03530 PF00890 FAD binding domain NA29_RS03530 PF04205 FMN-binding domain NA29_RS03535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03535 PF03466 LysR substrate binding domain NA29_RS03540 PF01614 Bacterial transcriptional regulator NA29_RS03540 PF09339 IclR helix-turn-helix domain NA29_RS03545 PF01494 FAD binding domain NA29_RS03550 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS03555 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS03560 PF07690 Major Facilitator Superfamily NA29_RS03570 PF03466 LysR substrate binding domain NA29_RS03570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03575 PF00501 AMP-binding enzyme NA29_RS03575 PF13193 AMP-binding enzyme C-terminal domain NA29_RS03580 PF00083 Sugar (and other) transporter NA29_RS03600 PF01738 Dienelactone hydrolase family NA29_RS03605 PF13609 Gram-negative porin NA29_RS03610 PF00753 Metallo-beta-lactamase superfamily NA29_RS03615 PF07690 Major Facilitator Superfamily NA29_RS03635 PF01638 HxlR-like helix-turn-helix NA29_RS03640 PF00296 Luciferase-like monooxygenase NA29_RS03645 PF01266 FAD dependent oxidoreductase NA29_RS03650 PF00248 Aldo/keto reductase family NA29_RS03655 PF01292 Prokaryotic cytochrome b561 NA29_RS03660 PF00593 TonB dependent receptor NA29_RS03660 PF07715 TonB-dependent Receptor Plug Domain NA29_RS03670 PF03922 OmpW family NA29_RS03675 PF00905 Penicillin binding protein transpeptidase domain NA29_RS03675 PF00912 Transglycosylase NA29_RS03680 PF03466 LysR substrate binding domain NA29_RS03680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03690 PF01209 ubiE/COQ5 methyltransferase family NA29_RS03695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NA29_RS03695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS03700 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS03705 PF00561 alpha/beta hydrolase fold NA29_RS03710 PF00155 Aminotransferase class I and II NA29_RS03715 PF00324 Amino acid permease NA29_RS03720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NA29_RS03725 PF01037 Lrp/AsnC ligand binding domain NA29_RS03730 PF08502 LeuA allosteric (dimerisation) domain NA29_RS03730 PF00682 HMGL-like NA29_RS03735 PF02803 Thiolase, C-terminal domain NA29_RS03735 PF00108 Thiolase, N-terminal domain NA29_RS03740 PF01144 Coenzyme A transferase NA29_RS03745 PF01144 Coenzyme A transferase NA29_RS03750 PF09339 IclR helix-turn-helix domain NA29_RS03750 PF01614 Bacterial transcriptional regulator NA29_RS03760 PF01494 FAD binding domain NA29_RS03780 PF00328 Histidine phosphatase superfamily (branch 2) NA29_RS03790 PF01047 MarR family NA29_RS03800 PF07690 Major Facilitator Superfamily NA29_RS03805 PF04349 Periplasmic glucan biosynthesis protein, MdoG NA29_RS03810 PF01915 Glycosyl hydrolase family 3 C-terminal domain NA29_RS03810 PF00933 Glycosyl hydrolase family 3 N terminal domain NA29_RS03810 PF14310 Fibronectin type III-like domain NA29_RS03815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03815 PF03466 LysR substrate binding domain NA29_RS03820 PF00180 Isocitrate/isopropylmalate dehydrogenase NA29_RS03825 PF00296 Luciferase-like monooxygenase NA29_RS03835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS03835 PF03466 LysR substrate binding domain NA29_RS03840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NA29_RS03855 PF00083 Sugar (and other) transporter NA29_RS03860 PF05199 GMC oxidoreductase NA29_RS03860 PF00732 GMC oxidoreductase NA29_RS03865 PF09339 IclR helix-turn-helix domain NA29_RS03865 PF01614 Bacterial transcriptional regulator NA29_RS03870 PF01614 Bacterial transcriptional regulator NA29_RS03870 PF09339 IclR helix-turn-helix domain NA29_RS03875 PF07728 AAA domain (dynein-related subfamily) NA29_RS03875 PF08406 CbbQ/NirQ/NorQ C-terminal NA29_RS03875 PF12556 Cobaltochelatase CobS subunit N terminal NA29_RS03880 PF11775 Cobalamin biosynthesis protein CobT VWA domain NA29_RS03880 PF06213 Cobalamin biosynthesis protein CobT NA29_RS03885 PF01925 Sulfite exporter TauE/SafE NA29_RS03890 PF01515 Phosphate acetyl/butaryl transferase NA29_RS03895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS03895 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS03895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS03905 PF01494 FAD binding domain NA29_RS03925 PF00474 Sodium:solute symporter family NA29_RS03930 PF01979 Amidohydrolase family NA29_RS03935 PF07683 Cobalamin synthesis protein cobW C-terminal domain NA29_RS03935 PF02492 CobW/HypB/UreG, nucleotide-binding domain NA29_RS03960 PF00324 Amino acid permease NA29_RS03965 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS03970 PF00005 ABC transporter NA29_RS03975 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NA29_RS03980 PF00155 Aminotransferase class I and II NA29_RS03980 PF00392 Bacterial regulatory proteins, gntR family NA29_RS03985 PF13417 Glutathione S-transferase, N-terminal domain NA29_RS03985 PF00043 Glutathione S-transferase, C-terminal domain NA29_RS03995 PF13609 Gram-negative porin NA29_RS04005 PF00682 HMGL-like NA29_RS04010 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS04015 PF02515 CoA-transferase family III NA29_RS04020 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS04025 PF00501 AMP-binding enzyme NA29_RS04025 PF13193 AMP-binding enzyme C-terminal domain NA29_RS04030 PF07690 Major Facilitator Superfamily NA29_RS04040 PF03060 Nitronate monooxygenase NA29_RS04045 PF12697 Alpha/beta hydrolase family NA29_RS04050 PF00486 Transcriptional regulatory protein, C terminal NA29_RS04050 PF00072 Response regulator receiver domain NA29_RS04055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS04055 PF00672 HAMP domain NA29_RS04055 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS04065 PF01613 Flavin reductase like domain NA29_RS04070 PF00296 Luciferase-like monooxygenase NA29_RS04075 PF00005 ABC transporter NA29_RS04080 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS04085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04085 PF03466 LysR substrate binding domain NA29_RS04090 PF00892 EamA-like transporter family NA29_RS04095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NA29_RS04100 PF00248 Aldo/keto reductase family NA29_RS04105 PF07690 Major Facilitator Superfamily NA29_RS04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04110 PF03466 LysR substrate binding domain NA29_RS04120 PF02525 Flavodoxin-like fold NA29_RS04135 PF00324 Amino acid permease NA29_RS04140 PF02469 Fasciclin domain NA29_RS04150 PF04545 Sigma-70, region 4 NA29_RS04150 PF04542 Sigma-70 region 2 NA29_RS04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04160 PF03466 LysR substrate binding domain NA29_RS04165 PF02677 Epoxyqueuosine reductase QueH NA29_RS04175 PF08267 Cobalamin-independent synthase, N-terminal domain NA29_RS04175 PF01717 Cobalamin-independent synthase, Catalytic domain NA29_RS04180 PF01613 Flavin reductase like domain NA29_RS04190 PF01965 DJ-1/PfpI family NA29_RS04195 PF03466 LysR substrate binding domain NA29_RS04195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04205 PF01546 Peptidase family M20/M25/M40 NA29_RS04205 PF07687 Peptidase dimerisation domain NA29_RS04210 PF07690 Major Facilitator Superfamily NA29_RS04225 PF00766 Electron transfer flavoprotein FAD-binding domain NA29_RS04225 PF01012 Electron transfer flavoprotein domain NA29_RS04230 PF01012 Electron transfer flavoprotein domain NA29_RS04235 PF13520 Amino acid permease NA29_RS04245 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS04245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NA29_RS04250 PF00120 Glutamine synthetase, catalytic domain NA29_RS04265 PF13609 Gram-negative porin NA29_RS04270 PF03825 Nucleoside H+ symporter NA29_RS04275 PF01425 Amidase NA29_RS04285 PF13276 HTH-like domain NA29_RS04285 PF13683 Integrase core domain NA29_RS04295 PF07690 Major Facilitator Superfamily NA29_RS04310 PF01380 SIS domain NA29_RS04310 PF01418 Helix-turn-helix domain, rpiR family NA29_RS04315 PF07969 Amidohydrolase family NA29_RS04320 PF01042 Endoribonuclease L-PSP NA29_RS04335 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NA29_RS04335 PF14489 QueF-like protein NA29_RS04345 PF00585 C-terminal regulatory domain of Threonine dehydratase NA29_RS04345 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS04355 PF09335 SNARE associated Golgi protein NA29_RS04360 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NA29_RS04365 PF01799 [2Fe-2S] binding domain NA29_RS04365 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS04375 PF00999 Sodium/hydrogen exchanger family NA29_RS04390 PF01209 ubiE/COQ5 methyltransferase family NA29_RS04405 PF03109 ABC1 family NA29_RS04410 PF05724 Thiopurine S-methyltransferase (TPMT) NA29_RS04430 PF00152 tRNA synthetases class II (D, K and N) NA29_RS04430 PF02938 GAD domain NA29_RS04430 PF01336 OB-fold nucleic acid binding domain NA29_RS04435 PF00293 NUDIX domain NA29_RS04440 PF13091 PLD-like domain NA29_RS04450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS04450 PF12806 Acetyl-CoA dehydrogenase C-terminal like NA29_RS04450 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS04450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS04455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NA29_RS04455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NA29_RS04455 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS04460 PF00108 Thiolase, N-terminal domain NA29_RS04460 PF02803 Thiolase, C-terminal domain NA29_RS04465 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS04470 PF03061 Thioesterase superfamily NA29_RS04475 PF00664 ABC transporter transmembrane region NA29_RS04475 PF00005 ABC transporter NA29_RS04485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NA29_RS04485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NA29_RS04490 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS04500 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS04505 PF00005 ABC transporter NA29_RS04510 PF13230 Glutamine amidotransferases class-II NA29_RS04515 PF01979 Amidohydrolase family NA29_RS04535 PF00572 Ribosomal protein L13 NA29_RS04540 PF00380 Ribosomal protein S9/S16 NA29_RS04545 PF02774 Semialdehyde dehydrogenase, dimerisation domain NA29_RS04545 PF01118 Semialdehyde dehydrogenase, NAD binding domain NA29_RS04550 PF01521 Iron-sulphur cluster biosynthesis NA29_RS04555 PF03702 Anhydro-N-acetylmuramic acid kinase NA29_RS04560 PF01551 Peptidase family M23 NA29_RS04565 PF01479 S4 domain NA29_RS04565 PF00579 tRNA synthetases class I (W and Y) NA29_RS04570 PF02580 D-Tyr-tRNA(Tyr) deacylase NA29_RS04575 PF01161 Phosphatidylethanolamine-binding protein NA29_RS04580 PF00300 Histidine phosphatase superfamily (branch 1) NA29_RS04590 PF05491 RuvB C-terminal winged helix domain NA29_RS04590 PF17864 RuvB AAA lid domain NA29_RS04590 PF05496 Holliday junction DNA helicase RuvB P-loop domain NA29_RS04595 PF02075 Crossover junction endodeoxyribonuclease RuvC NA29_RS04600 PF03653 Uncharacterised protein family (UPF0093) NA29_RS04610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NA29_RS04610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS04615 PF01380 SIS domain NA29_RS04615 PF01418 Helix-turn-helix domain, rpiR family NA29_RS04620 PF00920 Dehydratase family NA29_RS04625 PF01081 KDPG and KHG aldolase NA29_RS04630 PF02447 GntP family permease NA29_RS04640 PF01170 Putative RNA methylase family UPF0020 NA29_RS04640 PF02926 THUMP domain NA29_RS04650 PF01048 Phosphorylase superfamily NA29_RS04655 PF02233 NAD(P) transhydrogenase beta subunit NA29_RS04660 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NA29_RS04665 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NA29_RS04665 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NA29_RS04670 PF00293 NUDIX domain NA29_RS04680 PF01645 Conserved region in glutamate synthase NA29_RS04685 PF12833 Helix-turn-helix domain NA29_RS04705 PF01514 Secretory protein of YscJ/FliF family NA29_RS04740 PF00263 Bacterial type II and III secretion system protein NA29_RS04740 PF03958 Bacterial type II/III secretion system short domain NA29_RS04750 PF00196 Bacterial regulatory proteins, luxR family NA29_RS04750 PF00072 Response regulator receiver domain NA29_RS04760 PF00771 FHIPEP family NA29_RS04765 PF18269 T3SS EscN ATPase C-terminal domain NA29_RS04765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NA29_RS04765 PF02874 ATP synthase alpha/beta family, beta-barrel domain NA29_RS04785 PF00813 FliP family NA29_RS04790 PF01313 Bacterial export proteins, family 3 NA29_RS04795 PF01311 Bacterial export proteins, family 1 NA29_RS04800 PF01312 FlhB HrpN YscU SpaS Family NA29_RS04805 PF01464 Transglycosylase SLT domain NA29_RS04815 PF00206 Lyase NA29_RS04815 PF08328 Adenylosuccinate lyase C-terminal NA29_RS04820 PF01322 Cytochrome C' NA29_RS04835 PF07549 SecD/SecF GG Motif NA29_RS04835 PF02355 Protein export membrane protein NA29_RS04840 PF02355 Protein export membrane protein NA29_RS04840 PF07549 SecD/SecF GG Motif NA29_RS04840 PF13721 SecD export protein N-terminal TM region NA29_RS04845 PF02699 Preprotein translocase subunit NA29_RS04850 PF01702 Queuine tRNA-ribosyltransferase NA29_RS04855 PF02547 Queuosine biosynthesis protein NA29_RS04860 PF17191 RecG wedge domain NA29_RS04860 PF00270 DEAD/DEAH box helicase NA29_RS04860 PF00271 Helicase conserved C-terminal domain NA29_RS04865 PF03466 LysR substrate binding domain NA29_RS04865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS04870 PF06628 Catalase-related immune-responsive NA29_RS04870 PF00199 Catalase NA29_RS04875 PF02581 Thiamine monophosphate synthase NA29_RS04880 PF00210 Ferritin-like domain NA29_RS04885 PF02698 DUF218 domain NA29_RS04890 PF03928 Haem-degrading NA29_RS04895 PF10636 Hemin uptake protein hemP NA29_RS04910 PF02678 Pirin NA29_RS04910 PF05726 Pirin C-terminal cupin domain NA29_RS04915 PF02472 Biopolymer transport protein ExbD/TolR NA29_RS04920 PF01618 MotA/TolQ/ExbB proton channel family NA29_RS04925 PF03544 Gram-negative bacterial TonB protein C-terminal NA29_RS04935 PF01177 Asp/Glu/Hydantoin racemase NA29_RS04940 PF00210 Ferritin-like domain NA29_RS04950 PF03350 Uncharacterized protein family, UPF0114 NA29_RS04960 PF13193 AMP-binding enzyme C-terminal domain NA29_RS04960 PF16177 Acetyl-coenzyme A synthetase N-terminus NA29_RS04960 PF00501 AMP-binding enzyme NA29_RS04970 PF00474 Sodium:solute symporter family NA29_RS04985 PF02469 Fasciclin domain NA29_RS05025 PF00576 HIUase/Transthyretin family NA29_RS05040 PF00005 ABC transporter NA29_RS05045 PF02653 Branched-chain amino acid transport system / permease component NA29_RS05050 PF13458 Periplasmic binding protein NA29_RS05065 PF01613 Flavin reductase like domain NA29_RS05070 PF00083 Sugar (and other) transporter NA29_RS05075 PF02515 CoA-transferase family III NA29_RS05115 PF07969 Amidohydrolase family NA29_RS05120 PF00196 Bacterial regulatory proteins, luxR family NA29_RS05120 PF00072 Response regulator receiver domain NA29_RS05135 PF01618 MotA/TolQ/ExbB proton channel family NA29_RS05140 PF02472 Biopolymer transport protein ExbD/TolR NA29_RS05230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NA29_RS05235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS05235 PF00005 ABC transporter NA29_RS05240 PF00005 ABC transporter NA29_RS05240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS05245 PF12911 N-terminal TM domain of oligopeptide transport permease C NA29_RS05245 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS05250 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS05255 PF13454 FAD-NAD(P)-binding NA29_RS05260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS05260 PF03466 LysR substrate binding domain NA29_RS05265 PF07733 Bacterial DNA polymerase III alpha NTPase domain NA29_RS05265 PF02811 PHP domain NA29_RS05265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NA29_RS05265 PF11490 DNA polymerase III polC-type N-terminus II NA29_RS05265 PF14579 Helix-hairpin-helix motif NA29_RS05265 PF14480 DNA polymerase III polC-type N-terminus I NA29_RS05265 PF00929 Exonuclease NA29_RS05280 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS05280 PF08448 PAS fold NA29_RS05290 PF00392 Bacterial regulatory proteins, gntR family NA29_RS05290 PF07729 FCD domain NA29_RS05300 PF00561 alpha/beta hydrolase fold NA29_RS05325 PF01799 [2Fe-2S] binding domain NA29_RS05325 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS05330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS05330 PF00034 Cytochrome c NA29_RS05345 PF01625 Peptide methionine sulfoxide reductase NA29_RS05350 PF00578 AhpC/TSA family NA29_RS05350 PF17991 Thioredoxin like C-terminal domain NA29_RS05350 PF02683 Cytochrome C biogenesis protein transmembrane region NA29_RS05355 PF01641 SelR domain NA29_RS05360 PF00486 Transcriptional regulatory protein, C terminal NA29_RS05360 PF00072 Response regulator receiver domain NA29_RS05365 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS05365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS05365 PF07689 KaiB domain NA29_RS05375 PF00939 Sodium:sulfate symporter transmembrane region NA29_RS05385 PF05958 tRNA (Uracil-5-)-methyltransferase NA29_RS05400 PF00171 Aldehyde dehydrogenase family NA29_RS05405 PF00202 Aminotransferase class-III NA29_RS05410 PF00202 Aminotransferase class-III NA29_RS05415 PF00171 Aldehyde dehydrogenase family NA29_RS05420 PF01037 Lrp/AsnC ligand binding domain NA29_RS05425 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NA29_RS05430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS05445 PF01613 Flavin reductase like domain NA29_RS05450 PF00171 Aldehyde dehydrogenase family NA29_RS05455 PF00296 Luciferase-like monooxygenase NA29_RS05460 PF00561 alpha/beta hydrolase fold NA29_RS05470 PF00005 ABC transporter NA29_RS05470 PF00571 CBS domain NA29_RS05475 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS05480 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NA29_RS05490 PF00166 Chaperonin 10 Kd subunit NA29_RS05495 PF00118 TCP-1/cpn60 chaperonin family NA29_RS05500 PF03466 LysR substrate binding domain NA29_RS05500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS05510 PF01047 MarR family NA29_RS05515 PF00892 EamA-like transporter family NA29_RS05520 PF01967 MoaC family NA29_RS05525 PF01435 Peptidase family M48 NA29_RS05535 PF00561 alpha/beta hydrolase fold NA29_RS05545 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NA29_RS05565 PF00162 Phosphoglycerate kinase NA29_RS05570 PF00224 Pyruvate kinase, barrel domain NA29_RS05570 PF02887 Pyruvate kinase, alpha/beta domain NA29_RS05575 PF01116 Fructose-bisphosphate aldolase class-II NA29_RS05590 PF01259 SAICAR synthetase NA29_RS05595 PF00731 AIR carboxylase NA29_RS05600 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NA29_RS05600 PF02222 ATP-grasp domain NA29_RS05605 PF01300 Telomere recombination NA29_RS05605 PF03481 Putative GTP-binding controlling metal-binding NA29_RS05610 PF04116 Fatty acid hydroxylase superfamily NA29_RS05615 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NA29_RS05620 PF00072 Response regulator receiver domain NA29_RS05620 PF00486 Transcriptional regulatory protein, C terminal NA29_RS05625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS05625 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS05635 PF13180 PDZ domain NA29_RS05645 PF02625 XdhC and CoxI family NA29_RS05645 PF13478 XdhC Rossmann domain NA29_RS05655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS05655 PF03459 TOBE domain NA29_RS05660 PF01292 Prokaryotic cytochrome b561 NA29_RS05665 PF00174 Oxidoreductase molybdopterin binding domain NA29_RS05675 PF00005 ABC transporter NA29_RS05675 PF03459 TOBE domain NA29_RS05680 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS05690 PF08361 MAATS-type transcriptional repressor, C-terminal region NA29_RS05690 PF00440 Bacterial regulatory proteins, tetR family NA29_RS05695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NA29_RS05695 PF00529 HlyD membrane-fusion protein of T1SS NA29_RS05700 PF00873 AcrB/AcrD/AcrF family NA29_RS05705 PF02321 Outer membrane efflux protein NA29_RS05745 PF05957 Bacterial protein of unknown function (DUF883) NA29_RS05750 PF00578 AhpC/TSA family NA29_RS05750 PF10417 C-terminal domain of 1-Cys peroxiredoxin NA29_RS05755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS05755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS05755 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS05765 PF03301 Tryptophan 2,3-dioxygenase NA29_RS05770 PF00266 Aminotransferase class-V NA29_RS05775 PF04199 Putative cyclase NA29_RS05785 PF01613 Flavin reductase like domain NA29_RS05795 PF12697 Alpha/beta hydrolase family NA29_RS05800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS05800 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS05800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS05805 PF00501 AMP-binding enzyme NA29_RS05805 PF13193 AMP-binding enzyme C-terminal domain NA29_RS05815 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS05820 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS05825 PF00005 ABC transporter NA29_RS05830 PF00491 Arginase family NA29_RS05835 PF01625 Peptide methionine sulfoxide reductase NA29_RS05850 PF07690 Major Facilitator Superfamily NA29_RS05855 PF12241 Trans-2-enoyl-CoA reductase catalytic region NA29_RS05855 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NA29_RS05855 PF07055 Enoyl reductase FAD binding domain NA29_RS05870 PF01243 Pyridoxamine 5'-phosphate oxidase NA29_RS05870 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NA29_RS05875 PF05170 AsmA family NA29_RS05880 PF00899 ThiF family NA29_RS05885 PF00501 AMP-binding enzyme NA29_RS05885 PF13193 AMP-binding enzyme C-terminal domain NA29_RS05905 PF07690 Major Facilitator Superfamily NA29_RS05910 PF13533 Biotin-lipoyl like NA29_RS05915 PF17933 Tetracyclin repressor-like, C-terminal domain NA29_RS05915 PF00440 Bacterial regulatory proteins, tetR family NA29_RS05920 PF00324 Amino acid permease NA29_RS05925 PF13609 Gram-negative porin NA29_RS05930 PF01037 Lrp/AsnC ligand binding domain NA29_RS05935 PF01070 FMN-dependent dehydrogenase NA29_RS05940 PF07927 HicA toxin of bacterial toxin-antitoxin, NA29_RS05945 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system NA29_RS05945 PF01381 Helix-turn-helix NA29_RS05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS05955 PF03466 LysR substrate binding domain NA29_RS05960 PF07690 Major Facilitator Superfamily NA29_RS05970 PF01425 Amidase NA29_RS05995 PF00005 ABC transporter NA29_RS06005 PF09084 NMT1/THI5 like NA29_RS06010 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS06015 PF00296 Luciferase-like monooxygenase NA29_RS06020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS06020 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS06020 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS06025 PF05995 Cysteine dioxygenase type I NA29_RS06030 PF00581 Rhodanese-like domain NA29_RS06045 PF03212 Pertactin NA29_RS06045 PF03797 Autotransporter beta-domain NA29_RS06045 PF13018 Extended Signal Peptide of Type V secretion system NA29_RS06045 PF16168 Adhesin of bacterial autotransporter system, probable stalk NA29_RS06050 PF03797 Autotransporter beta-domain NA29_RS06050 PF13018 Extended Signal Peptide of Type V secretion system NA29_RS06050 PF03212 Pertactin NA29_RS06050 PF16168 Adhesin of bacterial autotransporter system, probable stalk NA29_RS06085 PF02368 Bacterial Ig-like domain (group 2) NA29_RS06085 PF02369 Bacterial Ig-like domain (group 1) NA29_RS06085 PF11924 Inverse autotransporter, beta-domain NA29_RS06085 PF07979 Intimin C-type lectin domain NA29_RS06085 PF01476 LysM domain NA29_RS06100 PF00765 Autoinducer synthase NA29_RS06105 PF03472 Autoinducer binding domain NA29_RS06105 PF00196 Bacterial regulatory proteins, luxR family NA29_RS06115 PF00465 Iron-containing alcohol dehydrogenase NA29_RS06120 PF00005 ABC transporter NA29_RS06125 PF09383 NIL domain NA29_RS06125 PF00005 ABC transporter NA29_RS06135 PF02653 Branched-chain amino acid transport system / permease component NA29_RS06145 PF00171 Aldehyde dehydrogenase family NA29_RS06150 PF01614 Bacterial transcriptional regulator NA29_RS06150 PF09339 IclR helix-turn-helix domain NA29_RS06165 PF00392 Bacterial regulatory proteins, gntR family NA29_RS06165 PF07729 FCD domain NA29_RS06170 PF00266 Aminotransferase class-V NA29_RS06175 PF07690 Major Facilitator Superfamily NA29_RS06180 PF01565 FAD binding domain NA29_RS06180 PF13183 4Fe-4S dicluster domain NA29_RS06180 PF02913 FAD linked oxidases, C-terminal domain NA29_RS06185 PF01168 Alanine racemase, N-terminal domain NA29_RS06185 PF14031 Putative serine dehydratase domain NA29_RS06210 PF00892 EamA-like transporter family NA29_RS06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06240 PF03459 TOBE domain NA29_RS06245 PF04891 NifQ NA29_RS06265 PF00583 Acetyltransferase (GNAT) family NA29_RS06280 PF01061 ABC-2 type transporter NA29_RS06285 PF00005 ABC transporter NA29_RS06300 PF03466 LysR substrate binding domain NA29_RS06300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06315 PF01037 Lrp/AsnC ligand binding domain NA29_RS06320 PF07715 TonB-dependent Receptor Plug Domain NA29_RS06320 PF00593 TonB dependent receptor NA29_RS06330 PF02566 OsmC-like protein NA29_RS06340 PF04102 SlyX NA29_RS06345 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NA29_RS06355 PF07690 Major Facilitator Superfamily NA29_RS06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06360 PF03466 LysR substrate binding domain NA29_RS06365 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS06365 PF13185 GAF domain NA29_RS06365 PF00563 EAL domain NA29_RS06370 PF01037 Lrp/AsnC ligand binding domain NA29_RS06375 PF01810 LysE type translocator NA29_RS06380 PF06481 COX Aromatic Rich Motif NA29_RS06380 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NA29_RS06385 PF00115 Cytochrome C and Quinol oxidase polypeptide I NA29_RS06390 PF00510 Cytochrome c oxidase subunit III NA29_RS06400 PF00905 Penicillin binding protein transpeptidase domain NA29_RS06400 PF03717 Penicillin-binding Protein dimerisation domain NA29_RS06410 PF01810 LysE type translocator NA29_RS06430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06430 PF03466 LysR substrate binding domain NA29_RS06435 PF00578 AhpC/TSA family NA29_RS06440 PF01841 Transglutaminase-like superfamily NA29_RS06445 PF02769 AIR synthase related protein, C-terminal domain NA29_RS06445 PF00586 AIR synthase related protein, N-terminal domain NA29_RS06450 PF00561 alpha/beta hydrolase fold NA29_RS06455 PF13193 AMP-binding enzyme C-terminal domain NA29_RS06455 PF00501 AMP-binding enzyme NA29_RS06460 PF00171 Aldehyde dehydrogenase family NA29_RS06470 PF01202 Shikimate kinase NA29_RS06475 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS06485 PF00175 Oxidoreductase NAD-binding domain NA29_RS06485 PF00037 4Fe-4S binding domain NA29_RS06485 PF00970 Oxidoreductase FAD-binding domain NA29_RS06490 PF01965 DJ-1/PfpI family NA29_RS06500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06500 PF03466 LysR substrate binding domain NA29_RS06505 PF00107 Zinc-binding dehydrogenase NA29_RS06505 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS06510 PF00464 Serine hydroxymethyltransferase NA29_RS06515 PF03477 ATP cone domain NA29_RS06535 PF13609 Gram-negative porin NA29_RS06540 PF03466 LysR substrate binding domain NA29_RS06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NA29_RS06550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NA29_RS06555 PF00171 Aldehyde dehydrogenase family NA29_RS06585 PF03466 LysR substrate binding domain NA29_RS06585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06595 PF00005 ABC transporter NA29_RS06600 PF00005 ABC transporter NA29_RS06600 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS06610 PF02653 Branched-chain amino acid transport system / permease component NA29_RS06630 PF06052 3-hydroxyanthranilic acid dioxygenase NA29_RS06635 PF01042 Endoribonuclease L-PSP NA29_RS06640 PF00171 Aldehyde dehydrogenase family NA29_RS06655 PF00356 Bacterial regulatory proteins, lacI family NA29_RS06665 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS06670 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS06675 PF00005 ABC transporter NA29_RS06675 PF08402 TOBE domain NA29_RS06680 PF00149 Calcineurin-like phosphoesterase NA29_RS06685 PF00175 Oxidoreductase NAD-binding domain NA29_RS06685 PF00042 Globin NA29_RS06685 PF00970 Oxidoreductase FAD-binding domain NA29_RS06710 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NA29_RS06715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NA29_RS06715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NA29_RS06720 PF03466 LysR substrate binding domain NA29_RS06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06725 PF00330 Aconitase family (aconitate hydratase) NA29_RS06730 PF00083 Sugar (and other) transporter NA29_RS06735 PF03848 Tellurite resistance protein TehB NA29_RS06740 PF03466 LysR substrate binding domain NA29_RS06740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06750 PF11940 Domain of unknown function (DUF3458) Ig-like fold NA29_RS06750 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NA29_RS06750 PF01433 Peptidase family M1 domain NA29_RS06760 PF01169 Uncharacterized protein family UPF0016 NA29_RS06765 PF01979 Amidohydrolase family NA29_RS06770 PF00860 Permease family NA29_RS06775 PF00962 Adenosine/AMP deaminase NA29_RS06785 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NA29_RS06785 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS06790 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS06790 PF01799 [2Fe-2S] binding domain NA29_RS06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06795 PF03466 LysR substrate binding domain NA29_RS06800 PF02600 Disulfide bond formation protein DsbB NA29_RS06805 PF01425 Amidase NA29_RS06820 PF02254 TrkA-N domain NA29_RS06820 PF00999 Sodium/hydrogen exchanger family NA29_RS06830 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NA29_RS06835 PF00403 Heavy-metal-associated domain NA29_RS06840 PF00403 Heavy-metal-associated domain NA29_RS06845 PF03372 Endonuclease/Exonuclease/phosphatase family NA29_RS06850 PF00376 MerR family regulatory protein NA29_RS06850 PF09278 MerR, DNA binding NA29_RS06860 PF00593 TonB dependent receptor NA29_RS06860 PF07715 TonB-dependent Receptor Plug Domain NA29_RS06870 PF05643 Putative bacterial lipoprotein (DUF799) NA29_RS06880 PF03783 Curli production assembly/transport component CsgG NA29_RS06905 PF07733 Bacterial DNA polymerase III alpha NTPase domain NA29_RS06905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NA29_RS06905 PF02811 PHP domain NA29_RS06905 PF14579 Helix-hairpin-helix motif NA29_RS06910 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB NA29_RS06930 PF03707 Bacterial signalling protein N terminal repeat NA29_RS06930 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS06930 PF00563 EAL domain NA29_RS06935 PF01177 Asp/Glu/Hydantoin racemase NA29_RS06940 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS06945 PF01266 FAD dependent oxidoreductase NA29_RS06950 PF03466 LysR substrate binding domain NA29_RS06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS06960 PF00270 DEAD/DEAH box helicase NA29_RS06960 PF03880 DbpA RNA binding domain NA29_RS06960 PF00271 Helicase conserved C-terminal domain NA29_RS06965 PF05088 Bacterial NAD-glutamate dehydrogenase NA29_RS06970 PF07690 Major Facilitator Superfamily NA29_RS06980 PF00392 Bacterial regulatory proteins, gntR family NA29_RS06980 PF00155 Aminotransferase class I and II NA29_RS06990 PF00860 Permease family NA29_RS06995 PF13609 Gram-negative porin NA29_RS07010 PF02690 Na+/Pi-cotransporter NA29_RS07015 PF07690 Major Facilitator Superfamily NA29_RS07020 PF07690 Major Facilitator Superfamily NA29_RS07025 PF03971 Monomeric isocitrate dehydrogenase NA29_RS07050 PF00929 Exonuclease NA29_RS07055 PF00075 RNase H NA29_RS07065 PF00753 Metallo-beta-lactamase superfamily NA29_RS07065 PF16123 Hydroxyacylglutathione hydrolase C-terminus NA29_RS07070 PF01476 LysM domain NA29_RS07070 PF01464 Transglycosylase SLT domain NA29_RS07095 PF00005 ABC transporter NA29_RS07095 PF00664 ABC transporter transmembrane region NA29_RS07100 PF16177 Acetyl-coenzyme A synthetase N-terminus NA29_RS07100 PF00501 AMP-binding enzyme NA29_RS07100 PF13193 AMP-binding enzyme C-terminal domain NA29_RS07105 PF07690 Major Facilitator Superfamily NA29_RS07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07110 PF03466 LysR substrate binding domain NA29_RS07120 PF08946 Osmosensory transporter coiled coil NA29_RS07120 PF00083 Sugar (and other) transporter NA29_RS07165 PF05860 haemagglutination activity domain NA29_RS07165 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain NA29_RS07165 PF13332 Hemagglutinin repeat NA29_RS07165 PF05594 Haemagluttinin repeat NA29_RS07165 PF13018 Extended Signal Peptide of Type V secretion system NA29_RS07170 PF05860 haemagglutination activity domain NA29_RS07170 PF04829 Pre-toxin domain with VENN motif NA29_RS07170 PF13018 Extended Signal Peptide of Type V secretion system NA29_RS07170 PF13332 Hemagglutinin repeat NA29_RS07175 PF17287 POTRA domain NA29_RS07175 PF08479 POTRA domain, ShlB-type NA29_RS07175 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NA29_RS07180 PF01494 FAD binding domain NA29_RS07185 PF00106 short chain dehydrogenase NA29_RS07190 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS07195 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS07195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS07195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS07200 PF13193 AMP-binding enzyme C-terminal domain NA29_RS07200 PF00501 AMP-binding enzyme NA29_RS07215 PF04115 Ureidoglycolate lyase NA29_RS07220 PF03561 Allantoicase repeat NA29_RS07225 PF00375 Sodium:dicarboxylate symporter family NA29_RS07235 PF01204 Trehalase NA29_RS07240 PF00392 Bacterial regulatory proteins, gntR family NA29_RS07240 PF07729 FCD domain NA29_RS07245 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NA29_RS07245 PF00117 Glutamine amidotransferase class-I NA29_RS07250 PF01810 LysE type translocator NA29_RS07255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NA29_RS07255 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NA29_RS07255 PF02142 MGS-like domain NA29_RS07260 PF01272 Transcription elongation factor, GreA/GreB, C-term NA29_RS07260 PF03449 Transcription elongation factor, N-terminal NA29_RS07270 PF01985 CRS1 / YhbY (CRM) domain NA29_RS07275 PF01728 FtsJ-like methyltransferase NA29_RS07280 PF01434 Peptidase family M41 NA29_RS07280 PF06480 FtsH Extracellular NA29_RS07280 PF17862 AAA+ lid domain NA29_RS07280 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS07285 PF00809 Pterin binding enzyme NA29_RS07290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NA29_RS07290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NA29_RS07290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NA29_RS07290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NA29_RS07295 PF12849 PBP superfamily domain NA29_RS07300 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS07305 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS07310 PF00005 ABC transporter NA29_RS07315 PF01895 PhoU domain NA29_RS07320 PF00072 Response regulator receiver domain NA29_RS07320 PF00486 Transcriptional regulatory protein, C terminal NA29_RS07325 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS07325 PF00989 PAS fold NA29_RS07325 PF11808 Phosphate regulon sensor protein PhoR NA29_RS07325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS07330 PF17941 Polyphosphate kinase C-terminal domain 1 NA29_RS07330 PF02503 Polyphosphate kinase middle domain NA29_RS07330 PF13090 Polyphosphate kinase C-terminal domain 2 NA29_RS07330 PF13089 Polyphosphate kinase N-terminal domain NA29_RS07335 PF02541 Ppx/GppA phosphatase family NA29_RS07345 PF00300 Histidine phosphatase superfamily (branch 1) NA29_RS07360 PF01527 Transposase NA29_RS07365 PF13683 Integrase core domain NA29_RS07365 PF13276 HTH-like domain NA29_RS07375 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH NA29_RS07390 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS07395 PF00005 ABC transporter NA29_RS07405 PF12802 MarR family NA29_RS07410 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NA29_RS07410 PF00034 Cytochrome c NA29_RS07410 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS07415 PF00857 Isochorismatase family NA29_RS07425 PF00561 alpha/beta hydrolase fold NA29_RS07430 PF17645 Arylmalonate decarboxylase NA29_RS07435 PF01494 FAD binding domain NA29_RS07440 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS07440 PF01799 [2Fe-2S] binding domain NA29_RS07445 PF00034 Cytochrome c NA29_RS07445 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NA29_RS07445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS07450 PF07690 Major Facilitator Superfamily NA29_RS07455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NA29_RS07455 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NA29_RS07460 PF00591 Glycosyl transferase family, a/b domain NA29_RS07460 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NA29_RS07465 PF00171 Aldehyde dehydrogenase family NA29_RS07470 PF02558 Ketopantoate reductase PanE/ApbA NA29_RS07470 PF08546 Ketopantoate reductase PanE/ApbA C terminal NA29_RS07480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS07480 PF03466 LysR substrate binding domain NA29_RS07500 PF00449 Urease alpha-subunit, N-terminal domain NA29_RS07500 PF01979 Amidohydrolase family NA29_RS07505 PF07683 Cobalamin synthesis protein cobW C-terminal domain NA29_RS07505 PF02492 CobW/HypB/UreG, nucleotide-binding domain NA29_RS07510 PF02653 Branched-chain amino acid transport system / permease component NA29_RS07515 PF02653 Branched-chain amino acid transport system / permease component NA29_RS07515 PF11862 Domain of unknown function (DUF3382) NA29_RS07520 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS07520 PF00005 ABC transporter NA29_RS07525 PF00005 ABC transporter NA29_RS07530 PF13458 Periplasmic binding protein NA29_RS07535 PF08946 Osmosensory transporter coiled coil NA29_RS07535 PF00083 Sugar (and other) transporter NA29_RS07540 PF00202 Aminotransferase class-III NA29_RS07555 PF00171 Aldehyde dehydrogenase family NA29_RS07565 PF02913 FAD linked oxidases, C-terminal domain NA29_RS07565 PF01565 FAD binding domain NA29_RS07570 PF12792 CSS motif domain associated with EAL NA29_RS07570 PF00563 EAL domain NA29_RS07575 PF00392 Bacterial regulatory proteins, gntR family NA29_RS07575 PF07729 FCD domain NA29_RS07585 PF00005 ABC transporter NA29_RS07590 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS07600 PF02615 Malate/L-lactate dehydrogenase NA29_RS07605 PF01042 Endoribonuclease L-PSP NA29_RS07610 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS07625 PF01425 Amidase NA29_RS07630 PF07690 Major Facilitator Superfamily NA29_RS07640 PF00171 Aldehyde dehydrogenase family NA29_RS07645 PF03928 Haem-degrading NA29_RS07650 PF00175 Oxidoreductase NAD-binding domain NA29_RS07660 PF00970 Oxidoreductase FAD-binding domain NA29_RS07660 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS07660 PF00175 Oxidoreductase NAD-binding domain NA29_RS07665 PF07859 alpha/beta hydrolase fold NA29_RS07670 PF00392 Bacterial regulatory proteins, gntR family NA29_RS07670 PF07729 FCD domain NA29_RS07675 PF01297 Zinc-uptake complex component A periplasmic NA29_RS07680 PF01979 Amidohydrolase family NA29_RS07690 PF07690 Major Facilitator Superfamily NA29_RS07710 PF00924 Mechanosensitive ion channel NA29_RS07720 PF13609 Gram-negative porin NA29_RS07725 PF01165 Ribosomal protein S21 NA29_RS07760 PF13609 Gram-negative porin NA29_RS07765 PF07702 UTRA domain NA29_RS07765 PF00392 Bacterial regulatory proteins, gntR family NA29_RS07770 PF13458 Periplasmic binding protein NA29_RS07775 PF02653 Branched-chain amino acid transport system / permease component NA29_RS07780 PF11862 Domain of unknown function (DUF3382) NA29_RS07780 PF02653 Branched-chain amino acid transport system / permease component NA29_RS07785 PF00005 ABC transporter NA29_RS07785 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS07790 PF00005 ABC transporter NA29_RS07795 PF00330 Aconitase family (aconitate hydratase) NA29_RS07800 PF00694 Aconitase C-terminal domain NA29_RS07805 PF02538 Hydantoinase B/oxoprolinase NA29_RS07810 PF05378 Hydantoinase/oxoprolinase N-terminal region NA29_RS07810 PF01968 Hydantoinase/oxoprolinase NA29_RS07815 PF00857 Isochorismatase family NA29_RS07830 PF02515 CoA-transferase family III NA29_RS07835 PF02272 DHHA1 domain NA29_RS07835 PF01411 tRNA synthetases class II (A) NA29_RS07835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NA29_RS07840 PF06779 Uncharacterised MFS-type transporter YbfB NA29_RS07845 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS07850 PF01361 Tautomerase enzyme NA29_RS07855 PF01212 Beta-eliminating lyase NA29_RS07860 PF00654 Voltage gated chloride channel NA29_RS07865 PF13344 Haloacid dehalogenase-like hydrolase NA29_RS07865 PF00293 NUDIX domain NA29_RS07870 PF01206 Sulfurtransferase TusA NA29_RS07875 PF00483 Nucleotidyl transferase NA29_RS07880 PF08264 Anticodon-binding domain of tRNA NA29_RS07880 PF00133 tRNA synthetases class I (I, L, M and V) NA29_RS07880 PF10458 Valyl tRNA synthetase tRNA binding arm NA29_RS07885 PF13361 UvrD-like helicase C-terminal domain NA29_RS07885 PF00580 UvrD/REP helicase N-terminal domain NA29_RS07895 PF01636 Phosphotransferase enzyme family NA29_RS07905 PF04143 Sulphur transport NA29_RS07910 PF03641 Possible lysine decarboxylase NA29_RS07915 PF01367 5'-3' exonuclease, C-terminal SAM fold NA29_RS07915 PF00476 DNA polymerase family A NA29_RS07915 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NA29_RS07915 PF01612 3'-5' exonuclease NA29_RS07920 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS07925 PF01738 Dienelactone hydrolase family NA29_RS07935 PF00581 Rhodanese-like domain NA29_RS07950 PF02609 Exonuclease VII small subunit NA29_RS07955 PF00348 Polyprenyl synthetase NA29_RS07960 PF02780 Transketolase, C-terminal domain NA29_RS07960 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NA29_RS07960 PF02779 Transketolase, pyrimidine binding domain NA29_RS07965 PF02649 Type I GTP cyclohydrolase folE2 NA29_RS07970 PF00814 Glycoprotease family NA29_RS07980 PF09424 Yqey-like protein NA29_RS07985 PF01807 CHC2 zinc finger NA29_RS07985 PF08278 DNA primase DnaG DnaB-binding NA29_RS07985 PF10410 DnaB-helicase binding domain of primase NA29_RS07985 PF08275 DNA primase catalytic core, N-terminal domain NA29_RS07990 PF04546 Sigma-70, non-essential region NA29_RS07990 PF04545 Sigma-70, region 4 NA29_RS07990 PF04539 Sigma-70 region 3 NA29_RS07990 PF04542 Sigma-70 region 2 NA29_RS07990 PF00140 Sigma-70 factor, region 1.2 NA29_RS07990 PF03979 Sigma-70 factor, region 1.1 NA29_RS08000 PF04371 Porphyromonas-type peptidyl-arginine deiminase NA29_RS08005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08005 PF03466 LysR substrate binding domain NA29_RS08015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08015 PF03466 LysR substrate binding domain NA29_RS08025 PF08281 Sigma-70, region 4 NA29_RS08025 PF04542 Sigma-70 region 2 NA29_RS08025 PF12680 SnoaL-like domain NA29_RS08035 PF02203 Tar ligand binding domain homologue NA29_RS08035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS08035 PF00672 HAMP domain NA29_RS08045 PF00672 HAMP domain NA29_RS08045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS08045 PF02203 Tar ligand binding domain homologue NA29_RS08050 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NA29_RS08050 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NA29_RS08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08055 PF03466 LysR substrate binding domain NA29_RS08065 PF12792 CSS motif domain associated with EAL NA29_RS08065 PF00563 EAL domain NA29_RS08080 PF07690 Major Facilitator Superfamily NA29_RS08085 PF07690 Major Facilitator Superfamily NA29_RS08090 PF00067 Cytochrome P450 NA29_RS08105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NA29_RS08110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NA29_RS08110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NA29_RS08115 PF00920 Dehydratase family NA29_RS08125 PF07690 Major Facilitator Superfamily NA29_RS08130 PF03466 LysR substrate binding domain NA29_RS08130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08135 PF00106 short chain dehydrogenase NA29_RS08140 PF01965 DJ-1/PfpI family NA29_RS08140 PF12833 Helix-turn-helix domain NA29_RS08150 PF03180 NLPA lipoprotein NA29_RS08155 PF06506 Propionate catabolism activator NA29_RS08155 PF00158 Sigma-54 interaction domain NA29_RS08155 PF02954 Bacterial regulatory protein, Fis family NA29_RS08165 PF00285 Citrate synthase, C-terminal domain NA29_RS08170 PF00330 Aconitase family (aconitate hydratase) NA29_RS08170 PF00694 Aconitase C-terminal domain NA29_RS08175 PF04303 PrpF protein NA29_RS08180 PF03972 MmgE/PrpD family NA29_RS08190 PF07690 Major Facilitator Superfamily NA29_RS08195 PF03466 LysR substrate binding domain NA29_RS08195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08200 PF02595 Glycerate kinase family NA29_RS08210 PF08220 DeoR-like helix-turn-helix domain NA29_RS08210 PF00455 DeoR C terminal sensor domain NA29_RS08215 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NA29_RS08215 PF01266 FAD dependent oxidoreductase NA29_RS08220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NA29_RS08220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NA29_RS08225 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS08235 PF03466 LysR substrate binding domain NA29_RS08235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08240 PF02321 Outer membrane efflux protein NA29_RS08250 PF00005 ABC transporter NA29_RS08255 PF13533 Biotin-lipoyl like NA29_RS08260 PF01227 GTP cyclohydrolase I NA29_RS08270 PF02322 Cytochrome bd terminal oxidase subunit II NA29_RS08275 PF01654 Cytochrome bd terminal oxidase subunit I NA29_RS08295 PF07690 Major Facilitator Superfamily NA29_RS08300 PF03466 LysR substrate binding domain NA29_RS08300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08305 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS08315 PF01292 Prokaryotic cytochrome b561 NA29_RS08330 PF00581 Rhodanese-like domain NA29_RS08355 PF03069 Acetamidase/Formamidase family NA29_RS08365 PF04542 Sigma-70 region 2 NA29_RS08365 PF08281 Sigma-70, region 4 NA29_RS08370 PF00199 Catalase NA29_RS08380 PF01464 Transglycosylase SLT domain NA29_RS08390 PF07963 Prokaryotic N-terminal methylation motif NA29_RS08390 PF08334 Type II secretion system (T2SS), protein G NA29_RS08395 PF07963 Prokaryotic N-terminal methylation motif NA29_RS08395 PF08334 Type II secretion system (T2SS), protein G NA29_RS08400 PF03958 Bacterial type II/III secretion system short domain NA29_RS08400 PF00263 Bacterial type II and III secretion system protein NA29_RS08425 PF00437 Type II/IV secretion system protein NA29_RS08430 PF00482 Type II secretion system (T2SS), protein F NA29_RS08435 PF08334 Type II secretion system (T2SS), protein G NA29_RS08435 PF07963 Prokaryotic N-terminal methylation motif NA29_RS08440 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NA29_RS08440 PF02837 Glycosyl hydrolases family 2, sugar binding domain NA29_RS08440 PF00703 Glycosyl hydrolases family 2 NA29_RS08440 PF16355 Domain of unknown function (DUF4982) NA29_RS08440 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NA29_RS08445 PF08281 Sigma-70, region 4 NA29_RS08445 PF04542 Sigma-70 region 2 NA29_RS08455 PF00067 Cytochrome P450 NA29_RS08465 PF00486 Transcriptional regulatory protein, C terminal NA29_RS08465 PF00072 Response regulator receiver domain NA29_RS08470 PF03466 LysR substrate binding domain NA29_RS08470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS08480 PF08402 TOBE domain NA29_RS08480 PF00005 ABC transporter NA29_RS08485 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS08490 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS08495 PF01266 FAD dependent oxidoreductase NA29_RS08505 PF04324 BFD-like [2Fe-2S] binding domain NA29_RS08505 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS08515 PF00989 PAS fold NA29_RS08515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS08515 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS08520 PF00196 Bacterial regulatory proteins, luxR family NA29_RS08520 PF00072 Response regulator receiver domain NA29_RS08530 PF17158 Membrane-associated sensor, integral membrane domain NA29_RS08530 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS08545 PF03621 MbtH-like protein NA29_RS08550 PF00975 Thioesterase domain NA29_RS08560 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NA29_RS08565 PF00005 ABC transporter NA29_RS08565 PF00664 ABC transporter transmembrane region NA29_RS08570 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NA29_RS08575 PF13193 AMP-binding enzyme C-terminal domain NA29_RS08575 PF00550 Phosphopantetheine attachment site NA29_RS08575 PF00501 AMP-binding enzyme NA29_RS08575 PF00668 Condensation domain NA29_RS08580 PF00550 Phosphopantetheine attachment site NA29_RS08580 PF00668 Condensation domain NA29_RS08580 PF13193 AMP-binding enzyme C-terminal domain NA29_RS08580 PF00501 AMP-binding enzyme NA29_RS08585 PF00501 AMP-binding enzyme NA29_RS08585 PF13193 AMP-binding enzyme C-terminal domain NA29_RS08585 PF00550 Phosphopantetheine attachment site NA29_RS08585 PF07993 Male sterility protein NA29_RS08585 PF00668 Condensation domain NA29_RS08590 PF00593 TonB dependent receptor NA29_RS08590 PF07715 TonB-dependent Receptor Plug Domain NA29_RS08595 PF01804 Penicillin amidase NA29_RS08600 PF00005 ABC transporter NA29_RS08605 PF01032 FecCD transport family NA29_RS08610 PF01497 Periplasmic binding protein NA29_RS08645 PF00501 AMP-binding enzyme NA29_RS08650 PF00005 ABC transporter NA29_RS08650 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS08655 PF02653 Branched-chain amino acid transport system / permease component NA29_RS08670 PF00005 ABC transporter NA29_RS08680 PF07690 Major Facilitator Superfamily NA29_RS08685 PF00440 Bacterial regulatory proteins, tetR family NA29_RS08685 PF18665 Tetracyclin repressor-like, C-terminal domain NA29_RS08690 PF02811 PHP domain NA29_RS08690 PF00929 Exonuclease NA29_RS08690 PF11490 DNA polymerase III polC-type N-terminus II NA29_RS08690 PF14480 DNA polymerase III polC-type N-terminus I NA29_RS08690 PF14579 Helix-hairpin-helix motif NA29_RS08690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NA29_RS08690 PF07733 Bacterial DNA polymerase III alpha NTPase domain NA29_RS08695 PF00330 Aconitase family (aconitate hydratase) NA29_RS08695 PF06434 Aconitate hydratase 2 N-terminus NA29_RS08695 PF11791 Aconitate B N-terminal domain NA29_RS08700 PF12833 Helix-turn-helix domain NA29_RS08705 PF00083 Sugar (and other) transporter NA29_RS08705 PF08946 Osmosensory transporter coiled coil NA29_RS08710 PF02910 Fumarate reductase flavoprotein C-term NA29_RS08710 PF00890 FAD binding domain NA29_RS08720 PF02754 Cysteine-rich domain NA29_RS08725 PF00072 Response regulator receiver domain NA29_RS08725 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS08730 PF01627 Hpt domain NA29_RS08730 PF00072 Response regulator receiver domain NA29_RS08730 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS08730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS08740 PF11862 Domain of unknown function (DUF3382) NA29_RS08740 PF02653 Branched-chain amino acid transport system / permease component NA29_RS08750 PF00005 ABC transporter NA29_RS08750 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS08755 PF00005 ABC transporter NA29_RS08765 PF09723 Zinc ribbon domain NA29_RS08770 PF00795 Carbon-nitrogen hydrolase NA29_RS08790 PF00355 Rieske [2Fe-2S] domain NA29_RS08795 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS08795 PF14759 Reductase C-terminal NA29_RS08800 PF00355 Rieske [2Fe-2S] domain NA29_RS08800 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NA29_RS08805 PF13577 SnoaL-like domain NA29_RS08810 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS08810 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NA29_RS08815 PF03450 CO dehydrogenase flavoprotein C-terminal domain NA29_RS08815 PF00941 FAD binding domain in molybdopterin dehydrogenase NA29_RS08820 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS08820 PF01799 [2Fe-2S] binding domain NA29_RS08830 PF17645 Arylmalonate decarboxylase NA29_RS08835 PF00561 alpha/beta hydrolase fold NA29_RS08845 PF00857 Isochorismatase family NA29_RS08850 PF00083 Sugar (and other) transporter NA29_RS08850 PF07690 Major Facilitator Superfamily NA29_RS08855 PF01047 MarR family NA29_RS08860 PF07690 Major Facilitator Superfamily NA29_RS08865 PF02625 XdhC and CoxI family NA29_RS08865 PF13478 XdhC Rossmann domain NA29_RS08875 PF13193 AMP-binding enzyme C-terminal domain NA29_RS08875 PF00501 AMP-binding enzyme NA29_RS08880 PF06969 HemN C-terminal domain NA29_RS08880 PF04055 Radical SAM superfamily NA29_RS08885 PF01725 Ham1 family NA29_RS08890 PF01138 3' exoribonuclease family, domain 1 NA29_RS08890 PF03725 3' exoribonuclease family, domain 2 NA29_RS08895 PF08340 Domain of unknown function (DUF1732) NA29_RS08895 PF03755 YicC-like family, N-terminal region NA29_RS08900 PF00625 Guanylate kinase NA29_RS08905 PF01192 RNA polymerase Rpb6 NA29_RS08910 PF02824 TGS domain NA29_RS08910 PF04607 Region found in RelA / SpoT proteins NA29_RS08910 PF13291 ACT domain NA29_RS08915 PF03449 Transcription elongation factor, N-terminal NA29_RS08915 PF01272 Transcription elongation factor, GreA/GreB, C-term NA29_RS08920 PF05726 Pirin C-terminal cupin domain NA29_RS08920 PF02678 Pirin NA29_RS08925 PF00999 Sodium/hydrogen exchanger family NA29_RS08930 PF00085 Thioredoxin NA29_RS08945 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS08950 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS08960 PF03814 Potassium-transporting ATPase A subunit NA29_RS08970 PF02669 K+-transporting ATPase, c chain NA29_RS08975 PF13493 Domain of unknown function (DUF4118) NA29_RS08975 PF02702 Osmosensitive K+ channel His kinase sensor domain NA29_RS08975 PF13492 GAF domain NA29_RS08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS08975 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS08980 PF00486 Transcriptional regulatory protein, C terminal NA29_RS08980 PF00072 Response regulator receiver domain NA29_RS08985 PF00893 Small Multidrug Resistance protein NA29_RS09000 PF01152 Bacterial-like globin NA29_RS09015 PF01411 tRNA synthetases class II (A) NA29_RS09015 PF02272 DHHA1 domain NA29_RS09015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NA29_RS09030 PF03641 Possible lysine decarboxylase NA29_RS09035 PF00440 Bacterial regulatory proteins, tetR family NA29_RS09035 PF08359 YsiA-like protein, C-terminal region NA29_RS09040 PF01219 Prokaryotic diacylglycerol kinase NA29_RS09045 PF00534 Glycosyl transferases group 1 NA29_RS09045 PF13439 Glycosyltransferase Family 4 NA29_RS09080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS09080 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS09080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS09085 PF10369 Small subunit of acetolactate synthase NA29_RS09090 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NA29_RS09090 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NA29_RS09095 PF02666 Phosphatidylserine decarboxylase NA29_RS09100 PF01066 CDP-alcohol phosphatidyltransferase NA29_RS09105 PF04972 BON domain NA29_RS09105 PF01476 LysM domain NA29_RS09110 PF00682 HMGL-like NA29_RS09110 PF08502 LeuA allosteric (dimerisation) domain NA29_RS09130 PF04542 Sigma-70 region 2 NA29_RS09130 PF08281 Sigma-70, region 4 NA29_RS09140 PF13458 Periplasmic binding protein NA29_RS09145 PF00312 Ribosomal protein S15 NA29_RS09150 PF03725 3' exoribonuclease family, domain 2 NA29_RS09150 PF01138 3' exoribonuclease family, domain 1 NA29_RS09150 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NA29_RS09150 PF00575 S1 RNA binding domain NA29_RS09150 PF00013 KH domain NA29_RS09175 PF13378 Enolase C-terminal domain-like NA29_RS09175 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NA29_RS09195 PF01554 MatE NA29_RS09205 PF01197 Ribosomal protein L31 NA29_RS09215 PF07690 Major Facilitator Superfamily NA29_RS09230 PF01565 FAD binding domain NA29_RS09230 PF02913 FAD linked oxidases, C-terminal domain NA29_RS09240 PF03358 NADPH-dependent FMN reductase NA29_RS09245 PF03631 Virulence factor BrkB NA29_RS09255 PF12697 Alpha/beta hydrolase family NA29_RS09260 PF01053 Cys/Met metabolism PLP-dependent enzyme NA29_RS09270 PF07690 Major Facilitator Superfamily NA29_RS09275 PF01264 Chorismate synthase NA29_RS09295 PF03480 Bacterial extracellular solute-binding protein, family 7 NA29_RS09305 PF00072 Response regulator receiver domain NA29_RS09305 PF00196 Bacterial regulatory proteins, luxR family NA29_RS09310 PF01144 Coenzyme A transferase NA29_RS09315 PF01144 Coenzyme A transferase NA29_RS09320 PF00106 short chain dehydrogenase NA29_RS09330 PF01042 Endoribonuclease L-PSP NA29_RS09335 PF04607 Region found in RelA / SpoT proteins NA29_RS09335 PF13291 ACT domain NA29_RS09335 PF02824 TGS domain NA29_RS09345 PF03129 Anticodon binding domain NA29_RS09345 PF02824 TGS domain NA29_RS09345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NA29_RS09345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NA29_RS09350 PF00707 Translation initiation factor IF-3, C-terminal domain NA29_RS09350 PF05198 Translation initiation factor IF-3, N-terminal domain NA29_RS09355 PF01632 Ribosomal protein L35 NA29_RS09360 PF00453 Ribosomal protein L20 NA29_RS09365 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NA29_RS09365 PF01409 tRNA synthetases class II core domain (F) NA29_RS09370 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NA29_RS09370 PF01588 Putative tRNA binding domain NA29_RS09370 PF03147 Ferredoxin-fold anticodon binding domain NA29_RS09370 PF03484 tRNA synthetase B5 domain NA29_RS09370 PF03483 B3/4 domain NA29_RS09375 PF00216 Bacterial DNA-binding protein NA29_RS09385 PF13188 PAS domain NA29_RS09385 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS09385 PF00563 EAL domain NA29_RS09385 PF03707 Bacterial signalling protein N terminal repeat NA29_RS09390 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS09390 PF17151 Periplasmic sensor domain NA29_RS09400 PF00301 Rubredoxin NA29_RS09425 PF00563 EAL domain NA29_RS09425 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS09425 PF13426 PAS domain NA29_RS09435 PF06736 Protein of unknown function (DUF1211) NA29_RS09440 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS09440 PF05230 MASE2 domain NA29_RS09445 PF01613 Flavin reductase like domain NA29_RS09455 PF00561 alpha/beta hydrolase fold NA29_RS09470 PF08402 TOBE domain NA29_RS09470 PF00005 ABC transporter NA29_RS09475 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS09480 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS09490 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS09490 PF04324 BFD-like [2Fe-2S] binding domain NA29_RS09495 PF01266 FAD dependent oxidoreductase NA29_RS09505 PF04940 Sensors of blue-light using FAD NA29_RS09505 PF00563 EAL domain NA29_RS09515 PF00563 EAL domain NA29_RS09515 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS09515 PF00360 Phytochrome region NA29_RS09515 PF01590 GAF domain NA29_RS09530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NA29_RS09530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NA29_RS09545 PF03707 Bacterial signalling protein N terminal repeat NA29_RS09545 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS09545 PF00563 EAL domain NA29_RS09690 PF00501 AMP-binding enzyme NA29_RS09690 PF13193 AMP-binding enzyme C-terminal domain NA29_RS09700 PF04262 Glutamate-cysteine ligase NA29_RS09715 PF17092 Penicillin-binding protein OB-like domain NA29_RS09715 PF00912 Transglycosylase NA29_RS09715 PF00905 Penicillin binding protein transpeptidase domain NA29_RS09720 PF01810 LysE type translocator NA29_RS09730 PF02203 Tar ligand binding domain homologue NA29_RS09730 PF00672 HAMP domain NA29_RS09730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS09740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NA29_RS09740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NA29_RS09745 PF00667 FAD binding domain NA29_RS09745 PF00258 Flavodoxin NA29_RS09745 PF00175 Oxidoreductase NAD-binding domain NA29_RS09750 PF02779 Transketolase, pyrimidine binding domain NA29_RS09750 PF16078 2-oxoglutarate dehydrogenase N-terminus NA29_RS09750 PF00676 Dehydrogenase E1 component NA29_RS09750 PF16870 2-oxoglutarate dehydrogenase C-terminal NA29_RS09755 PF02817 e3 binding domain NA29_RS09755 PF00364 Biotin-requiring enzyme NA29_RS09755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NA29_RS09760 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS09760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NA29_RS09765 PF03969 AFG1-like ATPase NA29_RS09795 PF01047 MarR family NA29_RS09850 PF00437 Type II/IV secretion system protein NA29_RS09880 PF02954 Bacterial regulatory protein, Fis family NA29_RS09880 PF06490 Flagellar regulatory protein FleQ NA29_RS09880 PF00158 Sigma-54 interaction domain NA29_RS09890 PF02705 K+ potassium transporter NA29_RS09895 PF00575 S1 RNA binding domain NA29_RS09895 PF17674 HHH domain NA29_RS09895 PF09371 Tex-like protein N-terminal domain NA29_RS09895 PF16921 Tex protein YqgF-like domain NA29_RS09910 PF06733 DEAD_2 NA29_RS09910 PF13307 Helicase C-terminal domain NA29_RS09915 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NA29_RS09915 PF00117 Glutamine amidotransferase class-I NA29_RS09920 PF13525 Outer membrane lipoprotein NA29_RS09925 PF00849 RNA pseudouridylate synthase NA29_RS09925 PF01479 S4 domain NA29_RS09930 PF02578 Multi-copper polyphenol oxidoreductase laccase NA29_RS09940 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NA29_RS09945 PF00108 Thiolase, N-terminal domain NA29_RS09945 PF02803 Thiolase, C-terminal domain NA29_RS09950 PF00106 short chain dehydrogenase NA29_RS09955 PF07879 PHB/PHA accumulation regulator DNA-binding domain NA29_RS09955 PF05233 PHB accumulation regulatory domain NA29_RS09960 PF00919 Uncharacterized protein family UPF0004 NA29_RS09960 PF04055 Radical SAM superfamily NA29_RS09960 PF18693 TRAM domain NA29_RS09965 PF00294 pfkB family carbohydrate kinase NA29_RS09970 PF00108 Thiolase, N-terminal domain NA29_RS09970 PF02803 Thiolase, C-terminal domain NA29_RS09975 PF01053 Cys/Met metabolism PLP-dependent enzyme NA29_RS10000 PF01965 DJ-1/PfpI family NA29_RS10010 PF02423 Ornithine cyclodeaminase/mu-crystallin family NA29_RS10015 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS10020 PF07690 Major Facilitator Superfamily NA29_RS10025 PF07687 Peptidase dimerisation domain NA29_RS10025 PF01546 Peptidase family M20/M25/M40 NA29_RS10030 PF00270 DEAD/DEAH box helicase NA29_RS10030 PF17757 UvrB interaction domain NA29_RS10030 PF02559 CarD-like/TRCF domain NA29_RS10030 PF00271 Helicase conserved C-terminal domain NA29_RS10030 PF03461 TRCF domain NA29_RS10035 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NA29_RS10040 PF02542 YgbB family NA29_RS10045 PF02627 Carboxymuconolactone decarboxylase family NA29_RS10050 PF00578 AhpC/TSA family NA29_RS10055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS10055 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS10055 PF00672 HAMP domain NA29_RS10060 PF00486 Transcriptional regulatory protein, C terminal NA29_RS10060 PF00072 Response regulator receiver domain NA29_RS10095 PF12167 Arm DNA-binding domain NA29_RS10095 PF00589 Phage integrase family NA29_RS10130 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NA29_RS10135 PF00893 Small Multidrug Resistance protein NA29_RS10145 PF00127 Copper binding proteins, plastocyanin/azurin family NA29_RS10150 PF03466 LysR substrate binding domain NA29_RS10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10155 PF07690 Major Facilitator Superfamily NA29_RS10160 PF05726 Pirin C-terminal cupin domain NA29_RS10160 PF02678 Pirin NA29_RS10165 PF07715 TonB-dependent Receptor Plug Domain NA29_RS10165 PF00593 TonB dependent receptor NA29_RS10180 PF00557 Metallopeptidase family M24 NA29_RS10200 PF02321 Outer membrane efflux protein NA29_RS10205 PF00873 AcrB/AcrD/AcrF family NA29_RS10210 PF13533 Biotin-lipoyl like NA29_RS10215 PF07859 alpha/beta hydrolase fold NA29_RS10220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10220 PF03466 LysR substrate binding domain NA29_RS10225 PF00583 Acetyltransferase (GNAT) family NA29_RS10235 PF02875 Mur ligase family, glutamate ligase domain NA29_RS10235 PF08245 Mur ligase middle domain NA29_RS10235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NA29_RS10240 PF08245 Mur ligase middle domain NA29_RS10240 PF08443 RimK-like ATP-grasp domain NA29_RS10240 PF02875 Mur ligase family, glutamate ligase domain NA29_RS10245 PF00005 ABC transporter NA29_RS10245 PF00664 ABC transporter transmembrane region NA29_RS10255 PF04381 Putative exonuclease, RdgC NA29_RS10270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10270 PF03466 LysR substrate binding domain NA29_RS10285 PF03775 Septum formation inhibitor MinC, C-terminal domain NA29_RS10285 PF05209 Septum formation inhibitor MinC, N-terminal domain NA29_RS10290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NA29_RS10295 PF03776 Septum formation topological specificity factor MinE NA29_RS10305 PF00501 AMP-binding enzyme NA29_RS10305 PF13193 AMP-binding enzyme C-terminal domain NA29_RS10310 PF00108 Thiolase, N-terminal domain NA29_RS10310 PF02803 Thiolase, C-terminal domain NA29_RS10325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS10325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS10325 PF09317 Domain of unknown function (DUF1974) NA29_RS10330 PF00440 Bacterial regulatory proteins, tetR family NA29_RS10335 PF05698 Bacterial trigger factor protein (TF) C-terminus NA29_RS10335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NA29_RS10335 PF05697 Bacterial trigger factor protein (TF) NA29_RS10340 PF00574 Clp protease NA29_RS10345 PF06689 ClpX C4-type zinc finger NA29_RS10345 PF07724 AAA domain (Cdc48 subfamily) NA29_RS10345 PF10431 C-terminal, D2-small domain, of ClpB protein NA29_RS10350 PF05362 Lon protease (S16) C-terminal proteolytic domain NA29_RS10350 PF02190 ATP-dependent protease La (LON) substrate-binding domain NA29_RS10350 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS10355 PF00216 Bacterial DNA-binding protein NA29_RS10370 PF05698 Bacterial trigger factor protein (TF) C-terminus NA29_RS10375 PF13472 GDSL-like Lipase/Acylhydrolase family NA29_RS10380 PF00005 ABC transporter NA29_RS10385 PF00342 Phosphoglucose isomerase NA29_RS10390 PF03853 YjeF-related protein N-terminus NA29_RS10390 PF01256 Carbohydrate kinase NA29_RS10395 PF01266 FAD dependent oxidoreductase NA29_RS10400 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NA29_RS10400 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NA29_RS10400 PF02769 AIR synthase related protein, C-terminal domain NA29_RS10410 PF01722 BolA-like protein NA29_RS10415 PF04279 Intracellular septation protein A NA29_RS10425 PF01641 SelR domain NA29_RS10430 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NA29_RS10435 PF13193 AMP-binding enzyme C-terminal domain NA29_RS10435 PF00501 AMP-binding enzyme NA29_RS10440 PF02653 Branched-chain amino acid transport system / permease component NA29_RS10450 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS10450 PF00005 ABC transporter NA29_RS10455 PF00005 ABC transporter NA29_RS10460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NA29_RS10460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NA29_RS10460 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS10465 PF00857 Isochorismatase family NA29_RS10475 PF16884 N-terminal domain of oxidoreductase NA29_RS10475 PF00107 Zinc-binding dehydrogenase NA29_RS10490 PF01571 Aminomethyltransferase folate-binding domain NA29_RS10495 PF02618 YceG-like family NA29_RS10500 PF02223 Thymidylate kinase NA29_RS10505 PF09115 DNA polymerase III, delta subunit, C terminal NA29_RS10510 PF01026 TatD related DNase NA29_RS10520 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS10525 PF00982 Glycosyltransferase family 20 NA29_RS10530 PF02358 Trehalose-phosphatase NA29_RS10535 PF00175 Oxidoreductase NAD-binding domain NA29_RS10535 PF00258 Flavodoxin NA29_RS10535 PF00667 FAD binding domain NA29_RS10540 PF00708 Acylphosphatase NA29_RS10545 PF02203 Tar ligand binding domain homologue NA29_RS10545 PF00672 HAMP domain NA29_RS10545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS10550 PF00072 Response regulator receiver domain NA29_RS10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS10550 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS10550 PF09456 RcsC Alpha-Beta-Loop (ABL) NA29_RS10555 PF03006 Haemolysin-III related NA29_RS10560 PF00578 AhpC/TSA family NA29_RS10565 PF01037 Lrp/AsnC ligand binding domain NA29_RS10570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS10570 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS10570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS10575 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS10580 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS10585 PF00005 ABC transporter NA29_RS10590 PF00202 Aminotransferase class-III NA29_RS10595 PF04958 Arginine N-succinyltransferase beta subunit NA29_RS10605 PF13954 PapC N-terminal domain NA29_RS10605 PF13953 PapC C-terminal domain NA29_RS10605 PF00577 Outer membrane usher protein NA29_RS10625 PF00210 Ferritin-like domain NA29_RS10630 PF13380 CoA binding domain NA29_RS10630 PF00583 Acetyltransferase (GNAT) family NA29_RS10630 PF13607 Succinyl-CoA ligase like flavodoxin domain NA29_RS10635 PF01544 CorA-like Mg2+ transporter protein NA29_RS10640 PF02515 CoA-transferase family III NA29_RS10645 PF01925 Sulfite exporter TauE/SafE NA29_RS10655 PF00072 Response regulator receiver domain NA29_RS10655 PF00196 Bacterial regulatory proteins, luxR family NA29_RS10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS10660 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS10660 PF09456 RcsC Alpha-Beta-Loop (ABL) NA29_RS10660 PF00072 Response regulator receiver domain NA29_RS10665 PF03466 LysR substrate binding domain NA29_RS10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10670 PF04209 homogentisate 1,2-dioxygenase NA29_RS10680 PF01594 AI-2E family transporter NA29_RS10690 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NA29_RS10695 PF00171 Aldehyde dehydrogenase family NA29_RS10700 PF04996 Succinylarginine dihydrolase NA29_RS10705 PF03358 NADPH-dependent FMN reductase NA29_RS10725 PF01209 ubiE/COQ5 methyltransferase family NA29_RS10730 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS10730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NA29_RS10735 PF05175 Methyltransferase small domain NA29_RS10755 PF03170 Bacterial cellulose synthase subunit NA29_RS10760 PF01270 Glycosyl hydrolases family 8 NA29_RS10765 PF13181 Tetratricopeptide repeat NA29_RS10765 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) NA29_RS10775 PF07238 PilZ domain NA29_RS10775 PF00535 Glycosyl transferase family 2 NA29_RS10780 PF11658 Cellulose biosynthesis protein BcsG NA29_RS10785 PF00248 Aldo/keto reductase family NA29_RS10795 PF14759 Reductase C-terminal NA29_RS10795 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS10800 PF07690 Major Facilitator Superfamily NA29_RS10810 PF02321 Outer membrane efflux protein NA29_RS10815 PF00873 AcrB/AcrD/AcrF family NA29_RS10820 PF13533 Biotin-lipoyl like NA29_RS10825 PF00106 short chain dehydrogenase NA29_RS10835 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NA29_RS10835 PF00561 alpha/beta hydrolase fold NA29_RS10845 PF01569 PAP2 superfamily NA29_RS10850 PF01757 Acyltransferase family NA29_RS10855 PF03707 Bacterial signalling protein N terminal repeat NA29_RS10855 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS10855 PF00563 EAL domain NA29_RS10860 PF01476 LysM domain NA29_RS10860 PF01551 Peptidase family M23 NA29_RS10875 PF08281 Sigma-70, region 4 NA29_RS10875 PF04542 Sigma-70 region 2 NA29_RS10885 PF13649 Methyltransferase domain NA29_RS10890 PF00654 Voltage gated chloride channel NA29_RS10895 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS10895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS10895 PF00672 HAMP domain NA29_RS10900 PF00072 Response regulator receiver domain NA29_RS10900 PF00486 Transcriptional regulatory protein, C terminal NA29_RS10910 PF01032 FecCD transport family NA29_RS10915 PF00005 ABC transporter NA29_RS10920 PF00593 TonB dependent receptor NA29_RS10920 PF07715 TonB-dependent Receptor Plug Domain NA29_RS10925 PF13640 2OG-Fe(II) oxygenase superfamily NA29_RS10925 PF18331 PKHD-type hydroxylase C-terminal domain NA29_RS10935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10935 PF03466 LysR substrate binding domain NA29_RS10945 PF03466 LysR substrate binding domain NA29_RS10945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10955 PF00753 Metallo-beta-lactamase superfamily NA29_RS10965 PF03466 LysR substrate binding domain NA29_RS10965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10990 PF03466 LysR substrate binding domain NA29_RS10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS10995 PF06441 Epoxide hydrolase N terminus NA29_RS11000 PF00440 Bacterial regulatory proteins, tetR family NA29_RS11005 PF01220 Dehydroquinase class II NA29_RS11010 PF00083 Sugar (and other) transporter NA29_RS11010 PF07690 Major Facilitator Superfamily NA29_RS11035 PF00672 HAMP domain NA29_RS11035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS11035 PF02203 Tar ligand binding domain homologue NA29_RS11040 PF00701 Dihydrodipicolinate synthetase family NA29_RS11050 PF00158 Sigma-54 interaction domain NA29_RS11050 PF02954 Bacterial regulatory protein, Fis family NA29_RS11050 PF06490 Flagellar regulatory protein FleQ NA29_RS11055 PF00072 Response regulator receiver domain NA29_RS11055 PF02954 Bacterial regulatory protein, Fis family NA29_RS11055 PF00158 Sigma-54 interaction domain NA29_RS11065 PF13091 PLD-like domain NA29_RS11065 PF13396 Phospholipase_D-nuclease N-terminal NA29_RS11075 PF01425 Amidase NA29_RS11085 PF00563 EAL domain NA29_RS11085 PF03707 Bacterial signalling protein N terminal repeat NA29_RS11085 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS11110 PF00593 TonB dependent receptor NA29_RS11110 PF07715 TonB-dependent Receptor Plug Domain NA29_RS11120 PF04542 Sigma-70 region 2 NA29_RS11120 PF08281 Sigma-70, region 4 NA29_RS11125 PF01202 Shikimate kinase NA29_RS11130 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS11135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NA29_RS11135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NA29_RS11140 PF05853 beta-keto acid cleavage enzyme NA29_RS11150 PF00501 AMP-binding enzyme NA29_RS11155 PF07690 Major Facilitator Superfamily NA29_RS11180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11180 PF03466 LysR substrate binding domain NA29_RS11200 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NA29_RS11205 PF01177 Asp/Glu/Hydantoin racemase NA29_RS11210 PF07730 Histidine kinase NA29_RS11210 PF17200 Single Cache domain 2 NA29_RS11215 PF00072 Response regulator receiver domain NA29_RS11215 PF00196 Bacterial regulatory proteins, luxR family NA29_RS11220 PF07969 Amidohydrolase family NA29_RS11235 PF03466 LysR substrate binding domain NA29_RS11235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11240 PF05899 Protein of unknown function (DUF861) NA29_RS11240 PF07883 Cupin domain NA29_RS11245 PF01979 Amidohydrolase family NA29_RS11275 PF00267 Gram-negative porin NA29_RS11285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NA29_RS11285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS11290 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS11295 PF09084 NMT1/THI5 like NA29_RS11300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NA29_RS11305 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS11310 PF00005 ABC transporter NA29_RS11315 PF07859 alpha/beta hydrolase fold NA29_RS11320 PF00701 Dihydrodipicolinate synthetase family NA29_RS11330 PF00324 Amino acid permease NA29_RS11350 PF00578 AhpC/TSA family NA29_RS11350 PF17991 Thioredoxin like C-terminal domain NA29_RS11350 PF02683 Cytochrome C biogenesis protein transmembrane region NA29_RS11355 PF04828 Glutathione-dependent formaldehyde-activating enzyme NA29_RS11365 PF00486 Transcriptional regulatory protein, C terminal NA29_RS11365 PF00072 Response regulator receiver domain NA29_RS11370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS11370 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS11370 PF00672 HAMP domain NA29_RS11380 PF12833 Helix-turn-helix domain NA29_RS11380 PF06719 AraC-type transcriptional regulator N-terminus NA29_RS11385 PF00106 short chain dehydrogenase NA29_RS11410 PF00005 ABC transporter NA29_RS11415 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS11425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11425 PF03466 LysR substrate binding domain NA29_RS11430 PF00491 Arginase family NA29_RS11435 PF01979 Amidohydrolase family NA29_RS11440 PF00324 Amino acid permease NA29_RS11445 PF00221 Aromatic amino acid lyase NA29_RS11450 PF17392 Urocanase C-terminal domain NA29_RS11450 PF17391 Urocanase N-terminal domain NA29_RS11450 PF01175 Urocanase Rossmann-like domain NA29_RS11455 PF00392 Bacterial regulatory proteins, gntR family NA29_RS11455 PF07702 UTRA domain NA29_RS11460 PF13609 Gram-negative porin NA29_RS11465 PF03641 Possible lysine decarboxylase NA29_RS11470 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS11475 PF13416 Bacterial extracellular solute-binding protein NA29_RS11480 PF08402 TOBE domain NA29_RS11480 PF00005 ABC transporter NA29_RS11485 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11490 PF03466 LysR substrate binding domain NA29_RS11495 PF05426 Alginate lyase NA29_RS11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11500 PF03466 LysR substrate binding domain NA29_RS11505 PF00330 Aconitase family (aconitate hydratase) NA29_RS11510 PF09084 NMT1/THI5 like NA29_RS11515 PF00296 Luciferase-like monooxygenase NA29_RS11520 PF01168 Alanine racemase, N-terminal domain NA29_RS11520 PF14031 Putative serine dehydratase domain NA29_RS11525 PF13419 Haloacid dehalogenase-like hydrolase NA29_RS11530 PF03466 LysR substrate binding domain NA29_RS11530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11535 PF07690 Major Facilitator Superfamily NA29_RS11540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11540 PF03466 LysR substrate binding domain NA29_RS11550 PF01361 Tautomerase enzyme NA29_RS11565 PF09084 NMT1/THI5 like NA29_RS11580 PF00756 Putative esterase NA29_RS11585 PF00202 Aminotransferase class-III NA29_RS11590 PF03466 LysR substrate binding domain NA29_RS11590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11595 PF00672 HAMP domain NA29_RS11595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS11595 PF02203 Tar ligand binding domain homologue NA29_RS11600 PF00881 Nitroreductase family NA29_RS11610 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS11610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NA29_RS11620 PF03328 HpcH/HpaI aldolase/citrate lyase family NA29_RS11625 PF02515 CoA-transferase family III NA29_RS11630 PF03390 2-hydroxycarboxylate transporter family NA29_RS11635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11635 PF03466 LysR substrate binding domain NA29_RS11640 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS11655 PF07478 D-ala D-ala ligase C-terminus NA29_RS11655 PF01820 D-ala D-ala ligase N-terminus NA29_RS11660 PF02627 Carboxymuconolactone decarboxylase family NA29_RS11665 PF00155 Aminotransferase class I and II NA29_RS11665 PF00392 Bacterial regulatory proteins, gntR family NA29_RS11670 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS11675 PF13411 MerR HTH family regulatory protein NA29_RS11680 PF01804 Penicillin amidase NA29_RS11695 PF00664 ABC transporter transmembrane region NA29_RS11695 PF00005 ABC transporter NA29_RS11775 PF17862 AAA+ lid domain NA29_RS11775 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS11775 PF01434 Peptidase family M41 NA29_RS11785 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS11785 PF17151 Periplasmic sensor domain NA29_RS11790 PF00857 Isochorismatase family NA29_RS11795 PF00083 Sugar (and other) transporter NA29_RS11805 PF00465 Iron-containing alcohol dehydrogenase NA29_RS11810 PF00171 Aldehyde dehydrogenase family NA29_RS11815 PF00392 Bacterial regulatory proteins, gntR family NA29_RS11815 PF07702 UTRA domain NA29_RS11825 PF00005 ABC transporter NA29_RS11830 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS11835 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11845 PF03466 LysR substrate binding domain NA29_RS11850 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS11855 PF00356 Bacterial regulatory proteins, lacI family NA29_RS11865 PF00171 Aldehyde dehydrogenase family NA29_RS11870 PF00106 short chain dehydrogenase NA29_RS11885 PF03466 LysR substrate binding domain NA29_RS11885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11900 PF17763 Glutaminase/Asparaginase C-terminal domain NA29_RS11900 PF00710 Asparaginase, N-terminal NA29_RS11910 PF00459 Inositol monophosphatase family NA29_RS11920 PF06039 Malate:quinone oxidoreductase (Mqo) NA29_RS11925 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS11925 PF00107 Zinc-binding dehydrogenase NA29_RS11940 PF14698 Argininosuccinate lyase C-terminal NA29_RS11940 PF00206 Lyase NA29_RS11945 PF00106 short chain dehydrogenase NA29_RS11950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS11950 PF03466 LysR substrate binding domain NA29_RS11970 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NA29_RS11970 PF00753 Metallo-beta-lactamase superfamily NA29_RS11970 PF10996 Beta-Casp domain NA29_RS11980 PF00582 Universal stress protein family NA29_RS11985 PF00072 Response regulator receiver domain NA29_RS11985 PF00196 Bacterial regulatory proteins, luxR family NA29_RS11990 PF13545 Crp-like helix-turn-helix domain NA29_RS11990 PF00027 Cyclic nucleotide-binding domain NA29_RS11995 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS12000 PF05231 MASE1 NA29_RS12000 PF07730 Histidine kinase NA29_RS12000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS12010 PF13823 Alcohol dehydrogenase GroES-associated NA29_RS12010 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS12010 PF00107 Zinc-binding dehydrogenase NA29_RS12015 PF14572 Phosphoribosyl synthetase-associated domain NA29_RS12015 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NA29_RS12020 PF00591 Glycosyl transferase family, a/b domain NA29_RS12020 PF02885 Glycosyl transferase family, helical bundle domain NA29_RS12020 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NA29_RS12080 PF00440 Bacterial regulatory proteins, tetR family NA29_RS12085 PF00011 Hsp20/alpha crystallin family NA29_RS12120 PF00156 Phosphoribosyl transferase domain NA29_RS12120 PF01738 Dienelactone hydrolase family NA29_RS12125 PF02867 Ribonucleotide reductase, barrel domain NA29_RS12125 PF00317 Ribonucleotide reductase, all-alpha domain NA29_RS12125 PF03477 ATP cone domain NA29_RS12160 PF07859 alpha/beta hydrolase fold NA29_RS12175 PF07687 Peptidase dimerisation domain NA29_RS12175 PF01546 Peptidase family M20/M25/M40 NA29_RS12180 PF07690 Major Facilitator Superfamily NA29_RS12185 PF00795 Carbon-nitrogen hydrolase NA29_RS12190 PF01546 Peptidase family M20/M25/M40 NA29_RS12190 PF07687 Peptidase dimerisation domain NA29_RS12195 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS12205 PF00484 Carbonic anhydrase NA29_RS12215 PF08212 Lipocalin-like domain NA29_RS12235 PF02027 RolB/RolC glucosidase family NA29_RS12235 PF01593 Flavin containing amine oxidoreductase NA29_RS12255 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS12255 PF14497 Glutathione S-transferase, C-terminal domain NA29_RS12260 PF03358 NADPH-dependent FMN reductase NA29_RS12265 PF01022 Bacterial regulatory protein, arsR family NA29_RS12275 PF01758 Sodium Bile acid symporter family NA29_RS12295 PF12697 Alpha/beta hydrolase family NA29_RS12315 PF00285 Citrate synthase, C-terminal domain NA29_RS12320 PF02515 CoA-transferase family III NA29_RS12330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NA29_RS12330 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS12370 PF00884 Sulfatase NA29_RS12370 PF16347 Domain of unknown function (DUF4976) NA29_RS12375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS12375 PF03466 LysR substrate binding domain NA29_RS12380 PF01717 Cobalamin-independent synthase, Catalytic domain NA29_RS12380 PF08267 Cobalamin-independent synthase, N-terminal domain NA29_RS12385 PF00486 Transcriptional regulatory protein, C terminal NA29_RS12385 PF00072 Response regulator receiver domain NA29_RS12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS12390 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS12395 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NA29_RS12400 PF04454 Encapsulating protein for peroxidase NA29_RS12405 PF04261 Dyp-type peroxidase family NA29_RS12410 PF00873 AcrB/AcrD/AcrF family NA29_RS12420 PF02321 Outer membrane efflux protein NA29_RS12425 PF00486 Transcriptional regulatory protein, C terminal NA29_RS12425 PF00072 Response regulator receiver domain NA29_RS12455 PF00472 RF-1 domain NA29_RS12460 PF01381 Helix-turn-helix NA29_RS12465 PF13657 HipA N-terminal domain NA29_RS12465 PF07804 HipA-like C-terminal domain NA29_RS12475 PF01554 MatE NA29_RS12480 PF07690 Major Facilitator Superfamily NA29_RS12485 PF06150 ChaB NA29_RS12500 PF04972 BON domain NA29_RS12510 PF00360 Phytochrome region NA29_RS12510 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS12510 PF00563 EAL domain NA29_RS12510 PF01590 GAF domain NA29_RS12520 PF00924 Mechanosensitive ion channel NA29_RS12520 PF12795 Mechanosensitive ion channel porin domain NA29_RS12520 PF12794 Mechanosensitive ion channel inner membrane domain 1 NA29_RS12525 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS12525 PF00563 EAL domain NA29_RS12525 PF03707 Bacterial signalling protein N terminal repeat NA29_RS12535 PF07690 Major Facilitator Superfamily NA29_RS12540 PF13533 Biotin-lipoyl like NA29_RS12545 PF02321 Outer membrane efflux protein NA29_RS12560 PF03060 Nitronate monooxygenase NA29_RS12565 PF03060 Nitronate monooxygenase NA29_RS12570 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS12570 PF00107 Zinc-binding dehydrogenase NA29_RS12575 PF06441 Epoxide hydrolase N terminus NA29_RS12580 PF01638 HxlR-like helix-turn-helix NA29_RS12585 PF00005 ABC transporter NA29_RS12590 PF00005 ABC transporter NA29_RS12590 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS12595 PF02653 Branched-chain amino acid transport system / permease component NA29_RS12605 PF01580 FtsK/SpoIIIE family NA29_RS12605 PF17854 FtsK alpha domain NA29_RS12605 PF09397 Ftsk gamma domain NA29_RS12605 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NA29_RS12615 PF00563 EAL domain NA29_RS12615 PF08448 PAS fold NA29_RS12615 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS12625 PF01047 MarR family NA29_RS12630 PF07690 Major Facilitator Superfamily NA29_RS12640 PF12951 Passenger-associated-transport-repeat NA29_RS12640 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat NA29_RS12640 PF03797 Autotransporter beta-domain NA29_RS12645 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS12645 PF17158 Membrane-associated sensor, integral membrane domain NA29_RS12650 PF01614 Bacterial transcriptional regulator NA29_RS12650 PF09339 IclR helix-turn-helix domain NA29_RS12655 PF00501 AMP-binding enzyme NA29_RS12655 PF13193 AMP-binding enzyme C-terminal domain NA29_RS12660 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS12665 PF00005 ABC transporter NA29_RS12665 PF08402 TOBE domain NA29_RS12675 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS12680 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NA29_RS12680 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NA29_RS12685 PF02615 Malate/L-lactate dehydrogenase NA29_RS12690 PF00939 Sodium:sulfate symporter transmembrane region NA29_RS12700 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS12700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NA29_RS12705 PF00209 Sodium:neurotransmitter symporter family NA29_RS12730 PF02634 FdhD/NarQ family NA29_RS12735 PF00384 Molybdopterin oxidoreductase NA29_RS12735 PF01568 Molydopterin dinucleotide binding domain NA29_RS12735 PF12838 4Fe-4S dicluster domain NA29_RS12735 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NA29_RS12735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS12740 PF10531 SLBB domain NA29_RS12740 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NA29_RS12740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NA29_RS12755 PF00384 Molybdopterin oxidoreductase NA29_RS12785 PF07715 TonB-dependent Receptor Plug Domain NA29_RS12785 PF00593 TonB dependent receptor NA29_RS12790 PF00175 Oxidoreductase NAD-binding domain NA29_RS12790 PF00970 Oxidoreductase FAD-binding domain NA29_RS12795 PF16363 GDP-mannose 4,6 dehydratase NA29_RS12820 PF00149 Calcineurin-like phosphoesterase NA29_RS12825 PF00216 Bacterial DNA-binding protein NA29_RS12835 PF00403 Heavy-metal-associated domain NA29_RS12840 PF13411 MerR HTH family regulatory protein NA29_RS12845 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding NA29_RS12845 PF10518 TAT (twin-arginine translocation) pathway signal sequence NA29_RS12845 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS12850 PF00563 EAL domain NA29_RS12850 PF03707 Bacterial signalling protein N terminal repeat NA29_RS12850 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS12855 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS12865 PF00892 EamA-like transporter family NA29_RS12875 PF00171 Aldehyde dehydrogenase family NA29_RS12880 PF00005 ABC transporter NA29_RS12880 PF12848 ABC transporter NA29_RS12885 PF02608 ABC transporter substrate-binding protein PnrA-like NA29_RS12890 PF02653 Branched-chain amino acid transport system / permease component NA29_RS12895 PF02653 Branched-chain amino acid transport system / permease component NA29_RS12900 PF00005 ABC transporter NA29_RS12905 PF03466 LysR substrate binding domain NA29_RS12905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS12910 PF01979 Amidohydrolase family NA29_RS12915 PF00860 Permease family NA29_RS12920 PF00576 HIUase/Transthyretin family NA29_RS12930 PF01554 MatE NA29_RS12950 PF14403 Circularly permuted ATP-grasp type 2 NA29_RS12955 PF04115 Ureidoglycolate lyase NA29_RS12960 PF03561 Allantoicase repeat NA29_RS12965 PF01014 Uricase NA29_RS12965 PF09349 OHCU decarboxylase NA29_RS12975 PF02016 LD-carboxypeptidase N-terminal domain NA29_RS12975 PF17676 LD-carboxypeptidase C-terminal domain NA29_RS12980 PF14437 MafB19-like deaminase NA29_RS12985 PF00392 Bacterial regulatory proteins, gntR family NA29_RS12990 PF13458 Periplasmic binding protein NA29_RS12995 PF02653 Branched-chain amino acid transport system / permease component NA29_RS13005 PF00005 ABC transporter NA29_RS13010 PF00005 ABC transporter NA29_RS13025 PF03466 LysR substrate binding domain NA29_RS13025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS13040 PF02321 Outer membrane efflux protein NA29_RS13045 PF13533 Biotin-lipoyl like NA29_RS13055 PF04632 Fusaric acid resistance protein family NA29_RS13060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS13060 PF03466 LysR substrate binding domain NA29_RS13065 PF03466 LysR substrate binding domain NA29_RS13065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS13075 PF00561 alpha/beta hydrolase fold NA29_RS13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS13080 PF03466 LysR substrate binding domain NA29_RS13110 PF00196 Bacterial regulatory proteins, luxR family NA29_RS13110 PF00072 Response regulator receiver domain NA29_RS13115 PF07730 Histidine kinase NA29_RS13120 PF02540 NAD synthase NA29_RS13120 PF00117 Glutamine amidotransferase class-I NA29_RS13120 PF00958 GMP synthase C terminal domain NA29_RS13130 PF00571 CBS domain NA29_RS13130 PF00478 IMP dehydrogenase / GMP reductase domain NA29_RS13140 PF03658 RnfH family Ubiquitin NA29_RS13145 PF03364 Polyketide cyclase / dehydrase and lipid transport NA29_RS13150 PF01668 SmpB protein NA29_RS13155 PF01145 SPFH domain / Band 7 family NA29_RS13155 PF16200 C-terminal region of band_7 NA29_RS13165 PF02896 PEP-utilising enzyme, TIM barrel domain NA29_RS13165 PF00391 PEP-utilising enzyme, mobile domain NA29_RS13165 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NA29_RS13170 PF03618 Kinase/pyrophosphorylase NA29_RS13175 PF08032 RNA 2'-O ribose methyltransferase substrate binding NA29_RS13175 PF00588 SpoU rRNA Methylase family NA29_RS13180 PF01351 Ribonuclease HII NA29_RS13185 PF02684 Lipid-A-disaccharide synthetase NA29_RS13190 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NA29_RS13190 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS13195 PF07977 FabA-like domain NA29_RS13200 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NA29_RS13200 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS13210 PF07244 Surface antigen variable number repeat NA29_RS13210 PF01103 Surface antigen NA29_RS13215 PF02163 Peptidase family M50 NA29_RS13215 PF17820 PDZ domain NA29_RS13220 PF13288 DXP reductoisomerase C-terminal domain NA29_RS13220 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NA29_RS13220 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NA29_RS13230 PF01255 Putative undecaprenyl diphosphate synthase NA29_RS13235 PF01765 Ribosome recycling factor NA29_RS13240 PF00696 Amino acid kinase family NA29_RS13245 PF00889 Elongation factor TS NA29_RS13250 PF00318 Ribosomal protein S2 NA29_RS13260 PF00557 Metallopeptidase family M24 NA29_RS13265 PF08335 GlnD PII-uridylyltransferase NA29_RS13265 PF01966 HD domain NA29_RS13265 PF01909 Nucleotidyltransferase domain NA29_RS13270 PF00849 RNA pseudouridylate synthase NA29_RS13270 PF01479 S4 domain NA29_RS13275 PF01327 Polypeptide deformylase NA29_RS13280 PF01653 NAD-dependent DNA ligase adenylation domain NA29_RS13280 PF00533 BRCA1 C Terminus (BRCT) domain NA29_RS13280 PF03120 NAD-dependent DNA ligase OB-fold domain NA29_RS13280 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NA29_RS13280 PF12826 Helix-hairpin-helix motif NA29_RS13290 PF06470 SMC proteins Flexible Hinge Domain NA29_RS13290 PF02463 RecF/RecN/SMC N terminal domain NA29_RS13300 PF00155 Aminotransferase class I and II NA29_RS13305 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NA29_RS13305 PF14602 Hexapeptide repeat of succinyl-transferase NA29_RS13305 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS13310 PF03960 ArsC family NA29_RS13315 PF07687 Peptidase dimerisation domain NA29_RS13315 PF01546 Peptidase family M20/M25/M40 NA29_RS13320 PF05175 Methyltransferase small domain NA29_RS13325 PF13091 PLD-like domain NA29_RS13325 PF13396 Phospholipase_D-nuclease N-terminal NA29_RS13330 PF12848 ABC transporter NA29_RS13330 PF00005 ABC transporter NA29_RS13340 PF18073 Rubredoxin metal binding domain NA29_RS13345 PF00842 Alanine racemase, C-terminal domain NA29_RS13345 PF01168 Alanine racemase, N-terminal domain NA29_RS13350 PF07690 Major Facilitator Superfamily NA29_RS13355 PF08543 Phosphomethylpyrimidine kinase NA29_RS13365 PF03167 Uracil DNA glycosylase superfamily NA29_RS13375 PF00814 Glycoprotease family NA29_RS13380 PF00270 DEAD/DEAH box helicase NA29_RS13380 PF00271 Helicase conserved C-terminal domain NA29_RS13385 PF00561 alpha/beta hydrolase fold NA29_RS13390 PF01274 Malate synthase NA29_RS13395 PF03466 LysR substrate binding domain NA29_RS13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS13400 PF00582 Universal stress protein family NA29_RS13405 PF00463 Isocitrate lyase family NA29_RS13415 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NA29_RS13415 PF14489 QueF-like protein NA29_RS13430 PF12833 Helix-turn-helix domain NA29_RS13430 PF02311 AraC-like ligand binding domain NA29_RS13435 PF04397 LytTr DNA-binding domain NA29_RS13435 PF00072 Response regulator receiver domain NA29_RS13440 PF06580 Histidine kinase NA29_RS13440 PF07694 5TMR of 5TMR-LYT NA29_RS13440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS13450 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS13450 PF02861 Clp amino terminal domain, pathogenicity island component NA29_RS13450 PF17871 AAA lid domain NA29_RS13450 PF07724 AAA domain (Cdc48 subfamily) NA29_RS13450 PF10431 C-terminal, D2-small domain, of ClpB protein NA29_RS13460 PF02391 MoaE protein NA29_RS13465 PF02597 ThiS family NA29_RS13470 PF00994 Probable molybdopterin binding domain NA29_RS13470 PF03454 MoeA C-terminal region (domain IV) NA29_RS13470 PF03453 MoeA N-terminal region (domain I and II) NA29_RS13475 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS13475 PF14821 Threonine synthase N terminus NA29_RS13480 PF03447 Homoserine dehydrogenase, NAD binding domain NA29_RS13480 PF00742 Homoserine dehydrogenase NA29_RS13480 PF01842 ACT domain NA29_RS13485 PF00155 Aminotransferase class I and II NA29_RS13495 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NA29_RS13505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NA29_RS13510 PF00535 Glycosyl transferase family 2 NA29_RS13515 PF01370 NAD dependent epimerase/dehydratase family NA29_RS13515 PF00551 Formyl transferase NA29_RS13515 PF02911 Formyl transferase, C-terminal domain NA29_RS13520 PF00551 Formyl transferase NA29_RS13520 PF02911 Formyl transferase, C-terminal domain NA29_RS13520 PF01370 NAD dependent epimerase/dehydratase family NA29_RS13525 PF01522 Polysaccharide deacetylase NA29_RS13530 PF00578 AhpC/TSA family NA29_RS13535 PF13638 PIN domain NA29_RS13535 PF02562 PhoH-like protein NA29_RS13540 PF00877 NlpC/P60 family NA29_RS13550 PF01384 Phosphate transporter family NA29_RS13560 PF03796 DnaB-like helicase C terminal domain NA29_RS13560 PF00772 DnaB-like helicase N terminal domain NA29_RS13565 PF01281 Ribosomal protein L9, N-terminal domain NA29_RS13565 PF03948 Ribosomal protein L9, C-terminal domain NA29_RS13570 PF01084 Ribosomal protein S18 NA29_RS13580 PF01250 Ribosomal protein S6 NA29_RS13585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS13585 PF03466 LysR substrate binding domain NA29_RS13590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS13590 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS13590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS13595 PF01261 Xylose isomerase-like TIM barrel NA29_RS13600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NA29_RS13600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NA29_RS13605 PF17763 Glutaminase/Asparaginase C-terminal domain NA29_RS13605 PF00710 Asparaginase, N-terminal NA29_RS13610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS13610 PF03466 LysR substrate binding domain NA29_RS13615 PF00005 ABC transporter NA29_RS13615 PF12857 TOBE-like domain NA29_RS13620 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS13625 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS13640 PF01494 FAD binding domain NA29_RS13655 PF00529 HlyD membrane-fusion protein of T1SS NA29_RS13655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NA29_RS13660 PF00873 AcrB/AcrD/AcrF family NA29_RS13670 PF00717 Peptidase S24-like NA29_RS13670 PF01726 LexA DNA binding domain NA29_RS13685 PF00679 Elongation factor G C-terminus NA29_RS13685 PF00009 Elongation factor Tu GTP binding domain NA29_RS13685 PF03144 Elongation factor Tu domain 2 NA29_RS13695 PF02321 Outer membrane efflux protein NA29_RS13700 PF00529 HlyD membrane-fusion protein of T1SS NA29_RS13700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NA29_RS13705 PF07690 Major Facilitator Superfamily NA29_RS13730 PF00313 'Cold-shock' DNA-binding domain NA29_RS13735 PF09157 Pseudouridine synthase II TruB, C-terminal NA29_RS13735 PF16198 tRNA pseudouridylate synthase B C-terminal domain NA29_RS13735 PF01509 TruB family pseudouridylate synthase (N terminal domain) NA29_RS13740 PF02033 Ribosome-binding factor A NA29_RS13745 PF11987 Translation-initiation factor 2 NA29_RS13745 PF00009 Elongation factor Tu GTP binding domain NA29_RS13745 PF04760 Translation initiation factor IF-2, N-terminal region NA29_RS13745 PF08364 Bacterial translation initiation factor IF-2 associated region NA29_RS13750 PF13184 NusA-like KH domain NA29_RS13750 PF08529 NusA N-terminal domain NA29_RS13755 PF17384 RimP C-terminal SH3 domain NA29_RS13755 PF02576 RimP N-terminal domain NA29_RS13760 PF01479 S4 domain NA29_RS13760 PF00849 RNA pseudouridylate synthase NA29_RS13765 PF04079 Segregation and condensation complex subunit ScpB NA29_RS13770 PF13545 Crp-like helix-turn-helix domain NA29_RS13770 PF00027 Cyclic nucleotide-binding domain NA29_RS13780 PF03466 LysR substrate binding domain NA29_RS13780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS13785 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS13785 PF00107 Zinc-binding dehydrogenase NA29_RS13790 PF18146 Damage-inducible protein CinA KH domain NA29_RS13790 PF00994 Probable molybdopterin binding domain NA29_RS13790 PF02464 Competence-damaged protein NA29_RS13805 PF11898 Domain of unknown function (DUF3418) NA29_RS13805 PF00270 DEAD/DEAH box helicase NA29_RS13805 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NA29_RS13805 PF00271 Helicase conserved C-terminal domain NA29_RS13805 PF04408 Helicase associated domain (HA2) NA29_RS13810 PF00583 Acetyltransferase (GNAT) family NA29_RS13810 PF00696 Amino acid kinase family NA29_RS13815 PF04362 Bacterial Fe(2+) trafficking NA29_RS13825 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NA29_RS13830 PF00923 Transaldolase/Fructose-6-phosphate aldolase NA29_RS13845 PF08032 RNA 2'-O ribose methyltransferase substrate binding NA29_RS13845 PF00588 SpoU rRNA Methylase family NA29_RS13850 PF08461 Ribonuclease R winged-helix domain NA29_RS13850 PF17876 Cold shock domain NA29_RS13850 PF08206 Ribonuclease B OB domain NA29_RS13850 PF00773 RNB domain NA29_RS13850 PF00575 S1 RNA binding domain NA29_RS13865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS13865 PF03466 LysR substrate binding domain NA29_RS13880 PF12833 Helix-turn-helix domain NA29_RS13880 PF12852 Cupin NA29_RS13895 PF00005 ABC transporter NA29_RS13905 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS13910 PF00849 RNA pseudouridylate synthase NA29_RS13910 PF01479 S4 domain NA29_RS13915 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NA29_RS13920 PF03352 Methyladenine glycosylase NA29_RS13930 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS13940 PF00392 Bacterial regulatory proteins, gntR family NA29_RS13940 PF07729 FCD domain NA29_RS13945 PF01699 Sodium/calcium exchanger protein NA29_RS13960 PF00677 Lumazine binding domain NA29_RS13980 PF04321 RmlD substrate binding domain NA29_RS13985 PF00158 Sigma-54 interaction domain NA29_RS13985 PF00072 Response regulator receiver domain NA29_RS13985 PF02954 Bacterial regulatory protein, Fis family NA29_RS13990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS13990 PF00989 PAS fold NA29_RS13990 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS13995 PF03951 Glutamine synthetase, beta-Grasp domain NA29_RS13995 PF00120 Glutamine synthetase, catalytic domain NA29_RS14005 PF01810 LysE type translocator NA29_RS14060 PF02203 Tar ligand binding domain homologue NA29_RS14060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS14060 PF00672 HAMP domain NA29_RS14065 PF14492 Elongation Factor G, domain II NA29_RS14065 PF03144 Elongation factor Tu domain 2 NA29_RS14065 PF03764 Elongation factor G, domain IV NA29_RS14065 PF00009 Elongation factor Tu GTP binding domain NA29_RS14065 PF00679 Elongation factor G C-terminus NA29_RS14070 PF08543 Phosphomethylpyrimidine kinase NA29_RS14075 PF00756 Putative esterase NA29_RS14085 PF00704 Glycosyl hydrolases family 18 NA29_RS14115 PF03547 Membrane transport protein NA29_RS14120 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS14125 PF00313 'Cold-shock' DNA-binding domain NA29_RS14130 PF02222 ATP-grasp domain NA29_RS14140 PF00106 short chain dehydrogenase NA29_RS14145 PF00743 Flavin-binding monooxygenase-like NA29_RS14150 PF00561 alpha/beta hydrolase fold NA29_RS14190 PF00313 'Cold-shock' DNA-binding domain NA29_RS14210 PF01207 Dihydrouridine synthase (Dus) NA29_RS14215 PF00892 EamA-like transporter family NA29_RS14220 PF13673 Acetyltransferase (GNAT) domain NA29_RS14230 PF09297 NADH pyrophosphatase zinc ribbon domain NA29_RS14230 PF00293 NUDIX domain NA29_RS14235 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NA29_RS14240 PF04377 Arginine-tRNA-protein transferase, C terminus NA29_RS14240 PF04376 Arginine-tRNA-protein transferase, N terminus NA29_RS14245 PF01180 Dihydroorotate dehydrogenase NA29_RS14250 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS14255 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS14260 PF11870 Domain of unknown function (DUF3390) NA29_RS14260 PF13183 4Fe-4S dicluster domain NA29_RS14260 PF02589 LUD domain NA29_RS14265 PF02754 Cysteine-rich domain NA29_RS14275 PF09339 IclR helix-turn-helix domain NA29_RS14275 PF01614 Bacterial transcriptional regulator NA29_RS14280 PF00768 D-alanyl-D-alanine carboxypeptidase NA29_RS14285 PF00881 Nitroreductase family NA29_RS14290 PF00892 EamA-like transporter family NA29_RS14295 PF00850 Histone deacetylase domain NA29_RS14300 PF09361 Phasin protein NA29_RS14305 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS14305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NA29_RS14310 PF00227 Proteasome subunit NA29_RS14315 PF02817 e3 binding domain NA29_RS14315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NA29_RS14315 PF00364 Biotin-requiring enzyme NA29_RS14320 PF00456 Transketolase, thiamine diphosphate binding domain NA29_RS14320 PF17831 Pyruvate dehydrogenase E1 component middle domain NA29_RS14325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS14325 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS14325 PF00989 PAS fold NA29_RS14330 PF00072 Response regulator receiver domain NA29_RS14330 PF00196 Bacterial regulatory proteins, luxR family NA29_RS14335 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NA29_RS14335 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NA29_RS14340 PF01432 Peptidase family M3 NA29_RS14350 PF00156 Phosphoribosyl transferase domain NA29_RS14355 PF00709 Adenylosuccinate synthetase NA29_RS14360 PF13393 Histidyl-tRNA synthetase NA29_RS14365 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NA29_RS14370 PF01145 SPFH domain / Band 7 family NA29_RS14375 PF01145 SPFH domain / Band 7 family NA29_RS14375 PF12221 Bacterial membrane protein N terminal NA29_RS14380 PF13167 GTP-binding GTPase N-terminal NA29_RS14380 PF01926 50S ribosome-binding GTPase NA29_RS14380 PF16360 GTP-binding GTPase Middle Region NA29_RS14385 PF17209 Hfq protein NA29_RS14390 PF01926 50S ribosome-binding GTPase NA29_RS14390 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NA29_RS14395 PF13360 PQQ-like domain NA29_RS14400 PF09976 Tetratricopeptide repeat-like domain NA29_RS14405 PF03129 Anticodon binding domain NA29_RS14405 PF13393 Histidyl-tRNA synthetase NA29_RS14410 PF04551 GcpE protein NA29_RS14420 PF04055 Radical SAM superfamily NA29_RS14425 PF00334 Nucleoside diphosphate kinase NA29_RS14430 PF01027 Inhibitor of apoptosis-promoting Bax1 NA29_RS14435 PF05958 tRNA (Uracil-5-)-methyltransferase NA29_RS14445 PF00140 Sigma-70 factor, region 1.2 NA29_RS14445 PF04545 Sigma-70, region 4 NA29_RS14445 PF04539 Sigma-70 region 3 NA29_RS14445 PF04542 Sigma-70 region 2 NA29_RS14450 PF01476 LysM domain NA29_RS14450 PF01551 Peptidase family M23 NA29_RS14460 PF01975 Survival protein SurE NA29_RS14465 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS14470 PF00005 ABC transporter NA29_RS14475 PF09084 NMT1/THI5 like NA29_RS14480 PF02515 CoA-transferase family III NA29_RS14485 PF00196 Bacterial regulatory proteins, luxR family NA29_RS14530 PF00072 Response regulator receiver domain NA29_RS14530 PF02954 Bacterial regulatory protein, Fis family NA29_RS14530 PF00158 Sigma-54 interaction domain NA29_RS14535 PF02132 RecR protein NA29_RS14535 PF13662 Toprim domain NA29_RS14540 PF02575 YbaB/EbfC DNA-binding family NA29_RS14545 PF12169 DNA polymerase III subunits gamma and tau domain III NA29_RS14545 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NA29_RS14545 PF12170 DNA polymerase III tau subunit V interacting with alpha NA29_RS14555 PF00085 Thioredoxin NA29_RS14560 PF07498 Rho termination factor, N-terminal domain NA29_RS14560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NA29_RS14560 PF07497 Rho termination factor, RNA-binding domain NA29_RS14570 PF13416 Bacterial extracellular solute-binding protein NA29_RS14575 PF01734 Patatin-like phospholipase NA29_RS14580 PF00877 NlpC/P60 family NA29_RS14585 PF00005 ABC transporter NA29_RS14585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS14590 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS14590 PF12911 N-terminal TM domain of oligopeptide transport permease C NA29_RS14595 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS14600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NA29_RS14610 PF07690 Major Facilitator Superfamily NA29_RS14615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NA29_RS14625 PF01842 ACT domain NA29_RS14625 PF00696 Amino acid kinase family NA29_RS14625 PF13840 ACT domain NA29_RS14630 PF01171 PP-loop family NA29_RS14630 PF09179 TilS substrate binding domain NA29_RS14630 PF11734 TilS substrate C-terminal domain NA29_RS14635 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NA29_RS14640 PF00730 HhH-GPD superfamily base excision DNA repair protein NA29_RS14645 PF01406 tRNA synthetases class I (C) catalytic domain NA29_RS14645 PF09190 DALR domain NA29_RS14655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NA29_RS14660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NA29_RS14665 PF00149 Calcineurin-like phosphoesterase NA29_RS14670 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS14675 PF00588 SpoU rRNA Methylase family NA29_RS14680 PF00459 Inositol monophosphatase family NA29_RS14685 PF00749 tRNA synthetases class I (E and Q), catalytic domain NA29_RS14695 PF00005 ABC transporter NA29_RS14700 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS14705 PF00296 Luciferase-like monooxygenase NA29_RS14710 PF03358 NADPH-dependent FMN reductase NA29_RS14715 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NA29_RS14715 PF12833 Helix-turn-helix domain NA29_RS14720 PF01588 Putative tRNA binding domain NA29_RS14720 PF09334 tRNA synthetases class I (M) NA29_RS14725 PF00884 Sulfatase NA29_RS14735 PF00155 Aminotransferase class I and II NA29_RS14740 PF01053 Cys/Met metabolism PLP-dependent enzyme NA29_RS14745 PF00156 Phosphoribosyl transferase domain NA29_RS14760 PF02875 Mur ligase family, glutamate ligase domain NA29_RS14760 PF08245 Mur ligase middle domain NA29_RS14765 PF17848 Acetyl-coA carboxylase zinc finger domain NA29_RS14765 PF01039 Carboxyl transferase domain NA29_RS14770 PF00290 Tryptophan synthase alpha chain NA29_RS14775 PF01555 DNA methylase NA29_RS14780 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS14785 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NA29_RS14790 PF01416 tRNA pseudouridine synthase NA29_RS14800 PF01118 Semialdehyde dehydrogenase, NAD binding domain NA29_RS14800 PF02774 Semialdehyde dehydrogenase, dimerisation domain NA29_RS14805 PF00180 Isocitrate/isopropylmalate dehydrogenase NA29_RS14810 PF00694 Aconitase C-terminal domain NA29_RS14820 PF00330 Aconitase family (aconitate hydratase) NA29_RS14825 PF00285 Citrate synthase, C-terminal domain NA29_RS14830 PF03937 Flavinator of succinate dehydrogenase NA29_RS14835 PF13085 2Fe-2S iron-sulfur cluster binding domain NA29_RS14840 PF02910 Fumarate reductase flavoprotein C-term NA29_RS14840 PF00890 FAD binding domain NA29_RS14855 PF00392 Bacterial regulatory proteins, gntR family NA29_RS14855 PF07702 UTRA domain NA29_RS14860 PF00056 lactate/malate dehydrogenase, NAD binding domain NA29_RS14860 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NA29_RS14870 PF00694 Aconitase C-terminal domain NA29_RS14870 PF00330 Aconitase family (aconitate hydratase) NA29_RS14875 PF12833 Helix-turn-helix domain NA29_RS14875 PF02805 Metal binding domain of Ada NA29_RS14875 PF06029 AlkA N-terminal domain NA29_RS14875 PF00730 HhH-GPD superfamily base excision DNA repair protein NA29_RS14880 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NA29_RS14880 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NA29_RS14905 PF18027 Cytosolic carboxypeptidase N-terminal domain NA29_RS14905 PF00246 Zinc carboxypeptidase NA29_RS14910 PF03883 Peroxide stress protein YaaA NA29_RS14920 PF00155 Aminotransferase class I and II NA29_RS14925 PF14497 Glutathione S-transferase, C-terminal domain NA29_RS14925 PF13417 Glutathione S-transferase, N-terminal domain NA29_RS14930 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NA29_RS14930 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NA29_RS14930 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NA29_RS14935 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS14950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS14950 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS14950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS14955 PF00043 Glutathione S-transferase, C-terminal domain NA29_RS14955 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS14960 PF07411 Domain of unknown function (DUF1508) NA29_RS14985 PF01575 MaoC like domain NA29_RS15000 PF00293 NUDIX domain NA29_RS15010 PF00361 Proton-conducting membrane transporter NA29_RS15015 PF00361 Proton-conducting membrane transporter NA29_RS15015 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NA29_RS15020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NA29_RS15020 PF00361 Proton-conducting membrane transporter NA29_RS15025 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NA29_RS15030 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NA29_RS15035 PF12838 4Fe-4S dicluster domain NA29_RS15040 PF00146 NADH dehydrogenase NA29_RS15045 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal NA29_RS15045 PF00384 Molybdopterin oxidoreductase NA29_RS15045 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NA29_RS15050 PF10531 SLBB domain NA29_RS15050 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NA29_RS15050 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NA29_RS15060 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NA29_RS15065 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NA29_RS15070 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NA29_RS15075 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NA29_RS15085 PF03840 Preprotein translocase SecG subunit NA29_RS15090 PF00121 Triosephosphate isomerase NA29_RS15095 PF00107 Zinc-binding dehydrogenase NA29_RS15095 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS15105 PF05231 MASE1 NA29_RS15105 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS15105 PF00563 EAL domain NA29_RS15105 PF13426 PAS domain NA29_RS15105 PF08447 PAS fold NA29_RS15105 PF08448 PAS fold NA29_RS15110 PF01624 MutS domain I NA29_RS15110 PF05192 MutS domain III NA29_RS15110 PF05190 MutS family domain IV NA29_RS15110 PF00488 MutS domain V NA29_RS15110 PF05188 MutS domain II NA29_RS15120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NA29_RS15125 PF08007 Cupin superfamily protein NA29_RS15140 PF06804 NlpB/DapX lipoprotein NA29_RS15145 PF00701 Dihydrodipicolinate synthetase family NA29_RS15150 PF08241 Methyltransferase domain NA29_RS15155 PF00579 tRNA synthetases class I (W and Y) NA29_RS15160 PF02163 Peptidase family M50 NA29_RS15165 PF01300 Telomere recombination NA29_RS15170 PF02811 PHP domain NA29_RS15175 PF12697 Alpha/beta hydrolase family NA29_RS15180 PF04305 Protein of unknown function (DUF455) NA29_RS15185 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS15190 PF01430 Hsp33 protein NA29_RS15200 PF04977 Septum formation initiator NA29_RS15205 PF03952 Enolase, N-terminal domain NA29_RS15205 PF00113 Enolase, C-terminal TIM barrel domain NA29_RS15210 PF00793 DAHP synthetase I family NA29_RS15215 PF00117 Glutamine amidotransferase class-I NA29_RS15215 PF06418 CTP synthase N-terminus NA29_RS15220 PF00561 alpha/beta hydrolase fold NA29_RS15220 PF08386 TAP-like protein NA29_RS15225 PF00753 Metallo-beta-lactamase superfamily NA29_RS15225 PF03772 Competence protein NA29_RS15230 PF01026 TatD related DNase NA29_RS15235 PF00005 ABC transporter NA29_RS15240 PF02687 FtsX-like permease family NA29_RS15240 PF12704 MacB-like periplasmic core domain NA29_RS15250 PF17768 RecJ OB domain NA29_RS15250 PF01368 DHH family NA29_RS15250 PF02272 DHHA1 domain NA29_RS15260 PF00593 TonB dependent receptor NA29_RS15260 PF07715 TonB-dependent Receptor Plug Domain NA29_RS15270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15270 PF03466 LysR substrate binding domain NA29_RS15290 PF00152 tRNA synthetases class II (D, K and N) NA29_RS15290 PF01336 OB-fold nucleic acid binding domain NA29_RS15315 PF04384 Iron-sulphur cluster assembly NA29_RS15320 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS15325 PF00012 Hsp70 protein NA29_RS15330 PF07743 HSCB C-terminal oligomerisation domain NA29_RS15340 PF01521 Iron-sulphur cluster biosynthesis NA29_RS15345 PF01592 NifU-like N terminal domain NA29_RS15350 PF00266 Aminotransferase class-V NA29_RS15355 PF02082 Transcriptional regulator NA29_RS15365 PF01451 Low molecular weight phosphotyrosine protein phosphatase NA29_RS15370 PF12344 Ultra-violet resistance protein B NA29_RS15370 PF02151 UvrB/uvrC motif NA29_RS15370 PF00271 Helicase conserved C-terminal domain NA29_RS15370 PF17757 UvrB interaction domain NA29_RS15370 PF04851 Type III restriction enzyme, res subunit NA29_RS15375 PF00155 Aminotransferase class I and II NA29_RS15385 PF17938 Tetracyclin repressor-like, C-terminal domain NA29_RS15385 PF00440 Bacterial regulatory proteins, tetR family NA29_RS15390 PF04060 Putative Fe-S cluster NA29_RS15395 PF00633 Helix-hairpin-helix motif NA29_RS15395 PF00730 HhH-GPD superfamily base excision DNA repair protein NA29_RS15395 PF10576 Iron-sulfur binding domain of endonuclease III NA29_RS15400 PF00881 Nitroreductase family NA29_RS15405 PF00892 EamA-like transporter family NA29_RS15420 PF00034 Cytochrome c NA29_RS15425 PF17862 AAA+ lid domain NA29_RS15425 PF01434 Peptidase family M41 NA29_RS15425 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS15435 PF03594 Benzoate membrane transport protein NA29_RS15455 PF04345 Chorismate lyase NA29_RS15460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS15460 PF00183 Hsp90 protein NA29_RS15465 PF00155 Aminotransferase class I and II NA29_RS15465 PF00392 Bacterial regulatory proteins, gntR family NA29_RS15480 PF00892 EamA-like transporter family NA29_RS15485 PF00155 Aminotransferase class I and II NA29_RS15495 PF07690 Major Facilitator Superfamily NA29_RS15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15500 PF03466 LysR substrate binding domain NA29_RS15510 PF00521 DNA gyrase/topoisomerase IV, subunit A NA29_RS15515 PF01464 Transglycosylase SLT domain NA29_RS15525 PF00204 DNA gyrase B NA29_RS15525 PF01751 Toprim domain NA29_RS15525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS15525 PF00986 DNA gyrase B subunit, carboxyl terminus NA29_RS15530 PF00005 ABC transporter NA29_RS15530 PF12848 ABC transporter NA29_RS15530 PF16326 ABC transporter C-terminal domain NA29_RS15535 PF13673 Acetyltransferase (GNAT) domain NA29_RS15555 PF00749 tRNA synthetases class I (E and Q), catalytic domain NA29_RS15555 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NA29_RS15565 PF00875 DNA photolyase NA29_RS15565 PF03441 FAD binding domain of DNA photolyase NA29_RS15575 PF02308 MgtC family NA29_RS15580 PF11799 impB/mucB/samB family C-terminal domain NA29_RS15580 PF00817 impB/mucB/samB family NA29_RS15590 PF02515 CoA-transferase family III NA29_RS15595 PF02515 CoA-transferase family III NA29_RS15600 PF00330 Aconitase family (aconitate hydratase) NA29_RS15605 PF00694 Aconitase C-terminal domain NA29_RS15610 PF09084 NMT1/THI5 like NA29_RS15615 PF03466 LysR substrate binding domain NA29_RS15615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15620 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS15625 PF00005 ABC transporter NA29_RS15625 PF08402 TOBE domain NA29_RS15630 PF00303 Thymidylate synthase NA29_RS15635 PF00186 Dihydrofolate reductase NA29_RS15640 PF00563 EAL domain NA29_RS15640 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS15640 PF00360 Phytochrome region NA29_RS15640 PF01590 GAF domain NA29_RS15645 PF00005 ABC transporter NA29_RS15650 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS15650 PF00005 ABC transporter NA29_RS15655 PF11862 Domain of unknown function (DUF3382) NA29_RS15655 PF02653 Branched-chain amino acid transport system / permease component NA29_RS15660 PF02653 Branched-chain amino acid transport system / permease component NA29_RS15665 PF13458 Periplasmic binding protein NA29_RS15670 PF01523 Putative modulator of DNA gyrase NA29_RS15675 PF04751 Protein of unknown function (DUF615) NA29_RS15680 PF00994 Probable molybdopterin binding domain NA29_RS15685 PF00929 Exonuclease NA29_RS15690 PF01435 Peptidase family M48 NA29_RS15690 PF16491 CAAX prenyl protease N-terminal, five membrane helices NA29_RS15695 PF03193 RsgA GTPase NA29_RS15700 PF03186 CobD/Cbib protein NA29_RS15700 PF17113 Regulatory signalling modulator protein AmpE NA29_RS15705 PF00293 NUDIX domain NA29_RS15710 PF01245 Ribosomal protein L19 NA29_RS15715 PF01746 tRNA (Guanine-1)-methyltransferase NA29_RS15720 PF05239 PRC-barrel domain NA29_RS15720 PF01782 RimM N-terminal domain NA29_RS15725 PF00886 Ribosomal protein S16 NA29_RS15730 PF07995 Glucose / Sorbosone dehydrogenase NA29_RS15750 PF04055 Radical SAM superfamily NA29_RS15755 PF01037 Lrp/AsnC ligand binding domain NA29_RS15760 PF01266 FAD dependent oxidoreductase NA29_RS15765 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NA29_RS15765 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NA29_RS15775 PF13419 Haloacid dehalogenase-like hydrolase NA29_RS15795 PF01810 LysE type translocator NA29_RS15800 PF03466 LysR substrate binding domain NA29_RS15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15815 PF00034 Cytochrome c NA29_RS15815 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS15820 PF00732 GMC oxidoreductase NA29_RS15820 PF05199 GMC oxidoreductase NA29_RS15825 PF13618 Gluconate 2-dehydrogenase subunit 3 NA29_RS15850 PF07690 Major Facilitator Superfamily NA29_RS15855 PF00175 Oxidoreductase NAD-binding domain NA29_RS15855 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NA29_RS15860 PF01180 Dihydroorotate dehydrogenase NA29_RS15865 PF07687 Peptidase dimerisation domain NA29_RS15865 PF01546 Peptidase family M20/M25/M40 NA29_RS15885 PF01223 DNA/RNA non-specific endonuclease NA29_RS15895 PF04299 Putative FMN-binding domain NA29_RS15920 PF00156 Phosphoribosyl transferase domain NA29_RS15920 PF01738 Dienelactone hydrolase family NA29_RS15935 PF01614 Bacterial transcriptional regulator NA29_RS15935 PF09339 IclR helix-turn-helix domain NA29_RS15940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NA29_RS15940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NA29_RS15945 PF03061 Thioesterase superfamily NA29_RS15950 PF01618 MotA/TolQ/ExbB proton channel family NA29_RS15955 PF02472 Biopolymer transport protein ExbD/TolR NA29_RS15965 PF07676 WD40-like Beta Propeller Repeat NA29_RS15965 PF04052 TolB amino-terminal domain NA29_RS15970 PF00691 OmpA family NA29_RS15990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS15990 PF03466 LysR substrate binding domain NA29_RS16000 PF03466 LysR substrate binding domain NA29_RS16000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS16005 PF00107 Zinc-binding dehydrogenase NA29_RS16005 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS16020 PF03466 LysR substrate binding domain NA29_RS16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS16055 PF00459 Inositol monophosphatase family NA29_RS16065 PF00356 Bacterial regulatory proteins, lacI family NA29_RS16070 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS16075 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS16080 PF01547 Bacterial extracellular solute-binding protein NA29_RS16090 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NA29_RS16090 PF00361 Proton-conducting membrane transporter NA29_RS16110 PF07690 Major Facilitator Superfamily NA29_RS16115 PF01380 SIS domain NA29_RS16120 PF01037 Lrp/AsnC ligand binding domain NA29_RS16125 PF00455 DeoR C terminal sensor domain NA29_RS16125 PF08220 DeoR-like helix-turn-helix domain NA29_RS16130 PF03009 Glycerophosphoryl diester phosphodiesterase family NA29_RS16135 PF13609 Gram-negative porin NA29_RS16140 PF12852 Cupin NA29_RS16140 PF12833 Helix-turn-helix domain NA29_RS16150 PF02082 Transcriptional regulator NA29_RS16160 PF00689 Cation transporting ATPase, C-terminus NA29_RS16160 PF00690 Cation transporter/ATPase, N-terminus NA29_RS16170 PF04542 Sigma-70 region 2 NA29_RS16170 PF08281 Sigma-70, region 4 NA29_RS16175 PF16220 Domain of unknown function (DUF4880) NA29_RS16175 PF04773 FecR protein NA29_RS16180 PF07715 TonB-dependent Receptor Plug Domain NA29_RS16180 PF00593 TonB dependent receptor NA29_RS16205 PF00925 GTP cyclohydrolase II NA29_RS16210 PF00593 TonB dependent receptor NA29_RS16210 PF07715 TonB-dependent Receptor Plug Domain NA29_RS16210 PF07660 Secretin and TonB N terminus short domain NA29_RS16220 PF00005 ABC transporter NA29_RS16225 PF00005 ABC transporter NA29_RS16225 PF00664 ABC transporter transmembrane region NA29_RS16230 PF01032 FecCD transport family NA29_RS16250 PF01212 Beta-eliminating lyase NA29_RS16255 PF00375 Sodium:dicarboxylate symporter family NA29_RS16260 PF00392 Bacterial regulatory proteins, gntR family NA29_RS16260 PF07729 FCD domain NA29_RS16265 PF00561 alpha/beta hydrolase fold NA29_RS16270 PF01810 LysE type translocator NA29_RS16275 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS16280 PF03466 LysR substrate binding domain NA29_RS16280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS16290 PF00009 Elongation factor Tu GTP binding domain NA29_RS16290 PF09107 Elongation factor SelB, winged helix NA29_RS16290 PF03144 Elongation factor Tu domain 2 NA29_RS16290 PF09106 Elongation factor SelB, winged helix NA29_RS16295 PF03841 L-seryl-tRNA selenium transferase NA29_RS16295 PF12390 Selenocysteine synthase N terminal NA29_RS16300 PF04216 Protein involved in formate dehydrogenase formation NA29_RS16305 PF01292 Prokaryotic cytochrome b561 NA29_RS16310 PF09163 Formate dehydrogenase N, transmembrane NA29_RS16310 PF13247 4Fe-4S dicluster domain NA29_RS16320 PF00384 Molybdopterin oxidoreductase NA29_RS16320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS16320 PF01568 Molydopterin dinucleotide binding domain NA29_RS16330 PF04403 Paraquat-inducible protein A NA29_RS16335 PF02470 MlaD protein NA29_RS16345 PF01810 LysE type translocator NA29_RS16355 PF07690 Major Facilitator Superfamily NA29_RS16370 PF07729 FCD domain NA29_RS16370 PF00392 Bacterial regulatory proteins, gntR family NA29_RS16375 PF00723 Glycosyl hydrolases family 15 NA29_RS16380 PF02515 CoA-transferase family III NA29_RS16385 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS16390 PF00392 Bacterial regulatory proteins, gntR family NA29_RS16390 PF07729 FCD domain NA29_RS16395 PF00392 Bacterial regulatory proteins, gntR family NA29_RS16395 PF07729 FCD domain NA29_RS16405 PF07690 Major Facilitator Superfamily NA29_RS16410 PF03466 LysR substrate binding domain NA29_RS16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS16415 PF02233 NAD(P) transhydrogenase beta subunit NA29_RS16420 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NA29_RS16425 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NA29_RS16425 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NA29_RS16430 PF13419 Haloacid dehalogenase-like hydrolase NA29_RS16440 PF03466 LysR substrate binding domain NA29_RS16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS16450 PF02515 CoA-transferase family III NA29_RS16455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS16455 PF00989 PAS fold NA29_RS16455 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS16460 PF02515 CoA-transferase family III NA29_RS16465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS16465 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS16465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS16470 PF07690 Major Facilitator Superfamily NA29_RS16475 PF02558 Ketopantoate reductase PanE/ApbA NA29_RS16475 PF08546 Ketopantoate reductase PanE/ApbA C terminal NA29_RS16480 PF00392 Bacterial regulatory proteins, gntR family NA29_RS16480 PF07729 FCD domain NA29_RS16490 PF00037 4Fe-4S binding domain NA29_RS16490 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NA29_RS16490 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NA29_RS16495 PF00384 Molybdopterin oxidoreductase NA29_RS16495 PF01568 Molydopterin dinucleotide binding domain NA29_RS16495 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NA29_RS16495 PF12838 4Fe-4S dicluster domain NA29_RS16495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS16525 PF00155 Aminotransferase class I and II NA29_RS16530 PF02080 TrkA-C domain NA29_RS16530 PF06826 Predicted Permease Membrane Region NA29_RS16535 PF06826 Predicted Permease Membrane Region NA29_RS16535 PF02080 TrkA-C domain NA29_RS16545 PF01554 MatE NA29_RS16550 PF00459 Inositol monophosphatase family NA29_RS16565 PF00582 Universal stress protein family NA29_RS16570 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS16575 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS16580 PF13416 Bacterial extracellular solute-binding protein NA29_RS16585 PF00005 ABC transporter NA29_RS16585 PF08402 TOBE domain NA29_RS16605 PF03576 Peptidase family S58 NA29_RS16610 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS16610 PF12911 N-terminal TM domain of oligopeptide transport permease C NA29_RS16615 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS16620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NA29_RS16625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS16625 PF00005 ABC transporter NA29_RS16630 PF01112 Asparaginase NA29_RS16645 PF02325 YGGT family NA29_RS16650 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS16655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS16655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS16655 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS16660 PF13193 AMP-binding enzyme C-terminal domain NA29_RS16660 PF00501 AMP-binding enzyme NA29_RS16665 PF00106 short chain dehydrogenase NA29_RS16670 PF12833 Helix-turn-helix domain NA29_RS16670 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NA29_RS16675 PF07690 Major Facilitator Superfamily NA29_RS16680 PF13609 Gram-negative porin NA29_RS16685 PF01614 Bacterial transcriptional regulator NA29_RS16685 PF09339 IclR helix-turn-helix domain NA29_RS16700 PF01012 Electron transfer flavoprotein domain NA29_RS16700 PF00766 Electron transfer flavoprotein FAD-binding domain NA29_RS16705 PF01012 Electron transfer flavoprotein domain NA29_RS16710 PF07690 Major Facilitator Superfamily NA29_RS16715 PF04909 Amidohydrolase NA29_RS16720 PF02913 FAD linked oxidases, C-terminal domain NA29_RS16720 PF01565 FAD binding domain NA29_RS16725 PF07729 FCD domain NA29_RS16725 PF00392 Bacterial regulatory proteins, gntR family NA29_RS16735 PF00909 Ammonium Transporter Family NA29_RS16790 PF01614 Bacterial transcriptional regulator NA29_RS16790 PF09339 IclR helix-turn-helix domain NA29_RS16795 PF07836 DmpG-like communication domain NA29_RS16795 PF00682 HMGL-like NA29_RS16800 PF01118 Semialdehyde dehydrogenase, NAD binding domain NA29_RS16800 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation NA29_RS16805 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP NA29_RS16810 PF07690 Major Facilitator Superfamily NA29_RS16825 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS16830 PF03551 Transcriptional regulator PadR-like family NA29_RS16835 PF08021 Siderophore-interacting FAD-binding domain NA29_RS16835 PF04954 Siderophore-interacting protein NA29_RS16845 PF00106 short chain dehydrogenase NA29_RS16865 PF00483 Nucleotidyl transferase NA29_RS16875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS16875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS16880 PF00266 Aminotransferase class-V NA29_RS16885 PF02780 Transketolase, C-terminal domain NA29_RS16885 PF02779 Transketolase, pyrimidine binding domain NA29_RS16885 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NA29_RS16900 PF02401 LytB protein NA29_RS16905 PF04055 Radical SAM superfamily NA29_RS16910 PF01370 NAD dependent epimerase/dehydratase family NA29_RS16915 PF00535 Glycosyl transferase family 2 NA29_RS16925 PF13249 Squalene-hopene cyclase N-terminal domain NA29_RS16925 PF13243 Squalene-hopene cyclase C-terminal domain NA29_RS16930 PF01593 Flavin containing amine oxidoreductase NA29_RS16950 PF03060 Nitronate monooxygenase NA29_RS16970 PF00510 Cytochrome c oxidase subunit III NA29_RS16975 PF00115 Cytochrome C and Quinol oxidase polypeptide I NA29_RS16980 PF06481 COX Aromatic Rich Motif NA29_RS16980 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NA29_RS16990 PF00486 Transcriptional regulatory protein, C terminal NA29_RS16990 PF00072 Response regulator receiver domain NA29_RS16995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS16995 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS16995 PF16736 Single Cache-like NA29_RS16995 PF00989 PAS fold NA29_RS17010 PF03466 LysR substrate binding domain NA29_RS17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17025 PF07883 Cupin domain NA29_RS17035 PF02321 Outer membrane efflux protein NA29_RS17040 PF00005 ABC transporter NA29_RS17040 PF12704 MacB-like periplasmic core domain NA29_RS17040 PF02687 FtsX-like permease family NA29_RS17045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NA29_RS17050 PF03458 UPF0126 domain NA29_RS17060 PF00285 Citrate synthase, C-terminal domain NA29_RS17065 PF07690 Major Facilitator Superfamily NA29_RS17070 PF09084 NMT1/THI5 like NA29_RS17075 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS17090 PF02667 Short chain fatty acid transporter NA29_RS17095 PF02423 Ornithine cyclodeaminase/mu-crystallin family NA29_RS17100 PF00384 Molybdopterin oxidoreductase NA29_RS17100 PF01568 Molydopterin dinucleotide binding domain NA29_RS17100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS17105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17105 PF03466 LysR substrate binding domain NA29_RS17110 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NA29_RS17115 PF07005 Sugar-binding N-terminal domain NA29_RS17115 PF17042 Nucleotide-binding C-terminal domain NA29_RS17120 PF03812 2-keto-3-deoxygluconate permease NA29_RS17125 PF00455 DeoR C terminal sensor domain NA29_RS17125 PF08220 DeoR-like helix-turn-helix domain NA29_RS17135 PF01118 Semialdehyde dehydrogenase, NAD binding domain NA29_RS17140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17145 PF04444 Catechol dioxygenase N terminus NA29_RS17145 PF00775 Dioxygenase NA29_RS17150 PF01638 HxlR-like helix-turn-helix NA29_RS17160 PF00474 Sodium:solute symporter family NA29_RS17170 PF01177 Asp/Glu/Hydantoin racemase NA29_RS17185 PF03466 LysR substrate binding domain NA29_RS17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17190 PF00106 short chain dehydrogenase NA29_RS17195 PF00072 Response regulator receiver domain NA29_RS17195 PF00486 Transcriptional regulatory protein, C terminal NA29_RS17205 PF01618 MotA/TolQ/ExbB proton channel family NA29_RS17210 PF02472 Biopolymer transport protein ExbD/TolR NA29_RS17225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NA29_RS17225 PF13378 Enolase C-terminal domain-like NA29_RS17230 PF00144 Beta-lactamase NA29_RS17230 PF07930 D-aminopeptidase, domain B NA29_RS17235 PF00144 Beta-lactamase NA29_RS17240 PF07715 TonB-dependent Receptor Plug Domain NA29_RS17240 PF00593 TonB dependent receptor NA29_RS17245 PF00672 HAMP domain NA29_RS17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS17245 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS17250 PF07364 Metallopeptidase family M81 NA29_RS17250 PF07171 MlrC C-terminus NA29_RS17255 PF01266 FAD dependent oxidoreductase NA29_RS17265 PF01381 Helix-turn-helix NA29_RS17265 PF07883 Cupin domain NA29_RS17275 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS17280 PF00005 ABC transporter NA29_RS17285 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NA29_RS17295 PF00005 ABC transporter NA29_RS17310 PF00171 Aldehyde dehydrogenase family NA29_RS17315 PF00970 Oxidoreductase FAD-binding domain NA29_RS17315 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS17320 PF04909 Amidohydrolase NA29_RS17325 PF00355 Rieske [2Fe-2S] domain NA29_RS17330 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS17330 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit NA29_RS17335 PF00355 Rieske [2Fe-2S] domain NA29_RS17340 PF07683 Cobalamin synthesis protein cobW C-terminal domain NA29_RS17340 PF02492 CobW/HypB/UreG, nucleotide-binding domain NA29_RS17345 PF00392 Bacterial regulatory proteins, gntR family NA29_RS17345 PF07729 FCD domain NA29_RS17350 PF03737 Aldolase/RraA NA29_RS17355 PF03737 Aldolase/RraA NA29_RS17355 PF00180 Isocitrate/isopropylmalate dehydrogenase NA29_RS17360 PF03737 Aldolase/RraA NA29_RS17365 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit NA29_RS17365 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS17370 PF07690 Major Facilitator Superfamily NA29_RS17385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS17385 PF00034 Cytochrome c NA29_RS17400 PF16859 Tetracyclin repressor-like, C-terminal domain NA29_RS17400 PF00440 Bacterial regulatory proteins, tetR family NA29_RS17405 PF00596 Class II Aldolase and Adducin N-terminal domain NA29_RS17410 PF07690 Major Facilitator Superfamily NA29_RS17415 PF13193 AMP-binding enzyme C-terminal domain NA29_RS17415 PF00501 AMP-binding enzyme NA29_RS17425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NA29_RS17425 PF02403 Seryl-tRNA synthetase N-terminal domain NA29_RS17430 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS17430 PF16193 AAA C-terminal domain NA29_RS17430 PF12002 MgsA AAA+ ATPase C terminal NA29_RS17435 PF03548 Outer membrane lipoprotein carrier protein LolA NA29_RS17440 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NA29_RS17440 PF17854 FtsK alpha domain NA29_RS17440 PF09397 Ftsk gamma domain NA29_RS17440 PF01580 FtsK/SpoIIIE family NA29_RS17445 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS17450 PF00488 MutS domain V NA29_RS17450 PF01713 Smr domain NA29_RS17455 PF03458 UPF0126 domain NA29_RS17460 PF00543 Nitrogen regulatory protein P-II NA29_RS17465 PF00795 Carbon-nitrogen hydrolase NA29_RS17465 PF02540 NAD synthase NA29_RS17475 PF02525 Flavodoxin-like fold NA29_RS17485 PF00719 Inorganic pyrophosphatase NA29_RS17490 PF01070 FMN-dependent dehydrogenase NA29_RS17500 PF00701 Dihydrodipicolinate synthetase family NA29_RS17505 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS17510 PF00005 ABC transporter NA29_RS17510 PF08402 TOBE domain NA29_RS17520 PF01565 FAD binding domain NA29_RS17520 PF02913 FAD linked oxidases, C-terminal domain NA29_RS17525 PF00171 Aldehyde dehydrogenase family NA29_RS17535 PF07690 Major Facilitator Superfamily NA29_RS17540 PF07690 Major Facilitator Superfamily NA29_RS17555 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NA29_RS17555 PF03900 Porphobilinogen deaminase, C-terminal domain NA29_RS17560 PF00311 Phosphoenolpyruvate carboxylase NA29_RS17565 PF01817 Chorismate mutase type II NA29_RS17570 PF00206 Lyase NA29_RS17570 PF14698 Argininosuccinate lyase C-terminal NA29_RS17575 PF03616 Sodium/glutamate symporter NA29_RS17580 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NA29_RS17580 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NA29_RS17580 PF01276 Orn/Lys/Arg decarboxylase, major domain NA29_RS17585 PF00692 dUTPase NA29_RS17590 PF10609 NUBPL iron-transfer P-loop NTPase NA29_RS17595 PF00691 OmpA family NA29_RS17595 PF13488 Glycine zipper NA29_RS17600 PF09334 tRNA synthetases class I (M) NA29_RS17600 PF01588 Putative tRNA binding domain NA29_RS17605 PF01037 Lrp/AsnC ligand binding domain NA29_RS17605 PF13404 AsnC-type helix-turn-helix domain NA29_RS17620 PF04357 TamB, inner membrane protein subunit of TAM complex NA29_RS17635 PF02616 Segregation and condensation protein ScpA NA29_RS17640 PF02569 Pantoate-beta-alanine ligase NA29_RS17645 PF02261 Aspartate decarboxylase NA29_RS17650 PF01883 Iron-sulfur cluster assembly protein NA29_RS17650 PF10609 NUBPL iron-transfer P-loop NTPase NA29_RS17655 PF07685 CobB/CobQ-like glutamine amidotransferase domain NA29_RS17655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NA29_RS17660 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NA29_RS17665 PF17113 Regulatory signalling modulator protein AmpE NA29_RS17665 PF03186 CobD/Cbib protein NA29_RS17670 PF00155 Aminotransferase class I and II NA29_RS17680 PF01497 Periplasmic binding protein NA29_RS17690 PF02654 Cobalamin-5-phosphate synthase NA29_RS17695 PF02277 Phosphoribosyltransferase NA29_RS17700 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NA29_RS17700 PF12557 Cob(I)alamin adenosyltransferase N terminal NA29_RS17705 PF00005 ABC transporter NA29_RS17710 PF01032 FecCD transport family NA29_RS17715 PF07715 TonB-dependent Receptor Plug Domain NA29_RS17715 PF00593 TonB dependent receptor NA29_RS17735 PF12806 Acetyl-CoA dehydrogenase C-terminal like NA29_RS17735 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS17735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS17735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS17740 PF00766 Electron transfer flavoprotein FAD-binding domain NA29_RS17740 PF01012 Electron transfer flavoprotein domain NA29_RS17745 PF01012 Electron transfer flavoprotein domain NA29_RS17755 PF00175 Oxidoreductase NAD-binding domain NA29_RS17755 PF00970 Oxidoreductase FAD-binding domain NA29_RS17760 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS17765 PF00850 Histone deacetylase domain NA29_RS17770 PF13406 Transglycosylase SLT domain NA29_RS17775 PF00291 Pyridoxal-phosphate dependent enzyme NA29_RS17785 PF01370 NAD dependent epimerase/dehydratase family NA29_RS17790 PF00294 pfkB family carbohydrate kinase NA29_RS17795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NA29_RS17795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NA29_RS17795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NA29_RS17800 PF18073 Rubredoxin metal binding domain NA29_RS17810 PF00216 Bacterial DNA-binding protein NA29_RS17815 PF00575 S1 RNA binding domain NA29_RS17820 PF02224 Cytidylate kinase NA29_RS17825 PF01566 Natural resistance-associated macrophage protein NA29_RS17830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NA29_RS17835 PF02153 Prephenate dehydrogenase NA29_RS17835 PF01842 ACT domain NA29_RS17840 PF00800 Prephenate dehydratase NA29_RS17840 PF01817 Chorismate mutase type II NA29_RS17840 PF01842 ACT domain NA29_RS17845 PF00266 Aminotransferase class-V NA29_RS17855 PF00521 DNA gyrase/topoisomerase IV, subunit A NA29_RS17855 PF03989 DNA gyrase C-terminal domain, beta-propeller NA29_RS17860 PF00691 OmpA family NA29_RS17880 PF00501 AMP-binding enzyme NA29_RS17880 PF13193 AMP-binding enzyme C-terminal domain NA29_RS17885 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS17895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NA29_RS17910 PF00392 Bacterial regulatory proteins, gntR family NA29_RS17910 PF07729 FCD domain NA29_RS17915 PF01790 Prolipoprotein diacylglyceryl transferase NA29_RS17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS17920 PF03466 LysR substrate binding domain NA29_RS17925 PF00920 Dehydratase family NA29_RS17930 PF00920 Dehydratase family NA29_RS17945 PF04364 DNA polymerase III chi subunit, HolC NA29_RS17950 PF00883 Cytosol aminopeptidase family, catalytic domain NA29_RS17950 PF02789 Cytosol aminopeptidase family, N-terminal domain NA29_RS17955 PF03739 Lipopolysaccharide export system permease LptF/LptG NA29_RS17995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NA29_RS18000 PF00009 Elongation factor Tu GTP binding domain NA29_RS18005 PF01507 Phosphoadenosine phosphosulfate reductase family NA29_RS18010 PF01507 Phosphoadenosine phosphosulfate reductase family NA29_RS18015 PF01925 Sulfite exporter TauE/SafE NA29_RS18020 PF03466 LysR substrate binding domain NA29_RS18020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS18105 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH NA29_RS18115 PF04960 Glutaminase NA29_RS18140 PF01494 FAD binding domain NA29_RS18165 PF00355 Rieske [2Fe-2S] domain NA29_RS18170 PF12852 Cupin NA29_RS18170 PF12833 Helix-turn-helix domain NA29_RS18175 PF00255 Glutathione peroxidase NA29_RS18185 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS18185 PF00970 Oxidoreductase FAD-binding domain NA29_RS18190 PF01042 Endoribonuclease L-PSP NA29_RS18195 PF00355 Rieske [2Fe-2S] domain NA29_RS18210 PF09084 NMT1/THI5 like NA29_RS18215 PF00171 Aldehyde dehydrogenase family NA29_RS18220 PF03447 Homoserine dehydrogenase, NAD binding domain NA29_RS18220 PF01958 Domain of unknown function DUF108 NA29_RS18225 PF00205 Thiamine pyrophosphate enzyme, central domain NA29_RS18225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NA29_RS18225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NA29_RS18230 PF00106 short chain dehydrogenase NA29_RS18235 PF09339 IclR helix-turn-helix domain NA29_RS18235 PF01614 Bacterial transcriptional regulator NA29_RS18240 PF12697 Alpha/beta hydrolase family NA29_RS18255 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS18260 PF00005 ABC transporter NA29_RS18270 PF01494 FAD binding domain NA29_RS18295 PF07690 Major Facilitator Superfamily NA29_RS18300 PF00012 Hsp70 protein NA29_RS18305 PF02447 GntP family permease NA29_RS18310 PF01048 Phosphorylase superfamily NA29_RS18310 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus NA29_RS18315 PF07311 Dodecin NA29_RS18320 PF01047 MarR family NA29_RS18325 PF01380 SIS domain NA29_RS18325 PF01418 Helix-turn-helix domain, rpiR family NA29_RS18325 PF02685 Glucokinase NA29_RS18330 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NA29_RS18335 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NA29_RS18335 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NA29_RS18340 PF00920 Dehydratase family NA29_RS18350 PF00701 Dihydrodipicolinate synthetase family NA29_RS18365 PF00689 Cation transporting ATPase, C-terminus NA29_RS18365 PF00690 Cation transporter/ATPase, N-terminus NA29_RS18375 PF01569 PAP2 superfamily NA29_RS18380 PF01272 Transcription elongation factor, GreA/GreB, C-term NA29_RS18380 PF14760 Rnk N-terminus NA29_RS18385 PF00202 Aminotransferase class-III NA29_RS18390 PF04011 LemA family NA29_RS18405 PF01872 RibD C-terminal domain NA29_RS18405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NA29_RS18410 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS18415 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS18425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS18425 PF03466 LysR substrate binding domain NA29_RS18430 PF13458 Periplasmic binding protein NA29_RS18435 PF02653 Branched-chain amino acid transport system / permease component NA29_RS18440 PF11862 Domain of unknown function (DUF3382) NA29_RS18440 PF02653 Branched-chain amino acid transport system / permease component NA29_RS18445 PF00005 ABC transporter NA29_RS18445 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS18450 PF00005 ABC transporter NA29_RS18460 PF01022 Bacterial regulatory protein, arsR family NA29_RS18465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NA29_RS18465 PF00925 GTP cyclohydrolase II NA29_RS18470 PF00885 6,7-dimethyl-8-ribityllumazine synthase NA29_RS18475 PF01029 NusB family NA29_RS18480 PF00155 Aminotransferase class I and II NA29_RS18485 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NA29_RS18485 PF01464 Transglycosylase SLT domain NA29_RS18490 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NA29_RS18495 PF00171 Aldehyde dehydrogenase family NA29_RS18500 PF13520 Amino acid permease NA29_RS18505 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS18505 PF03707 Bacterial signalling protein N terminal repeat NA29_RS18505 PF00563 EAL domain NA29_RS18510 PF03180 NLPA lipoprotein NA29_RS18515 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS18520 PF00005 ABC transporter NA29_RS18520 PF09383 NIL domain NA29_RS18525 PF01339 CheB methylesterase NA29_RS18525 PF00072 Response regulator receiver domain NA29_RS18530 PF00196 Bacterial regulatory proteins, luxR family NA29_RS18530 PF00072 Response regulator receiver domain NA29_RS18550 PF07730 Histidine kinase NA29_RS18550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS18555 PF05532 CsbD-like NA29_RS18575 PF00672 HAMP domain NA29_RS18575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS18575 PF13426 PAS domain NA29_RS18580 PF03466 LysR substrate binding domain NA29_RS18580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS18595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS18595 PF03466 LysR substrate binding domain NA29_RS18610 PF00486 Transcriptional regulatory protein, C terminal NA29_RS18610 PF00072 Response regulator receiver domain NA29_RS18615 PF00672 HAMP domain NA29_RS18615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS18615 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS18620 PF13609 Gram-negative porin NA29_RS18625 PF17912 MalK OB fold domain NA29_RS18625 PF00005 ABC transporter NA29_RS18635 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS18640 PF07690 Major Facilitator Superfamily NA29_RS18645 PF13193 AMP-binding enzyme C-terminal domain NA29_RS18645 PF00501 AMP-binding enzyme NA29_RS18650 PF00171 Aldehyde dehydrogenase family NA29_RS18655 PF09339 IclR helix-turn-helix domain NA29_RS18655 PF01614 Bacterial transcriptional regulator NA29_RS18670 PF00501 AMP-binding enzyme NA29_RS18670 PF00550 Phosphopantetheine attachment site NA29_RS18670 PF07993 Male sterility protein NA29_RS18670 PF00668 Condensation domain NA29_RS18670 PF13193 AMP-binding enzyme C-terminal domain NA29_RS18680 PF00155 Aminotransferase class I and II NA29_RS18685 PF03466 LysR substrate binding domain NA29_RS18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS18690 PF02954 Bacterial regulatory protein, Fis family NA29_RS18690 PF00158 Sigma-54 interaction domain NA29_RS18690 PF01590 GAF domain NA29_RS18695 PF00248 Aldo/keto reductase family NA29_RS18705 PF13192 Thioredoxin domain NA29_RS18705 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS18710 PF00578 AhpC/TSA family NA29_RS18710 PF10417 C-terminal domain of 1-Cys peroxiredoxin NA29_RS18725 PF00270 DEAD/DEAH box helicase NA29_RS18725 PF00271 Helicase conserved C-terminal domain NA29_RS18740 PF03606 C4-dicarboxylate anaerobic carrier NA29_RS18760 PF13609 Gram-negative porin NA29_RS18785 PF07690 Major Facilitator Superfamily NA29_RS18795 PF01494 FAD binding domain NA29_RS18800 PF02311 AraC-like ligand binding domain NA29_RS18800 PF12833 Helix-turn-helix domain NA29_RS18805 PF12146 Serine aminopeptidase, S33 NA29_RS18810 PF02627 Carboxymuconolactone decarboxylase family NA29_RS18815 PF10397 Adenylosuccinate lyase C-terminus NA29_RS18815 PF00206 Lyase NA29_RS18825 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NA29_RS18825 PF00775 Dioxygenase NA29_RS18830 PF03466 LysR substrate binding domain NA29_RS18830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS18840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS18840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS18840 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS18840 PF12806 Acetyl-CoA dehydrogenase C-terminal like NA29_RS18845 PF00501 AMP-binding enzyme NA29_RS18845 PF13193 AMP-binding enzyme C-terminal domain NA29_RS18850 PF00171 Aldehyde dehydrogenase family NA29_RS18855 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS18860 PF13609 Gram-negative porin NA29_RS18865 PF07690 Major Facilitator Superfamily NA29_RS18875 PF00072 Response regulator receiver domain NA29_RS18890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS18890 PF16591 Helical bimodular sensor domain NA29_RS18890 PF00672 HAMP domain NA29_RS18895 PF01584 CheW-like domain NA29_RS18895 PF02895 Signal transducing histidine kinase, homodimeric domain NA29_RS18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS18895 PF01627 Hpt domain NA29_RS18895 PF07194 P2 response regulator binding domain NA29_RS18900 PF03466 LysR substrate binding domain NA29_RS18900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS18905 PF01494 FAD binding domain NA29_RS18910 PF07690 Major Facilitator Superfamily NA29_RS18920 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS18920 PF12911 N-terminal TM domain of oligopeptide transport permease C NA29_RS18925 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS18930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NA29_RS18935 PF00005 ABC transporter NA29_RS18935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS18940 PF00005 ABC transporter NA29_RS18940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NA29_RS18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS18945 PF03466 LysR substrate binding domain NA29_RS18950 PF00083 Sugar (and other) transporter NA29_RS18950 PF07690 Major Facilitator Superfamily NA29_RS18955 PF06481 COX Aromatic Rich Motif NA29_RS18955 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NA29_RS18960 PF00115 Cytochrome C and Quinol oxidase polypeptide I NA29_RS18965 PF00510 Cytochrome c oxidase subunit III NA29_RS18970 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NA29_RS18980 PF00155 Aminotransferase class I and II NA29_RS18980 PF00392 Bacterial regulatory proteins, gntR family NA29_RS18995 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS19000 PF00005 ABC transporter NA29_RS19000 PF09383 NIL domain NA29_RS19005 PF03180 NLPA lipoprotein NA29_RS19010 PF00768 D-alanyl-D-alanine carboxypeptidase NA29_RS19015 PF07690 Major Facilitator Superfamily NA29_RS19020 PF03169 OPT oligopeptide transporter protein NA29_RS19025 PF00583 Acetyltransferase (GNAT) family NA29_RS19055 PF01636 Phosphotransferase enzyme family NA29_RS19060 PF04307 LexA-binding, inner membrane-associated putative hydrolase NA29_RS19130 PF03831 PhnA domain NA29_RS19130 PF08274 PhnA Zinc-Ribbon NA29_RS19145 PF00005 ABC transporter NA29_RS19155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NA29_RS19160 PF00384 Molybdopterin oxidoreductase NA29_RS19160 PF04324 BFD-like [2Fe-2S] binding domain NA29_RS19160 PF01568 Molydopterin dinucleotide binding domain NA29_RS19160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS19170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NA29_RS19170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NA29_RS19170 PF04324 BFD-like [2Fe-2S] binding domain NA29_RS19170 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS19170 PF18267 Rubredoxin NAD+ reductase C-terminal domain NA29_RS19180 PF01613 Flavin reductase like domain NA29_RS19190 PF03466 LysR substrate binding domain NA29_RS19190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19195 PF00083 Sugar (and other) transporter NA29_RS19200 PF03466 LysR substrate binding domain NA29_RS19200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19205 PF03466 LysR substrate binding domain NA29_RS19205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19210 PF02770 Acyl-CoA dehydrogenase, middle domain NA29_RS19210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS19210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NA29_RS19230 PF13533 Biotin-lipoyl like NA29_RS19235 PF02321 Outer membrane efflux protein NA29_RS19245 PF03472 Autoinducer binding domain NA29_RS19245 PF00196 Bacterial regulatory proteins, luxR family NA29_RS19250 PF03466 LysR substrate binding domain NA29_RS19250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19260 PF03466 LysR substrate binding domain NA29_RS19265 PF00881 Nitroreductase family NA29_RS19270 PF02321 Outer membrane efflux protein NA29_RS19275 PF00873 AcrB/AcrD/AcrF family NA29_RS19280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NA29_RS19280 PF00529 HlyD membrane-fusion protein of T1SS NA29_RS19285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19285 PF03466 LysR substrate binding domain NA29_RS19295 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NA29_RS19310 PF00202 Aminotransferase class-III NA29_RS19315 PF00893 Small Multidrug Resistance protein NA29_RS19320 PF00155 Aminotransferase class I and II NA29_RS19325 PF12852 Cupin NA29_RS19325 PF12833 Helix-turn-helix domain NA29_RS19345 PF00501 AMP-binding enzyme NA29_RS19345 PF13193 AMP-binding enzyme C-terminal domain NA29_RS19350 PF02803 Thiolase, C-terminal domain NA29_RS19350 PF00108 Thiolase, N-terminal domain NA29_RS19355 PF03480 Bacterial extracellular solute-binding protein, family 7 NA29_RS19360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NA29_RS19370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19370 PF03466 LysR substrate binding domain NA29_RS19375 PF02954 Bacterial regulatory protein, Fis family NA29_RS19375 PF00158 Sigma-54 interaction domain NA29_RS19375 PF01590 GAF domain NA29_RS19380 PF13609 Gram-negative porin NA29_RS19385 PF07722 Peptidase C26 NA29_RS19395 PF00107 Zinc-binding dehydrogenase NA29_RS19395 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS19400 PF02142 MGS-like domain NA29_RS19405 PF00106 short chain dehydrogenase NA29_RS19420 PF05872 Bacterial protein of unknown function (DUF853) NA29_RS19425 PF01709 Transcriptional regulator NA29_RS19430 PF02844 Phosphoribosylglycinamide synthetase, N domain NA29_RS19430 PF02843 Phosphoribosylglycinamide synthetase, C domain NA29_RS19430 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NA29_RS19435 PF00924 Mechanosensitive ion channel NA29_RS19435 PF05552 Conserved TM helix NA29_RS19440 PF01218 Coproporphyrinogen III oxidase NA29_RS19445 PF01467 Cytidylyltransferase-like NA29_RS19455 PF02590 Predicted SPOUT methyltransferase NA29_RS19460 PF13416 Bacterial extracellular solute-binding protein NA29_RS19465 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS19470 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS19475 PF00005 ABC transporter NA29_RS19475 PF17912 MalK OB fold domain NA29_RS19480 PF03009 Glycerophosphoryl diester phosphodiesterase family NA29_RS19485 PF02545 Maf-like protein NA29_RS19490 PF10150 Ribonuclease E/G family NA29_RS19490 PF00575 S1 RNA binding domain NA29_RS19495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS19500 PF16916 Dimerisation domain of Zinc Transporter NA29_RS19500 PF01545 Cation efflux family NA29_RS19505 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NA29_RS19510 PF00483 Nucleotidyl transferase NA29_RS19515 PF16363 GDP-mannose 4,6 dehydratase NA29_RS19525 PF00005 ABC transporter NA29_RS19525 PF00664 ABC transporter transmembrane region NA29_RS19530 PF00570 HRDC domain NA29_RS19530 PF16124 RecQ zinc-binding NA29_RS19530 PF00271 Helicase conserved C-terminal domain NA29_RS19530 PF00270 DEAD/DEAH box helicase NA29_RS19530 PF09382 RQC domain NA29_RS19535 PF00535 Glycosyl transferase family 2 NA29_RS19545 PF01336 OB-fold nucleic acid binding domain NA29_RS19545 PF02811 PHP domain NA29_RS19545 PF14579 Helix-hairpin-helix motif NA29_RS19545 PF07733 Bacterial DNA polymerase III alpha NTPase domain NA29_RS19545 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NA29_RS19550 PF17773 UPF0176 acylphosphatase like domain NA29_RS19550 PF00581 Rhodanese-like domain NA29_RS19555 PF00749 tRNA synthetases class I (E and Q), catalytic domain NA29_RS19560 PF00270 DEAD/DEAH box helicase NA29_RS19560 PF00271 Helicase conserved C-terminal domain NA29_RS19570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19570 PF03466 LysR substrate binding domain NA29_RS19580 PF03358 NADPH-dependent FMN reductase NA29_RS19585 PF00905 Penicillin binding protein transpeptidase domain NA29_RS19595 PF13667 ThiC-associated domain NA29_RS19595 PF01964 Radical SAM ThiC family NA29_RS19605 PF01595 Cyclin M transmembrane N-terminal domain NA29_RS19605 PF03471 Transporter associated domain NA29_RS19605 PF00571 CBS domain NA29_RS19610 PF13538 UvrD-like helicase C-terminal domain NA29_RS19615 PF00580 UvrD/REP helicase N-terminal domain NA29_RS19615 PF12705 PD-(D/E)XK nuclease superfamily NA29_RS19615 PF13361 UvrD-like helicase C-terminal domain NA29_RS19620 PF17946 RecC C-terminal domain NA29_RS19625 PF12805 FUSC-like inner membrane protein yccS NA29_RS19630 PF00196 Bacterial regulatory proteins, luxR family NA29_RS19630 PF00072 Response regulator receiver domain NA29_RS19635 PF02321 Outer membrane efflux protein NA29_RS19640 PF00873 AcrB/AcrD/AcrF family NA29_RS19645 PF00873 AcrB/AcrD/AcrF family NA29_RS19650 PF13533 Biotin-lipoyl like NA29_RS19655 PF00486 Transcriptional regulatory protein, C terminal NA29_RS19655 PF00072 Response regulator receiver domain NA29_RS19660 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS19660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS19660 PF00672 HAMP domain NA29_RS19670 PF13302 Acetyltransferase (GNAT) domain NA29_RS19675 PF07690 Major Facilitator Superfamily NA29_RS19685 PF04143 Sulphur transport NA29_RS19695 PF00753 Metallo-beta-lactamase superfamily NA29_RS19700 PF03466 LysR substrate binding domain NA29_RS19700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19715 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS19720 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS19725 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS19730 PF00390 Malic enzyme, N-terminal domain NA29_RS19730 PF03949 Malic enzyme, NAD binding domain NA29_RS19730 PF01515 Phosphate acetyl/butaryl transferase NA29_RS19740 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NA29_RS19745 PF02311 AraC-like ligand binding domain NA29_RS19745 PF12833 Helix-turn-helix domain NA29_RS19750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NA29_RS19755 PF03707 Bacterial signalling protein N terminal repeat NA29_RS19755 PF00563 EAL domain NA29_RS19755 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS19760 PF03466 LysR substrate binding domain NA29_RS19760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS19765 PF00330 Aconitase family (aconitate hydratase) NA29_RS19770 PF00694 Aconitase C-terminal domain NA29_RS19775 PF03390 2-hydroxycarboxylate transporter family NA29_RS19785 PF03976 Polyphosphate kinase 2 (PPK2) NA29_RS19790 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS19790 PF00672 HAMP domain NA29_RS19790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS19795 PF00072 Response regulator receiver domain NA29_RS19795 PF00486 Transcriptional regulatory protein, C terminal NA29_RS19805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NA29_RS19810 PF02687 FtsX-like permease family NA29_RS19810 PF00005 ABC transporter NA29_RS19810 PF12704 MacB-like periplasmic core domain NA29_RS19815 PF02321 Outer membrane efflux protein NA29_RS19825 PF00175 Oxidoreductase NAD-binding domain NA29_RS19825 PF00970 Oxidoreductase FAD-binding domain NA29_RS19825 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS19830 PF00202 Aminotransferase class-III NA29_RS19840 PF00583 Acetyltransferase (GNAT) family NA29_RS19845 PF00005 ABC transporter NA29_RS19850 PF00005 ABC transporter NA29_RS19850 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS19855 PF02653 Branched-chain amino acid transport system / permease component NA29_RS19855 PF11862 Domain of unknown function (DUF3382) NA29_RS19860 PF02653 Branched-chain amino acid transport system / permease component NA29_RS19865 PF13458 Periplasmic binding protein NA29_RS19870 PF02401 LytB protein NA29_RS19875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NA29_RS19880 PF04002 RadC-like JAB domain NA29_RS19885 PF00830 Ribosomal L28 family NA29_RS19890 PF00471 Ribosomal protein L33 NA29_RS19895 PF02910 Fumarate reductase flavoprotein C-term NA29_RS19895 PF00890 FAD binding domain NA29_RS19900 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NA29_RS19900 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NA29_RS19905 PF02445 Quinolinate synthetase A protein NA29_RS19915 PF00924 Mechanosensitive ion channel NA29_RS19915 PF12795 Mechanosensitive ion channel porin domain NA29_RS19915 PF12794 Mechanosensitive ion channel inner membrane domain 1 NA29_RS19920 PF01189 16S rRNA methyltransferase RsmB/F NA29_RS19920 PF01029 NusB family NA29_RS19925 PF00551 Formyl transferase NA29_RS19930 PF01687 Riboflavin kinase NA29_RS19930 PF06574 FAD synthetase NA29_RS19935 PF08264 Anticodon-binding domain of tRNA NA29_RS19935 PF06827 Zinc finger found in FPG and IleRS NA29_RS19935 PF00133 tRNA synthetases class I (I, L, M and V) NA29_RS19940 PF01252 Signal peptidase (SPase) II NA29_RS19945 PF04127 DNA / pantothenate metabolism flavoprotein NA29_RS19945 PF02441 Flavoprotein NA29_RS19950 PF07690 Major Facilitator Superfamily NA29_RS19955 PF00296 Luciferase-like monooxygenase NA29_RS19960 PF00692 dUTPase NA29_RS19965 PF00004 ATPase family associated with various cellular activities (AAA) NA29_RS19965 PF02861 Clp amino terminal domain, pathogenicity island component NA29_RS19965 PF10431 C-terminal, D2-small domain, of ClpB protein NA29_RS19965 PF07724 AAA domain (Cdc48 subfamily) NA29_RS19965 PF17871 AAA lid domain NA29_RS19970 PF02617 ATP-dependent Clp protease adaptor protein ClpS NA29_RS19975 PF00313 'Cold-shock' DNA-binding domain NA29_RS19980 PF00355 Rieske [2Fe-2S] domain NA29_RS19985 PF13577 SnoaL-like domain NA29_RS19990 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NA29_RS19990 PF00355 Rieske [2Fe-2S] domain NA29_RS19995 PF00970 Oxidoreductase FAD-binding domain NA29_RS19995 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS19995 PF00175 Oxidoreductase NAD-binding domain NA29_RS20000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS20000 PF03466 LysR substrate binding domain NA29_RS20015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS20015 PF03466 LysR substrate binding domain NA29_RS20040 PF00180 Isocitrate/isopropylmalate dehydrogenase NA29_RS20045 PF00849 RNA pseudouridylate synthase NA29_RS20065 PF11849 Domain of unknown function (DUF3369) NA29_RS20070 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NA29_RS20070 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NA29_RS20075 PF13742 OB-fold nucleic acid binding domain NA29_RS20075 PF02601 Exonuclease VII, large subunit NA29_RS20080 PF01618 MotA/TolQ/ExbB proton channel family NA29_RS20090 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NA29_RS20095 PF03966 Trm112p-like protein NA29_RS20100 PF02348 Cytidylyltransferase NA29_RS20105 PF05191 Adenylate kinase, active site lid NA29_RS20110 PF00106 short chain dehydrogenase NA29_RS20120 PF13369 Transglutaminase-like superfamily NA29_RS20125 PF03023 Lipid II flippase MurJ NA29_RS20130 PF01649 Ribosomal protein S20 NA29_RS20140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NA29_RS20140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NA29_RS20145 PF06865 Pyrimidine/purine nucleoside phosphorylase NA29_RS20155 PF01565 FAD binding domain NA29_RS20155 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NA29_RS20160 PF04461 Protein of unknown function (DUF520) NA29_RS20165 PF02660 Glycerol-3-phosphate acyltransferase NA29_RS20170 PF00196 Bacterial regulatory proteins, luxR family NA29_RS20170 PF00072 Response regulator receiver domain NA29_RS20180 PF17271 TcfC Usher-like barrel domain NA29_RS20180 PF15976 CS1-pili formation C-terminal NA29_RS20180 PF16967 E-set like domain NA29_RS20185 PF04449 CS1 type fimbrial major subunit NA29_RS20195 PF04073 Aminoacyl-tRNA editing domain NA29_RS20200 PF13193 AMP-binding enzyme C-terminal domain NA29_RS20200 PF00501 AMP-binding enzyme NA29_RS20205 PF02899 Phage integrase, N-terminal SAM-like domain NA29_RS20205 PF00589 Phage integrase family NA29_RS20210 PF08331 Domain of unknown function (DUF1730) NA29_RS20215 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NA29_RS20220 PF01520 N-acetylmuramoyl-L-alanine amidase NA29_RS20220 PF11741 AMIN domain NA29_RS20225 PF09335 SNARE associated Golgi protein NA29_RS20230 PF01119 DNA mismatch repair protein, C-terminal domain NA29_RS20230 PF08676 MutL C terminal dimerisation domain NA29_RS20240 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20245 PF00005 ABC transporter NA29_RS20245 PF08402 TOBE domain NA29_RS20255 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20260 PF00557 Metallopeptidase family M24 NA29_RS20260 PF01321 Creatinase/Prolidase N-terminal domain NA29_RS20265 PF01979 Amidohydrolase family NA29_RS20270 PF03466 LysR substrate binding domain NA29_RS20270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS20275 PF00586 AIR synthase related protein, N-terminal domain NA29_RS20275 PF02769 AIR synthase related protein, C-terminal domain NA29_RS20280 PF08299 Bacterial dnaA protein helix-turn-helix NA29_RS20280 PF00308 Bacterial dnaA protein NA29_RS20280 PF11638 DnaA N-terminal domain NA29_RS20290 PF12627 Probable RNA and SrmB- binding site of polymerase A NA29_RS20290 PF12626 Polymerase A arginine-rich C-terminus NA29_RS20290 PF01743 Poly A polymerase head domain NA29_RS20295 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NA29_RS20300 PF01712 Deoxynucleoside kinase NA29_RS20305 PF02548 Ketopantoate hydroxymethyltransferase NA29_RS20310 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS20310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS20310 PF08521 Two-component sensor kinase N-terminal NA29_RS20315 PF00486 Transcriptional regulatory protein, C terminal NA29_RS20315 PF00072 Response regulator receiver domain NA29_RS20320 PF00005 ABC transporter NA29_RS20325 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20335 PF04715 Anthranilate synthase component I, N terminal region NA29_RS20335 PF00425 chorismate binding enzyme NA29_RS20340 PF00684 DnaJ central domain NA29_RS20340 PF01556 DnaJ C terminal domain NA29_RS20340 PF00226 DnaJ domain NA29_RS20345 PF00012 Hsp70 protein NA29_RS20355 PF01025 GrpE NA29_RS20365 PF01479 S4 domain NA29_RS20370 PF00762 Ferrochelatase NA29_RS20380 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NA29_RS20380 PF01628 HrcA protein C terminal domain NA29_RS20385 PF01513 ATP-NAD kinase NA29_RS20390 PF02463 RecF/RecN/SMC N terminal domain NA29_RS20395 PF03710 Glutamate-ammonia ligase adenylyltransferase NA29_RS20395 PF08335 GlnD PII-uridylyltransferase NA29_RS20405 PF00795 Carbon-nitrogen hydrolase NA29_RS20410 PF01523 Putative modulator of DNA gyrase NA29_RS20415 PF00793 DAHP synthetase I family NA29_RS20420 PF01923 Cobalamin adenosyltransferase NA29_RS20425 PF02913 FAD linked oxidases, C-terminal domain NA29_RS20425 PF01565 FAD binding domain NA29_RS20430 PF01565 FAD binding domain NA29_RS20430 PF02913 FAD linked oxidases, C-terminal domain NA29_RS20435 PF00027 Cyclic nucleotide-binding domain NA29_RS20435 PF00520 Ion transport protein NA29_RS20440 PF01565 FAD binding domain NA29_RS20445 PF00392 Bacterial regulatory proteins, gntR family NA29_RS20445 PF00155 Aminotransferase class I and II NA29_RS20455 PF00255 Glutathione peroxidase NA29_RS20460 PF01168 Alanine racemase, N-terminal domain NA29_RS20465 PF03807 NADP oxidoreductase coenzyme F420-dependent NA29_RS20465 PF14748 Pyrroline-5-carboxylate reductase dimerisation NA29_RS20470 PF01510 N-acetylmuramoyl-L-alanine amidase NA29_RS20475 PF01040 UbiA prenyltransferase family NA29_RS20485 PF03239 Iron permease FTR1 family NA29_RS20490 PF13473 Cupredoxin-like domain NA29_RS20495 PF10634 Fe2+ transport protein NA29_RS20500 PF13404 AsnC-type helix-turn-helix domain NA29_RS20500 PF01037 Lrp/AsnC ligand binding domain NA29_RS20505 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20510 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20515 PF00005 ABC transporter NA29_RS20520 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS20530 PF00034 Cytochrome c NA29_RS20535 PF01740 STAS domain NA29_RS20535 PF00916 Sulfate permease family NA29_RS20540 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NA29_RS20540 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NA29_RS20545 PF00561 alpha/beta hydrolase fold NA29_RS20555 PF01545 Cation efflux family NA29_RS20560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS20560 PF03466 LysR substrate binding domain NA29_RS20615 PF03466 LysR substrate binding domain NA29_RS20615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS20660 PF12867 DinB superfamily NA29_RS20660 PF03781 Sulfatase-modifying factor enzyme 1 NA29_RS20665 PF10017 Histidine-specific methyltransferase, SAM-dependent NA29_RS20690 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NA29_RS20690 PF08666 SAF domain NA29_RS20695 PF00701 Dihydrodipicolinate synthetase family NA29_RS20700 PF00171 Aldehyde dehydrogenase family NA29_RS20710 PF08281 Sigma-70, region 4 NA29_RS20710 PF04542 Sigma-70 region 2 NA29_RS20720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS20725 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20730 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS20730 PF14785 Maltose transport system permease protein MalF P2 domain NA29_RS20735 PF03459 TOBE domain NA29_RS20735 PF00005 ABC transporter NA29_RS20735 PF17912 MalK OB fold domain NA29_RS20745 PF13378 Enolase C-terminal domain-like NA29_RS20745 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NA29_RS20750 PF13609 Gram-negative porin NA29_RS20755 PF07702 UTRA domain NA29_RS20755 PF00392 Bacterial regulatory proteins, gntR family NA29_RS20765 PF12833 Helix-turn-helix domain NA29_RS20790 PF00814 Glycoprotease family NA29_RS20790 PF00583 Acetyltransferase (GNAT) family NA29_RS20800 PF03466 LysR substrate binding domain NA29_RS20800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS20815 PF00043 Glutathione S-transferase, C-terminal domain NA29_RS20815 PF13417 Glutathione S-transferase, N-terminal domain NA29_RS20845 PF01066 CDP-alcohol phosphatidyltransferase NA29_RS20850 PF02254 TrkA-N domain NA29_RS20850 PF07885 Ion channel NA29_RS20855 PF08459 UvrC Helix-hairpin-helix N-terminal NA29_RS20855 PF02151 UvrB/uvrC motif NA29_RS20855 PF01541 GIY-YIG catalytic domain NA29_RS20865 PF09285 Elongation factor P, C-terminal NA29_RS20865 PF08207 Elongation factor P (EF-P) KOW-like domain NA29_RS20865 PF01132 Elongation factor P (EF-P) OB domain NA29_RS20870 PF00933 Glycosyl hydrolase family 3 N terminal domain NA29_RS20875 PF01648 4'-phosphopantetheinyl transferase superfamily NA29_RS20880 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NA29_RS20885 PF02565 Recombination protein O C terminal NA29_RS20885 PF11967 Recombination protein O N terminal NA29_RS20890 PF07650 KH domain NA29_RS20890 PF01926 50S ribosome-binding GTPase NA29_RS20895 PF14622 Ribonuclease-III-like NA29_RS20895 PF00035 Double-stranded RNA binding motif NA29_RS20900 PF10502 Signal peptidase, peptidase S26 NA29_RS20905 PF00009 Elongation factor Tu GTP binding domain NA29_RS20905 PF00679 Elongation factor G C-terminus NA29_RS20905 PF03144 Elongation factor Tu domain 2 NA29_RS20905 PF06421 GTP-binding protein LepA C-terminus NA29_RS20915 PF13180 PDZ domain NA29_RS20930 PF04542 Sigma-70 region 2 NA29_RS20930 PF08281 Sigma-70, region 4 NA29_RS20935 PF00109 Beta-ketoacyl synthase, N-terminal domain NA29_RS20935 PF02801 Beta-ketoacyl synthase, C-terminal domain NA29_RS20940 PF00550 Phosphopantetheine attachment site NA29_RS20950 PF00698 Acyl transferase domain NA29_RS20955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NA29_RS20955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NA29_RS20960 PF02504 Fatty acid synthesis protein NA29_RS20965 PF01783 Ribosomal L32p protein family NA29_RS20970 PF02620 Large ribosomal RNA subunit accumulation protein YceD NA29_RS20975 PF02545 Maf-like protein NA29_RS20980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NA29_RS20985 PF06965 Na+/H+ antiporter 1 NA29_RS20985 PF01343 Peptidase family S49 NA29_RS20995 PF13419 Haloacid dehalogenase-like hydrolase NA29_RS21000 PF00849 RNA pseudouridylate synthase NA29_RS21000 PF01479 S4 domain NA29_RS21005 PF10150 Ribonuclease E/G family NA29_RS21005 PF12111 Polyribonucleotide phosphorylase C terminal NA29_RS21005 PF00575 S1 RNA binding domain NA29_RS21010 PF04055 Radical SAM superfamily NA29_RS21010 PF06463 Molybdenum Cofactor Synthesis C NA29_RS21020 PF12804 MobA-like NTP transferase domain NA29_RS21025 PF00994 Probable molybdopterin binding domain NA29_RS21025 PF03454 MoeA C-terminal region (domain IV) NA29_RS21025 PF03453 MoeA N-terminal region (domain I and II) NA29_RS21035 PF00583 Acetyltransferase (GNAT) family NA29_RS21040 PF02646 RmuC family NA29_RS21045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NA29_RS21045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NA29_RS21055 PF02589 LUD domain NA29_RS21060 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NA29_RS21060 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NA29_RS21065 PF00037 4Fe-4S binding domain NA29_RS21065 PF11953 Domain of unknown function (DUF3470) NA29_RS21080 PF07690 Major Facilitator Superfamily NA29_RS21085 PF00392 Bacterial regulatory proteins, gntR family NA29_RS21085 PF07729 FCD domain NA29_RS21095 PF02913 FAD linked oxidases, C-terminal domain NA29_RS21095 PF01565 FAD binding domain NA29_RS21100 PF01565 FAD binding domain NA29_RS21105 PF02754 Cysteine-rich domain NA29_RS21105 PF13183 4Fe-4S dicluster domain NA29_RS21115 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS21120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS21120 PF03466 LysR substrate binding domain NA29_RS21125 PF03471 Transporter associated domain NA29_RS21125 PF01595 Cyclin M transmembrane N-terminal domain NA29_RS21125 PF00571 CBS domain NA29_RS21135 PF07238 PilZ domain NA29_RS21135 PF07317 Flagellar regulator YcgR NA29_RS21140 PF01810 LysE type translocator NA29_RS21145 PF00313 'Cold-shock' DNA-binding domain NA29_RS21150 PF01551 Peptidase family M23 NA29_RS21150 PF01476 LysM domain NA29_RS21155 PF00535 Glycosyl transferase family 2 NA29_RS21160 PF04349 Periplasmic glucan biosynthesis protein, MdoG NA29_RS21165 PF01810 LysE type translocator NA29_RS21170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS21170 PF03466 LysR substrate binding domain NA29_RS21175 PF01548 Transposase NA29_RS21175 PF02371 Transposase IS116/IS110/IS902 family NA29_RS21180 PF01554 MatE NA29_RS21190 PF07690 Major Facilitator Superfamily NA29_RS21195 PF01979 Amidohydrolase family NA29_RS21200 PF00474 Sodium:solute symporter family NA29_RS21205 PF11755 Protein of unknown function (DUF3311) NA29_RS21215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NA29_RS21220 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS21220 PF07494 Two component regulator propeller NA29_RS21220 PF00072 Response regulator receiver domain NA29_RS21220 PF12833 Helix-turn-helix domain NA29_RS21220 PF07495 Y_Y_Y domain NA29_RS21220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS21225 PF00072 Response regulator receiver domain NA29_RS21225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS21225 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS21225 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS21225 PF01627 Hpt domain NA29_RS21230 PF00083 Sugar (and other) transporter NA29_RS21240 PF03466 LysR substrate binding domain NA29_RS21240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS21260 PF03601 Conserved hypothetical protein 698 NA29_RS21275 PF00691 OmpA family NA29_RS21280 PF03707 Bacterial signalling protein N terminal repeat NA29_RS21280 PF00563 EAL domain NA29_RS21280 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS21285 PF13689 YfiR/HmsC-like NA29_RS21290 PF00563 EAL domain NA29_RS21290 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS21290 PF03707 Bacterial signalling protein N terminal repeat NA29_RS21295 PF08240 Alcohol dehydrogenase GroES-like domain NA29_RS21295 PF00107 Zinc-binding dehydrogenase NA29_RS21300 PF01384 Phosphate transporter family NA29_RS21310 PF13520 Amino acid permease NA29_RS21325 PF02525 Flavodoxin-like fold NA29_RS21330 PF02254 TrkA-N domain NA29_RS21330 PF00999 Sodium/hydrogen exchanger family NA29_RS21360 PF01062 Bestrophin, RFP-TM, chloride channel NA29_RS21370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NA29_RS21370 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NA29_RS21375 PF00171 Aldehyde dehydrogenase family NA29_RS21390 PF03466 LysR substrate binding domain NA29_RS21390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS21395 PF07690 Major Facilitator Superfamily NA29_RS21400 PF00797 N-acetyltransferase NA29_RS21420 PF03466 LysR substrate binding domain NA29_RS21420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS21425 PF02525 Flavodoxin-like fold NA29_RS21435 PF17831 Pyruvate dehydrogenase E1 component middle domain NA29_RS21435 PF00456 Transketolase, thiamine diphosphate binding domain NA29_RS21450 PF00043 Glutathione S-transferase, C-terminal domain NA29_RS21450 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS21455 PF00893 Small Multidrug Resistance protein NA29_RS21465 PF03797 Autotransporter beta-domain NA29_RS21465 PF03212 Pertactin NA29_RS21485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS21485 PF03466 LysR substrate binding domain NA29_RS21520 PF07690 Major Facilitator Superfamily NA29_RS21545 PF02390 Putative methyltransferase NA29_RS21550 PF02673 Bacitracin resistance protein BacA NA29_RS21580 PF00581 Rhodanese-like domain NA29_RS21580 PF00899 ThiF family NA29_RS21585 PF02321 Outer membrane efflux protein NA29_RS21590 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NA29_RS21590 PF00534 Glycosyl transferases group 1 NA29_RS21600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NA29_RS21605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NA29_RS21605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NA29_RS21605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NA29_RS21605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NA29_RS21615 PF13439 Glycosyltransferase Family 4 NA29_RS21615 PF00534 Glycosyl transferases group 1 NA29_RS21620 PF00534 Glycosyl transferases group 1 NA29_RS21620 PF13439 Glycosyltransferase Family 4 NA29_RS21625 PF00534 Glycosyl transferases group 1 NA29_RS21630 PF00953 Glycosyl transferase family 4 NA29_RS21630 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NA29_RS21635 PF00149 Calcineurin-like phosphoesterase NA29_RS21640 PF01553 Acyltransferase NA29_RS21645 PF01979 Amidohydrolase family NA29_RS21650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NA29_RS21650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NA29_RS21655 PF03652 Holliday junction resolvase NA29_RS21660 PF02622 Uncharacterized ACR, COG1678 NA29_RS21670 PF00301 Rubredoxin NA29_RS21675 PF08543 Phosphomethylpyrimidine kinase NA29_RS21685 PF00114 Pilin (bacterial filament) NA29_RS21685 PF07963 Prokaryotic N-terminal methylation motif NA29_RS21690 PF03741 Integral membrane protein TerC family NA29_RS21695 PF00549 CoA-ligase NA29_RS21695 PF02629 CoA binding domain NA29_RS21700 PF00549 CoA-ligase NA29_RS21700 PF08442 ATP-grasp domain NA29_RS21710 PF02631 RecX family NA29_RS21715 PF00154 recA bacterial DNA recombination protein NA29_RS21720 PF00072 Response regulator receiver domain NA29_RS21720 PF00486 Transcriptional regulatory protein, C terminal NA29_RS21725 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS21725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS21725 PF08521 Two-component sensor kinase N-terminal NA29_RS21730 PF00083 Sugar (and other) transporter NA29_RS21730 PF07690 Major Facilitator Superfamily NA29_RS21740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS21740 PF03466 LysR substrate binding domain NA29_RS21745 PF14552 Tautomerase enzyme NA29_RS21755 PF03471 Transporter associated domain NA29_RS21755 PF03741 Integral membrane protein TerC family NA29_RS21760 PF03466 LysR substrate binding domain NA29_RS21760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS21765 PF01594 AI-2E family transporter NA29_RS21780 PF00005 ABC transporter NA29_RS21790 PF01370 NAD dependent epimerase/dehydratase family NA29_RS21795 PF00155 Aminotransferase class I and II NA29_RS21800 PF07883 Cupin domain NA29_RS21800 PF01381 Helix-turn-helix NA29_RS21805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS21805 PF02203 Tar ligand binding domain homologue NA29_RS21805 PF00672 HAMP domain NA29_RS21820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NA29_RS21840 PF00924 Mechanosensitive ion channel NA29_RS21850 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS21855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NA29_RS21860 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS21865 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS21865 PF17158 Membrane-associated sensor, integral membrane domain NA29_RS21870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NA29_RS21875 PF04293 SpoVR like protein NA29_RS21880 PF04285 Protein of unknown function (DUF444) NA29_RS21885 PF08298 PrkA AAA domain NA29_RS21885 PF06798 PrkA serine protein kinase C-terminal domain NA29_RS21890 PF00005 ABC transporter NA29_RS21895 PF00950 ABC 3 transport family NA29_RS21900 PF01297 Zinc-uptake complex component A periplasmic NA29_RS21905 PF04055 Radical SAM superfamily NA29_RS21905 PF00919 Uncharacterized protein family UPF0004 NA29_RS21905 PF01938 TRAM domain NA29_RS21910 PF02562 PhoH-like protein NA29_RS21915 PF02130 Uncharacterized protein family UPF0054 NA29_RS21920 PF04752 ChaC-like protein NA29_RS21925 PF00571 CBS domain NA29_RS21925 PF03471 Transporter associated domain NA29_RS21930 PF00795 Carbon-nitrogen hydrolase NA29_RS21935 PF02091 Glycyl-tRNA synthetase alpha subunit NA29_RS21940 PF05746 DALR anticodon binding domain NA29_RS21940 PF02092 Glycyl-tRNA synthetase beta subunit NA29_RS21950 PF01553 Acyltransferase NA29_RS21960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NA29_RS21965 PF00301 Rubredoxin NA29_RS21975 PF00398 Ribosomal RNA adenine dimethylase NA29_RS21980 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NA29_RS21985 PF09312 SurA N-terminal domain NA29_RS21985 PF00639 PPIC-type PPIASE domain NA29_RS21990 PF04453 LPS transport system D NA29_RS21995 PF01636 Phosphotransferase enzyme family NA29_RS22000 PF00483 Nucleotidyl transferase NA29_RS22005 PF00557 Metallopeptidase family M24 NA29_RS22005 PF05195 Aminopeptidase P, N-terminal domain NA29_RS22010 PF01494 FAD binding domain NA29_RS22015 PF01207 Dihydrouridine synthase (Dus) NA29_RS22020 PF02954 Bacterial regulatory protein, Fis family NA29_RS22025 PF01808 AICARFT/IMPCHase bienzyme NA29_RS22025 PF02142 MGS-like domain NA29_RS22030 PF13609 Gram-negative porin NA29_RS22040 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NA29_RS22045 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS22045 PF01799 [2Fe-2S] binding domain NA29_RS22060 PF00171 Aldehyde dehydrogenase family NA29_RS22075 PF00133 tRNA synthetases class I (I, L, M and V) NA29_RS22075 PF08264 Anticodon-binding domain of tRNA NA29_RS22075 PF13603 Leucyl-tRNA synthetase, Domain 2 NA29_RS22075 PF09334 tRNA synthetases class I (M) NA29_RS22080 PF01113 Dihydrodipicolinate reductase, N-terminus NA29_RS22080 PF05173 Dihydrodipicolinate reductase, C-terminus NA29_RS22085 PF04355 SmpA / OmlA family NA29_RS22090 PF01475 Ferric uptake regulator family NA29_RS22100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NA29_RS22100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NA29_RS22105 PF02779 Transketolase, pyrimidine binding domain NA29_RS22105 PF02780 Transketolase, C-terminal domain NA29_RS22105 PF00456 Transketolase, thiamine diphosphate binding domain NA29_RS22110 PF17284 Spermidine synthase tetramerisation domain NA29_RS22120 PF04452 RNA methyltransferase NA29_RS22135 PF00545 ribonuclease NA29_RS22140 PF03949 Malic enzyme, NAD binding domain NA29_RS22140 PF00390 Malic enzyme, N-terminal domain NA29_RS22140 PF01515 Phosphate acetyl/butaryl transferase NA29_RS22145 PF00586 AIR synthase related protein, N-terminal domain NA29_RS22145 PF02769 AIR synthase related protein, C-terminal domain NA29_RS22150 PF04608 Phosphatidylglycerophosphatase A NA29_RS22155 PF02464 Competence-damaged protein NA29_RS22160 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NA29_RS22165 PF01544 CorA-like Mg2+ transporter protein NA29_RS22170 PF05552 Conserved TM helix NA29_RS22170 PF00924 Mechanosensitive ion channel NA29_RS22175 PF00912 Transglycosylase NA29_RS22180 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NA29_RS22180 PF01488 Shikimate / quinate 5-dehydrogenase NA29_RS22180 PF08501 Shikimate dehydrogenase substrate binding domain NA29_RS22195 PF00773 RNB domain NA29_RS22200 PF05728 Uncharacterised protein family (UPF0227) NA29_RS22205 PF08245 Mur ligase middle domain NA29_RS22205 PF02875 Mur ligase family, glutamate ligase domain NA29_RS22205 PF01225 Mur ligase family, catalytic domain NA29_RS22215 PF08534 Redoxin NA29_RS22220 PF01220 Dehydroquinase class II NA29_RS22225 PF00364 Biotin-requiring enzyme NA29_RS22230 PF02785 Biotin carboxylase C-terminal domain NA29_RS22230 PF00289 Biotin carboxylase, N-terminal domain NA29_RS22230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NA29_RS22245 PF08534 Redoxin NA29_RS22250 PF00294 pfkB family carbohydrate kinase NA29_RS22250 PF01467 Cytidylyltransferase-like NA29_RS22265 PF00268 Ribonucleotide reductase, small chain NA29_RS22275 PF03477 ATP cone domain NA29_RS22275 PF00317 Ribonucleotide reductase, all-alpha domain NA29_RS22275 PF02867 Ribonucleotide reductase, barrel domain NA29_RS22280 PF01510 N-acetylmuramoyl-L-alanine amidase NA29_RS22295 PF01578 Cytochrome C assembly protein NA29_RS22300 PF02881 SRP54-type protein, helical bundle domain NA29_RS22300 PF00448 SRP54-type protein, GTPase domain NA29_RS22300 PF02978 Signal peptide binding domain NA29_RS22305 PF00156 Phosphoribosyl transferase domain NA29_RS22310 PF01914 MarC family integral membrane protein NA29_RS22315 PF04073 Aminoacyl-tRNA editing domain NA29_RS22315 PF03129 Anticodon binding domain NA29_RS22315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NA29_RS22320 PF00293 NUDIX domain NA29_RS22330 PF01472 PUA domain NA29_RS22330 PF00696 Amino acid kinase family NA29_RS22335 PF01926 50S ribosome-binding GTPase NA29_RS22335 PF01018 GTP1/OBG NA29_RS22340 PF01016 Ribosomal L27 protein NA29_RS22345 PF00829 Ribosomal prokaryotic L21 protein NA29_RS22350 PF00348 Polyprenyl synthetase NA29_RS22360 PF00571 CBS domain NA29_RS22360 PF01595 Cyclin M transmembrane N-terminal domain NA29_RS22360 PF03471 Transporter associated domain NA29_RS22365 PF00437 Type II/IV secretion system protein NA29_RS22365 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NA29_RS22370 PF00482 Type II secretion system (T2SS), protein F NA29_RS22375 PF06750 Bacterial Peptidase A24 N-terminal domain NA29_RS22375 PF01478 Type IV leader peptidase family NA29_RS22380 PF01121 Dephospho-CoA kinase NA29_RS22385 PF07072 Cell division protein NA29_RS22390 PF03884 DNA gyrase inhibitor YacG NA29_RS22395 PF00293 NUDIX domain NA29_RS22405 PF01960 ArgJ family NA29_RS22410 PF01043 SecA preprotein cross-linking domain NA29_RS22410 PF02810 SEC-C motif NA29_RS22410 PF07517 SecA DEAD-like domain NA29_RS22410 PF07516 SecA Wing and Scaffold domain NA29_RS22420 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NA29_RS22425 PF12327 FtsZ family, C-terminal domain NA29_RS22425 PF00091 Tubulin/FtsZ family, GTPase domain NA29_RS22430 PF02491 SHS2 domain inserted in FTSA NA29_RS22435 PF08478 POTRA domain, FtsQ-type NA29_RS22435 PF03799 Cell division protein FtsQ NA29_RS22440 PF07478 D-ala D-ala ligase C-terminus NA29_RS22440 PF01820 D-ala D-ala ligase N-terminus NA29_RS22445 PF01225 Mur ligase family, catalytic domain NA29_RS22445 PF02875 Mur ligase family, glutamate ligase domain NA29_RS22445 PF08245 Mur ligase middle domain NA29_RS22450 PF03033 Glycosyltransferase family 28 N-terminal domain NA29_RS22450 PF04101 Glycosyltransferase family 28 C-terminal domain NA29_RS22455 PF01098 Cell cycle protein NA29_RS22460 PF08245 Mur ligase middle domain NA29_RS22460 PF02875 Mur ligase family, glutamate ligase domain NA29_RS22465 PF00953 Glycosyl transferase family 4 NA29_RS22465 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NA29_RS22470 PF08245 Mur ligase middle domain NA29_RS22470 PF02875 Mur ligase family, glutamate ligase domain NA29_RS22470 PF01225 Mur ligase family, catalytic domain NA29_RS22475 PF02875 Mur ligase family, glutamate ligase domain NA29_RS22475 PF08245 Mur ligase middle domain NA29_RS22480 PF00905 Penicillin binding protein transpeptidase domain NA29_RS22480 PF03717 Penicillin-binding Protein dimerisation domain NA29_RS22485 PF04999 Cell division protein FtsL NA29_RS22490 PF01795 MraW methylase family NA29_RS22495 PF02381 MraZ protein, putative antitoxin-like NA29_RS22500 PF03232 Ubiquinone biosynthesis protein COQ7 NA29_RS22505 PF13609 Gram-negative porin NA29_RS22520 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS22520 PF01568 Molydopterin dinucleotide binding domain NA29_RS22520 PF00384 Molybdopterin oxidoreductase NA29_RS22525 PF07687 Peptidase dimerisation domain NA29_RS22525 PF01546 Peptidase family M20/M25/M40 NA29_RS22560 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS22565 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS22575 PF00108 Thiolase, N-terminal domain NA29_RS22575 PF02803 Thiolase, C-terminal domain NA29_RS22580 PF00378 Enoyl-CoA hydratase/isomerase NA29_RS22585 PF03061 Thioesterase superfamily NA29_RS22590 PF14535 AMP-binding enzyme C-terminal domain NA29_RS22590 PF00501 AMP-binding enzyme NA29_RS22595 PF03562 MltA specific insert domain NA29_RS22595 PF06725 3D domain NA29_RS22605 PF04379 ApaG domain NA29_RS22610 PF00834 Ribulose-phosphate 3 epimerase family NA29_RS22615 PF13419 Haloacid dehalogenase-like hydrolase NA29_RS22620 PF00425 chorismate binding enzyme NA29_RS22620 PF04715 Anthranilate synthase component I, N terminal region NA29_RS22625 PF02321 Outer membrane efflux protein NA29_RS22630 PF13533 Biotin-lipoyl like NA29_RS22635 PF00005 ABC transporter NA29_RS22645 PF11339 Protein of unknown function (DUF3141) NA29_RS22650 PF08521 Two-component sensor kinase N-terminal NA29_RS22650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS22650 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS22655 PF00072 Response regulator receiver domain NA29_RS22655 PF00486 Transcriptional regulatory protein, C terminal NA29_RS22660 PF02683 Cytochrome C biogenesis protein transmembrane region NA29_RS22660 PF11412 Disulphide bond corrector protein DsbC NA29_RS22665 PF00578 AhpC/TSA family NA29_RS22670 PF00117 Glutamine amidotransferase class-I NA29_RS22675 PF02885 Glycosyl transferase family, helical bundle domain NA29_RS22675 PF00591 Glycosyl transferase family, a/b domain NA29_RS22680 PF00218 Indole-3-glycerol phosphate synthase NA29_RS22690 PF03167 Uracil DNA glycosylase superfamily NA29_RS22695 PF00593 TonB dependent receptor NA29_RS22695 PF07715 TonB-dependent Receptor Plug Domain NA29_RS22715 PF02525 Flavodoxin-like fold NA29_RS22720 PF03466 LysR substrate binding domain NA29_RS22720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS22730 PF10411 Disulfide bond isomerase protein N-terminus NA29_RS22730 PF13098 Thioredoxin-like domain NA29_RS22735 PF01494 FAD binding domain NA29_RS22740 PF04228 Putative neutral zinc metallopeptidase NA29_RS22745 PF01926 50S ribosome-binding GTPase NA29_RS22745 PF06071 Protein of unknown function (DUF933) NA29_RS22755 PF00392 Bacterial regulatory proteins, gntR family NA29_RS22755 PF07729 FCD domain NA29_RS22770 PF00535 Glycosyl transferase family 2 NA29_RS22780 PF01804 Penicillin amidase NA29_RS22785 PF07690 Major Facilitator Superfamily NA29_RS22790 PF04226 Transglycosylase associated protein NA29_RS22795 PF01488 Shikimate / quinate 5-dehydrogenase NA29_RS22795 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NA29_RS22795 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NA29_RS22800 PF03462 PCRF domain NA29_RS22800 PF00472 RF-1 domain NA29_RS22805 PF05175 Methyltransferase small domain NA29_RS22805 PF17827 PrmC N-terminal domain NA29_RS22810 PF00462 Glutaredoxin NA29_RS22815 PF02441 Flavoprotein NA29_RS22840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS22840 PF08447 PAS fold NA29_RS22840 PF13426 PAS domain NA29_RS22845 PF01739 CheR methyltransferase, SAM binding domain NA29_RS22845 PF03705 CheR methyltransferase, all-alpha domain NA29_RS22850 PF03975 CheD chemotactic sensory transduction NA29_RS22855 PF01584 CheW-like domain NA29_RS22870 PF12848 ABC transporter NA29_RS22870 PF00005 ABC transporter NA29_RS22885 PF00149 Calcineurin-like phosphoesterase NA29_RS22890 PF00708 Acylphosphatase NA29_RS22900 PF01176 Translation initiation factor 1A / IF-1 NA29_RS22910 PF00083 Sugar (and other) transporter NA29_RS22920 PF02397 Bacterial sugar transferase NA29_RS22925 PF03808 Glycosyl transferase WecB/TagA/CpsF family NA29_RS22930 PF05199 GMC oxidoreductase NA29_RS22930 PF00732 GMC oxidoreductase NA29_RS22945 PF12891 Glycoside hydrolase family 44 NA29_RS22945 PF00150 Cellulase (glycosyl hydrolase family 5) NA29_RS22945 PF00942 Cellulose binding domain NA29_RS23010 PF05981 CreA protein NA29_RS23015 PF00158 Sigma-54 interaction domain NA29_RS23015 PF02954 Bacterial regulatory protein, Fis family NA29_RS23015 PF01590 GAF domain NA29_RS23020 PF00171 Aldehyde dehydrogenase family NA29_RS23025 PF00465 Iron-containing alcohol dehydrogenase NA29_RS23035 PF07690 Major Facilitator Superfamily NA29_RS23045 PF07690 Major Facilitator Superfamily NA29_RS23050 PF01380 SIS domain NA29_RS23050 PF01418 Helix-turn-helix domain, rpiR family NA29_RS23060 PF07687 Peptidase dimerisation domain NA29_RS23060 PF01546 Peptidase family M20/M25/M40 NA29_RS23065 PF07690 Major Facilitator Superfamily NA29_RS23070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23070 PF03466 LysR substrate binding domain NA29_RS23115 PF13332 Hemagglutinin repeat NA29_RS23115 PF05860 haemagglutination activity domain NA29_RS23120 PF00639 PPIC-type PPIASE domain NA29_RS23120 PF09312 SurA N-terminal domain NA29_RS23125 PF08479 POTRA domain, ShlB-type NA29_RS23125 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NA29_RS23125 PF17287 POTRA domain NA29_RS23130 PF05594 Haemagluttinin repeat NA29_RS23130 PF13332 Hemagglutinin repeat NA29_RS23130 PF05860 haemagglutination activity domain NA29_RS23130 PF15526 Novel toxin 21 NA29_RS23130 PF04829 Pre-toxin domain with VENN motif NA29_RS23265 PF00589 Phage integrase family NA29_RS23275 PF01555 DNA methylase NA29_RS23275 PF18755 Restriction Enzyme Adenine Methylase Associated NA29_RS23385 PF04386 Stringent starvation protein B NA29_RS23390 PF00043 Glutathione S-transferase, C-terminal domain NA29_RS23390 PF02798 Glutathione S-transferase, N-terminal domain NA29_RS23395 PF02167 Cytochrome C1 family NA29_RS23400 PF00032 Cytochrome b(C-terminal)/b6/petD NA29_RS23400 PF00033 Cytochrome b/b6/petB NA29_RS23405 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NA29_RS23405 PF00355 Rieske [2Fe-2S] domain NA29_RS23410 PF01741 Large-conductance mechanosensitive channel, MscL NA29_RS23415 PF01784 NIF3 (NGG1p interacting factor 3) NA29_RS23420 PF13180 PDZ domain NA29_RS23420 PF17820 PDZ domain NA29_RS23425 PF00902 Sec-independent protein translocase protein (TatC) NA29_RS23430 PF02416 mttA/Hcf106 family NA29_RS23435 PF02416 mttA/Hcf106 family NA29_RS23450 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NA29_RS23455 PF01502 Phosphoribosyl-AMP cyclohydrolase NA29_RS23460 PF00977 Histidine biosynthesis protein NA29_RS23465 PF00977 Histidine biosynthesis protein NA29_RS23470 PF00117 Glutamine amidotransferase class-I NA29_RS23475 PF01914 MarC family integral membrane protein NA29_RS23480 PF00475 Imidazoleglycerol-phosphate dehydratase NA29_RS23485 PF00155 Aminotransferase class I and II NA29_RS23495 PF00815 Histidinol dehydrogenase NA29_RS23500 PF01634 ATP phosphoribosyltransferase NA29_RS23505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NA29_RS23515 PF01061 ABC-2 type transporter NA29_RS23520 PF00005 ABC transporter NA29_RS23540 PF02470 MlaD protein NA29_RS23545 PF02405 Permease MlaE NA29_RS23550 PF00005 ABC transporter NA29_RS23560 PF02581 Thiamine monophosphate synthase NA29_RS23565 PF05690 Thiazole biosynthesis protein ThiG NA29_RS23575 PF01266 FAD dependent oxidoreductase NA29_RS23580 PF00005 ABC transporter NA29_RS23580 PF06472 ABC transporter transmembrane region 2 NA29_RS23590 PF07690 Major Facilitator Superfamily NA29_RS23595 PF08450 SMP-30/Gluconolactonase/LRE-like region NA29_RS23600 PF01370 NAD dependent epimerase/dehydratase family NA29_RS23605 PF07690 Major Facilitator Superfamily NA29_RS23610 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS23610 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NA29_RS23615 PF01645 Conserved region in glutamate synthase NA29_RS23615 PF04898 Glutamate synthase central domain NA29_RS23615 PF01493 GXGXG motif NA29_RS23615 PF00310 Glutamine amidotransferases class-II NA29_RS23625 PF03922 OmpW family NA29_RS23645 PF01966 HD domain NA29_RS23645 PF13286 Phosphohydrolase-associated domain NA29_RS23650 PF01761 3-dehydroquinate synthase NA29_RS23655 PF01202 Shikimate kinase NA29_RS23660 PF11741 AMIN domain NA29_RS23660 PF00263 Bacterial type II and III secretion system protein NA29_RS23660 PF07660 Secretin and TonB N terminus short domain NA29_RS23660 PF03958 Bacterial type II/III secretion system short domain NA29_RS23675 PF00905 Penicillin binding protein transpeptidase domain NA29_RS23675 PF17092 Penicillin-binding protein OB-like domain NA29_RS23675 PF00912 Transglycosylase NA29_RS23680 PF01491 Frataxin-like domain NA29_RS23685 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NA29_RS23685 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NA29_RS23690 PF01794 Ferric reductase like transmembrane component NA29_RS23695 PF00174 Oxidoreductase molybdopterin binding domain NA29_RS23700 PF01578 Cytochrome C assembly protein NA29_RS23705 PF05140 ResB-like family NA29_RS23710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS23715 PF01926 50S ribosome-binding GTPase NA29_RS23720 PF00490 Delta-aminolevulinic acid dehydratase NA29_RS23725 PF11412 Disulphide bond corrector protein DsbC NA29_RS23725 PF02683 Cytochrome C biogenesis protein transmembrane region NA29_RS23730 PF03091 CutA1 divalent ion tolerance protein NA29_RS23735 PF01196 Ribosomal protein L17 NA29_RS23740 PF01000 RNA polymerase Rpb3/RpoA insert domain NA29_RS23740 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NA29_RS23740 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NA29_RS23745 PF00163 Ribosomal protein S4/S9 N-terminal domain NA29_RS23745 PF01479 S4 domain NA29_RS23750 PF00411 Ribosomal protein S11 NA29_RS23755 PF00416 Ribosomal protein S13/S18 NA29_RS23760 PF00444 Ribosomal protein L36 NA29_RS23765 PF01176 Translation initiation factor 1A / IF-1 NA29_RS23770 PF00344 SecY translocase NA29_RS23775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NA29_RS23780 PF00327 Ribosomal protein L30p/L7e NA29_RS23785 PF03719 Ribosomal protein S5, C-terminal domain NA29_RS23785 PF00333 Ribosomal protein S5, N-terminal domain NA29_RS23790 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NA29_RS23795 PF00347 Ribosomal protein L6 NA29_RS23800 PF00410 Ribosomal protein S8 NA29_RS23805 PF00253 Ribosomal protein S14p/S29e NA29_RS23810 PF00281 Ribosomal protein L5 NA29_RS23810 PF00673 ribosomal L5P family C-terminus NA29_RS23815 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NA29_RS23815 PF00467 KOW motif NA29_RS23820 PF00238 Ribosomal protein L14p/L23e NA29_RS23825 PF00366 Ribosomal protein S17 NA29_RS23830 PF00831 Ribosomal L29 protein NA29_RS23835 PF00252 Ribosomal protein L16p/L10e NA29_RS23840 PF00189 Ribosomal protein S3, C-terminal domain NA29_RS23840 PF07650 KH domain NA29_RS23845 PF00237 Ribosomal protein L22p/L17e NA29_RS23850 PF00203 Ribosomal protein S19 NA29_RS23855 PF03947 Ribosomal Proteins L2, C-terminal domain NA29_RS23855 PF00181 Ribosomal Proteins L2, RNA binding domain NA29_RS23860 PF00276 Ribosomal protein L23 NA29_RS23865 PF00573 Ribosomal protein L4/L1 family NA29_RS23870 PF00297 Ribosomal protein L3 NA29_RS23875 PF00338 Ribosomal protein S10p/S20e NA29_RS23880 PF03143 Elongation factor Tu C-terminal domain NA29_RS23880 PF03144 Elongation factor Tu domain 2 NA29_RS23880 PF00009 Elongation factor Tu GTP binding domain NA29_RS23885 PF03764 Elongation factor G, domain IV NA29_RS23885 PF00009 Elongation factor Tu GTP binding domain NA29_RS23885 PF14492 Elongation Factor G, domain II NA29_RS23885 PF00679 Elongation factor G C-terminus NA29_RS23885 PF03144 Elongation factor Tu domain 2 NA29_RS23890 PF00177 Ribosomal protein S7p/S5e NA29_RS23895 PF00164 Ribosomal protein S12/S23 NA29_RS23900 PF00392 Bacterial regulatory proteins, gntR family NA29_RS23900 PF00155 Aminotransferase class I and II NA29_RS23915 PF02311 AraC-like ligand binding domain NA29_RS23915 PF12833 Helix-turn-helix domain NA29_RS23920 PF03653 Uncharacterised protein family (UPF0093) NA29_RS23930 PF01738 Dienelactone hydrolase family NA29_RS23950 PF03466 LysR substrate binding domain NA29_RS23950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS23955 PF00155 Aminotransferase class I and II NA29_RS23960 PF07690 Major Facilitator Superfamily NA29_RS23965 PF02558 Ketopantoate reductase PanE/ApbA NA29_RS23965 PF08546 Ketopantoate reductase PanE/ApbA C terminal NA29_RS23975 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NA29_RS23980 PF00171 Aldehyde dehydrogenase family NA29_RS23985 PF03328 HpcH/HpaI aldolase/citrate lyase family NA29_RS23990 PF01557 Fumarylacetoacetate (FAA) hydrolase family NA29_RS24000 PF07660 Secretin and TonB N terminus short domain NA29_RS24000 PF07715 TonB-dependent Receptor Plug Domain NA29_RS24000 PF00593 TonB dependent receptor NA29_RS24010 PF01050 Mannose-6-phosphate isomerase NA29_RS24010 PF00483 Nucleotidyl transferase NA29_RS24015 PF04983 RNA polymerase Rpb1, domain 3 NA29_RS24015 PF04998 RNA polymerase Rpb1, domain 5 NA29_RS24015 PF00623 RNA polymerase Rpb1, domain 2 NA29_RS24015 PF04997 RNA polymerase Rpb1, domain 1 NA29_RS24015 PF05000 RNA polymerase Rpb1, domain 4 NA29_RS24020 PF04565 RNA polymerase Rpb2, domain 3 NA29_RS24020 PF00562 RNA polymerase Rpb2, domain 6 NA29_RS24020 PF04561 RNA polymerase Rpb2, domain 2 NA29_RS24020 PF04560 RNA polymerase Rpb2, domain 7 NA29_RS24020 PF04563 RNA polymerase beta subunit NA29_RS24020 PF10385 RNA polymerase beta subunit external 1 domain NA29_RS24025 PF00542 Ribosomal protein L7/L12 C-terminal domain NA29_RS24025 PF16320 Ribosomal protein L7/L12 dimerisation domain NA29_RS24030 PF00466 Ribosomal protein L10 NA29_RS24035 PF00687 Ribosomal protein L1p/L10e family NA29_RS24040 PF00298 Ribosomal protein L11, RNA binding domain NA29_RS24040 PF03946 Ribosomal protein L11, N-terminal domain NA29_RS24045 PF00467 KOW motif NA29_RS24045 PF02357 Transcription termination factor nusG NA29_RS24050 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NA29_RS24060 PF00009 Elongation factor Tu GTP binding domain NA29_RS24060 PF03144 Elongation factor Tu domain 2 NA29_RS24060 PF03143 Elongation factor Tu C-terminal domain NA29_RS24085 PF00583 Acetyltransferase (GNAT) family NA29_RS24115 PF13091 PLD-like domain NA29_RS24120 PF00593 TonB dependent receptor NA29_RS24120 PF07715 TonB-dependent Receptor Plug Domain NA29_RS24125 PF16220 Domain of unknown function (DUF4880) NA29_RS24125 PF04773 FecR protein NA29_RS24130 PF04542 Sigma-70 region 2 NA29_RS24130 PF08281 Sigma-70, region 4 NA29_RS24140 PF01965 DJ-1/PfpI family NA29_RS24150 PF00893 Small Multidrug Resistance protein NA29_RS24155 PF01965 DJ-1/PfpI family NA29_RS24160 PF05138 Phenylacetic acid catabolic protein NA29_RS24165 PF06243 Phenylacetic acid degradation B NA29_RS24170 PF05138 Phenylacetic acid catabolic protein NA29_RS24175 PF01883 Iron-sulfur cluster assembly protein NA29_RS24180 PF00111 2Fe-2S iron-sulfur cluster binding domain NA29_RS24180 PF00175 Oxidoreductase NAD-binding domain NA29_RS24180 PF00970 Oxidoreductase FAD-binding domain NA29_RS24190 PF00440 Bacterial regulatory proteins, tetR family NA29_RS24200 PF13404 AsnC-type helix-turn-helix domain NA29_RS24200 PF01037 Lrp/AsnC ligand binding domain NA29_RS24215 PF00390 Malic enzyme, N-terminal domain NA29_RS24215 PF01515 Phosphate acetyl/butaryl transferase NA29_RS24215 PF03949 Malic enzyme, NAD binding domain NA29_RS24220 PF07690 Major Facilitator Superfamily NA29_RS24225 PF00156 Phosphoribosyl transferase domain NA29_RS24230 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NA29_RS24240 PF08241 Methyltransferase domain NA29_RS24250 PF00101 Ribulose bisphosphate carboxylase, small chain NA29_RS24250 PF00132 Bacterial transferase hexapeptide (six repeats) NA29_RS24255 PF01758 Sodium Bile acid symporter family NA29_RS24260 PF00271 Helicase conserved C-terminal domain NA29_RS24260 PF00270 DEAD/DEAH box helicase NA29_RS24265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS24265 PF03466 LysR substrate binding domain NA29_RS24270 PF00860 Permease family NA29_RS24285 PF00144 Beta-lactamase NA29_RS24290 PF01541 GIY-YIG catalytic domain NA29_RS24335 PF05378 Hydantoinase/oxoprolinase N-terminal region NA29_RS24335 PF01968 Hydantoinase/oxoprolinase NA29_RS24340 PF07690 Major Facilitator Superfamily NA29_RS24345 PF07286 Protein of unknown function (DUF1445) NA29_RS24350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS24350 PF03466 LysR substrate binding domain NA29_RS24360 PF00510 Cytochrome c oxidase subunit III NA29_RS24365 PF00510 Cytochrome c oxidase subunit III NA29_RS24370 PF00115 Cytochrome C and Quinol oxidase polypeptide I NA29_RS24375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NA29_RS24380 PF02719 Polysaccharide biosynthesis protein NA29_RS24385 PF01050 Mannose-6-phosphate isomerase NA29_RS24385 PF00483 Nucleotidyl transferase NA29_RS24390 PF01370 NAD dependent epimerase/dehydratase family NA29_RS24395 PF16363 GDP-mannose 4,6 dehydratase NA29_RS24420 PF13580 SIS domain NA29_RS24435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NA29_RS24440 PF02397 Bacterial sugar transferase NA29_RS24455 PF02872 5'-nucleotidase, C-terminal domain NA29_RS24455 PF00149 Calcineurin-like phosphoesterase NA29_RS24485 PF00034 Cytochrome c NA29_RS24495 PF00174 Oxidoreductase molybdopterin binding domain NA29_RS24505 PF08479 POTRA domain, ShlB-type NA29_RS24505 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NA29_RS24510 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding NA29_RS24510 PF07992 Pyridine nucleotide-disulphide oxidoreductase NA29_RS24510 PF10518 TAT (twin-arginine translocation) pathway signal sequence NA29_RS24520 PF04972 BON domain NA29_RS24525 PF13580 SIS domain NA29_RS24530 PF02021 Uncharacterised protein family UPF0102 NA29_RS24535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NA29_RS24540 PF00005 ABC transporter NA29_RS24555 PF03330 Lytic transglycolase NA29_RS24555 PF05036 Sporulation related domain NA29_RS24560 PF00753 Metallo-beta-lactamase superfamily NA29_RS24570 PF03960 ArsC family NA29_RS24575 PF01738 Dienelactone hydrolase family NA29_RS24585 PF01261 Xylose isomerase-like TIM barrel NA29_RS24590 PF13380 CoA binding domain NA29_RS24595 PF07859 alpha/beta hydrolase fold NA29_RS24600 PF00497 Bacterial extracellular solute-binding proteins, family 3 NA29_RS24605 PF01208 Uroporphyrinogen decarboxylase (URO-D) NA29_RS24610 PF00270 DEAD/DEAH box helicase NA29_RS24610 PF18074 Primosomal protein N C-terminal domain NA29_RS24610 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NA29_RS24610 PF00271 Helicase conserved C-terminal domain NA29_RS24610 PF17764 3′ DNA-binding domain (3′BD) NA29_RS24625 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NA29_RS24625 PF14850 DNA-binding domain of Proline dehydrogenase NA29_RS24625 PF01619 Proline dehydrogenase NA29_RS24625 PF00171 Aldehyde dehydrogenase family NA29_RS24630 PF00474 Sodium:solute symporter family NA29_RS24635 PF13458 Periplasmic binding protein NA29_RS24640 PF01235 Sodium:alanine symporter family NA29_RS24650 PF03313 Serine dehydratase alpha chain NA29_RS24650 PF03315 Serine dehydratase beta chain NA29_RS24655 PF02347 Glycine cleavage system P-protein NA29_RS24660 PF01597 Glycine cleavage H-protein NA29_RS24665 PF08669 Glycine cleavage T-protein C-terminal barrel domain NA29_RS24665 PF01571 Aminomethyltransferase folate-binding domain NA29_RS24675 PF00580 UvrD/REP helicase N-terminal domain NA29_RS24675 PF13361 UvrD-like helicase C-terminal domain NA29_RS24685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NA29_RS24705 PF02107 Flagellar L-ring protein NA29_RS24710 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS24710 PF00672 HAMP domain NA29_RS24710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS24715 PF00072 Response regulator receiver domain NA29_RS24715 PF00486 Transcriptional regulatory protein, C terminal NA29_RS24730 PF00528 Binding-protein-dependent transport system inner membrane component NA29_RS24735 PF00005 ABC transporter NA29_RS24745 PF00072 Response regulator receiver domain NA29_RS24745 PF00486 Transcriptional regulatory protein, C terminal NA29_RS24750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS24750 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS24755 PF05231 MASE1 NA29_RS24755 PF07730 Histidine kinase NA29_RS24755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS24760 PF00196 Bacterial regulatory proteins, luxR family NA29_RS24760 PF00072 Response regulator receiver domain NA29_RS24765 PF00700 Bacterial flagellin C-terminal helical region NA29_RS24765 PF00669 Bacterial flagellin N-terminal helical region NA29_RS24770 PF07195 Flagellar hook-associated protein 2 C-terminus NA29_RS24770 PF02465 Flagellar hook-associated protein 2 N-terminus NA29_RS24775 PF02561 Flagellar protein FliS NA29_RS24780 PF05400 Flagellar protein FliT NA29_RS24790 PF01312 FlhB HrpN YscU SpaS Family NA29_RS24805 PF02049 Flagellar hook-basal body complex protein FliE NA29_RS24810 PF01514 Secretory protein of YscJ/FliF family NA29_RS24810 PF08345 Flagellar M-ring protein C-terminal NA29_RS24815 PF01706 FliG C-terminal domain NA29_RS24815 PF14841 FliG middle domain NA29_RS24815 PF14842 FliG N-terminal domain NA29_RS24820 PF02108 Flagellar assembly protein FliH NA29_RS24825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NA29_RS24825 PF18269 T3SS EscN ATPase C-terminal domain NA29_RS24830 PF02050 Flagellar FliJ protein NA29_RS24835 PF02120 Flagellar hook-length control protein FliK NA29_RS24840 PF03748 Flagellar basal body-associated protein FliL NA29_RS24845 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NA29_RS24845 PF02154 Flagellar motor switch protein FliM NA29_RS24850 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NA29_RS24855 PF04347 Flagellar biosynthesis protein, FliO NA29_RS24860 PF00813 FliP family NA29_RS24865 PF01313 Bacterial export proteins, family 3 NA29_RS24870 PF01311 Bacterial export proteins, family 1 NA29_RS24875 PF00669 Bacterial flagellin N-terminal helical region NA29_RS24880 PF00460 Flagella basal body rod protein NA29_RS24880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NA29_RS24885 PF10135 Rod binding protein NA29_RS24885 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NA29_RS24890 PF02119 Flagellar P-ring protein NA29_RS24895 PF02107 Flagellar L-ring protein NA29_RS24900 PF00460 Flagella basal body rod protein NA29_RS24900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NA29_RS24905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NA29_RS24905 PF00460 Flagella basal body rod protein NA29_RS24910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NA29_RS24910 PF00460 Flagella basal body rod protein NA29_RS24910 PF07559 Flagellar basal body protein FlaE NA29_RS24915 PF13861 FlgD Tudor-like domain NA29_RS24915 PF13860 FlgD Ig-like domain NA29_RS24915 PF03963 Flagellar hook capping protein - N-terminal region NA29_RS24920 PF00460 Flagella basal body rod protein NA29_RS24920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NA29_RS24925 PF00460 Flagella basal body rod protein NA29_RS24935 PF04316 Anti-sigma-28 factor, FlgM NA29_RS24950 PF04055 Radical SAM superfamily NA29_RS24950 PF13186 Iron-sulfur cluster-binding domain NA29_RS24955 PF04545 Sigma-70, region 4 NA29_RS24955 PF04539 Sigma-70 region 3 NA29_RS24955 PF04542 Sigma-70 region 2 NA29_RS24965 PF00448 SRP54-type protein, GTPase domain NA29_RS24970 PF00771 FHIPEP family NA29_RS24975 PF01312 FlhB HrpN YscU SpaS Family NA29_RS24980 PF04344 Chemotaxis phosphatase, CheZ NA29_RS24985 PF00072 Response regulator receiver domain NA29_RS24990 PF00072 Response regulator receiver domain NA29_RS24990 PF01339 CheB methylesterase NA29_RS24995 PF03975 CheD chemotactic sensory transduction NA29_RS25000 PF03705 CheR methyltransferase, all-alpha domain NA29_RS25000 PF01739 CheR methyltransferase, SAM binding domain NA29_RS25005 PF02203 Tar ligand binding domain homologue NA29_RS25005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS25005 PF00672 HAMP domain NA29_RS25010 PF00672 HAMP domain NA29_RS25010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS25010 PF02203 Tar ligand binding domain homologue NA29_RS25015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NA29_RS25015 PF02203 Tar ligand binding domain homologue NA29_RS25015 PF00672 HAMP domain NA29_RS25020 PF01584 CheW-like domain NA29_RS25025 PF01584 CheW-like domain NA29_RS25025 PF02895 Signal transducing histidine kinase, homodimeric domain NA29_RS25025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS25025 PF01627 Hpt domain NA29_RS25025 PF09078 CheY binding NA29_RS25030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NA29_RS25030 PF00512 His Kinase A (phospho-acceptor) domain NA29_RS25030 PF01627 Hpt domain NA29_RS25030 PF00072 Response regulator receiver domain NA29_RS25035 PF00691 OmpA family NA29_RS25035 PF13677 Membrane MotB of proton-channel complex MotA/MotB NA29_RS25040 PF01618 MotA/TolQ/ExbB proton channel family NA29_RS25045 PF05280 Flagellar transcriptional activator (FlhC) NA29_RS25050 PF05247 Flagellar transcriptional activator (FlhD) NA29_RS25055 PF07690 Major Facilitator Superfamily NA29_RS25060 PF13193 AMP-binding enzyme C-terminal domain NA29_RS25060 PF00501 AMP-binding enzyme NA29_RS25065 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NA29_RS25065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NA29_RS25070 PF02874 ATP synthase alpha/beta family, beta-barrel domain NA29_RS25070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NA29_RS25075 PF00231 ATP synthase NA29_RS25080 PF02874 ATP synthase alpha/beta family, beta-barrel domain NA29_RS25080 PF00306 ATP synthase alpha/beta chain, C terminal domain NA29_RS25080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NA29_RS25085 PF00213 ATP synthase delta (OSCP) subunit NA29_RS25090 PF00430 ATP synthase B/B' CF(0) NA29_RS25095 PF00137 ATP synthase subunit C NA29_RS25100 PF00119 ATP synthase A chain NA29_RS25110 PF03600 Citrate transporter NA29_RS25115 PF02195 ParB-like nuclease domain NA29_RS25115 PF17762 HTH domain found in ParB protein NA29_RS25120 PF13614 AAA domain NA29_RS25125 PF08212 Lipocalin-like domain NA29_RS25130 PF02527 rRNA small subunit methyltransferase G NA29_RS25135 PF01134 Glucose inhibited division protein A NA29_RS25135 PF13932 GidA associated domain NA29_RS25140 PF00005 ABC transporter NA29_RS25145 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS25145 PF00005 ABC transporter NA29_RS25155 PF01047 MarR family NA29_RS25165 PF01925 Sulfite exporter TauE/SafE NA29_RS25170 PF11862 Domain of unknown function (DUF3382) NA29_RS25170 PF02653 Branched-chain amino acid transport system / permease component NA29_RS25175 PF02653 Branched-chain amino acid transport system / permease component NA29_RS25185 PF00005 ABC transporter NA29_RS25190 PF12399 Branched-chain amino acid ATP-binding cassette transporter NA29_RS25190 PF00005 ABC transporter NA29_RS25195 PF05199 GMC oxidoreductase NA29_RS25195 PF00732 GMC oxidoreductase NA29_RS25200 PF00171 Aldehyde dehydrogenase family NA29_RS25205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS25205 PF03466 LysR substrate binding domain NA29_RS25210 PF10415 Fumarase C C-terminus NA29_RS25210 PF00206 Lyase NA29_RS25215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NA29_RS25215 PF03466 LysR substrate binding domain NA29_RS25220 PF07690 Major Facilitator Superfamily NA29_RS25225 PF01979 Amidohydrolase family NA29_RS25235 PF00579 tRNA synthetases class I (W and Y) NA29_RS25245 PF01037 Lrp/AsnC ligand binding domain NA29_RS25250 PF00593 TonB dependent receptor NA29_RS25250 PF07715 TonB-dependent Receptor Plug Domain NA29_RS25255 PF05171 Haemin-degrading HemS.ChuX domain NA29_RS25260 PF01497 Periplasmic binding protein NA29_RS25265 PF01032 FecCD transport family NA29_RS25270 PF00005 ABC transporter NA29_RS25275 PF02423 Ornithine cyclodeaminase/mu-crystallin family NA29_RS25280 PF00905 Penicillin binding protein transpeptidase domain NA29_RS25280 PF00912 Transglycosylase NA29_RS25285 PF07947 YhhN family NA29_RS25300 PF01037 Lrp/AsnC ligand binding domain NA29_RS25305 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NA29_RS25310 PF01329 Pterin 4 alpha carbinolamine dehydratase NA29_RS25325 PF04107 Glutamate-cysteine ligase family 2(GCS2) NA29_RS25335 PF01266 FAD dependent oxidoreductase NA29_RS25335 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS25340 PF00654 Voltage gated chloride channel NA29_RS25345 PF01047 MarR family NA29_RS25355 PF07690 Major Facilitator Superfamily NA29_RS25360 PF13188 PAS domain NA29_RS25360 PF03707 Bacterial signalling protein N terminal repeat NA29_RS25360 PF00563 EAL domain NA29_RS25360 PF00990 Diguanylate cyclase, GGDEF domain NA29_RS25395 PF10396 GTP-binding protein TrmE N-terminus NA29_RS25395 PF01926 50S ribosome-binding GTPase NA29_RS25395 PF12631 MnmE helical domain NA29_RS25400 PF14849 YidC periplasmic domain NA29_RS25400 PF02096 60Kd inner membrane protein NA29_RS25405 PF01809 Putative membrane protein insertion efficiency factor NA29_RS25410 PF00825 Ribonuclease P NA29_RS25415 PF00468 Ribosomal protein L34