NA29_RS00005 SM00382 ATPases associated with a variety of cellular activities NA29_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain NA29_RS00010 SM00480 DNA polymerase III beta subunit NA29_RS00015 SM00387 Histidine kinase-like ATPases NA29_RS00015 SM00433 TopoisomeraseII NA29_RS00055 SM00834 Putative regulatory protein NA29_RS00065 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NA29_RS00075 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS00075 SM00871 Bacterial transcription activator, effector binding domain NA29_RS00080 SM00382 ATPases associated with a variety of cellular activities NA29_RS00105 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS00105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS00180 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS00190 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS00205 SM00382 ATPases associated with a variety of cellular activities NA29_RS00215 SM00450 Rhodanese Homology Domain NA29_RS00260 SM00965 Secretin and TonB N terminus short domain NA29_RS00275 SM00382 ATPases associated with a variety of cellular activities NA29_RS00440 SM00052 Putative diguanylate phosphodiesterase NA29_RS00455 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS00480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS00480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS00485 SM00260 Two component signalling adaptor domain NA29_RS00490 SM00028 Tetratricopeptide repeats NA29_RS00490 SM00138 Methyltransferase, chemotaxis proteins NA29_RS00495 SM00260 Two component signalling adaptor domain NA29_RS00500 SM00073 Histidine Phosphotransfer domain NA29_RS00500 SM00260 Two component signalling adaptor domain NA29_RS00500 SM00387 Histidine kinase-like ATPases NA29_RS00500 SM00448 cheY-homologous receiver domain NA29_RS00505 SM00448 cheY-homologous receiver domain NA29_RS00510 SM00267 diguanylate cyclase NA29_RS00510 SM00448 cheY-homologous receiver domain NA29_RS00560 SM00382 ATPases associated with a variety of cellular activities NA29_RS00565 SM00382 ATPases associated with a variety of cellular activities NA29_RS00585 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS00585 SM00895 NA29_RS00585 NA29_RS00600 SM00028 Tetratricopeptide repeats NA29_RS00600 SM01043 Bacterial transcriptional activator domain NA29_RS00605 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS00615 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. NA29_RS00665 SM00421 helix_turn_helix, Lux Regulon NA29_RS00665 SM00448 cheY-homologous receiver domain NA29_RS00670 SM00387 Histidine kinase-like ATPases NA29_RS00670 SM01049 NA29_RS00670 NA29_RS00685 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS00695 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain NA29_RS00695 SM00437 Bacterial DNA topoisomerase I DNA-binding domain NA29_RS00695 SM00493 NA29_RS00695 NA29_RS00740 SM00091 PAS domain NA29_RS00740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS00740 SM00387 Histidine kinase-like ATPases NA29_RS00740 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS00745 SM00448 cheY-homologous receiver domain NA29_RS00815 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS00835 SM00382 ATPases associated with a variety of cellular activities NA29_RS00895 SM00862 Transcriptional regulatory protein, C terminal NA29_RS00980 SM00845 GatB domain NA29_RS01080 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase NA29_RS01095 SM00833 Cobalamin synthesis protein cobW C-terminal domain NA29_RS01120 SM00382 ATPases associated with a variety of cellular activities NA29_RS01120 SM01086 C-terminal, D2-small domain, of ClpB protein NA29_RS01125 SM00448 cheY-homologous receiver domain NA29_RS01130 SM00387 Histidine kinase-like ATPases NA29_RS01185 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS01185 SM00895 NA29_RS01185 NA29_RS01220 SM00382 ATPases associated with a variety of cellular activities NA29_RS01225 SM00382 ATPases associated with a variety of cellular activities NA29_RS01315 SM00996 S-adenosyl-L-homocysteine hydrolase NA29_RS01315 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NA29_RS01350 SM00382 ATPases associated with a variety of cellular activities NA29_RS01355 SM00382 ATPases associated with a variety of cellular activities NA29_RS01375 SM00988 UreE urease accessory protein, N-terminal domain NA29_RS01400 SM00382 ATPases associated with a variety of cellular activities NA29_RS01420 SM00382 ATPases associated with a variety of cellular activities NA29_RS01455 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS01465 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS01485 SM00797 Allophanate hydrolase subunit 2 NA29_RS01490 SM00796 Allophanate hydrolase subunit 1 NA29_RS01520 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS01540 SM00905 Dihydroneopterin aldolase NA29_RS01595 SM00382 ATPases associated with a variety of cellular activities NA29_RS01610 SM00448 cheY-homologous receiver domain NA29_RS01610 SM00862 Transcriptional regulatory protein, C terminal NA29_RS01615 SM00387 Histidine kinase-like ATPases NA29_RS01615 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS01630 SM01060 NA29_RS01630 NA29_RS01740 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS01775 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS01790 SM00833 Cobalamin synthesis protein cobW C-terminal domain NA29_RS01900 SM00849 Metallo-beta-lactamase superfamily NA29_RS01935 SM01322 NA29_RS01935 NA29_RS01945 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS01950 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS01960 SM00267 diguanylate cyclase NA29_RS01985 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS01990 SM00878 Biotin carboxylase C-terminal domain NA29_RS01995 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS01995 SM00876 Biotin and Thiamin Synthesis associated domain NA29_RS02045 SM00947 Carbonic anhydrase NA29_RS02065 SM00422 helix_turn_helix, mercury resistance NA29_RS02070 SM00849 Metallo-beta-lactamase superfamily NA29_RS02100 SM00836 DALR anticodon binding domain NA29_RS02100 SM01016 Arginyl tRNA synthetase N terminal dom NA29_RS02120 SM01018 B12 binding domain NA29_RS02130 SM00450 Rhodanese Homology Domain NA29_RS02150 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS02180 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS02235 SM00382 ATPases associated with a variety of cellular activities NA29_RS02270 SM00936 Penicillin-binding protein 5, C-terminal domain NA29_RS02305 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS02315 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS02320 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS02330 SM00382 ATPases associated with a variety of cellular activities NA29_RS02340 SM00387 Histidine kinase-like ATPases NA29_RS02340 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS02345 SM00382 ATPases associated with a variety of cellular activities NA29_RS02345 SM00448 cheY-homologous receiver domain NA29_RS02350 SM00947 Carbonic anhydrase NA29_RS02370 SM00382 ATPases associated with a variety of cellular activities NA29_RS02385 SM00938 Nitrogen regulatory protein P-II NA29_RS02430 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NA29_RS02430 SM00245 tail specific protease NA29_RS02435 SM00855 Phosphoglycerate mutase family NA29_RS02440 SM00450 Rhodanese Homology Domain NA29_RS02460 SM00506 Appr-1"-p processing enzyme NA29_RS02490 SM00788 Adenylosuccinate synthetase NA29_RS02515 SM00903 Flavin reductase like domain NA29_RS02520 SM00421 helix_turn_helix, Lux Regulon NA29_RS02630 SM00382 ATPases associated with a variety of cellular activities NA29_RS02630 SM00962 SRP54-type protein, GTPase domain NA29_RS02630 SM00963 SRP54-type protein, helical bundle domain NA29_RS02650 SM00382 ATPases associated with a variety of cellular activities NA29_RS02665 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS02685 SM01400 NA29_RS02685 NA29_RS02705 SM00028 Tetratricopeptide repeats NA29_RS02710 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain NA29_RS02710 SM01232 NA29_RS02710 NA29_RS02715 SM00478 endonuclease III NA29_RS02750 SM00382 ATPases associated with a variety of cellular activities NA29_RS02770 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS02790 SM00420 helix_turn_helix, Deoxyribose operon repressor NA29_RS02790 SM01134 NA29_RS02790 NA29_RS02795 SM00382 ATPases associated with a variety of cellular activities NA29_RS02815 SM00382 ATPases associated with a variety of cellular activities NA29_RS02820 SM00382 ATPases associated with a variety of cellular activities NA29_RS02845 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS02845 SM00866 NA29_RS02845 NA29_RS02855 SM00072 Guanylate kinase homologues. NA29_RS02895 SM00869 Autotransporter beta-domain NA29_RS02950 SM00382 ATPases associated with a variety of cellular activities NA29_RS02960 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS02960 SM00895 NA29_RS02960 NA29_RS03025 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS03095 SM00387 Histidine kinase-like ATPases NA29_RS03095 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS03100 SM00448 cheY-homologous receiver domain NA29_RS03100 SM00862 Transcriptional regulatory protein, C terminal NA29_RS03115 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS03115 SM00895 NA29_RS03115 NA29_RS03125 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS03135 SM00382 ATPases associated with a variety of cellular activities NA29_RS03140 SM00354 helix_turn _helix lactose operon repressor NA29_RS03150 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NA29_RS03160 SM00344 helix_turn_helix ASNC type NA29_RS03180 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS03180 SM00895 NA29_RS03180 NA29_RS03200 SM01150 NA29_RS03200 NA29_RS03245 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS03265 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS03285 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen NA29_RS03335 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NA29_RS03345 SM00422 helix_turn_helix, mercury resistance NA29_RS03380 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS03415 SM00912 haemagglutination activity domain NA29_RS03445 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS03465 SM00382 ATPases associated with a variety of cellular activities NA29_RS03495 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS03500 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS03540 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS03610 SM00849 Metallo-beta-lactamase superfamily NA29_RS03725 SM00344 helix_turn_helix ASNC type NA29_RS03730 SM00917 LeuA allosteric (dimerisation) domain NA29_RS03740 SM00882 Coenzyme A transferase NA29_RS03745 SM00882 Coenzyme A transferase NA29_RS03750 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS03765 SM00849 Metallo-beta-lactamase superfamily NA29_RS03770 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS03775 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS03790 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS03810 SM01217 NA29_RS03810 NA29_RS03820 SM01329 NA29_RS03820 NA29_RS03845 SM00052 Putative diguanylate phosphodiesterase NA29_RS03865 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS03870 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS03910 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS03935 SM00833 Cobalamin synthesis protein cobW C-terminal domain NA29_RS03970 SM00382 ATPases associated with a variety of cellular activities NA29_RS03975 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS03980 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS04035 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS04050 SM00448 cheY-homologous receiver domain NA29_RS04050 SM00862 Transcriptional regulatory protein, C terminal NA29_RS04055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS04055 SM00387 Histidine kinase-like ATPases NA29_RS04055 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS04060 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS04065 SM00903 Flavin reductase like domain NA29_RS04075 SM00382 ATPases associated with a variety of cellular activities NA29_RS04140 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. NA29_RS04180 SM00903 Flavin reductase like domain NA29_RS04185 SM00450 Rhodanese Homology Domain NA29_RS04190 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS04225 SM00893 Electron transfer flavoprotein domain NA29_RS04230 SM00893 Electron transfer flavoprotein domain NA29_RS04250 SM01230 NA29_RS04250 NA29_RS04300 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS04305 SM01119 NA29_RS04305 NA29_RS04360 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS04395 SM00978 NA29_RS04395 NA29_RS04420 SM00834 Putative regulatory protein NA29_RS04440 SM00155 Phospholipase D. Active site motifs. NA29_RS04475 SM00382 ATPases associated with a variety of cellular activities NA29_RS04485 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NA29_RS04490 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS04505 SM00382 ATPases associated with a variety of cellular activities NA29_RS04545 SM00859 Semialdehyde dehydrogenase, NAD binding domain NA29_RS04565 SM00363 S4 RNA-binding domain NA29_RS04580 SM00855 Phosphoglycerate mutase family NA29_RS04590 SM00382 ATPases associated with a variety of cellular activities NA29_RS04640 SM00981 NA29_RS04640 NA29_RS04665 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NA29_RS04665 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NA29_RS04685 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS04750 SM00421 helix_turn_helix, Lux Regulon NA29_RS04750 SM00448 cheY-homologous receiver domain NA29_RS04765 SM00382 ATPases associated with a variety of cellular activities NA29_RS04845 SM01323 NA29_RS04845 NA29_RS04860 SM00487 DEAD-like helicases superfamily NA29_RS04860 SM00490 helicase superfamily c-terminal domain NA29_RS04870 SM01060 NA29_RS04870 NA29_RS04985 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. NA29_RS05025 SM00095 Transthyretin NA29_RS05040 SM00382 ATPases associated with a variety of cellular activities NA29_RS05065 SM00903 Flavin reductase like domain NA29_RS05120 SM00421 helix_turn_helix, Lux Regulon NA29_RS05120 SM00448 cheY-homologous receiver domain NA29_RS05135 SM00560 LamG-like jellyroll fold domain NA29_RS05165 SM00965 Secretin and TonB N terminus short domain NA29_RS05180 SM00912 haemagglutination activity domain NA29_RS05235 SM00382 ATPases associated with a variety of cellular activities NA29_RS05240 SM00382 ATPases associated with a variety of cellular activities NA29_RS05265 SM00465 GIY-YIG type nucleases (URI domain) NA29_RS05265 SM00479 NA29_RS05265 NA29_RS05280 SM00267 diguanylate cyclase NA29_RS05290 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS05290 SM00895 NA29_RS05290 NA29_RS05310 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS05360 SM00448 cheY-homologous receiver domain NA29_RS05360 SM00862 Transcriptional regulatory protein, C terminal NA29_RS05365 SM00387 Histidine kinase-like ATPases NA29_RS05365 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS05420 SM00344 helix_turn_helix ASNC type NA29_RS05440 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NA29_RS05445 SM00903 Flavin reductase like domain NA29_RS05470 SM00382 ATPases associated with a variety of cellular activities NA29_RS05490 SM00883 Chaperonin 10 Kd subunit NA29_RS05510 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS05595 SM01001 AIR carboxylase NA29_RS05620 SM00448 cheY-homologous receiver domain NA29_RS05620 SM00862 Transcriptional regulatory protein, C terminal NA29_RS05625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS05625 SM00387 Histidine kinase-like ATPases NA29_RS05625 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS05635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NA29_RS05675 SM00382 ATPases associated with a variety of cellular activities NA29_RS05760 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS05780 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS05785 SM00903 Flavin reductase like domain NA29_RS05815 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS05815 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NA29_RS05825 SM00382 ATPases associated with a variety of cellular activities NA29_RS05930 SM00344 helix_turn_helix ASNC type NA29_RS05985 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS05995 SM00382 ATPases associated with a variety of cellular activities NA29_RS06010 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS06030 SM00450 Rhodanese Homology Domain NA29_RS06045 SM00869 Autotransporter beta-domain NA29_RS06050 SM00869 Autotransporter beta-domain NA29_RS06060 SM00862 Transcriptional regulatory protein, C terminal NA29_RS06105 SM00421 helix_turn_helix, Lux Regulon NA29_RS06120 SM00382 ATPases associated with a variety of cellular activities NA29_RS06125 SM00382 ATPases associated with a variety of cellular activities NA29_RS06150 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS06165 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS06165 SM00895 NA29_RS06165 NA29_RS06185 SM01119 NA29_RS06185 NA29_RS06205 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS06285 SM00382 ATPases associated with a variety of cellular activities NA29_RS06315 SM00344 helix_turn_helix ASNC type NA29_RS06365 SM00267 diguanylate cyclase NA29_RS06370 SM00344 helix_turn_helix ASNC type NA29_RS06440 SM00460 Transglutaminase/protease-like homologues NA29_RS06470 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS06505 SM00829 Enoylreductase NA29_RS06520 SM00869 Autotransporter beta-domain NA29_RS06530 SM00869 Autotransporter beta-domain NA29_RS06565 SM00054 EF-hand, calcium binding motif NA29_RS06595 SM00382 ATPases associated with a variety of cellular activities NA29_RS06600 SM00382 ATPases associated with a variety of cellular activities NA29_RS06655 SM00354 helix_turn _helix lactose operon repressor NA29_RS06675 SM00382 ATPases associated with a variety of cellular activities NA29_RS06785 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS06790 SM01092 CO dehydrogenase flavoprotein C-terminal domain NA29_RS06810 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS06810 SM00895 NA29_RS06810 NA29_RS06850 SM00422 helix_turn_helix, mercury resistance NA29_RS06905 SM00481 DNA polymerase alpha chain like domain NA29_RS06915 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS06930 SM00052 Putative diguanylate phosphodiesterase NA29_RS06930 SM00267 diguanylate cyclase NA29_RS06940 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS06960 SM00487 DEAD-like helicases superfamily NA29_RS06960 SM00490 helicase superfamily c-terminal domain NA29_RS06980 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS07050 SM00479 NA29_RS07050 NA29_RS07065 SM00849 Metallo-beta-lactamase superfamily NA29_RS07070 SM00257 Lysin motif NA29_RS07095 SM00382 ATPases associated with a variety of cellular activities NA29_RS07170 SM00912 haemagglutination activity domain NA29_RS07230 SM00822 NA29_RS07230 NA29_RS07240 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS07240 SM00895 NA29_RS07240 NA29_RS07245 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain NA29_RS07255 SM00851 MGS-like domain NA29_RS07255 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NA29_RS07270 SM01103 NA29_RS07270 NA29_RS07280 SM00382 ATPases associated with a variety of cellular activities NA29_RS07310 SM00382 ATPases associated with a variety of cellular activities NA29_RS07320 SM00448 cheY-homologous receiver domain NA29_RS07320 SM00862 Transcriptional regulatory protein, C terminal NA29_RS07325 SM00387 Histidine kinase-like ATPases NA29_RS07325 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS07345 SM00855 Phosphoglycerate mutase family NA29_RS07395 SM00382 ATPases associated with a variety of cellular activities NA29_RS07405 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS07410 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS07460 SM00072 Guanylate kinase homologues. NA29_RS07460 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain NA29_RS07520 SM00382 ATPases associated with a variety of cellular activities NA29_RS07525 SM00382 ATPases associated with a variety of cellular activities NA29_RS07570 SM00052 Putative diguanylate phosphodiesterase NA29_RS07575 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS07575 SM00895 NA29_RS07575 NA29_RS07585 SM00382 ATPases associated with a variety of cellular activities NA29_RS07635 SM01236 NA29_RS07635 NA29_RS07670 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS07670 SM00895 NA29_RS07670 NA29_RS07765 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS07765 SM00866 NA29_RS07765 NA29_RS07785 SM00382 ATPases associated with a variety of cellular activities NA29_RS07790 SM00382 ATPases associated with a variety of cellular activities NA29_RS07835 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NA29_RS07845 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS07915 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs NA29_RS07915 SM00474 3'-5' exonuclease NA29_RS07915 SM00475 5'-3' exonuclease NA29_RS07915 SM00482 DNA polymerase A domain NA29_RS07935 SM00450 Rhodanese Homology Domain NA29_RS07960 SM00861 Transketolase, pyrimidine binding domain NA29_RS07985 SM00400 zinc finger NA29_RS07985 SM00493 NA29_RS07985 NA29_RS08035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS08035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS08045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS08045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS08065 SM00052 Putative diguanylate phosphodiesterase NA29_RS08095 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS08140 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS08155 SM00091 PAS domain NA29_RS08155 SM00382 ATPases associated with a variety of cellular activities NA29_RS08210 SM00420 helix_turn_helix, Deoxyribose operon repressor NA29_RS08210 SM01134 NA29_RS08210 NA29_RS08250 SM00382 ATPases associated with a variety of cellular activities NA29_RS08305 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS08330 SM00450 Rhodanese Homology Domain NA29_RS08335 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS08335 SM00871 Bacterial transcription activator, effector binding domain NA29_RS08340 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS08370 SM01060 NA29_RS08370 NA29_RS08400 SM00965 Secretin and TonB N terminus short domain NA29_RS08440 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain NA29_RS08440 SM00409 Immunoglobulin NA29_RS08465 SM00862 Transcriptional regulatory protein, C terminal NA29_RS08480 SM00382 ATPases associated with a variety of cellular activities NA29_RS08515 SM00387 Histidine kinase-like ATPases NA29_RS08515 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS08520 SM00421 helix_turn_helix, Lux Regulon NA29_RS08520 SM00448 cheY-homologous receiver domain NA29_RS08530 SM00267 diguanylate cyclase NA29_RS08545 SM00923 MbtH-like protein NA29_RS08550 SM00824 Thioesterase NA29_RS08565 SM00382 ATPases associated with a variety of cellular activities NA29_RS08575 SM00823 Phosphopantetheine attachment site NA29_RS08580 SM00823 Phosphopantetheine attachment site NA29_RS08585 SM00823 Phosphopantetheine attachment site NA29_RS08600 SM00382 ATPases associated with a variety of cellular activities NA29_RS08615 SM01006 Siderophore biosynthesis protein domain NA29_RS08640 SM00100 Cyclic nucleotide-monophosphate binding domain NA29_RS08650 SM00382 ATPases associated with a variety of cellular activities NA29_RS08670 SM00382 ATPases associated with a variety of cellular activities NA29_RS08690 SM00479 NA29_RS08690 NA29_RS08700 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS08725 SM00421 helix_turn_helix, Lux Regulon NA29_RS08725 SM00448 cheY-homologous receiver domain NA29_RS08730 SM00387 Histidine kinase-like ATPases NA29_RS08730 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS08730 SM00448 cheY-homologous receiver domain NA29_RS08755 SM00382 ATPases associated with a variety of cellular activities NA29_RS08765 SM00834 Putative regulatory protein NA29_RS08780 SM00822 NA29_RS08780 NA29_RS08785 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS08810 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS08855 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS08880 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS08900 SM00072 Guanylate kinase homologues. NA29_RS08900 SM00382 ATPases associated with a variety of cellular activities NA29_RS08905 SM01409 NA29_RS08905 NA29_RS08910 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NA29_RS08910 SM00954 Region found in RelA / SpoT proteins NA29_RS08945 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS08950 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS08975 SM00387 Histidine kinase-like ATPases NA29_RS08975 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS08980 SM00448 cheY-homologous receiver domain NA29_RS08980 SM00862 Transcriptional regulatory protein, C terminal NA29_RS09015 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NA29_RS09105 SM00257 Lysin motif NA29_RS09110 SM00917 LeuA allosteric (dimerisation) domain NA29_RS09145 SM01387 NA29_RS09145 NA29_RS09150 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS09150 SM00322 K homology RNA-binding domain NA29_RS09175 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NA29_RS09220 SM00422 helix_turn_helix, mercury resistance NA29_RS09265 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS09270 SM00563 Phosphate acyltransferases NA29_RS09290 SM00822 NA29_RS09290 NA29_RS09305 SM00421 helix_turn_helix, Lux Regulon NA29_RS09310 SM00882 Coenzyme A transferase NA29_RS09315 SM00882 Coenzyme A transferase NA29_RS09335 SM00954 Region found in RelA / SpoT proteins NA29_RS09345 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NA29_RS09370 SM00873 B3/4 domain NA29_RS09370 SM00874 tRNA synthetase B5 domain NA29_RS09370 SM00896 Ferredoxin-fold anticodon binding domain NA29_RS09375 SM00411 bacterial (prokaryotic) histone like domain NA29_RS09380 SM00422 helix_turn_helix, mercury resistance NA29_RS09385 SM00052 Putative diguanylate phosphodiesterase NA29_RS09385 SM00267 diguanylate cyclase NA29_RS09390 SM00267 diguanylate cyclase NA29_RS09425 SM00052 Putative diguanylate phosphodiesterase NA29_RS09425 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NA29_RS09425 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NA29_RS09425 SM00091 PAS domain NA29_RS09425 SM00267 diguanylate cyclase NA29_RS09440 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NA29_RS09440 SM00267 diguanylate cyclase NA29_RS09445 SM00903 Flavin reductase like domain NA29_RS09465 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS09470 SM00382 ATPases associated with a variety of cellular activities NA29_RS09505 SM01034 Sensors of blue-light using FAD NA29_RS09515 SM00267 diguanylate cyclase NA29_RS09545 SM00052 Putative diguanylate phosphodiesterase NA29_RS09545 SM00267 diguanylate cyclase NA29_RS09545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS09725 SM00028 Tetratricopeptide repeats NA29_RS09730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS09730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS09750 SM00861 Transketolase, pyrimidine binding domain NA29_RS09795 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS09835 SM00858 NA29_RS09835 NA29_RS09865 SM00028 Tetratricopeptide repeats NA29_RS09880 SM00382 ATPases associated with a variety of cellular activities NA29_RS09895 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS09895 SM00732 Likely ribonuclease with RNase H fold. NA29_RS09910 SM00491 NA29_RS09910 NA29_RS09925 SM00363 S4 RNA-binding domain NA29_RS09950 SM00822 NA29_RS09950 NA29_RS09960 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS10000 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS10030 SM00487 DEAD-like helicases superfamily NA29_RS10030 SM00490 helicase superfamily c-terminal domain NA29_RS10030 SM00982 NA29_RS10030 NA29_RS10030 SM01058 CarD-like/TRCF domain NA29_RS10055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS10055 SM00387 Histidine kinase-like ATPases NA29_RS10055 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS10060 SM00448 cheY-homologous receiver domain NA29_RS10060 SM00862 Transcriptional regulatory protein, C terminal NA29_RS10190 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS10235 SM01209 NA29_RS10235 NA29_RS10240 SM01209 NA29_RS10240 NA29_RS10245 SM00382 ATPases associated with a variety of cellular activities NA29_RS10320 SM00822 NA29_RS10320 NA29_RS10345 SM00382 ATPases associated with a variety of cellular activities NA29_RS10345 SM00994 ClpX C4-type zinc finger NA29_RS10345 SM01086 C-terminal, D2-small domain, of ClpB protein NA29_RS10350 SM00382 ATPases associated with a variety of cellular activities NA29_RS10350 SM00464 Found in ATP-dependent protease La (LON) NA29_RS10355 SM00411 bacterial (prokaryotic) histone like domain NA29_RS10380 SM00382 ATPases associated with a variety of cellular activities NA29_RS10400 SM01211 NA29_RS10400 NA29_RS10450 SM00382 ATPases associated with a variety of cellular activities NA29_RS10455 SM00382 ATPases associated with a variety of cellular activities NA29_RS10475 SM00829 Enoylreductase NA29_RS10515 SM00248 ankyrin repeats NA29_RS10545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS10545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS10550 SM00387 Histidine kinase-like ATPases NA29_RS10550 SM00448 cheY-homologous receiver domain NA29_RS10565 SM00344 helix_turn_helix ASNC type NA29_RS10575 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS10575 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NA29_RS10585 SM00382 ATPases associated with a variety of cellular activities NA29_RS10615 SM00972 Spore Coat Protein U domain NA29_RS10630 SM00881 CoA binding domain NA29_RS10655 SM00421 helix_turn_helix, Lux Regulon NA29_RS10655 SM00448 cheY-homologous receiver domain NA29_RS10660 SM00387 Histidine kinase-like ATPases NA29_RS10660 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS10660 SM00448 cheY-homologous receiver domain NA29_RS10765 SM00028 Tetratricopeptide repeats NA29_RS10825 SM00822 NA29_RS10825 NA29_RS10855 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NA29_RS10855 SM00267 diguanylate cyclase NA29_RS10895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS10895 SM00387 Histidine kinase-like ATPases NA29_RS10895 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS10900 SM00448 cheY-homologous receiver domain NA29_RS10900 SM00862 Transcriptional regulatory protein, C terminal NA29_RS10915 SM00382 ATPases associated with a variety of cellular activities NA29_RS10925 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. NA29_RS10930 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS10955 SM00849 Metallo-beta-lactamase superfamily NA29_RS11015 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS11035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS11035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS11040 SM01130 NA29_RS11040 NA29_RS11050 SM00382 ATPases associated with a variety of cellular activities NA29_RS11055 SM00382 ATPases associated with a variety of cellular activities NA29_RS11055 SM00448 cheY-homologous receiver domain NA29_RS11065 SM00155 Phospholipase D. Active site motifs. NA29_RS11085 SM00091 PAS domain NA29_RS11085 SM00267 diguanylate cyclase NA29_RS11090 SM00901 NA29_RS11090 NA29_RS11100 SM00422 helix_turn_helix, mercury resistance NA29_RS11110 SM00965 Secretin and TonB N terminus short domain NA29_RS11125 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS11165 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS11165 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS11210 SM00387 Histidine kinase-like ATPases NA29_RS11215 SM00421 helix_turn_helix, Lux Regulon NA29_RS11215 SM00448 cheY-homologous receiver domain NA29_RS11265 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS11265 SM00895 NA29_RS11265 NA29_RS11310 SM00382 ATPases associated with a variety of cellular activities NA29_RS11320 SM01130 NA29_RS11320 NA29_RS11365 SM00448 cheY-homologous receiver domain NA29_RS11365 SM00862 Transcriptional regulatory protein, C terminal NA29_RS11370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS11370 SM00387 Histidine kinase-like ATPases NA29_RS11370 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS11380 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS11410 SM00382 ATPases associated with a variety of cellular activities NA29_RS11455 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS11455 SM00866 NA29_RS11455 NA29_RS11480 SM00382 ATPases associated with a variety of cellular activities NA29_RS11510 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS11520 SM01119 NA29_RS11520 NA29_RS11565 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS11595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS11595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS11615 SM00422 helix_turn_helix, mercury resistance NA29_RS11665 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS11675 SM00422 helix_turn_helix, mercury resistance NA29_RS11695 SM00382 ATPases associated with a variety of cellular activities NA29_RS11775 SM00382 ATPases associated with a variety of cellular activities NA29_RS11785 SM00267 diguanylate cyclase NA29_RS11815 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS11815 SM00866 NA29_RS11815 NA29_RS11825 SM00382 ATPases associated with a variety of cellular activities NA29_RS11855 SM00354 helix_turn _helix lactose operon repressor NA29_RS11880 SM00822 NA29_RS11880 NA29_RS11890 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS11900 SM00870 NA29_RS11900 NA29_RS11925 SM00829 Enoylreductase NA29_RS11930 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS11970 SM00849 Metallo-beta-lactamase superfamily NA29_RS11970 SM01027 Beta-Casp domain NA29_RS11985 SM00421 helix_turn_helix, Lux Regulon NA29_RS11985 SM00448 cheY-homologous receiver domain NA29_RS11990 SM00100 Cyclic nucleotide-monophosphate binding domain NA29_RS11990 SM00419 helix_turn_helix, cAMP Regulatory protein NA29_RS11995 SM00829 Enoylreductase NA29_RS12000 SM00091 PAS domain NA29_RS12000 SM00387 Histidine kinase-like ATPases NA29_RS12010 SM00829 Enoylreductase NA29_RS12015 SM01400 NA29_RS12015 NA29_RS12020 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain NA29_RS12045 SM00749 bacterial OsmY and nodulation domain NA29_RS12110 SM01160 NA29_RS12110 NA29_RS12135 SM00749 bacterial OsmY and nodulation domain NA29_RS12170 SM00869 Autotransporter beta-domain NA29_RS12205 SM00947 Carbonic anhydrase NA29_RS12210 SM00422 helix_turn_helix, mercury resistance NA29_RS12265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS12270 SM00226 Low molecular weight phosphatase family NA29_RS12300 SM00421 helix_turn_helix, Lux Regulon NA29_RS12325 SM00267 diguanylate cyclase NA29_RS12385 SM00448 cheY-homologous receiver domain NA29_RS12385 SM00862 Transcriptional regulatory protein, C terminal NA29_RS12390 SM00387 Histidine kinase-like ATPases NA29_RS12390 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS12425 SM00448 cheY-homologous receiver domain NA29_RS12425 SM00862 Transcriptional regulatory protein, C terminal NA29_RS12460 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS12500 SM00749 bacterial OsmY and nodulation domain NA29_RS12510 SM00267 diguanylate cyclase NA29_RS12525 SM00052 Putative diguanylate phosphodiesterase NA29_RS12525 SM00267 diguanylate cyclase NA29_RS12570 SM00829 Enoylreductase NA29_RS12585 SM00382 ATPases associated with a variety of cellular activities NA29_RS12590 SM00382 ATPases associated with a variety of cellular activities NA29_RS12605 SM00382 ATPases associated with a variety of cellular activities NA29_RS12605 SM00843 NA29_RS12605 NA29_RS12615 SM00052 Putative diguanylate phosphodiesterase NA29_RS12615 SM00267 diguanylate cyclase NA29_RS12625 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS12640 SM00869 Autotransporter beta-domain NA29_RS12645 SM00267 diguanylate cyclase NA29_RS12650 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS12665 SM00382 ATPases associated with a variety of cellular activities NA29_RS12735 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS12735 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NA29_RS12740 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NA29_RS12795 SM00822 NA29_RS12795 NA29_RS12825 SM00411 bacterial (prokaryotic) histone like domain NA29_RS12830 SM00880 NA29_RS12830 NA29_RS12840 SM00422 helix_turn_helix, mercury resistance NA29_RS12850 SM00052 Putative diguanylate phosphodiesterase NA29_RS12855 SM00267 diguanylate cyclase NA29_RS12880 SM00382 ATPases associated with a variety of cellular activities NA29_RS12900 SM00382 ATPases associated with a variety of cellular activities NA29_RS12940 SM00460 Transglutaminase/protease-like homologues NA29_RS12985 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS12985 SM00895 NA29_RS12985 NA29_RS13005 SM00382 ATPases associated with a variety of cellular activities NA29_RS13010 SM00382 ATPases associated with a variety of cellular activities NA29_RS13020 SM00464 Found in ATP-dependent protease La (LON) NA29_RS13090 SM00869 Autotransporter beta-domain NA29_RS13110 SM00421 helix_turn_helix, Lux Regulon NA29_RS13110 SM00448 cheY-homologous receiver domain NA29_RS13115 SM00387 Histidine kinase-like ATPases NA29_RS13130 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS13130 SM01240 NA29_RS13130 NA29_RS13155 SM00244 prohibitin homologues NA29_RS13205 SM00935 Outer membrane protein (OmpH-like) NA29_RS13215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NA29_RS13265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NA29_RS13270 SM00363 S4 RNA-binding domain NA29_RS13280 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NA29_RS13280 SM00292 breast cancer carboxy-terminal domain NA29_RS13280 SM00532 Ligase N family NA29_RS13285 SM00771 ZipA, C-terminal domain (FtsZ-binding) NA29_RS13290 SM00968 SMC proteins Flexible Hinge Domain NA29_RS13325 SM00155 Phospholipase D. Active site motifs. NA29_RS13330 SM00382 ATPases associated with a variety of cellular activities NA29_RS13340 SM00382 ATPases associated with a variety of cellular activities NA29_RS13345 SM01005 Alanine racemase, C-terminal domain NA29_RS13365 SM00986 Uracil DNA glycosylase superfamily NA29_RS13365 SM00987 UreE urease accessory protein, C-terminal domain NA29_RS13380 SM00487 DEAD-like helicases superfamily NA29_RS13380 SM00490 helicase superfamily c-terminal domain NA29_RS13430 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS13435 SM00448 cheY-homologous receiver domain NA29_RS13435 SM00850 LytTr DNA-binding domain NA29_RS13440 SM00387 Histidine kinase-like ATPases NA29_RS13450 SM00382 ATPases associated with a variety of cellular activities NA29_RS13450 SM01086 C-terminal, D2-small domain, of ClpB protein NA29_RS13470 SM00852 Probable molybdopterin binding domain NA29_RS13535 SM00670 Large family of predicted nucleotide-binding domains NA29_RS13560 SM00382 ATPases associated with a variety of cellular activities NA29_RS13605 SM00870 NA29_RS13605 NA29_RS13615 SM00382 ATPases associated with a variety of cellular activities NA29_RS13685 SM00838 Elongation factor G C-terminus NA29_RS13690 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS13730 SM00357 Cold shock protein domain NA29_RS13750 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS13750 SM00322 K homology RNA-binding domain NA29_RS13760 SM00363 S4 RNA-binding domain NA29_RS13770 SM00100 Cyclic nucleotide-monophosphate binding domain NA29_RS13770 SM00419 helix_turn_helix, cAMP Regulatory protein NA29_RS13785 SM00829 Enoylreductase NA29_RS13790 SM00852 Probable molybdopterin binding domain NA29_RS13805 SM00382 ATPases associated with a variety of cellular activities NA29_RS13805 SM00487 DEAD-like helicases superfamily NA29_RS13805 SM00490 helicase superfamily c-terminal domain NA29_RS13805 SM00847 Helicase associated domain (HA2) Add an annotation NA29_RS13845 SM00967 RNA 2'-O ribose methyltransferase substrate binding NA29_RS13850 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS13850 SM00357 Cold shock protein domain NA29_RS13850 SM00955 NA29_RS13850 NA29_RS13880 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS13895 SM00382 ATPases associated with a variety of cellular activities NA29_RS13925 SM00822 NA29_RS13925 NA29_RS13940 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS13940 SM00895 NA29_RS13940 NA29_RS13985 SM00382 ATPases associated with a variety of cellular activities NA29_RS13985 SM00448 cheY-homologous receiver domain NA29_RS13990 SM00387 Histidine kinase-like ATPases NA29_RS13990 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS13995 SM01230 NA29_RS13995 NA29_RS14000 SM00450 Rhodanese Homology Domain NA29_RS14060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS14060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS14065 SM00838 Elongation factor G C-terminus NA29_RS14065 SM00889 Elongation factor G, domain IV NA29_RS14080 SM00862 Transcriptional regulatory protein, C terminal NA29_RS14085 SM00636 NA29_RS14085 NA29_RS14110 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS14110 SM00895 NA29_RS14110 NA29_RS14120 SM00267 diguanylate cyclase NA29_RS14125 SM00357 Cold shock protein domain NA29_RS14140 SM00822 NA29_RS14140 NA29_RS14155 SM00849 Metallo-beta-lactamase superfamily NA29_RS14190 SM00357 Cold shock protein domain NA29_RS14250 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS14250 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NA29_RS14275 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS14325 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NA29_RS14325 SM00091 PAS domain NA29_RS14325 SM00387 Histidine kinase-like ATPases NA29_RS14325 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS14330 SM00421 helix_turn_helix, Lux Regulon NA29_RS14330 SM00448 cheY-homologous receiver domain NA29_RS14355 SM00788 Adenylosuccinate synthetase NA29_RS14370 SM00244 prohibitin homologues NA29_RS14375 SM00244 prohibitin homologues NA29_RS14395 SM00564 beta-propeller repeat NA29_RS14415 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS14425 SM00562 NA29_RS14425 NA29_RS14450 SM00257 Lysin motif NA29_RS14470 SM00382 ATPases associated with a variety of cellular activities NA29_RS14485 SM00421 helix_turn_helix, Lux Regulon NA29_RS14530 SM00382 ATPases associated with a variety of cellular activities NA29_RS14535 SM00493 NA29_RS14535 NA29_RS14545 SM00382 ATPases associated with a variety of cellular activities NA29_RS14560 SM00357 Cold shock protein domain NA29_RS14560 SM00382 ATPases associated with a variety of cellular activities NA29_RS14560 SM00959 Rho termination factor, N-terminal domain NA29_RS14565 SM00028 Tetratricopeptide repeats NA29_RS14585 SM00382 ATPases associated with a variety of cellular activities NA29_RS14630 SM00977 TilS substrate C-terminal domain NA29_RS14640 SM00478 endonuclease III NA29_RS14645 SM00840 NA29_RS14645 NA29_RS14650 SM00028 Tetratricopeptide repeats NA29_RS14695 SM00382 ATPases associated with a variety of cellular activities NA29_RS14715 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS14800 SM00859 Semialdehyde dehydrogenase, NAD binding domain NA29_RS14805 SM01329 NA29_RS14805 NA29_RS14855 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS14855 SM00866 NA29_RS14855 NA29_RS14875 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS14875 SM00478 endonuclease III NA29_RS14875 SM01009 AlkA N-terminal domain NA29_RS14905 SM00631 NA29_RS14905 NA29_RS14940 SM00855 Phosphoglycerate mutase family NA29_RS15045 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NA29_RS15050 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NA29_RS15095 SM00829 Enoylreductase NA29_RS15100 SM00421 helix_turn_helix, Lux Regulon NA29_RS15105 SM00267 diguanylate cyclase NA29_RS15105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS15110 SM00533 DNA-binding domain of DNA mismatch repair MUTS family NA29_RS15110 SM00534 ATPase domain of DNA mismatch repair MUTS family NA29_RS15125 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. NA29_RS15135 SM00849 Metallo-beta-lactamase superfamily NA29_RS15145 SM01130 NA29_RS15145 NA29_RS15170 SM00481 DNA polymerase alpha chain like domain NA29_RS15205 SM01192 NA29_RS15205 NA29_RS15205 SM01193 NA29_RS15205 NA29_RS15225 SM00849 Metallo-beta-lactamase superfamily NA29_RS15235 SM00382 ATPases associated with a variety of cellular activities NA29_RS15265 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS15330 SM00271 DnaJ molecular chaperone homology domain NA29_RS15365 SM00226 Low molecular weight phosphatase family NA29_RS15370 SM00487 DEAD-like helicases superfamily NA29_RS15370 SM00490 helicase superfamily c-terminal domain NA29_RS15395 SM00478 endonuclease III NA29_RS15425 SM00382 ATPases associated with a variety of cellular activities NA29_RS15450 SM00986 Uracil DNA glycosylase superfamily NA29_RS15450 SM00987 UreE urease accessory protein, C-terminal domain NA29_RS15460 SM00387 Histidine kinase-like ATPases NA29_RS15465 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS15510 SM00434 DNA Topoisomerase IV NA29_RS15525 SM00387 Histidine kinase-like ATPases NA29_RS15525 SM00433 TopoisomeraseII NA29_RS15530 SM00382 ATPases associated with a variety of cellular activities NA29_RS15625 SM00382 ATPases associated with a variety of cellular activities NA29_RS15640 SM00267 diguanylate cyclase NA29_RS15645 SM00382 ATPases associated with a variety of cellular activities NA29_RS15650 SM00382 ATPases associated with a variety of cellular activities NA29_RS15680 SM00852 Probable molybdopterin binding domain NA29_RS15685 SM00479 NA29_RS15685 NA29_RS15750 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS15755 SM00344 helix_turn_helix ASNC type NA29_RS15765 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NA29_RS15765 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NA29_RS15835 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS15885 SM00477 DNA/RNA non-specific endonuclease NA29_RS15885 SM00892 DNA/RNA non-specific endonuclease NA29_RS15910 SM00014 Acid phosphatase homologues NA29_RS15935 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS16005 SM00829 Enoylreductase NA29_RS16060 SM00148 Phospholipase C, catalytic domain (part); domain X NA29_RS16065 SM00354 helix_turn _helix lactose operon repressor NA29_RS16095 SM00903 Flavin reductase like domain NA29_RS16120 SM00344 helix_turn_helix ASNC type NA29_RS16125 SM00420 helix_turn_helix, Deoxyribose operon repressor NA29_RS16125 SM01134 NA29_RS16125 NA29_RS16140 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS16160 SM00831 Cation transporter/ATPase, N-terminus NA29_RS16180 SM00965 Secretin and TonB N terminus short domain NA29_RS16220 SM00382 ATPases associated with a variety of cellular activities NA29_RS16225 SM00382 ATPases associated with a variety of cellular activities NA29_RS16245 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS16260 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS16260 SM00895 NA29_RS16260 NA29_RS16275 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS16320 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS16370 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS16390 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS16390 SM00895 NA29_RS16390 NA29_RS16395 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS16395 SM00895 NA29_RS16395 NA29_RS16425 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NA29_RS16425 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NA29_RS16455 SM00091 PAS domain NA29_RS16480 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS16480 SM00895 NA29_RS16480 NA29_RS16490 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NA29_RS16495 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS16495 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NA29_RS16585 SM00382 ATPases associated with a variety of cellular activities NA29_RS16625 SM00382 ATPases associated with a variety of cellular activities NA29_RS16665 SM00822 NA29_RS16665 NA29_RS16670 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS16685 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS16700 SM00893 Electron transfer flavoprotein domain NA29_RS16705 SM00893 Electron transfer flavoprotein domain NA29_RS16725 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS16725 SM00895 NA29_RS16725 NA29_RS16740 SM00912 haemagglutination activity domain NA29_RS16760 SM00972 Spore Coat Protein U domain NA29_RS16775 SM00972 Spore Coat Protein U domain NA29_RS16790 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS16800 SM00859 Semialdehyde dehydrogenase, NAD binding domain NA29_RS16820 SM00411 bacterial (prokaryotic) histone like domain NA29_RS16825 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS16885 SM00861 Transketolase, pyrimidine binding domain NA29_RS16905 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS16990 SM00421 helix_turn_helix, Lux Regulon NA29_RS16990 SM00448 cheY-homologous receiver domain NA29_RS16995 SM00387 Histidine kinase-like ATPases NA29_RS17030 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS17040 SM00382 ATPases associated with a variety of cellular activities NA29_RS17075 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS17080 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS17100 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS17125 SM00420 helix_turn_helix, Deoxyribose operon repressor NA29_RS17125 SM01134 NA29_RS17125 NA29_RS17135 SM00859 Semialdehyde dehydrogenase, NAD binding domain NA29_RS17190 SM00822 NA29_RS17190 NA29_RS17195 SM00448 cheY-homologous receiver domain NA29_RS17195 SM00862 Transcriptional regulatory protein, C terminal NA29_RS17225 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NA29_RS17245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS17245 SM00387 Histidine kinase-like ATPases NA29_RS17245 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS17265 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS17280 SM00382 ATPases associated with a variety of cellular activities NA29_RS17285 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS17295 SM00382 ATPases associated with a variety of cellular activities NA29_RS17340 SM00833 Cobalamin synthesis protein cobW C-terminal domain NA29_RS17345 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS17345 SM00895 NA29_RS17345 NA29_RS17405 SM01007 Class II Aldolase and Adducin N-terminal domain NA29_RS17430 SM00382 ATPases associated with a variety of cellular activities NA29_RS17440 SM00843 NA29_RS17440 NA29_RS17450 SM00463 Small MutS-related domain NA29_RS17460 SM00938 Nitrogen regulatory protein P-II NA29_RS17495 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS17500 SM01130 NA29_RS17500 NA29_RS17510 SM00382 ATPases associated with a variety of cellular activities NA29_RS17565 SM00830 Chorismate mutase type II NA29_RS17605 SM00344 helix_turn_helix ASNC type NA29_RS17705 SM00382 ATPases associated with a variety of cellular activities NA29_RS17740 SM00893 Electron transfer flavoprotein domain NA29_RS17745 SM00893 Electron transfer flavoprotein domain NA29_RS17795 SM00984 UDP binding domain NA29_RS17800 SM00028 Tetratricopeptide repeats NA29_RS17810 SM00411 bacterial (prokaryotic) histone like domain NA29_RS17815 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS17840 SM00830 Chorismate mutase type II NA29_RS17855 SM00434 DNA Topoisomerase IV NA29_RS17910 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS17910 SM00895 NA29_RS17910 NA29_RS18135 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS18155 SM00028 Tetratricopeptide repeats NA29_RS18170 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS18230 SM00822 NA29_RS18230 NA29_RS18235 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS18250 SM00822 NA29_RS18250 NA29_RS18260 SM00382 ATPases associated with a variety of cellular activities NA29_RS18275 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS18285 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS18320 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS18350 SM01130 NA29_RS18350 NA29_RS18365 SM00831 Cation transporter/ATPase, N-terminus NA29_RS18375 SM00014 Acid phosphatase homologues NA29_RS18445 SM00382 ATPases associated with a variety of cellular activities NA29_RS18450 SM00382 ATPases associated with a variety of cellular activities NA29_RS18460 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS18505 SM00052 Putative diguanylate phosphodiesterase NA29_RS18505 SM00267 diguanylate cyclase NA29_RS18520 SM00382 ATPases associated with a variety of cellular activities NA29_RS18520 SM00930 NA29_RS18520 NA29_RS18525 SM00448 cheY-homologous receiver domain NA29_RS18530 SM00421 helix_turn_helix, Lux Regulon NA29_RS18530 SM00448 cheY-homologous receiver domain NA29_RS18550 SM00387 Histidine kinase-like ATPases NA29_RS18575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS18610 SM00448 cheY-homologous receiver domain NA29_RS18610 SM00862 Transcriptional regulatory protein, C terminal NA29_RS18615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS18615 SM00387 Histidine kinase-like ATPases NA29_RS18615 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS18625 SM00382 ATPases associated with a variety of cellular activities NA29_RS18655 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS18690 SM00382 ATPases associated with a variety of cellular activities NA29_RS18725 SM00487 DEAD-like helicases superfamily NA29_RS18725 SM00490 helicase superfamily c-terminal domain NA29_RS18745 SM00346 helix_turn_helix isocitrate lyase regulation NA29_RS18770 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS18775 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS18800 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS18815 SM00998 Adenylosuccinate lyase C-terminus NA29_RS18870 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS18875 SM00448 cheY-homologous receiver domain NA29_RS18895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS18895 SM00387 Histidine kinase-like ATPases NA29_RS18935 SM00382 ATPases associated with a variety of cellular activities NA29_RS18940 SM00382 ATPases associated with a variety of cellular activities NA29_RS18980 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS19000 SM00382 ATPases associated with a variety of cellular activities NA29_RS19080 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS19085 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS19095 SM00429 ig-like, plexins, transcription factors NA29_RS19095 SM00869 Autotransporter beta-domain NA29_RS19150 SM01012 NA29_RS19150 NA29_RS19160 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS19180 SM00903 Flavin reductase like domain NA29_RS19215 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS19245 SM00421 helix_turn_helix, Lux Regulon NA29_RS19290 SM00248 ankyrin repeats NA29_RS19325 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS19365 SM00822 NA29_RS19365 NA29_RS19375 SM00382 ATPases associated with a variety of cellular activities NA29_RS19395 SM00829 Enoylreductase NA29_RS19400 SM00851 MGS-like domain NA29_RS19430 SM01209 NA29_RS19430 NA29_RS19430 SM01210 NA29_RS19430 NA29_RS19475 SM00382 ATPases associated with a variety of cellular activities NA29_RS19490 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS19525 SM00382 ATPases associated with a variety of cellular activities NA29_RS19530 SM00341 Helicase and RNase D C-terminal NA29_RS19530 SM00487 DEAD-like helicases superfamily NA29_RS19530 SM00490 helicase superfamily c-terminal domain NA29_RS19530 SM00956 NA29_RS19530 NA29_RS19545 SM00481 DNA polymerase alpha chain like domain NA29_RS19550 SM00450 Rhodanese Homology Domain NA29_RS19560 SM00487 DEAD-like helicases superfamily NA29_RS19560 SM00490 helicase superfamily c-terminal domain NA29_RS19605 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS19605 SM01091 Transporter associated domain NA29_RS19610 SM00382 ATPases associated with a variety of cellular activities NA29_RS19630 SM00421 helix_turn_helix, Lux Regulon NA29_RS19630 SM00448 cheY-homologous receiver domain NA29_RS19655 SM00448 cheY-homologous receiver domain NA29_RS19655 SM00862 Transcriptional regulatory protein, C terminal NA29_RS19660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS19660 SM00387 Histidine kinase-like ATPases NA29_RS19660 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS19665 SM00528 Domain in histone-like proteins of HNS family NA29_RS19690 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS19695 SM00849 Metallo-beta-lactamase superfamily NA29_RS19715 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS19730 SM00919 Malic enzyme, NAD binding domain NA29_RS19730 SM01274 NA29_RS19730 NA29_RS19745 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS19755 SM00052 Putative diguanylate phosphodiesterase NA29_RS19755 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NA29_RS19755 SM00091 PAS domain NA29_RS19755 SM00267 diguanylate cyclase NA29_RS19790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS19790 SM00387 Histidine kinase-like ATPases NA29_RS19790 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS19795 SM00448 cheY-homologous receiver domain NA29_RS19795 SM00862 Transcriptional regulatory protein, C terminal NA29_RS19810 SM00382 ATPases associated with a variety of cellular activities NA29_RS19845 SM00382 ATPases associated with a variety of cellular activities NA29_RS19850 SM00382 ATPases associated with a variety of cellular activities NA29_RS19930 SM00904 Riboflavin kinase NA29_RS19965 SM00382 ATPases associated with a variety of cellular activities NA29_RS19965 SM01086 C-terminal, D2-small domain, of ClpB protein NA29_RS19975 SM00357 Cold shock protein domain NA29_RS20010 SM00822 NA29_RS20010 NA29_RS20040 SM01329 NA29_RS20040 NA29_RS20065 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NA29_RS20110 SM00822 NA29_RS20110 NA29_RS20165 SM01207 NA29_RS20165 NA29_RS20170 SM00421 helix_turn_helix, Lux Regulon NA29_RS20170 SM00448 cheY-homologous receiver domain NA29_RS20220 SM00646 NA29_RS20220 NA29_RS20230 SM00853 MutL C terminal dimerisation domain NA29_RS20230 SM01340 NA29_RS20230 NA29_RS20245 SM00382 ATPases associated with a variety of cellular activities NA29_RS20310 SM00387 Histidine kinase-like ATPases NA29_RS20310 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS20315 SM00448 cheY-homologous receiver domain NA29_RS20315 SM00862 Transcriptional regulatory protein, C terminal NA29_RS20320 SM00382 ATPases associated with a variety of cellular activities NA29_RS20340 SM00271 DnaJ molecular chaperone homology domain NA29_RS20365 SM00363 S4 RNA-binding domain NA29_RS20445 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS20470 SM00644 NA29_RS20470 NA29_RS20500 SM00344 helix_turn_helix ASNC type NA29_RS20515 SM00382 ATPases associated with a variety of cellular activities NA29_RS20520 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS20520 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NA29_RS20565 SM00822 NA29_RS20565 NA29_RS20690 SM00858 NA29_RS20690 NA29_RS20695 SM01130 NA29_RS20695 NA29_RS20720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS20735 SM00382 ATPases associated with a variety of cellular activities NA29_RS20745 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NA29_RS20755 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS20755 SM00895 NA29_RS20755 NA29_RS20765 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS20780 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS20795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NA29_RS20825 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS20855 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NA29_RS20855 SM00465 GIY-YIG type nucleases (URI domain) NA29_RS20865 SM00841 Elongation factor P, C-terminal NA29_RS20865 SM01185 NA29_RS20865 NA29_RS20895 SM00358 Double-stranded RNA binding motif NA29_RS20895 SM00535 Ribonuclease III family NA29_RS20905 SM00838 Elongation factor G C-terminus NA29_RS20915 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NA29_RS20935 SM00825 Beta-ketoacyl synthase NA29_RS20940 SM00823 Phosphopantetheine attachment site NA29_RS20945 SM00822 NA29_RS20945 NA29_RS20950 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. NA29_RS21000 SM00363 S4 RNA-binding domain NA29_RS21005 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS21010 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS21025 SM00852 Probable molybdopterin binding domain NA29_RS21085 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS21085 SM00895 NA29_RS21085 NA29_RS21125 SM01091 Transporter associated domain NA29_RS21130 SM00421 helix_turn_helix, Lux Regulon NA29_RS21145 SM00357 Cold shock protein domain NA29_RS21150 SM00257 Lysin motif NA29_RS21210 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS21210 SM00895 NA29_RS21210 NA29_RS21220 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS21220 SM00448 cheY-homologous receiver domain NA29_RS21225 SM00387 Histidine kinase-like ATPases NA29_RS21225 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS21225 SM00448 cheY-homologous receiver domain NA29_RS21280 SM00267 diguanylate cyclase NA29_RS21280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS21290 SM00052 Putative diguanylate phosphodiesterase NA29_RS21290 SM00091 PAS domain NA29_RS21290 SM00267 diguanylate cyclase NA29_RS21295 SM00829 Enoylreductase NA29_RS21305 SM00287 Bacterial SH3 domain homologues NA29_RS21355 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS21440 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS21465 SM00869 Autotransporter beta-domain NA29_RS21575 SM00650 Ribosomal RNA adenine dimethylases NA29_RS21580 SM00450 Rhodanese Homology Domain NA29_RS21640 SM00563 Phosphate acyltransferases NA29_RS21655 SM00732 Likely ribonuclease with RNase H fold. NA29_RS21695 SM00881 CoA binding domain NA29_RS21715 SM00382 ATPases associated with a variety of cellular activities NA29_RS21720 SM00448 cheY-homologous receiver domain NA29_RS21720 SM00862 Transcriptional regulatory protein, C terminal NA29_RS21725 SM00387 Histidine kinase-like ATPases NA29_RS21725 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS21770 SM00028 Tetratricopeptide repeats NA29_RS21780 SM00382 ATPases associated with a variety of cellular activities NA29_RS21800 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS21805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS21805 SM01049 NA29_RS21805 NA29_RS21865 SM00267 diguanylate cyclase NA29_RS21885 SM00763 PrkA AAA domain NA29_RS21890 SM00382 ATPases associated with a variety of cellular activities NA29_RS21905 SM00729 Elongator protein 3, MiaB family, Radical SAM NA29_RS21925 SM01091 Transporter associated domain NA29_RS21940 SM00836 DALR anticodon binding domain NA29_RS21950 SM00563 Phosphate acyltransferases NA29_RS21975 SM00650 Ribosomal RNA adenine dimethylases NA29_RS22005 SM01011 Aminopeptidase P, N-terminal domain NA29_RS22025 SM00798 AICARFT/IMPCHase bienzyme NA29_RS22025 SM00851 MGS-like domain NA29_RS22040 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NA29_RS22050 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS22100 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NA29_RS22105 SM00861 Transketolase, pyrimidine binding domain NA29_RS22140 SM00919 Malic enzyme, NAD binding domain NA29_RS22140 SM01274 NA29_RS22140 NA29_RS22160 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family NA29_RS22195 SM00955 NA29_RS22195 NA29_RS22230 SM00878 Biotin carboxylase C-terminal domain NA29_RS22280 SM00644 NA29_RS22280 NA29_RS22300 SM00382 ATPases associated with a variety of cellular activities NA29_RS22300 SM00962 SRP54-type protein, GTPase domain NA29_RS22300 SM00963 SRP54-type protein, helical bundle domain NA29_RS22330 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase NA29_RS22360 SM01091 Transporter associated domain NA29_RS22365 SM00382 ATPases associated with a variety of cellular activities NA29_RS22400 SM00382 ATPases associated with a variety of cellular activities NA29_RS22410 SM00957 SecA DEAD-like domain NA29_RS22410 SM00958 SecA preprotein cross-linking domain NA29_RS22425 SM00864 Tubulin/FtsZ family, GTPase domain NA29_RS22425 SM00865 Tubulin/FtsZ family, C-terminal domain NA29_RS22430 SM00842 Cell division protein FtsA NA29_RS22510 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS22520 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NA29_RS22560 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS22560 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NA29_RS22595 SM00925 MltA specific insert domain NA29_RS22635 SM00382 ATPases associated with a variety of cellular activities NA29_RS22650 SM00387 Histidine kinase-like ATPases NA29_RS22650 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS22655 SM00448 cheY-homologous receiver domain NA29_RS22655 SM00862 Transcriptional regulatory protein, C terminal NA29_RS22685 SM01118 NA29_RS22685 NA29_RS22690 SM00986 Uracil DNA glycosylase superfamily NA29_RS22690 SM00987 UreE urease accessory protein, C-terminal domain NA29_RS22725 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NA29_RS22755 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS22755 SM00895 NA29_RS22755 NA29_RS22800 SM00937 NA29_RS22800 NA29_RS22840 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NA29_RS22840 SM00091 PAS domain NA29_RS22840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS22845 SM00138 Methyltransferase, chemotaxis proteins NA29_RS22855 SM00260 Two component signalling adaptor domain NA29_RS22870 SM00382 ATPases associated with a variety of cellular activities NA29_RS22900 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS22905 SM00116 Domain in cystathionine beta-synthase and other proteins. NA29_RS23015 SM00382 ATPases associated with a variety of cellular activities NA29_RS23115 SM00912 haemagglutination activity domain NA29_RS23130 SM00912 haemagglutination activity domain NA29_RS23155 SM00901 NA29_RS23155 NA29_RS23325 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS23420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NA29_RS23520 SM00382 ATPases associated with a variety of cellular activities NA29_RS23550 SM00382 ATPases associated with a variety of cellular activities NA29_RS23580 SM00382 ATPases associated with a variety of cellular activities NA29_RS23585 SM00822 NA29_RS23585 NA29_RS23620 SM01321 NA29_RS23620 NA29_RS23645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NA29_RS23680 SM01219 NA29_RS23680 NA29_RS23720 SM01004 Delta-aminolevulinic acid dehydratase NA29_RS23740 SM00662 RNA polymerases D NA29_RS23745 SM00363 S4 RNA-binding domain NA29_RS23745 SM01390 NA29_RS23745 NA29_RS23765 SM00316 Ribosomal protein S1-like RNA-binding domain NA29_RS23815 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. NA29_RS23820 SM01374 NA29_RS23820 NA29_RS23840 SM00322 K homology RNA-binding domain NA29_RS23855 SM01382 NA29_RS23855 NA29_RS23855 SM01383 NA29_RS23855 NA29_RS23875 SM01403 NA29_RS23875 NA29_RS23885 SM00838 Elongation factor G C-terminus NA29_RS23885 SM00889 Elongation factor G, domain IV NA29_RS23900 SM00345 helix_turn_helix gluconate operon transcriptional repressor NA29_RS23915 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS23945 SM00710 Parallel beta-helix repeats NA29_RS23945 SM00869 Autotransporter beta-domain NA29_RS24015 SM00663 RNA polymerase I subunit A N-terminus NA29_RS24040 SM00649 Ribosomal protein L11/L12 NA29_RS24045 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. NA29_RS24045 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. NA29_RS24115 SM00155 Phospholipase D. Active site motifs. NA29_RS24120 SM00965 Secretin and TonB N terminus short domain NA29_RS24140 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS24155 SM00342 helix_turn_helix, arabinose operon control protein NA29_RS24200 SM00344 helix_turn_helix ASNC type NA29_RS24215 SM00919 Malic enzyme, NAD binding domain NA29_RS24215 SM01274 NA29_RS24215 NA29_RS24235 SM00530 Helix-turn-helix XRE-family like proteins NA29_RS24260 SM00487 DEAD-like helicases superfamily NA29_RS24260 SM00490 helicase superfamily c-terminal domain NA29_RS24500 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NA29_RS24520 SM00749 bacterial OsmY and nodulation domain NA29_RS24540 SM00382 ATPases associated with a variety of cellular activities NA29_RS24560 SM00849 Metallo-beta-lactamase superfamily NA29_RS24590 SM00881 CoA binding domain NA29_RS24600 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS24610 SM00487 DEAD-like helicases superfamily NA29_RS24610 SM00490 helicase superfamily c-terminal domain NA29_RS24695 SM00869 Autotransporter beta-domain NA29_RS24710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS24710 SM00387 Histidine kinase-like ATPases NA29_RS24710 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS24715 SM00448 cheY-homologous receiver domain NA29_RS24715 SM00862 Transcriptional regulatory protein, C terminal NA29_RS24735 SM00382 ATPases associated with a variety of cellular activities NA29_RS24740 SM00062 Bacterial periplasmic substrate-binding proteins NA29_RS24745 SM00448 cheY-homologous receiver domain NA29_RS24745 SM00862 Transcriptional regulatory protein, C terminal NA29_RS24750 SM00387 Histidine kinase-like ATPases NA29_RS24750 SM00388 His Kinase A (phosphoacceptor) domain NA29_RS24755 SM00387 Histidine kinase-like ATPases NA29_RS24760 SM00421 helix_turn_helix, Lux Regulon NA29_RS24760 SM00448 cheY-homologous receiver domain NA29_RS24825 SM00382 ATPases associated with a variety of cellular activities NA29_RS24885 SM00047 Lysozyme subfamily 2 NA29_RS24930 SM00858 NA29_RS24930 NA29_RS24965 SM00382 ATPases associated with a variety of cellular activities NA29_RS24965 SM00962 SRP54-type protein, GTPase domain NA29_RS24985 SM00448 cheY-homologous receiver domain NA29_RS24990 SM00448 cheY-homologous receiver domain NA29_RS25000 SM00138 Methyltransferase, chemotaxis proteins NA29_RS25005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS25005 SM01049 NA29_RS25005 NA29_RS25010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS25010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS25015 SM00091 PAS domain NA29_RS25015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NA29_RS25015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NA29_RS25020 SM00260 Two component signalling adaptor domain NA29_RS25025 SM00073 Histidine Phosphotransfer domain NA29_RS25025 SM00260 Two component signalling adaptor domain NA29_RS25025 SM00387 Histidine kinase-like ATPases NA29_RS25025 SM01231 NA29_RS25025 NA29_RS25030 SM00448 cheY-homologous receiver domain NA29_RS25070 SM00382 ATPases associated with a variety of cellular activities NA29_RS25115 SM00470 ParB-like nuclease domain NA29_RS25135 SM01228 NA29_RS25135 NA29_RS25140 SM00382 ATPases associated with a variety of cellular activities NA29_RS25145 SM00382 ATPases associated with a variety of cellular activities NA29_RS25155 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS25185 SM00382 ATPases associated with a variety of cellular activities NA29_RS25190 SM00382 ATPases associated with a variety of cellular activities NA29_RS25245 SM00344 helix_turn_helix ASNC type NA29_RS25270 SM00382 ATPases associated with a variety of cellular activities NA29_RS25290 SM01359 NA29_RS25290 NA29_RS25290 SM01360 NA29_RS25290 NA29_RS25300 SM00344 helix_turn_helix ASNC type NA29_RS25315 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain NA29_RS25320 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS25345 SM00347 helix_turn_helix multiple antibiotic resistance protein NA29_RS25350 SM00450 Rhodanese Homology Domain NA29_RS25405 SM01234 NA29_RS25405